MADS-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PMEI | PF04043 | 151 - 292 | 5.1e-26 | Plant invertase/pectin methylesterase inhibitor |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 293 |
| AccIII | TCCGGA | 1 cut(s) | 727 |
| AciI | CCGC | 5 cut(s) | 84, 92, 291, 450, 765 |
| AclWI | GGATC | 4 cut(s) | 12, 437, 450, 492 |
| AdeI | CACNNNGTG | 1 cut(s) | 827 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 276, 353 |
| AflIII | ACRYGT | 1 cut(s) | 788 |
| AgsI | TTSAA | 5 cut(s) | 37, 213, 257, 707, 806 |
| AjnI | CCWGG | 1 cut(s) | 600 |
| AluBI | AGCT | 5 cut(s) | 134, 406, 437, 460, 608 |
| AluI | AGCT | 5 cut(s) | 134, 406, 437, 460, 608 |
| AlwI | GGATC | 4 cut(s) | 12, 437, 450, 492 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 437 |
| Aor13HI | TCCGGA | 1 cut(s) | 727 |
| AoxI | GGCC | 4 cut(s) | 267, 278, 597, 700 |
| ApeKI | GCWGC | 5 cut(s) | 413, 434, 605, 608, 858 |
| AspS9I | GGNCC | 1 cut(s) | 598 |
| AsuHPI | GGTGA | 3 cut(s) | 306, 420, 577 |
| BamHI | GGATCC | 2 cut(s) | 4, 442 |
| BauI | CACGAG | 1 cut(s) | 522 |
| BbvI | GCAGC | 5 cut(s) | 425, 446, 595, 617, 870 |
| BceAI | ACGGC | 2 cut(s) | 242, 530 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 402, 436 |
| BciT130I | CCWGG | 1 cut(s) | 602 |
| BfmI | CTRYAG | 3 cut(s) | 75, 297, 537 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 596 |
| BisI | GCNGC | 7 cut(s) | 84, 414, 435, 450, 606, 609, 859 |
| BlpI | GCTNAGC | 1 cut(s) | 761 |
| BlsI | GCNGC | 7 cut(s) | 85, 415, 436, 451, 607, 610, 860 |
| Bme1390I | CCNGG | 1 cut(s) | 602 |
| BmgT120I | GGNCC | 1 cut(s) | 598 |
| BmiI | GGNNCC | 5 cut(s) | 6, 230, 358, 444, 630 |
| BmrFI | CCNGG | 1 cut(s) | 602 |
| BmsI | GCATC | 5 cut(s) | 532, 543, 620, 709, 769 |
| BpmI | CTGGAG | 3 cut(s) | 114, 120, 542 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 761 |
| BpuEI | CTTGAG | 1 cut(s) | 88 |
| BsaJI | CCNNGG | 6 cut(s) | 224, 275, 374, 600, 624, 654 |
| BsaWI | WCCGGW | 1 cut(s) | 727 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 157, 187, 213, 243 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 276, 353 |
| Bse1I | ACTGG | 1 cut(s) | 303 |
| Bse3DI | GCAATG | 2 cut(s) | 738, 873 |
| BseAI | TCCGGA | 1 cut(s) | 727 |
| BseBI | CCWGG | 1 cut(s) | 602 |
| BseDI | CCNNGG | 6 cut(s) | 224, 275, 374, 600, 624, 654 |
| BseGI | GGATG | 3 cut(s) | 703, 724, 802 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 276, 353 |
| BseMI | GCAATG | 2 cut(s) | 738, 873 |
| BseMII | CTCAG | 1 cut(s) | 398 |
| BseNI | ACTGG | 1 cut(s) | 303 |
| BseRI | GAGGAG | 1 cut(s) | 165 |
| BseXI | GCAGC | 5 cut(s) | 425, 446, 595, 617, 870 |
| BseYI | CCCAGC | 1 cut(s) | 190 |
| BsgI | GTGCAG | 1 cut(s) | 432 |
| BshFI | GGCC | 4 cut(s) | 269, 280, 599, 702 |
| BsiSI | CCGG | 2 cut(s) | 232, 728 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 276, 353 |
| BsnI | GGCC | 4 cut(s) | 269, 280, 599, 702 |
| Bsp13I | TCCGGA | 1 cut(s) | 727 |
| Bsp143I | GATC | 3 cut(s) | 4, 442, 484 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 761 |
| Bsp19I | CCATGG | 1 cut(s) | 654 |
| BspACI | CCGC | 5 cut(s) | 84, 92, 291, 450, 765 |
| BspANI | GGCC | 4 cut(s) | 269, 280, 599, 702 |
| BspCNI | CTCAG | 1 cut(s) | 399 |
| BspEI | TCCGGA | 1 cut(s) | 727 |
| BspLI | GGNNCC | 5 cut(s) | 6, 230, 358, 444, 630 |
| BspMAI | CTGCAG | 1 cut(s) | 79 |
| BspPI | GGATC | 4 cut(s) | 12, 437, 450, 492 |
| BsrBI | CCGCTC | 1 cut(s) | 293 |
| BsrDI | GCAATG | 2 cut(s) | 738, 873 |
| BsrI | ACTGG | 1 cut(s) | 303 |
| BssECI | CCNNGG | 6 cut(s) | 224, 275, 374, 600, 624, 654 |
| BssMI | GATC | 3 cut(s) | 4, 442, 484 |
| BssSI | CACGAG | 1 cut(s) | 522 |
| BssT1I | CCWWGG | 1 cut(s) | 654 |
| Bst2BI | CACGAG | 1 cut(s) | 522 |
| Bst2UI | CCWGG | 1 cut(s) | 602 |
| Bst4CI | ACNGT | 1 cut(s) | 143 |
| Bst6I | CTCTTC | 1 cut(s) | 258 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 719, 864 |
| BstC8I | GCNNGC | 4 cut(s) | 88, 92, 404, 577 |
| BstDEI | CTNAG | 3 cut(s) | 407, 761, 824 |
| BstDSI | CCRYGG | 4 cut(s) | 224, 374, 624, 654 |
| BstF5I | GGATG | 3 cut(s) | 703, 724, 802 |
| BstKTI | GATC | 3 cut(s) | 7, 445, 487 |
| BstMBI | GATC | 3 cut(s) | 4, 442, 484 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 83, 191, 299, 378, 596, 605, 719, 864 |
| BstNI | CCWGG | 1 cut(s) | 602 |
| BstNSI | RCATGY | 2 cut(s) | 90, 792 |
| BstSCI | CCNGG | 1 cut(s) | 600 |
| BstSFI | CTRYAG | 3 cut(s) | 75, 297, 537 |
| BstV1I | GCAGC | 5 cut(s) | 425, 446, 595, 617, 870 |
| BstX2I | RGATCY | 3 cut(s) | 4, 442, 484 |
| BstYI | RGATCY | 3 cut(s) | 4, 442, 484 |
| BsuRI | GGCC | 4 cut(s) | 269, 280, 599, 702 |
| BtgI | CCRYGG | 4 cut(s) | 224, 374, 624, 654 |
| BtgZI | GCGATG | 1 cut(s) | 405 |
| BtsCI | GGATG | 3 cut(s) | 703, 724, 802 |
| Cac8I | GCNNGC | 4 cut(s) | 88, 92, 404, 577 |
| CaiI | CAGNNNCTG | 1 cut(s) | 437 |
| Cfr13I | GGNCC | 1 cut(s) | 598 |
| CviAII | CATG | 4 cut(s) | 87, 655, 664, 789 |
| DdeI | CTNAG | 3 cut(s) | 407, 761, 824 |
| DpnI | GATC | 3 cut(s) | 6, 444, 486 |
| DpnII | GATC | 3 cut(s) | 4, 442, 484 |
| DraIII | CACNNNGTG | 1 cut(s) | 827 |
| Eam1104I | CTCTTC | 1 cut(s) | 258 |
| EarI | CTCTTC | 1 cut(s) | 258 |
| Eco130I | CCWWGG | 1 cut(s) | 654 |
| EcoRII | CCWGG | 1 cut(s) | 600 |
| EcoT14I | CCWWGG | 1 cut(s) | 654 |
| ErhI | CCWWGG | 1 cut(s) | 654 |
| FaeI | CATG | 4 cut(s) | 90, 658, 667, 792 |
| FatI | CATG | 4 cut(s) | 86, 654, 663, 788 |
| FauI | CCCGC | 2 cut(s) | 99, 758 |
| Fnu4HI | GCNGC | 7 cut(s) | 84, 414, 435, 450, 606, 609, 859 |
| FokI | GGATG | 3 cut(s) | 710, 731, 809 |
| Fsp4HI | GCNGC | 7 cut(s) | 84, 414, 435, 450, 606, 609, 859 |
| GluI | GCNGC | 7 cut(s) | 84, 414, 435, 450, 606, 609, 859 |
| GsaI | CCCAGC | 1 cut(s) | 194 |
| GsuI | CTGGAG | 3 cut(s) | 114, 120, 542 |
| HaeIII | GGCC | 4 cut(s) | 269, 280, 599, 702 |
| HapII | CCGG | 2 cut(s) | 232, 728 |
| Hin1II | CATG | 4 cut(s) | 90, 658, 667, 792 |
| HincII | GTYRAC | 1 cut(s) | 146 |
| HindII | GTYRAC | 1 cut(s) | 146 |
| HinfI | GANTC | 2 cut(s) | 100, 724 |
| HpaII | CCGG | 2 cut(s) | 232, 728 |
| HphI | GGTGA | 3 cut(s) | 306, 420, 577 |
| Hpy166II | GTNNAC | 1 cut(s) | 146 |
| Hpy188III | TCNNGA | 3 cut(s) | 137, 559, 728 |
| Hpy8I | GTNNAC | 1 cut(s) | 146 |
| HpyAV | CCTTC | 3 cut(s) | 255, 713, 800 |
| HpyCH4III | ACNGT | 1 cut(s) | 143 |
| HpyCH4V | TGCA | 8 cut(s) | 77, 394, 413, 492, 611, 672, 713, 782 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 83, 191, 299, 378, 596, 605, 719, 864 |
| HpyF3I | CTNAG | 3 cut(s) | 407, 761, 824 |
| Hsp92II | CATG | 4 cut(s) | 90, 658, 667, 792 |
| Kpn2I | TCCGGA | 1 cut(s) | 727 |
| Kzo9I | GATC | 3 cut(s) | 4, 442, 484 |
| LmnI | GCTCC | 7 cut(s) | 139, 234, 298, 378, 561, 584, 628 |
| Lsp1109I | GCAGC | 5 cut(s) | 425, 446, 595, 617, 870 |
| LweI | GCATC | 5 cut(s) | 532, 543, 620, 709, 769 |
| MaeIII | GTNAC | 2 cut(s) | 464, 547 |
| MalI | GATC | 3 cut(s) | 6, 444, 486 |
| MbiI | CCGCTC | 1 cut(s) | 293 |
| MboI | GATC | 3 cut(s) | 4, 442, 484 |
| MboII | GAAGA | 4 cut(s) | 43, 46, 201, 245 |
| MfeI | CAATTG | 1 cut(s) | 862 |
| MflI | RGATCY | 3 cut(s) | 4, 442, 484 |
| MluCI | AATT | 2 cut(s) | 771, 862 |
| MmeI | TCCRAC | 1 cut(s) | 675 |
| MroI | TCCGGA | 1 cut(s) | 727 |
| MseI | TTAA | 2 cut(s) | 219, 750 |
| MslI | CAYNNNNRTG | 1 cut(s) | 787 |
| MspA1I | CMGCKG | 3 cut(s) | 406, 437, 608 |
| MspI | CCGG | 2 cut(s) | 232, 728 |
| MspR9I | CCNGG | 1 cut(s) | 602 |
| MunI | CAATTG | 1 cut(s) | 862 |
| MvaI | CCWGG | 1 cut(s) | 602 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 83, 191, 299, 378, 596, 605, 719, 864 |
| NcoI | CCATGG | 1 cut(s) | 654 |
| NdeII | GATC | 3 cut(s) | 4, 442, 484 |
| NlaIII | CATG | 4 cut(s) | 90, 658, 667, 792 |
| NlaIV | GGNNCC | 5 cut(s) | 6, 230, 358, 444, 630 |
| NmeAIII | GCCGAG | 1 cut(s) | 256 |
| NspI | RCATGY | 2 cut(s) | 90, 792 |
| PaeI | GCATGC | 1 cut(s) | 90 |
| PciI | ACATGT | 1 cut(s) | 788 |
| PfeI | GAWTC | 2 cut(s) | 100, 724 |
| PkrI | GCNGC | 7 cut(s) | 85, 415, 436, 451, 607, 610, 860 |
| PscI | ACATGT | 1 cut(s) | 788 |
| Psp6I | CCWGG | 1 cut(s) | 600 |
| PspFI | CCCAGC | 1 cut(s) | 190 |
| PspGI | CCWGG | 1 cut(s) | 600 |
| PspN4I | GGNNCC | 5 cut(s) | 6, 230, 358, 444, 630 |
| PspPI | GGNCC | 1 cut(s) | 598 |
| PstI | CTGCAG | 1 cut(s) | 79 |
| PstNI | CAGNNNCTG | 1 cut(s) | 437 |
| PsuI | RGATCY | 3 cut(s) | 4, 442, 484 |
| PvuII | CAGCTG | 3 cut(s) | 406, 437, 608 |
| RseI | CAYNNNNRTG | 1 cut(s) | 787 |
| SaqAI | TTAA | 2 cut(s) | 219, 750 |
| SatI | GCNGC | 7 cut(s) | 84, 414, 435, 450, 606, 609, 859 |
| Sau3AI | GATC | 3 cut(s) | 4, 442, 484 |
| Sau96I | GGNCC | 1 cut(s) | 598 |
| ScrFI | CCNGG | 1 cut(s) | 602 |
| SetI | ASST | 8 cut(s) | 34, 136, 265, 387, 408, 439, 462, 610 |
| SfaNI | GCATC | 5 cut(s) | 532, 543, 620, 709, 769 |
| SfcI | CTRYAG | 3 cut(s) | 75, 297, 537 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 787 |
| SmlI | CTYRAG | 1 cut(s) | 67 |
| SmoI | CTYRAG | 1 cut(s) | 67 |
| SphI | GCATGC | 1 cut(s) | 90 |
| Sse9I | AATT | 2 cut(s) | 771, 862 |
| SsiI | CCGC | 5 cut(s) | 84, 92, 291, 450, 765 |
| SspI | AATATT | 1 cut(s) | 240 |
| StyD4I | CCNGG | 1 cut(s) | 600 |
| StyI | CCWWGG | 1 cut(s) | 654 |
| TaaI | ACNGT | 1 cut(s) | 143 |
| TasI | AATT | 2 cut(s) | 771, 862 |
| TauI | GCSGC | 2 cut(s) | 86, 452 |
| TfiI | GAWTC | 2 cut(s) | 100, 724 |
| Tru1I | TTAA | 2 cut(s) | 219, 750 |
| Tru9I | TTAA | 2 cut(s) | 219, 750 |
| TseI | GCWGC | 5 cut(s) | 413, 434, 605, 608, 858 |
| TspDTI | ATGAA | 3 cut(s) | 237, 486, 836 |
| TspGWI | ACGGA | 4 cut(s) | 168, 391, 497, 641 |
| XceI | RCATGY | 2 cut(s) | 90, 792 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 661 |