MADS-box protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 49 |
| Acc36I | ACCTGC | 1 cut(s) | 49 |
| AccB1I | GGYRCC | 1 cut(s) | 638 |
| AccBSI | CCGCTC | 1 cut(s) | 309 |
| AccII | CGCG | 1 cut(s) | 482 |
| AciI | CCGC | 1 cut(s) | 309 |
| AclWI | GGATC | 1 cut(s) | 345 |
| AcoI | YGGCCR | 1 cut(s) | 248 |
| AcuI | CTGAAG | 1 cut(s) | 579 |
| AfaI | GTAC | 1 cut(s) | 190 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 677 |
| AgsI | TTSAA | 4 cut(s) | 94, 227, 389, 609 |
| AluBI | AGCT | 7 cut(s) | 101, 109, 166, 183, 262, 467, 600 |
| AluI | AGCT | 7 cut(s) | 101, 109, 166, 183, 262, 467, 600 |
| Alw21I | GWGCWC | 1 cut(s) | 264 |
| AlwI | GGATC | 1 cut(s) | 345 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 600 |
| Ama87I | CYCGRG | 1 cut(s) | 263 |
| AoxI | GGCC | 1 cut(s) | 248 |
| ApeKI | GCWGC | 2 cut(s) | 597, 600 |
| AspS9I | GGNCC | 1 cut(s) | 244 |
| AsuHPI | GGTGA | 2 cut(s) | 73, 523 |
| AsuII | TTCGAA | 1 cut(s) | 71 |
| AvaI | CYCGRG | 1 cut(s) | 263 |
| AvaII | GGWCC | 1 cut(s) | 244 |
| BanI | GGYRCC | 1 cut(s) | 638 |
| BanII | GRGCYC | 1 cut(s) | 264 |
| Bbv12I | GWGCWC | 1 cut(s) | 264 |
| BbvI | GCAGC | 2 cut(s) | 587, 609 |
| BccI | CCATC | 2 cut(s) | 259, 469 |
| BclI | TGATCA | 1 cut(s) | 628 |
| BfaI | CTAG | 2 cut(s) | 341, 623 |
| BfuAI | ACCTGC | 1 cut(s) | 49 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 55 |
| BisI | GCNGC | 3 cut(s) | 310, 598, 601 |
| BlsI | GCNGC | 3 cut(s) | 311, 599, 602 |
| Bme18I | GGWCC | 1 cut(s) | 244 |
| BmeT110I | CYCGRG | 1 cut(s) | 263 |
| BmgT120I | GGNCC | 1 cut(s) | 244 |
| BmiI | GGNNCC | 1 cut(s) | 640 |
| BmsI | GCATC | 1 cut(s) | 285 |
| BpmI | CTGGAG | 3 cut(s) | 123, 163, 169 |
| Bpu14I | TTCGAA | 1 cut(s) | 71 |
| BpuEI | CTTGAG | 2 cut(s) | 278, 473 |
| BsaBI | GATNNNNATC | 1 cut(s) | 26 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 677 |
| Bse118I | RCCGGY | 2 cut(s) | 49, 246 |
| Bse1I | ACTGG | 2 cut(s) | 163, 186 |
| Bse3DI | GCAATG | 1 cut(s) | 201 |
| Bse8I | GATNNNNATC | 1 cut(s) | 26 |
| BseGI | GGATG | 3 cut(s) | 202, 398, 516 |
| BseJI | GATNNNNATC | 1 cut(s) | 26 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 677 |
| BseMI | GCAATG | 1 cut(s) | 201 |
| BseMII | CTCAG | 1 cut(s) | 459 |
| BseNI | ACTGG | 2 cut(s) | 163, 186 |
| BseRI | GAGGAG | 1 cut(s) | 91 |
| BseXI | GCAGC | 2 cut(s) | 587, 609 |
| Bsh1236I | CGCG | 1 cut(s) | 482 |
| BshFI | GGCC | 1 cut(s) | 250 |
| BshNI | GGYRCC | 1 cut(s) | 638 |
| BsiHKAI | GWGCWC | 1 cut(s) | 264 |
| BsiHKCI | CYCGRG | 1 cut(s) | 263 |
| BsiSI | CCGG | 2 cut(s) | 50, 247 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 677 |
| BsnI | GGCC | 1 cut(s) | 250 |
| BsoBI | CYCGRG | 1 cut(s) | 263 |
| Bsp119I | TTCGAA | 1 cut(s) | 71 |
| Bsp1286I | GDGCHC | 1 cut(s) | 264 |
| Bsp143I | GATC | 3 cut(s) | 27, 337, 628 |
| BspACI | CCGC | 1 cut(s) | 309 |
| BspANI | GGCC | 1 cut(s) | 250 |
| BspCNI | CTCAG | 1 cut(s) | 460 |
| BspFNI | CGCG | 1 cut(s) | 482 |
| BspLI | GGNNCC | 1 cut(s) | 640 |
| BspMI | ACCTGC | 1 cut(s) | 49 |
| BspPI | GGATC | 1 cut(s) | 345 |
| BspT104I | TTCGAA | 1 cut(s) | 71 |
| BspT107I | GGYRCC | 1 cut(s) | 638 |
| BsrBI | CCGCTC | 1 cut(s) | 309 |
| BsrDI | GCAATG | 1 cut(s) | 201 |
| BsrFI | RCCGGY | 2 cut(s) | 49, 246 |
| BsrI | ACTGG | 2 cut(s) | 163, 186 |
| BssAI | RCCGGY | 2 cut(s) | 49, 246 |
| BssMI | GATC | 3 cut(s) | 27, 337, 628 |
| Bst4CI | ACNGT | 2 cut(s) | 404, 677 |
| Bst6I | CTCTTC | 2 cut(s) | 68, 76 |
| BstBI | TTCGAA | 1 cut(s) | 71 |
| BstC8I | GCNNGC | 3 cut(s) | 51, 164, 595 |
| BstDEI | CTNAG | 2 cut(s) | 417, 468 |
| BstF5I | GGATG | 3 cut(s) | 202, 398, 516 |
| BstFNI | CGCG | 1 cut(s) | 482 |
| BstKTI | GATC | 3 cut(s) | 30, 340, 631 |
| BstMBI | GATC | 3 cut(s) | 27, 337, 628 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 55, 464, 590 |
| BstUI | CGCG | 1 cut(s) | 482 |
| BstV1I | GCAGC | 2 cut(s) | 587, 609 |
| BstX2I | RGATCY | 1 cut(s) | 337 |
| BstYI | RGATCY | 1 cut(s) | 337 |
| BsuRI | GGCC | 1 cut(s) | 250 |
| BtsCI | GGATG | 3 cut(s) | 202, 398, 516 |
| BtsI | GCAGTG | 1 cut(s) | 442 |
| BtsIMutI | CAGTG | 1 cut(s) | 442 |
| BveI | ACCTGC | 1 cut(s) | 49 |
| Cac8I | GCNNGC | 3 cut(s) | 51, 164, 595 |
| CaiI | CAGNNNCTG | 1 cut(s) | 600 |
| Cfr10I | RCCGGY | 2 cut(s) | 49, 246 |
| Cfr13I | GGNCC | 1 cut(s) | 244 |
| CseI | GACGC | 1 cut(s) | 488 |
| Csp6I | GTAC | 1 cut(s) | 189 |
| CviAII | CATG | 1 cut(s) | 269 |
| CviQI | GTAC | 1 cut(s) | 189 |
| DdeI | CTNAG | 2 cut(s) | 417, 468 |
| DpnI | GATC | 3 cut(s) | 29, 339, 630 |
| DpnII | GATC | 3 cut(s) | 27, 337, 628 |
| EaeI | YGGCCR | 1 cut(s) | 248 |
| Eam1104I | CTCTTC | 2 cut(s) | 68, 76 |
| EarI | CTCTTC | 2 cut(s) | 68, 76 |
| Ecl136II | GAGCTC | 1 cut(s) | 262 |
| Eco24I | GRGCYC | 1 cut(s) | 264 |
| Eco47I | GGWCC | 1 cut(s) | 244 |
| Eco53kI | GAGCTC | 1 cut(s) | 262 |
| Eco57I | CTGAAG | 1 cut(s) | 579 |
| Eco88I | CYCGRG | 1 cut(s) | 263 |
| EcoICRI | GAGCTC | 1 cut(s) | 262 |
| EcoT38I | GRGCYC | 1 cut(s) | 264 |
| FaeI | CATG | 1 cut(s) | 272 |
| FaiI | YATR | 6 cut(s) | 121, 213, 270, 317, 356, 506 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 381, 413 |
| FatI | CATG | 1 cut(s) | 268 |
| FbaI | TGATCA | 1 cut(s) | 628 |
| Fnu4HI | GCNGC | 3 cut(s) | 310, 598, 601 |
| FokI | GGATG | 3 cut(s) | 209, 405, 523 |
| FriOI | GRGCYC | 1 cut(s) | 264 |
| Fsp4HI | GCNGC | 3 cut(s) | 310, 598, 601 |
| FspBI | CTAG | 2 cut(s) | 341, 623 |
| GluI | GCNGC | 3 cut(s) | 310, 598, 601 |
| GsuI | CTGGAG | 3 cut(s) | 123, 163, 169 |
| HaeIII | GGCC | 1 cut(s) | 250 |
| HapII | CCGG | 2 cut(s) | 50, 247 |
| HgaI | GACGC | 1 cut(s) | 488 |
| Hin1II | CATG | 1 cut(s) | 272 |
| HinfI | GANTC | 6 cut(s) | 173, 215, 409, 539, 578, 614 |
| HpaII | CCGG | 2 cut(s) | 50, 247 |
| HphI | GGTGA | 2 cut(s) | 73, 523 |
| Hpy188I | TCNGA | 2 cut(s) | 544, 577 |
| Hpy188III | TCNNGA | 5 cut(s) | 31, 257, 341, 446, 550 |
| Hpy99I | CGWCG | 1 cut(s) | 13 |
| HpyAV | CCTTC | 4 cut(s) | 187, 338, 383, 557 |
| HpyCH4III | ACNGT | 2 cut(s) | 404, 677 |
| HpyCH4IV | ACGT | 1 cut(s) | 65 |
| HpyCH4V | TGCA | 2 cut(s) | 276, 367 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 55, 464, 590 |
| HpyF3I | CTNAG | 2 cut(s) | 417, 468 |
| HpySE526I | ACGT | 1 cut(s) | 65 |
| Hsp92II | CATG | 1 cut(s) | 272 |
| KroI | GCCGGC | 1 cut(s) | 49 |
| KroNI | GCCGGC | 1 cut(s) | 51 |
| Ksp22I | TGATCA | 1 cut(s) | 628 |
| Kzo9I | GATC | 3 cut(s) | 27, 337, 628 |
| LmnI | GCTCC | 2 cut(s) | 188, 464 |
| Lsp1109I | GCAGC | 2 cut(s) | 587, 609 |
| LweI | GCATC | 1 cut(s) | 285 |
| MaeI | CTAG | 2 cut(s) | 341, 623 |
| MaeII | ACGT | 1 cut(s) | 65 |
| MaeIII | GTNAC | 3 cut(s) | 61, 485, 529 |
| MalI | GATC | 3 cut(s) | 29, 339, 630 |
| MbiI | CCGCTC | 1 cut(s) | 309 |
| MboI | GATC | 3 cut(s) | 27, 337, 628 |
| MboII | GAAGA | 8 cut(s) | 31, 46, 85, 93, 106, 434, 572, 609 |
| MflI | RGATCY | 1 cut(s) | 337 |
| MhlI | GDGCHC | 1 cut(s) | 264 |
| MluCI | AATT | 1 cut(s) | 491 |
| MlyI | GAGTC | 3 cut(s) | 182, 548, 587 |
| MmeI | TCCRAC | 1 cut(s) | 222 |
| MnlI | CCTC | 7 cut(s) | 48, 69, 77, 187, 201, 328, 448 |
| MroNI | GCCGGC | 1 cut(s) | 49 |
| MseI | TTAA | 2 cut(s) | 399, 494 |
| MspA1I | CMGCKG | 1 cut(s) | 600 |
| MspI | CCGG | 2 cut(s) | 50, 247 |
| MvnI | CGCG | 1 cut(s) | 482 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 55, 464, 590 |
| NaeI | GCCGGC | 1 cut(s) | 51 |
| NdeII | GATC | 3 cut(s) | 27, 337, 628 |
| NgoMIV | GCCGGC | 1 cut(s) | 49 |
| NlaIII | CATG | 1 cut(s) | 272 |
| NlaIV | GGNNCC | 1 cut(s) | 640 |
| NmuCI | GTSAC | 2 cut(s) | 61, 529 |
| NspV | TTCGAA | 1 cut(s) | 71 |
| PaeR7I | CTCGAG | 1 cut(s) | 263 |
| PaqCI | CACCTGC | 1 cut(s) | 49 |
| PdiI | GCCGGC | 1 cut(s) | 51 |
| PfeI | GAWTC | 3 cut(s) | 215, 409, 614 |
| PkrI | GCNGC | 3 cut(s) | 311, 599, 602 |
| PleI | GAGTC | 3 cut(s) | 181, 547, 586 |
| PpsI | GAGTC | 3 cut(s) | 181, 547, 586 |
| Psp124BI | GAGCTC | 1 cut(s) | 264 |
| PspN4I | GGNNCC | 1 cut(s) | 640 |
| PspPI | GGNCC | 1 cut(s) | 244 |
| PspXI | VCTCGAGB | 1 cut(s) | 263 |
| PstNI | CAGNNNCTG | 1 cut(s) | 600 |
| PsuI | RGATCY | 1 cut(s) | 337 |
| PvuII | CAGCTG | 1 cut(s) | 600 |
| RsaI | GTAC | 1 cut(s) | 190 |
| RsaNI | GTAC | 1 cut(s) | 189 |
| SacI | GAGCTC | 1 cut(s) | 264 |
| SaqAI | TTAA | 2 cut(s) | 399, 494 |
| SatI | GCNGC | 3 cut(s) | 310, 598, 601 |
| Sau3AI | GATC | 3 cut(s) | 27, 337, 628 |
| Sau96I | GGNCC | 1 cut(s) | 244 |
| SchI | GAGTC | 3 cut(s) | 182, 548, 587 |
| SduI | GDGCHC | 1 cut(s) | 264 |
| SfaNI | GCATC | 1 cut(s) | 285 |
| Sfr274I | CTCGAG | 1 cut(s) | 263 |
| SfuI | TTCGAA | 1 cut(s) | 71 |
| SinI | GGWCC | 1 cut(s) | 244 |
| SlaI | CTCGAG | 1 cut(s) | 263 |
| SmlI | CTYRAG | 3 cut(s) | 257, 263, 452 |
| SmoI | CTYRAG | 3 cut(s) | 257, 263, 452 |
| Sse9I | AATT | 1 cut(s) | 491 |
| SsiI | CCGC | 1 cut(s) | 309 |
| SspMI | CTAG | 2 cut(s) | 341, 623 |
| SstI | GAGCTC | 1 cut(s) | 264 |
| TaaI | ACNGT | 2 cut(s) | 404, 677 |
| TaiI | ACGT | 1 cut(s) | 68 |
| TaqI | TCGA | 4 cut(s) | 30, 71, 264, 551 |
| TasI | AATT | 1 cut(s) | 491 |
| TauI | GCSGC | 1 cut(s) | 312 |
| TfiI | GAWTC | 3 cut(s) | 215, 409, 614 |
| Tru1I | TTAA | 2 cut(s) | 399, 494 |
| Tru9I | TTAA | 2 cut(s) | 399, 494 |
| TscAI | CASTG | 1 cut(s) | 442 |
| TseFI | GTSAC | 2 cut(s) | 61, 529 |
| TseI | GCWGC | 2 cut(s) | 597, 600 |
| Tsp45I | GTSAC | 2 cut(s) | 61, 529 |
| TspDTI | ATGAA | 3 cut(s) | 17, 228, 341 |
| TspRI | CASTG | 1 cut(s) | 442 |
| VpaK11BI | GGWCC | 1 cut(s) | 244 |
| XbaI | TCTAGA | 1 cut(s) | 340 |
| XhoI | CTCGAG | 1 cut(s) | 263 |
| XspI | CTAG | 2 cut(s) | 341, 623 |