MADS-box protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 108 |
| AclWI | GGATC | 5 cut(s) | 70, 83, 113, 119, 126 |
| AcoI | YGGCCR | 2 cut(s) | 269, 289 |
| AcsI | RAATTY | 2 cut(s) | 81, 427 |
| AcyI | GRCGYC | 1 cut(s) | 331 |
| AdeI | CACNNNGTG | 1 cut(s) | 355 |
| AfaI | GTAC | 1 cut(s) | 539 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 85, 115, 291 |
| AgsI | TTSAA | 1 cut(s) | 104 |
| AjnI | CCWGG | 1 cut(s) | 17 |
| AluBI | AGCT | 2 cut(s) | 130, 338 |
| AluI | AGCT | 2 cut(s) | 130, 338 |
| Alw26I | GTCTC | 2 cut(s) | 118, 216 |
| AlwI | GGATC | 5 cut(s) | 70, 83, 113, 119, 126 |
| Ama87I | CYCGRG | 1 cut(s) | 91 |
| Aor13HI | TCCGGA | 1 cut(s) | 108 |
| AoxI | GGCC | 5 cut(s) | 15, 21, 64, 269, 289 |
| ApoI | RAATTY | 2 cut(s) | 81, 427 |
| AspS9I | GGNCC | 3 cut(s) | 15, 21, 88 |
| AsuC2I | CCSGG | 2 cut(s) | 92, 93 |
| AvaI | CYCGRG | 1 cut(s) | 91 |
| AvaII | GGWCC | 1 cut(s) | 88 |
| BalI | TGGCCA | 1 cut(s) | 271 |
| BamHI | GGATCC | 2 cut(s) | 75, 118 |
| BanII | GRGCYC | 1 cut(s) | 196 |
| BccI | CCATC | 1 cut(s) | 364 |
| BceAI | ACGGC | 1 cut(s) | 423 |
| BciT130I | CCWGG | 1 cut(s) | 19 |
| BcnI | CCSGG | 2 cut(s) | 92, 93 |
| BcoDI | GTCTC | 2 cut(s) | 118, 216 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 268 |
| Bme1390I | CCNGG | 3 cut(s) | 19, 92, 93 |
| Bme18I | GGWCC | 1 cut(s) | 88 |
| BmeT110I | CYCGRG | 1 cut(s) | 91 |
| BmgT120I | GGNCC | 3 cut(s) | 15, 21, 88 |
| BmiI | GGNNCC | 5 cut(s) | 77, 89, 90, 120, 195 |
| BmrFI | CCNGG | 3 cut(s) | 19, 92, 93 |
| BmsI | GCATC | 3 cut(s) | 477, 508, 555 |
| BoxI | GACNNNNGTC | 1 cut(s) | 93 |
| BpuMI | CCSGG | 2 cut(s) | 92, 93 |
| BsaBI | GATNNNNATC | 1 cut(s) | 74 |
| BsaHI | GRCGYC | 1 cut(s) | 331 |
| BsaI | GGTCTC | 1 cut(s) | 216 |
| BsaJI | CCNNGG | 4 cut(s) | 18, 39, 91, 286 |
| BsaWI | WCCGGW | 1 cut(s) | 108 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 85, 115, 291 |
| Bse118I | RCCGGY | 1 cut(s) | 291 |
| Bse8I | GATNNNNATC | 1 cut(s) | 74 |
| BseAI | TCCGGA | 1 cut(s) | 108 |
| BseBI | CCWGG | 1 cut(s) | 19 |
| BseDI | CCNNGG | 4 cut(s) | 18, 39, 91, 286 |
| BseJI | GATNNNNATC | 1 cut(s) | 74 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 85, 115, 291 |
| BseRI | GAGGAG | 1 cut(s) | 186 |
| BshFI | GGCC | 5 cut(s) | 17, 23, 66, 271, 291 |
| BsiHKCI | CYCGRG | 1 cut(s) | 91 |
| BsiSI | CCGG | 4 cut(s) | 67, 92, 109, 292 |
| BslFI | GGGAC | 1 cut(s) | 101 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 85, 115, 291 |
| BsmAI | GTCTC | 2 cut(s) | 118, 216 |
| BsmFI | GGGAC | 1 cut(s) | 101 |
| BsnI | GGCC | 5 cut(s) | 17, 23, 66, 271, 291 |
| Bso31I | GGTCTC | 1 cut(s) | 216 |
| BsoBI | CYCGRG | 1 cut(s) | 91 |
| Bsp1286I | GDGCHC | 1 cut(s) | 196 |
| Bsp13I | TCCGGA | 1 cut(s) | 108 |
| Bsp143I | GATC | 6 cut(s) | 75, 111, 118, 169, 253, 299 |
| BspANI | GGCC | 5 cut(s) | 17, 23, 66, 271, 291 |
| BspEI | TCCGGA | 1 cut(s) | 108 |
| BspLI | GGNNCC | 5 cut(s) | 77, 89, 90, 120, 195 |
| BspPI | GGATC | 5 cut(s) | 70, 83, 113, 119, 126 |
| BspTNI | GGTCTC | 1 cut(s) | 216 |
| BsrFI | RCCGGY | 1 cut(s) | 291 |
| BssAI | RCCGGY | 1 cut(s) | 291 |
| BssECI | CCNNGG | 4 cut(s) | 18, 39, 91, 286 |
| BssMI | GATC | 6 cut(s) | 75, 111, 118, 169, 253, 299 |
| BssNI | GRCGYC | 1 cut(s) | 331 |
| BssT1I | CCWWGG | 1 cut(s) | 286 |
| Bst2UI | CCWGG | 1 cut(s) | 19 |
| BstACI | GRCGYC | 1 cut(s) | 331 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 496 |
| BstC8I | GCNNGC | 1 cut(s) | 293 |
| BstKTI | GATC | 6 cut(s) | 78, 114, 121, 172, 256, 302 |
| BstMAI | GTCTC | 2 cut(s) | 118, 216 |
| BstMBI | GATC | 6 cut(s) | 75, 111, 118, 169, 253, 299 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 268, 431, 496 |
| BstNI | CCWGG | 1 cut(s) | 19 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 93 |
| BstSCI | CCNGG | 3 cut(s) | 17, 90, 91 |
| BstX2I | RGATCY | 3 cut(s) | 75, 111, 118 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 234 |
| BstYI | RGATCY | 3 cut(s) | 75, 111, 118 |
| BsuRI | GGCC | 5 cut(s) | 17, 23, 66, 271, 291 |
| Cac8I | GCNNGC | 1 cut(s) | 293 |
| Cfr10I | RCCGGY | 1 cut(s) | 291 |
| Cfr13I | GGNCC | 3 cut(s) | 15, 21, 88 |
| Cfr9I | CCCGGG | 1 cut(s) | 91 |
| CseI | GACGC | 1 cut(s) | 339 |
| Csp6I | GTAC | 1 cut(s) | 538 |
| CviAII | CATG | 3 cut(s) | 267, 273, 436 |
| CviQI | GTAC | 1 cut(s) | 538 |
| DpnI | GATC | 6 cut(s) | 77, 113, 120, 171, 255, 301 |
| DpnII | GATC | 6 cut(s) | 75, 111, 118, 169, 253, 299 |
| DraIII | CACNNNGTG | 1 cut(s) | 355 |
| EaeI | YGGCCR | 2 cut(s) | 269, 289 |
| Eco130I | CCWWGG | 1 cut(s) | 286 |
| Eco24I | GRGCYC | 1 cut(s) | 196 |
| Eco31I | GGTCTC | 1 cut(s) | 216 |
| Eco47I | GGWCC | 1 cut(s) | 88 |
| Eco88I | CYCGRG | 1 cut(s) | 91 |
| EcoO109I | RGGNCCY | 1 cut(s) | 88 |
| EcoRII | CCWGG | 1 cut(s) | 17 |
| EcoT14I | CCWWGG | 1 cut(s) | 286 |
| EcoT38I | GRGCYC | 1 cut(s) | 196 |
| ErhI | CCWWGG | 1 cut(s) | 286 |
| FaeI | CATG | 3 cut(s) | 270, 276, 439 |
| FaiI | YATR | 6 cut(s) | 137, 268, 274, 437, 480, 482 |
| FaqI | GGGAC | 1 cut(s) | 101 |
| FatI | CATG | 3 cut(s) | 266, 272, 435 |
| FriOI | GRGCYC | 1 cut(s) | 196 |
| HaeIII | GGCC | 5 cut(s) | 17, 23, 66, 271, 291 |
| HapII | CCGG | 4 cut(s) | 67, 92, 109, 292 |
| HgaI | GACGC | 1 cut(s) | 339 |
| Hin1I | GRCGYC | 1 cut(s) | 331 |
| Hin1II | CATG | 3 cut(s) | 270, 276, 439 |
| HinfI | GANTC | 2 cut(s) | 59, 217 |
| HpaII | CCGG | 4 cut(s) | 67, 92, 109, 292 |
| Hpy188I | TCNGA | 4 cut(s) | 80, 123, 280, 329 |
| Hpy188III | TCNNGA | 3 cut(s) | 109, 221, 247 |
| Hpy99I | CGWCG | 1 cut(s) | 333 |
| HpyAV | CCTTC | 1 cut(s) | 330 |
| HpyCH4V | TGCA | 4 cut(s) | 425, 490, 499, 546 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 268, 431, 496 |
| Hsp92I | GRCGYC | 1 cut(s) | 331 |
| Hsp92II | CATG | 3 cut(s) | 270, 276, 439 |
| KflI | GGGWCCC | 1 cut(s) | 88 |
| Kpn2I | TCCGGA | 1 cut(s) | 108 |
| KroI | GCCGGC | 1 cut(s) | 291 |
| KroNI | GCCGGC | 1 cut(s) | 293 |
| Kzo9I | GATC | 6 cut(s) | 75, 111, 118, 169, 253, 299 |
| LmnI | GCTCC | 1 cut(s) | 199 |
| LpnPI | CCDG | 8 cut(s) | 4, 31, 48, 80, 105, 122, 142, 305 |
| LweI | GCATC | 3 cut(s) | 477, 508, 555 |
| MaeIII | GTNAC | 1 cut(s) | 347 |
| MalI | GATC | 6 cut(s) | 77, 113, 120, 171, 255, 301 |
| MboI | GATC | 6 cut(s) | 75, 111, 118, 169, 253, 299 |
| MboII | GAAGA | 1 cut(s) | 464 |
| MflI | RGATCY | 3 cut(s) | 75, 111, 118 |
| MhlI | GDGCHC | 1 cut(s) | 196 |
| MlsI | TGGCCA | 1 cut(s) | 271 |
| MluCI | AATT | 3 cut(s) | 81, 396, 427 |
| MluNI | TGGCCA | 1 cut(s) | 271 |
| MmeI | TCCRAC | 2 cut(s) | 341, 352 |
| MnlI | CCTC | 2 cut(s) | 49, 207 |
| Mox20I | TGGCCA | 1 cut(s) | 271 |
| MroI | TCCGGA | 1 cut(s) | 108 |
| MroNI | GCCGGC | 1 cut(s) | 291 |
| MscI | TGGCCA | 1 cut(s) | 271 |
| MseI | TTAA | 1 cut(s) | 8 |
| MslI | CAYNNNNRTG | 1 cut(s) | 271 |
| Msp20I | TGGCCA | 1 cut(s) | 271 |
| MspI | CCGG | 4 cut(s) | 67, 92, 109, 292 |
| MspR9I | CCNGG | 3 cut(s) | 19, 92, 93 |
| MvaI | CCWGG | 1 cut(s) | 19 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 268, 431, 496 |
| NaeI | GCCGGC | 1 cut(s) | 293 |
| NciI | CCSGG | 2 cut(s) | 92, 93 |
| NdeII | GATC | 6 cut(s) | 75, 111, 118, 169, 253, 299 |
| NgoMIV | GCCGGC | 1 cut(s) | 291 |
| NlaIII | CATG | 3 cut(s) | 270, 276, 439 |
| NlaIV | GGNNCC | 5 cut(s) | 77, 89, 90, 120, 195 |
| NmeAIII | GCCGAG | 1 cut(s) | 20 |
| NmuCI | GTSAC | 1 cut(s) | 347 |
| PdiI | GCCGGC | 1 cut(s) | 293 |
| PfeI | GAWTC | 2 cut(s) | 59, 217 |
| PpuMI | RGGWCCY | 1 cut(s) | 88 |
| PshAI | GACNNNNGTC | 1 cut(s) | 93 |
| Psp5II | RGGWCCY | 1 cut(s) | 88 |
| Psp6I | CCWGG | 1 cut(s) | 17 |
| PspGI | CCWGG | 1 cut(s) | 17 |
| PspN4I | GGNNCC | 5 cut(s) | 77, 89, 90, 120, 195 |
| PspPI | GGNCC | 3 cut(s) | 15, 21, 88 |
| PspPPI | RGGWCCY | 1 cut(s) | 88 |
| PsuI | RGATCY | 3 cut(s) | 75, 111, 118 |
| RsaI | GTAC | 1 cut(s) | 539 |
| RsaNI | GTAC | 1 cut(s) | 538 |
| RseI | CAYNNNNRTG | 1 cut(s) | 271 |
| SaqAI | TTAA | 1 cut(s) | 8 |
| Sau3AI | GATC | 6 cut(s) | 75, 111, 118, 169, 253, 299 |
| Sau96I | GGNCC | 3 cut(s) | 15, 21, 88 |
| ScrFI | CCNGG | 3 cut(s) | 19, 92, 93 |
| SduI | GDGCHC | 1 cut(s) | 196 |
| SetI | ASST | 3 cut(s) | 132, 310, 340 |
| SfaNI | GCATC | 3 cut(s) | 477, 508, 555 |
| SinI | GGWCC | 1 cut(s) | 88 |
| SmaI | CCCGGG | 1 cut(s) | 93 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 271 |
| Sse9I | AATT | 3 cut(s) | 81, 396, 427 |
| StyD4I | CCNGG | 3 cut(s) | 17, 90, 91 |
| StyI | CCWWGG | 1 cut(s) | 286 |
| TaqI | TCGA | 3 cut(s) | 220, 298, 368 |
| TasI | AATT | 3 cut(s) | 81, 396, 427 |
| TatI | WGTACW | 1 cut(s) | 537 |
| TfiI | GAWTC | 2 cut(s) | 59, 217 |
| Tru1I | TTAA | 1 cut(s) | 8 |
| Tru9I | TTAA | 1 cut(s) | 8 |
| TseFI | GTSAC | 1 cut(s) | 347 |
| Tsp45I | GTSAC | 1 cut(s) | 347 |
| TspDTI | ATGAA | 1 cut(s) | 312 |
| TspMI | CCCGGG | 1 cut(s) | 91 |
| VpaK11BI | GGWCC | 1 cut(s) | 88 |
| XapI | RAATTY | 2 cut(s) | 81, 427 |
| XmaI | CCCGGG | 1 cut(s) | 91 |