MADS-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| K-box | PF01486 | 2 - 77 | 1.5e-13 | K-box region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 23, 46 |
| AclWI | GGATC | 2 cut(s) | 25, 69 |
| AfaI | GTAC | 1 cut(s) | 364 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 440 |
| AgsI | TTSAA | 4 cut(s) | 10, 113, 137, 179 |
| AluBI | AGCT | 2 cut(s) | 73, 272 |
| AluI | AGCT | 2 cut(s) | 73, 272 |
| AlwI | GGATC | 2 cut(s) | 25, 69 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 169 |
| Ama87I | CYCGRG | 1 cut(s) | 35 |
| ApeKI | GCWGC | 1 cut(s) | 354 |
| AvaI | CYCGRG | 1 cut(s) | 35 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 355, 387 |
| BbvI | GCAGC | 1 cut(s) | 341 |
| BccI | CCATC | 1 cut(s) | 43 |
| BceAI | ACGGC | 1 cut(s) | 111 |
| BfmI | CTRYAG | 1 cut(s) | 358 |
| BglII | AGATCT | 1 cut(s) | 297 |
| BisI | GCNGC | 1 cut(s) | 355 |
| BlsI | GCNGC | 1 cut(s) | 356 |
| BmcAI | AGTACT | 1 cut(s) | 364 |
| BmeT110I | CYCGRG | 1 cut(s) | 35 |
| BmiI | GGNNCC | 1 cut(s) | 346 |
| BmsI | GCATC | 2 cut(s) | 234, 335 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 440 |
| Bse118I | RCCGGY | 1 cut(s) | 350 |
| Bse1I | ACTGG | 1 cut(s) | 370 |
| BseGI | GGATG | 2 cut(s) | 54, 249 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 440 |
| BseMII | CTCAG | 1 cut(s) | 136 |
| BseNI | ACTGG | 1 cut(s) | 370 |
| BseRI | GAGGAG | 1 cut(s) | 388 |
| BseXI | GCAGC | 1 cut(s) | 341 |
| BsiHKCI | CYCGRG | 1 cut(s) | 35 |
| BsiSI | CCGG | 1 cut(s) | 351 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 440 |
| BsoBI | CYCGRG | 1 cut(s) | 35 |
| Bsp143I | GATC | 3 cut(s) | 30, 61, 297 |
| BspACI | CCGC | 2 cut(s) | 23, 46 |
| BspCNI | CTCAG | 1 cut(s) | 135 |
| BspLI | GGNNCC | 1 cut(s) | 346 |
| BspPI | GGATC | 2 cut(s) | 25, 69 |
| BspQI | GCTCTTC | 1 cut(s) | 63 |
| BsrFI | RCCGGY | 1 cut(s) | 350 |
| BsrI | ACTGG | 1 cut(s) | 370 |
| BssAI | RCCGGY | 1 cut(s) | 350 |
| BssMI | GATC | 3 cut(s) | 30, 61, 297 |
| Bst4CI | ACNGT | 1 cut(s) | 362 |
| Bst6I | CTCTTC | 1 cut(s) | 63 |
| BstDEI | CTNAG | 2 cut(s) | 122, 141 |
| BstF5I | GGATG | 2 cut(s) | 54, 249 |
| BstKTI | GATC | 3 cut(s) | 33, 64, 300 |
| BstMBI | GATC | 3 cut(s) | 30, 61, 297 |
| BstSFI | CTRYAG | 1 cut(s) | 358 |
| BstV1I | GCAGC | 1 cut(s) | 341 |
| BstX2I | RGATCY | 3 cut(s) | 30, 61, 297 |
| BstYI | RGATCY | 3 cut(s) | 30, 61, 297 |
| BtsCI | GGATG | 2 cut(s) | 54, 249 |
| CaiI | CAGNNNCTG | 1 cut(s) | 169 |
| Cfr10I | RCCGGY | 1 cut(s) | 350 |
| Csp6I | GTAC | 1 cut(s) | 363 |
| CviJI | RGCY | 6 cut(s) | 73, 126, 272, 354, 430, 444 |
| CviKI_1 | RGCY | 6 cut(s) | 73, 126, 272, 354, 430, 444 |
| CviQI | GTAC | 1 cut(s) | 363 |
| DdeI | CTNAG | 2 cut(s) | 122, 141 |
| DpnI | GATC | 3 cut(s) | 32, 63, 299 |
| DpnII | GATC | 3 cut(s) | 30, 61, 297 |
| Eam1104I | CTCTTC | 1 cut(s) | 63 |
| EarI | CTCTTC | 1 cut(s) | 63 |
| EciI | GGCGGA | 1 cut(s) | 61 |
| Eco88I | CYCGRG | 1 cut(s) | 35 |
| FaiI | YATR | 4 cut(s) | 80, 158, 323, 341 |
| Fnu4HI | GCNGC | 1 cut(s) | 355 |
| FokI | GGATG | 2 cut(s) | 61, 256 |
| Fsp4HI | GCNGC | 1 cut(s) | 355 |
| GluI | GCNGC | 1 cut(s) | 355 |
| HapII | CCGG | 1 cut(s) | 351 |
| HincII | GTYRAC | 1 cut(s) | 198 |
| HindII | GTYRAC | 1 cut(s) | 198 |
| HinfI | GANTC | 6 cut(s) | 120, 160, 166, 290, 332, 395 |
| HpaII | CCGG | 1 cut(s) | 351 |
| Hpy166II | GTNNAC | 1 cut(s) | 198 |
| Hpy188I | TCNGA | 4 cut(s) | 165, 295, 331, 403 |
| Hpy188III | TCNNGA | 2 cut(s) | 65, 170 |
| Hpy8I | GTNNAC | 1 cut(s) | 198 |
| HpyAV | CCTTC | 2 cut(s) | 107, 311 |
| HpyCH4III | ACNGT | 1 cut(s) | 362 |
| HpyCH4V | TGCA | 1 cut(s) | 91 |
| HpyF3I | CTNAG | 2 cut(s) | 122, 141 |
| Kzo9I | GATC | 3 cut(s) | 30, 61, 297 |
| LguI | GCTCTTC | 1 cut(s) | 63 |
| LmnI | GCTCC | 1 cut(s) | 188 |
| LpnPI | CCDG | 5 cut(s) | 44, 155, 258, 351, 364 |
| Lsp1109I | GCAGC | 1 cut(s) | 341 |
| LweI | GCATC | 2 cut(s) | 234, 335 |
| MalI | GATC | 3 cut(s) | 32, 63, 299 |
| MboI | GATC | 3 cut(s) | 30, 61, 297 |
| MboII | GAAGA | 5 cut(s) | 80, 323, 326, 363, 372 |
| MflI | RGATCY | 3 cut(s) | 30, 61, 297 |
| MluCI | AATT | 2 cut(s) | 86, 215 |
| MlyI | GAGTC | 4 cut(s) | 114, 169, 299, 389 |
| MmeI | TCCRAC | 1 cut(s) | 273 |
| MnlI | CCTC | 6 cut(s) | 44, 46, 110, 219, 409, 444 |
| MseI | TTAA | 1 cut(s) | 218 |
| MspI | CCGG | 1 cut(s) | 351 |
| NdeII | GATC | 3 cut(s) | 30, 61, 297 |
| NlaIV | GGNNCC | 1 cut(s) | 346 |
| PaeR7I | CTCGAG | 1 cut(s) | 35 |
| PciSI | GCTCTTC | 1 cut(s) | 63 |
| PfeI | GAWTC | 2 cut(s) | 166, 332 |
| PkrI | GCNGC | 1 cut(s) | 356 |
| PleI | GAGTC | 4 cut(s) | 114, 168, 298, 389 |
| PpsI | GAGTC | 4 cut(s) | 114, 168, 298, 389 |
| PspN4I | GGNNCC | 1 cut(s) | 346 |
| PspXI | VCTCGAGB | 1 cut(s) | 35 |
| PstNI | CAGNNNCTG | 1 cut(s) | 169 |
| PsuI | RGATCY | 3 cut(s) | 30, 61, 297 |
| RsaI | GTAC | 1 cut(s) | 364 |
| RsaNI | GTAC | 1 cut(s) | 363 |
| SapI | GCTCTTC | 1 cut(s) | 63 |
| SaqAI | TTAA | 1 cut(s) | 218 |
| SatI | GCNGC | 1 cut(s) | 355 |
| Sau3AI | GATC | 3 cut(s) | 30, 61, 297 |
| ScaI | AGTACT | 1 cut(s) | 364 |
| SchI | GAGTC | 4 cut(s) | 114, 169, 299, 389 |
| SetI | ASST | 5 cut(s) | 8, 75, 274, 322, 346 |
| SfaNI | GCATC | 2 cut(s) | 234, 335 |
| SfcI | CTRYAG | 1 cut(s) | 358 |
| Sfr274I | CTCGAG | 1 cut(s) | 35 |
| SlaI | CTCGAG | 1 cut(s) | 35 |
| SmlI | CTYRAG | 1 cut(s) | 35 |
| SmoI | CTYRAG | 1 cut(s) | 35 |
| Sse9I | AATT | 2 cut(s) | 86, 215 |
| SsiI | CCGC | 2 cut(s) | 23, 46 |
| TaaI | ACNGT | 1 cut(s) | 362 |
| TaqI | TCGA | 3 cut(s) | 36, 66, 374 |
| TasI | AATT | 2 cut(s) | 86, 215 |
| TatI | WGTACW | 1 cut(s) | 362 |
| TfiI | GAWTC | 2 cut(s) | 166, 332 |
| Tru1I | TTAA | 1 cut(s) | 218 |
| Tru9I | TTAA | 1 cut(s) | 218 |
| TseI | GCWGC | 1 cut(s) | 354 |
| TspDTI | ATGAA | 2 cut(s) | 99, 324 |
| XhoI | CTCGAG | 1 cut(s) | 35 |
| ZrmI | AGTACT | 1 cut(s) | 364 |