MADS-box protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 37 |
| Acc36I | ACCTGC | 2 cut(s) | 37, 42 |
| AciI | CCGC | 3 cut(s) | 296, 319, 615 |
| AclWI | GGATC | 2 cut(s) | 298, 342 |
| AcuI | CTGAAG | 1 cut(s) | 231 |
| AfaI | GTAC | 2 cut(s) | 178, 200 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 707 |
| AgsI | TTSAA | 6 cut(s) | 60, 82, 283, 386, 410, 452 |
| AluBI | AGCT | 5 cut(s) | 154, 171, 250, 256, 346 |
| AluI | AGCT | 5 cut(s) | 154, 171, 250, 256, 346 |
| Alw21I | GWGCWC | 1 cut(s) | 252 |
| Alw26I | GTCTC | 1 cut(s) | 61 |
| AlwI | GGATC | 2 cut(s) | 298, 342 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 442 |
| Ama87I | CYCGRG | 1 cut(s) | 308 |
| ApeKI | GCWGC | 2 cut(s) | 235, 621 |
| AseI | ATTAAT | 1 cut(s) | 264 |
| AsuHPI | GGTGA | 1 cut(s) | 61 |
| AvaI | CYCGRG | 1 cut(s) | 308 |
| BanII | GRGCYC | 1 cut(s) | 252 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 622, 654 |
| Bbv12I | GWGCWC | 1 cut(s) | 252 |
| BbvCI | CCTCAGC | 1 cut(s) | 117 |
| BbvI | GCAGC | 2 cut(s) | 247, 608 |
| BccI | CCATC | 2 cut(s) | 316, 521 |
| BceAI | ACGGC | 1 cut(s) | 384 |
| BcoDI | GTCTC | 1 cut(s) | 61 |
| BfmI | CTRYAG | 1 cut(s) | 625 |
| BfuAI | ACCTGC | 2 cut(s) | 37, 42 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 43 |
| BglII | AGATCT | 1 cut(s) | 567 |
| BisI | GCNGC | 2 cut(s) | 236, 622 |
| BlsI | GCNGC | 2 cut(s) | 237, 623 |
| BmeT110I | CYCGRG | 1 cut(s) | 308 |
| BmiI | GGNNCC | 1 cut(s) | 613 |
| BmsI | GCATC | 2 cut(s) | 507, 602 |
| BpmI | CTGGAG | 4 cut(s) | 151, 157, 236, 278 |
| Bpu10I | CCTNAGC | 2 cut(s) | 117, 246 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 707 |
| Bse118I | RCCGGY | 2 cut(s) | 37, 617 |
| Bse1I | ACTGG | 3 cut(s) | 151, 174, 547 |
| Bse3DI | GCAATG | 1 cut(s) | 189 |
| BseGI | GGATG | 3 cut(s) | 190, 327, 522 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 707 |
| BseMI | GCAATG | 1 cut(s) | 189 |
| BseMII | CTCAG | 3 cut(s) | 108, 237, 409 |
| BseNI | ACTGG | 3 cut(s) | 151, 174, 547 |
| BseRI | GAGGAG | 2 cut(s) | 79, 655 |
| BseXI | GCAGC | 2 cut(s) | 247, 608 |
| BsiHKAI | GWGCWC | 1 cut(s) | 252 |
| BsiHKCI | CYCGRG | 1 cut(s) | 308 |
| BsiSI | CCGG | 3 cut(s) | 38, 90, 618 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 707 |
| BsmAI | GTCTC | 1 cut(s) | 61 |
| BsmI | GAATGC | 1 cut(s) | 209 |
| BsoBI | CYCGRG | 1 cut(s) | 308 |
| Bsp1286I | GDGCHC | 1 cut(s) | 252 |
| Bsp143I | GATC | 3 cut(s) | 303, 334, 567 |
| BspACI | CCGC | 3 cut(s) | 296, 319, 615 |
| BspCNI | CTCAG | 3 cut(s) | 109, 238, 408 |
| BspLI | GGNNCC | 1 cut(s) | 613 |
| BspMI | ACCTGC | 2 cut(s) | 37, 42 |
| BspPI | GGATC | 2 cut(s) | 298, 342 |
| BspQI | GCTCTTC | 1 cut(s) | 336 |
| BsrDI | GCAATG | 1 cut(s) | 189 |
| BsrFI | RCCGGY | 2 cut(s) | 37, 617 |
| BsrI | ACTGG | 3 cut(s) | 151, 174, 547 |
| BssAI | RCCGGY | 2 cut(s) | 37, 617 |
| BssMI | GATC | 3 cut(s) | 303, 334, 567 |
| Bst4CI | ACNGT | 1 cut(s) | 629 |
| Bst6I | CTCTTC | 1 cut(s) | 336 |
| BstC8I | GCNNGC | 3 cut(s) | 39, 152, 619 |
| BstDEI | CTNAG | 4 cut(s) | 117, 246, 395, 414 |
| BstF5I | GGATG | 3 cut(s) | 190, 327, 522 |
| BstKTI | GATC | 3 cut(s) | 306, 337, 570 |
| BstMAI | GTCTC | 1 cut(s) | 61 |
| BstMBI | GATC | 3 cut(s) | 303, 334, 567 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 43, 122 |
| BstSFI | CTRYAG | 1 cut(s) | 625 |
| BstV1I | GCAGC | 2 cut(s) | 247, 608 |
| BstX2I | RGATCY | 3 cut(s) | 303, 334, 567 |
| BstYI | RGATCY | 3 cut(s) | 303, 334, 567 |
| BtsCI | GGATG | 3 cut(s) | 190, 327, 522 |
| BtsIMutI | CAGTG | 1 cut(s) | 207 |
| BveI | ACCTGC | 2 cut(s) | 37, 42 |
| Cac8I | GCNNGC | 3 cut(s) | 39, 152, 619 |
| CaiI | CAGNNNCTG | 1 cut(s) | 442 |
| Cfr10I | RCCGGY | 2 cut(s) | 37, 617 |
| CseI | GACGC | 1 cut(s) | 122 |
| Csp6I | GTAC | 2 cut(s) | 177, 199 |
| CviAII | CATG | 1 cut(s) | 274 |
| CviQI | GTAC | 2 cut(s) | 177, 199 |
| DdeI | CTNAG | 4 cut(s) | 117, 246, 395, 414 |
| DpnI | GATC | 3 cut(s) | 305, 336, 569 |
| DpnII | GATC | 3 cut(s) | 303, 334, 567 |
| Eam1104I | CTCTTC | 1 cut(s) | 336 |
| EarI | CTCTTC | 1 cut(s) | 336 |
| EciI | GGCGGA | 2 cut(s) | 334, 604 |
| Ecl136II | GAGCTC | 1 cut(s) | 250 |
| Eco24I | GRGCYC | 1 cut(s) | 252 |
| Eco53kI | GAGCTC | 1 cut(s) | 250 |
| Eco57I | CTGAAG | 1 cut(s) | 231 |
| Eco88I | CYCGRG | 1 cut(s) | 308 |
| EcoICRI | GAGCTC | 1 cut(s) | 250 |
| EcoT38I | GRGCYC | 1 cut(s) | 252 |
| FaeI | CATG | 1 cut(s) | 277 |
| FaiI | YATR | 5 cut(s) | 159, 275, 353, 431, 590 |
| FatI | CATG | 1 cut(s) | 273 |
| Fnu4HI | GCNGC | 2 cut(s) | 236, 622 |
| FokI | GGATG | 3 cut(s) | 197, 334, 529 |
| FriOI | GRGCYC | 1 cut(s) | 252 |
| Fsp4HI | GCNGC | 2 cut(s) | 236, 622 |
| GluI | GCNGC | 2 cut(s) | 236, 622 |
| GsuI | CTGGAG | 4 cut(s) | 151, 157, 236, 278 |
| HapII | CCGG | 3 cut(s) | 38, 90, 618 |
| HgaI | GACGC | 1 cut(s) | 122 |
| Hin1II | CATG | 1 cut(s) | 277 |
| HincII | GTYRAC | 1 cut(s) | 471 |
| HindII | GTYRAC | 1 cut(s) | 471 |
| HinfI | GANTC | 7 cut(s) | 161, 393, 433, 439, 560, 599, 662 |
| HpaII | CCGG | 3 cut(s) | 38, 90, 618 |
| HphI | GGTGA | 1 cut(s) | 61 |
| Hpy166II | GTNNAC | 1 cut(s) | 471 |
| Hpy188I | TCNGA | 5 cut(s) | 438, 526, 565, 598, 670 |
| Hpy188III | TCNNGA | 3 cut(s) | 82, 245, 338 |
| Hpy8I | GTNNAC | 1 cut(s) | 471 |
| Hpy99I | CGWCG | 1 cut(s) | 116 |
| HpyAV | CCTTC | 3 cut(s) | 175, 380, 578 |
| HpyCH4III | ACNGT | 1 cut(s) | 629 |
| HpyCH4IV | ACGT | 1 cut(s) | 53 |
| HpyCH4V | TGCA | 4 cut(s) | 194, 207, 273, 364 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 43, 122 |
| HpyF3I | CTNAG | 4 cut(s) | 117, 246, 395, 414 |
| HpySE526I | ACGT | 1 cut(s) | 53 |
| Hsp92II | CATG | 1 cut(s) | 277 |
| KroI | GCCGGC | 2 cut(s) | 37, 617 |
| KroNI | GCCGGC | 2 cut(s) | 39, 619 |
| Kzo9I | GATC | 3 cut(s) | 303, 334, 567 |
| LguI | GCTCTTC | 1 cut(s) | 336 |
| LmnI | GCTCC | 4 cut(s) | 92, 176, 255, 461 |
| Lsp1109I | GCAGC | 2 cut(s) | 247, 608 |
| LweI | GCATC | 2 cut(s) | 507, 602 |
| MaeII | ACGT | 1 cut(s) | 53 |
| MaeIII | GTNAC | 1 cut(s) | 49 |
| MalI | GATC | 3 cut(s) | 305, 336, 569 |
| MboI | GATC | 3 cut(s) | 303, 334, 567 |
| MboII | GAAGA | 7 cut(s) | 34, 132, 224, 353, 593, 630, 639 |
| MfeI | CAATTG | 1 cut(s) | 573 |
| MflI | RGATCY | 3 cut(s) | 303, 334, 567 |
| MhlI | GDGCHC | 1 cut(s) | 252 |
| MluCI | AATT | 3 cut(s) | 359, 488, 573 |
| MlyI | GAGTC | 5 cut(s) | 170, 387, 442, 569, 656 |
| MmeI | TCCRAC | 1 cut(s) | 543 |
| MroNI | GCCGGC | 2 cut(s) | 37, 617 |
| MseI | TTAA | 2 cut(s) | 264, 491 |
| MspA1I | CMGCKG | 1 cut(s) | 256 |
| MspI | CCGG | 3 cut(s) | 38, 90, 618 |
| MunI | CAATTG | 1 cut(s) | 573 |
| Mva1269I | GAATGC | 1 cut(s) | 209 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 43, 122 |
| NaeI | GCCGGC | 2 cut(s) | 39, 619 |
| NdeII | GATC | 3 cut(s) | 303, 334, 567 |
| NgoMIV | GCCGGC | 2 cut(s) | 37, 617 |
| NlaIII | CATG | 1 cut(s) | 277 |
| NlaIV | GGNNCC | 1 cut(s) | 613 |
| NmuCI | GTSAC | 1 cut(s) | 49 |
| PaeR7I | CTCGAG | 1 cut(s) | 308 |
| PaqCI | CACCTGC | 1 cut(s) | 37 |
| PciSI | GCTCTTC | 1 cut(s) | 336 |
| PctI | GAATGC | 1 cut(s) | 209 |
| PdiI | GCCGGC | 2 cut(s) | 39, 619 |
| PfeI | GAWTC | 2 cut(s) | 439, 599 |
| PkrI | GCNGC | 2 cut(s) | 237, 623 |
| PleI | GAGTC | 5 cut(s) | 169, 387, 441, 568, 656 |
| PpsI | GAGTC | 5 cut(s) | 169, 387, 441, 568, 656 |
| PshBI | ATTAAT | 1 cut(s) | 264 |
| Psp124BI | GAGCTC | 1 cut(s) | 252 |
| PspN4I | GGNNCC | 1 cut(s) | 613 |
| PspXI | VCTCGAGB | 1 cut(s) | 308 |
| PstNI | CAGNNNCTG | 1 cut(s) | 442 |
| PsuI | RGATCY | 3 cut(s) | 303, 334, 567 |
| PvuII | CAGCTG | 1 cut(s) | 256 |
| RsaI | GTAC | 2 cut(s) | 178, 200 |
| RsaNI | GTAC | 2 cut(s) | 177, 199 |
| SacI | GAGCTC | 1 cut(s) | 252 |
| SapI | GCTCTTC | 1 cut(s) | 336 |
| SaqAI | TTAA | 2 cut(s) | 264, 491 |
| SatI | GCNGC | 2 cut(s) | 236, 622 |
| Sau3AI | GATC | 3 cut(s) | 303, 334, 567 |
| SchI | GAGTC | 5 cut(s) | 170, 387, 442, 569, 656 |
| SduI | GDGCHC | 1 cut(s) | 252 |
| SfaNI | GCATC | 2 cut(s) | 507, 602 |
| SfcI | CTRYAG | 1 cut(s) | 625 |
| Sfr274I | CTCGAG | 1 cut(s) | 308 |
| SlaI | CTCGAG | 1 cut(s) | 308 |
| SmlI | CTYRAG | 1 cut(s) | 308 |
| SmoI | CTYRAG | 1 cut(s) | 308 |
| Sse9I | AATT | 3 cut(s) | 359, 488, 573 |
| SsiI | CCGC | 3 cut(s) | 296, 319, 615 |
| SstI | GAGCTC | 1 cut(s) | 252 |
| TaaI | ACNGT | 1 cut(s) | 629 |
| TaiI | ACGT | 1 cut(s) | 56 |
| TaqI | TCGA | 3 cut(s) | 309, 339, 641 |
| TasI | AATT | 3 cut(s) | 359, 488, 573 |
| TfiI | GAWTC | 2 cut(s) | 439, 599 |
| Tru1I | TTAA | 2 cut(s) | 264, 491 |
| Tru9I | TTAA | 2 cut(s) | 264, 491 |
| TscAI | CASTG | 1 cut(s) | 214 |
| TseFI | GTSAC | 1 cut(s) | 49 |
| TseI | GCWGC | 2 cut(s) | 235, 621 |
| Tsp45I | GTSAC | 1 cut(s) | 49 |
| TspDTI | ATGAA | 3 cut(s) | 17, 372, 594 |
| TspRI | CASTG | 1 cut(s) | 214 |
| VspI | ATTAAT | 1 cut(s) | 264 |
| XhoI | CTCGAG | 1 cut(s) | 308 |