MADS-box protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 52 |
| Acc36I | ACCTGC | 1 cut(s) | 52 |
| AccII | CGCG | 1 cut(s) | 312 |
| AciI | CCGC | 1 cut(s) | 310 |
| AclWI | GGATC | 1 cut(s) | 345 |
| AcoI | YGGCCR | 1 cut(s) | 400 |
| AfaI | GTAC | 2 cut(s) | 215, 546 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 695 |
| AgsI | TTSAA | 5 cut(s) | 97, 230, 367, 389, 455 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 381, 413 |
| AluBI | AGCT | 9 cut(s) | 104, 112, 169, 186, 262, 268, 467, 539, 618 |
| AluI | AGCT | 9 cut(s) | 104, 112, 169, 186, 262, 268, 467, 539, 618 |
| Alw21I | GWGCWC | 1 cut(s) | 264 |
| AlwI | GGATC | 1 cut(s) | 345 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 621 |
| AoxI | GGCC | 1 cut(s) | 400 |
| ApeKI | GCWGC | 3 cut(s) | 615, 618, 621 |
| AspLEI | GCGC | 2 cut(s) | 223, 626 |
| AsuHPI | GGTGA | 2 cut(s) | 76, 344 |
| AsuII | TTCGAA | 1 cut(s) | 74 |
| AsuNHI | GCTAGC | 1 cut(s) | 611 |
| BanII | GRGCYC | 1 cut(s) | 264 |
| Bbv12I | GWGCWC | 1 cut(s) | 264 |
| BbvI | GCAGC | 3 cut(s) | 605, 608, 627 |
| BccI | CCATC | 2 cut(s) | 259, 499 |
| BceAI | ACGGC | 1 cut(s) | 387 |
| BfaI | CTAG | 2 cut(s) | 612, 627 |
| BfuAI | ACCTGC | 1 cut(s) | 52 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 58 |
| BisI | GCNGC | 3 cut(s) | 616, 619, 622 |
| BlsI | GCNGC | 3 cut(s) | 617, 620, 623 |
| BmiI | GGNNCC | 1 cut(s) | 249 |
| BmsI | GCATC | 1 cut(s) | 285 |
| BmtI | GCTAGC | 1 cut(s) | 615 |
| BpmI | CTGGAG | 4 cut(s) | 126, 166, 172, 248 |
| Bpu10I | CCTNAGC | 1 cut(s) | 317 |
| Bpu14I | TTCGAA | 1 cut(s) | 74 |
| BpuEI | CTTGAG | 1 cut(s) | 278 |
| BsaBI | GATNNNNATC | 1 cut(s) | 29 |
| BsaJI | CCNNGG | 3 cut(s) | 417, 552, 694 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 695 |
| Bse118I | RCCGGY | 1 cut(s) | 52 |
| Bse1I | ACTGG | 1 cut(s) | 166 |
| Bse8I | GATNNNNATC | 1 cut(s) | 29 |
| BseDI | CCNNGG | 3 cut(s) | 417, 552, 694 |
| BseGI | GGATG | 3 cut(s) | 205, 364, 516 |
| BseJI | GATNNNNATC | 1 cut(s) | 29 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 695 |
| BseMII | CTCAG | 1 cut(s) | 459 |
| BseNI | ACTGG | 1 cut(s) | 166 |
| BseRI | GAGGAG | 1 cut(s) | 94 |
| BseXI | GCAGC | 3 cut(s) | 605, 608, 627 |
| Bsh1236I | CGCG | 1 cut(s) | 312 |
| BshFI | GGCC | 1 cut(s) | 402 |
| BsiHKAI | GWGCWC | 1 cut(s) | 264 |
| BsiSI | CCGG | 1 cut(s) | 53 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 695 |
| BsnI | GGCC | 1 cut(s) | 402 |
| Bsp119I | TTCGAA | 1 cut(s) | 74 |
| Bsp1286I | GDGCHC | 1 cut(s) | 264 |
| Bsp143I | GATC | 4 cut(s) | 30, 39, 271, 337 |
| BspACI | CCGC | 1 cut(s) | 310 |
| BspANI | GGCC | 1 cut(s) | 402 |
| BspCNI | CTCAG | 1 cut(s) | 460 |
| BspFNI | CGCG | 1 cut(s) | 312 |
| BspLI | GGNNCC | 1 cut(s) | 249 |
| BspMI | ACCTGC | 1 cut(s) | 52 |
| BspOI | GCTAGC | 1 cut(s) | 615 |
| BspPI | GGATC | 1 cut(s) | 345 |
| BspQI | GCTCTTC | 1 cut(s) | 176 |
| BspT104I | TTCGAA | 1 cut(s) | 74 |
| BsrFI | RCCGGY | 1 cut(s) | 52 |
| BsrI | ACTGG | 1 cut(s) | 166 |
| BssAI | RCCGGY | 1 cut(s) | 52 |
| BssECI | CCNNGG | 3 cut(s) | 417, 552, 694 |
| BssMI | GATC | 4 cut(s) | 30, 39, 271, 337 |
| BssT1I | CCWWGG | 2 cut(s) | 417, 552 |
| Bst4CI | ACNGT | 1 cut(s) | 695 |
| Bst6I | CTCTTC | 3 cut(s) | 71, 79, 176 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 621 |
| BstBI | TTCGAA | 1 cut(s) | 74 |
| BstC8I | GCNNGC | 3 cut(s) | 54, 314, 613 |
| BstDEI | CTNAG | 2 cut(s) | 317, 468 |
| BstDSI | CCRYGG | 1 cut(s) | 694 |
| BstF5I | GGATG | 3 cut(s) | 205, 364, 516 |
| BstFNI | CGCG | 1 cut(s) | 312 |
| BstHHI | GCGC | 2 cut(s) | 223, 626 |
| BstKTI | GATC | 4 cut(s) | 33, 42, 274, 340 |
| BstMBI | GATC | 4 cut(s) | 30, 39, 271, 337 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 58, 455, 464, 608, 621 |
| BstUI | CGCG | 1 cut(s) | 312 |
| BstV1I | GCAGC | 3 cut(s) | 605, 608, 627 |
| BstX2I | RGATCY | 1 cut(s) | 337 |
| BstYI | RGATCY | 1 cut(s) | 337 |
| BsuRI | GGCC | 1 cut(s) | 402 |
| BtgI | CCRYGG | 1 cut(s) | 694 |
| BtsCI | GGATG | 3 cut(s) | 205, 364, 516 |
| BveI | ACCTGC | 1 cut(s) | 52 |
| Cac8I | GCNNGC | 3 cut(s) | 54, 314, 613 |
| CaiI | CAGNNNCTG | 1 cut(s) | 621 |
| CfoI | GCGC | 2 cut(s) | 223, 626 |
| Cfr10I | RCCGGY | 1 cut(s) | 52 |
| Csp6I | GTAC | 2 cut(s) | 214, 545 |
| CviQI | GTAC | 2 cut(s) | 214, 545 |
| DdeI | CTNAG | 2 cut(s) | 317, 468 |
| DpnI | GATC | 4 cut(s) | 32, 41, 273, 339 |
| DpnII | GATC | 4 cut(s) | 30, 39, 271, 337 |
| EaeI | YGGCCR | 1 cut(s) | 400 |
| Eam1104I | CTCTTC | 3 cut(s) | 71, 79, 176 |
| EarI | CTCTTC | 3 cut(s) | 71, 79, 176 |
| Ecl136II | GAGCTC | 1 cut(s) | 262 |
| Eco130I | CCWWGG | 2 cut(s) | 417, 552 |
| Eco24I | GRGCYC | 1 cut(s) | 264 |
| Eco32I | GATATC | 2 cut(s) | 516, 565 |
| Eco53kI | GAGCTC | 1 cut(s) | 262 |
| EcoICRI | GAGCTC | 1 cut(s) | 262 |
| EcoRV | GATATC | 2 cut(s) | 516, 565 |
| EcoT14I | CCWWGG | 2 cut(s) | 417, 552 |
| EcoT38I | GRGCYC | 1 cut(s) | 264 |
| ErhI | CCWWGG | 2 cut(s) | 417, 552 |
| FaiI | YATR | 4 cut(s) | 138, 356, 434, 446 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 381, 413 |
| FauI | CCCGC | 1 cut(s) | 317 |
| Fnu4HI | GCNGC | 3 cut(s) | 616, 619, 622 |
| FokI | GGATG | 3 cut(s) | 212, 371, 523 |
| FriOI | GRGCYC | 1 cut(s) | 264 |
| Fsp4HI | GCNGC | 3 cut(s) | 616, 619, 622 |
| FspBI | CTAG | 2 cut(s) | 612, 627 |
| GlaI | GCGC | 2 cut(s) | 222, 625 |
| GluI | GCNGC | 3 cut(s) | 616, 619, 622 |
| GsuI | CTGGAG | 4 cut(s) | 126, 166, 172, 248 |
| HaeIII | GGCC | 1 cut(s) | 402 |
| HapII | CCGG | 1 cut(s) | 53 |
| HhaI | GCGC | 2 cut(s) | 223, 626 |
| Hin6I | GCGC | 2 cut(s) | 221, 624 |
| HinP1I | GCGC | 2 cut(s) | 221, 624 |
| HincII | GTYRAC | 1 cut(s) | 649 |
| HindII | GTYRAC | 1 cut(s) | 649 |
| HinfI | GANTC | 4 cut(s) | 176, 557, 596, 650 |
| HpaII | CCGG | 1 cut(s) | 53 |
| HphI | GGTGA | 2 cut(s) | 76, 344 |
| Hpy166II | GTNNAC | 2 cut(s) | 545, 649 |
| Hpy188I | TCNGA | 2 cut(s) | 562, 595 |
| Hpy188III | TCNNGA | 3 cut(s) | 34, 257, 341 |
| Hpy8I | GTNNAC | 2 cut(s) | 545, 649 |
| Hpy99I | CGWCG | 1 cut(s) | 16 |
| HpyAV | CCTTC | 3 cut(s) | 338, 383, 575 |
| HpyCH4III | ACNGT | 1 cut(s) | 695 |
| HpyCH4IV | ACGT | 1 cut(s) | 68 |
| HpyCH4V | TGCA | 3 cut(s) | 209, 299, 524 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 58, 455, 464, 608, 621 |
| HpyF3I | CTNAG | 2 cut(s) | 317, 468 |
| HpySE526I | ACGT | 1 cut(s) | 68 |
| HspAI | GCGC | 2 cut(s) | 221, 624 |
| KroI | GCCGGC | 1 cut(s) | 52 |
| KroNI | GCCGGC | 1 cut(s) | 54 |
| Kzo9I | GATC | 4 cut(s) | 30, 39, 271, 337 |
| LguI | GCTCTTC | 1 cut(s) | 176 |
| LmnI | GCTCC | 5 cut(s) | 191, 247, 267, 376, 464 |
| Lsp1109I | GCAGC | 3 cut(s) | 605, 608, 627 |
| LweI | GCATC | 1 cut(s) | 285 |
| MaeI | CTAG | 2 cut(s) | 612, 627 |
| MaeII | ACGT | 1 cut(s) | 68 |
| MaeIII | GTNAC | 1 cut(s) | 64 |
| MalI | GATC | 4 cut(s) | 32, 41, 273, 339 |
| MboI | GATC | 4 cut(s) | 30, 39, 271, 337 |
| MflI | RGATCY | 1 cut(s) | 337 |
| MhlI | GDGCHC | 1 cut(s) | 264 |
| MluCI | AATT | 2 cut(s) | 362, 371 |
| MlyI | GAGTC | 3 cut(s) | 185, 566, 644 |
| MmeI | TCCRAC | 3 cut(s) | 225, 456, 540 |
| MnlI | CCTC | 7 cut(s) | 9, 51, 72, 80, 190, 328, 386 |
| MroNI | GCCGGC | 1 cut(s) | 52 |
| MseI | TTAA | 1 cut(s) | 494 |
| MspA1I | CMGCKG | 1 cut(s) | 618 |
| MspI | CCGG | 1 cut(s) | 53 |
| MvnI | CGCG | 1 cut(s) | 312 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 58, 455, 464, 608, 621 |
| NaeI | GCCGGC | 1 cut(s) | 54 |
| NdeII | GATC | 4 cut(s) | 30, 39, 271, 337 |
| NgoMIV | GCCGGC | 1 cut(s) | 52 |
| NheI | GCTAGC | 1 cut(s) | 611 |
| NlaIV | GGNNCC | 1 cut(s) | 249 |
| NmuCI | GTSAC | 1 cut(s) | 64 |
| NspV | TTCGAA | 1 cut(s) | 74 |
| PaqCI | CACCTGC | 1 cut(s) | 52 |
| PciSI | GCTCTTC | 1 cut(s) | 176 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 11 |
| PdiI | GCCGGC | 1 cut(s) | 54 |
| PfeI | GAWTC | 1 cut(s) | 596 |
| PkrI | GCNGC | 3 cut(s) | 617, 620, 623 |
| PleI | GAGTC | 3 cut(s) | 184, 565, 644 |
| PpsI | GAGTC | 3 cut(s) | 184, 565, 644 |
| Psp124BI | GAGCTC | 1 cut(s) | 264 |
| PspN4I | GGNNCC | 1 cut(s) | 249 |
| PstNI | CAGNNNCTG | 1 cut(s) | 621 |
| PsuI | RGATCY | 1 cut(s) | 337 |
| PvuII | CAGCTG | 1 cut(s) | 618 |
| RsaI | GTAC | 2 cut(s) | 215, 546 |
| RsaNI | GTAC | 2 cut(s) | 214, 545 |
| SacI | GAGCTC | 1 cut(s) | 264 |
| SapI | GCTCTTC | 1 cut(s) | 176 |
| SaqAI | TTAA | 1 cut(s) | 494 |
| SatI | GCNGC | 3 cut(s) | 616, 619, 622 |
| Sau3AI | GATC | 4 cut(s) | 30, 39, 271, 337 |
| SchI | GAGTC | 3 cut(s) | 185, 566, 644 |
| SduI | GDGCHC | 1 cut(s) | 264 |
| SfaNI | GCATC | 1 cut(s) | 285 |
| SfuI | TTCGAA | 1 cut(s) | 74 |
| SmlI | CTYRAG | 1 cut(s) | 257 |
| SmoI | CTYRAG | 1 cut(s) | 257 |
| Sse9I | AATT | 2 cut(s) | 362, 371 |
| SsiI | CCGC | 1 cut(s) | 310 |
| SspMI | CTAG | 2 cut(s) | 612, 627 |
| SstI | GAGCTC | 1 cut(s) | 264 |
| StyI | CCWWGG | 2 cut(s) | 417, 552 |
| TaaI | ACNGT | 1 cut(s) | 695 |
| TaiI | ACGT | 1 cut(s) | 71 |
| TaqI | TCGA | 4 cut(s) | 5, 42, 74, 174 |
| TasI | AATT | 2 cut(s) | 362, 371 |
| TatI | WGTACW | 1 cut(s) | 544 |
| TfiI | GAWTC | 1 cut(s) | 596 |
| Tru1I | TTAA | 1 cut(s) | 494 |
| Tru9I | TTAA | 1 cut(s) | 494 |
| TseFI | GTSAC | 1 cut(s) | 64 |
| TseI | GCWGC | 3 cut(s) | 615, 618, 621 |
| Tsp45I | GTSAC | 1 cut(s) | 64 |
| TspDTI | ATGAA | 2 cut(s) | 341, 375 |
| XspI | CTAG | 2 cut(s) | 612, 627 |