MADS-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| K-box | PF01486 | 7 - 81 | 1.6e-14 | K-box region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 387 |
| AccII | CGCG | 1 cut(s) | 51 |
| AciI | CCGC | 1 cut(s) | 49 |
| AclWI | GGATC | 1 cut(s) | 84 |
| AfaI | GTAC | 1 cut(s) | 285 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 434 |
| AgsI | TTSAA | 3 cut(s) | 106, 128, 194 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 406 |
| AluBI | AGCT | 3 cut(s) | 206, 278, 357 |
| AluI | AGCT | 3 cut(s) | 206, 278, 357 |
| Alw26I | GTCTC | 1 cut(s) | 414 |
| AlwI | GGATC | 1 cut(s) | 84 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 360 |
| ApeKI | GCWGC | 3 cut(s) | 354, 357, 360 |
| AspLEI | GCGC | 1 cut(s) | 365 |
| AsuHPI | GGTGA | 2 cut(s) | 83, 188 |
| AsuNHI | GCTAGC | 1 cut(s) | 350 |
| BbvI | GCAGC | 3 cut(s) | 344, 347, 366 |
| BccI | CCATC | 1 cut(s) | 238 |
| BceAI | ACGGC | 2 cut(s) | 126, 327 |
| BcoDI | GTCTC | 1 cut(s) | 414 |
| BfaI | CTAG | 1 cut(s) | 351 |
| BisI | GCNGC | 3 cut(s) | 355, 358, 361 |
| BlsI | GCNGC | 3 cut(s) | 356, 359, 362 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 406 |
| BmsI | GCATC | 1 cut(s) | 24 |
| BmtI | GCTAGC | 1 cut(s) | 354 |
| Bpu10I | CCTNAGC | 1 cut(s) | 56 |
| BsaJI | CCNNGG | 3 cut(s) | 156, 291, 433 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 434 |
| Bse1I | ACTGG | 1 cut(s) | 373 |
| BseDI | CCNNGG | 3 cut(s) | 156, 291, 433 |
| BseGI | GGATG | 2 cut(s) | 103, 255 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 434 |
| BseMII | CTCAG | 1 cut(s) | 198 |
| BseNI | ACTGG | 1 cut(s) | 373 |
| BseRI | GAGGAG | 1 cut(s) | 131 |
| BseXI | GCAGC | 3 cut(s) | 344, 347, 366 |
| Bsh1236I | CGCG | 1 cut(s) | 51 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 434 |
| BsmAI | GTCTC | 1 cut(s) | 414 |
| Bsp143I | GATC | 2 cut(s) | 10, 76 |
| BspACI | CCGC | 1 cut(s) | 49 |
| BspCNI | CTCAG | 1 cut(s) | 199 |
| BspFNI | CGCG | 1 cut(s) | 51 |
| BspOI | GCTAGC | 1 cut(s) | 354 |
| BspPI | GGATC | 1 cut(s) | 84 |
| BsrI | ACTGG | 1 cut(s) | 373 |
| BssECI | CCNNGG | 3 cut(s) | 156, 291, 433 |
| BssMI | GATC | 2 cut(s) | 10, 76 |
| BssT1I | CCWWGG | 2 cut(s) | 156, 291 |
| Bst4CI | ACNGT | 1 cut(s) | 434 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 360 |
| BstC8I | GCNNGC | 2 cut(s) | 53, 352 |
| BstDEI | CTNAG | 3 cut(s) | 56, 137, 207 |
| BstDSI | CCRYGG | 1 cut(s) | 433 |
| BstF5I | GGATG | 2 cut(s) | 103, 255 |
| BstFNI | CGCG | 1 cut(s) | 51 |
| BstHHI | GCGC | 1 cut(s) | 365 |
| BstKTI | GATC | 2 cut(s) | 13, 79 |
| BstMAI | GTCTC | 1 cut(s) | 414 |
| BstMBI | GATC | 2 cut(s) | 10, 76 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 194, 203, 347, 360 |
| BstUI | CGCG | 1 cut(s) | 51 |
| BstV1I | GCAGC | 3 cut(s) | 344, 347, 366 |
| BstX2I | RGATCY | 1 cut(s) | 76 |
| BstYI | RGATCY | 1 cut(s) | 76 |
| BtgI | CCRYGG | 1 cut(s) | 433 |
| BtsCI | GGATG | 2 cut(s) | 103, 255 |
| Cac8I | GCNNGC | 2 cut(s) | 53, 352 |
| CaiI | CAGNNNCTG | 1 cut(s) | 360 |
| CfoI | GCGC | 1 cut(s) | 365 |
| Csp6I | GTAC | 1 cut(s) | 284 |
| CviJI | RGCY | 7 cut(s) | 88, 141, 206, 278, 357, 424, 438 |
| CviKI_1 | RGCY | 7 cut(s) | 88, 141, 206, 278, 357, 424, 438 |
| CviQI | GTAC | 1 cut(s) | 284 |
| DdeI | CTNAG | 3 cut(s) | 56, 137, 207 |
| DpnI | GATC | 2 cut(s) | 12, 78 |
| DpnII | GATC | 2 cut(s) | 10, 76 |
| DriI | GACNNNNNGTC | 1 cut(s) | 406 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 406 |
| Eco130I | CCWWGG | 2 cut(s) | 156, 291 |
| Eco32I | GATATC | 2 cut(s) | 255, 304 |
| EcoRV | GATATC | 2 cut(s) | 255, 304 |
| EcoT14I | CCWWGG | 2 cut(s) | 156, 291 |
| ErhI | CCWWGG | 2 cut(s) | 156, 291 |
| FaiI | YATR | 3 cut(s) | 95, 173, 185 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 120, 152 |
| FauI | CCCGC | 1 cut(s) | 56 |
| FblI | GTMKAC | 1 cut(s) | 387 |
| Fnu4HI | GCNGC | 3 cut(s) | 355, 358, 361 |
| FokI | GGATG | 2 cut(s) | 110, 262 |
| Fsp4HI | GCNGC | 3 cut(s) | 355, 358, 361 |
| FspBI | CTAG | 1 cut(s) | 351 |
| GlaI | GCGC | 1 cut(s) | 364 |
| GluI | GCNGC | 3 cut(s) | 355, 358, 361 |
| HhaI | GCGC | 1 cut(s) | 365 |
| Hin6I | GCGC | 1 cut(s) | 363 |
| HinP1I | GCGC | 1 cut(s) | 363 |
| HincII | GTYRAC | 1 cut(s) | 388 |
| HindII | GTYRAC | 1 cut(s) | 388 |
| HinfI | GANTC | 3 cut(s) | 296, 335, 389 |
| HphI | GGTGA | 2 cut(s) | 83, 188 |
| Hpy166II | GTNNAC | 3 cut(s) | 223, 284, 388 |
| Hpy188I | TCNGA | 2 cut(s) | 301, 334 |
| Hpy188III | TCNNGA | 2 cut(s) | 8, 80 |
| Hpy8I | GTNNAC | 3 cut(s) | 223, 284, 388 |
| HpyAV | CCTTC | 3 cut(s) | 77, 122, 314 |
| HpyCH4III | ACNGT | 1 cut(s) | 434 |
| HpyCH4V | TGCA | 2 cut(s) | 38, 263 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 194, 203, 347, 360 |
| HpyF3I | CTNAG | 3 cut(s) | 56, 137, 207 |
| HspAI | GCGC | 1 cut(s) | 363 |
| Kzo9I | GATC | 2 cut(s) | 10, 76 |
| LmnI | GCTCC | 1 cut(s) | 203 |
| LpnPI | CCDG | 4 cut(s) | 65, 264, 354, 393 |
| Lsp1109I | GCAGC | 3 cut(s) | 344, 347, 366 |
| LweI | GCATC | 1 cut(s) | 24 |
| MaeI | CTAG | 1 cut(s) | 351 |
| MalI | GATC | 2 cut(s) | 12, 78 |
| MboI | GATC | 2 cut(s) | 10, 76 |
| MboII | GAAGA | 4 cut(s) | 118, 173, 329, 366 |
| MfeI | CAATTG | 1 cut(s) | 345 |
| MflI | RGATCY | 1 cut(s) | 76 |
| MluCI | AATT | 2 cut(s) | 110, 345 |
| MlyI | GAGTC | 2 cut(s) | 305, 383 |
| MmeI | TCCRAC | 2 cut(s) | 195, 279 |
| MnlI | CCTC | 4 cut(s) | 67, 109, 112, 125 |
| MseI | TTAA | 1 cut(s) | 233 |
| MspA1I | CMGCKG | 1 cut(s) | 357 |
| MunI | CAATTG | 1 cut(s) | 345 |
| MvnI | CGCG | 1 cut(s) | 51 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 194, 203, 347, 360 |
| NdeII | GATC | 2 cut(s) | 10, 76 |
| NheI | GCTAGC | 1 cut(s) | 350 |
| PfeI | GAWTC | 1 cut(s) | 335 |
| PkrI | GCNGC | 3 cut(s) | 356, 359, 362 |
| PleI | GAGTC | 2 cut(s) | 304, 383 |
| PpsI | GAGTC | 2 cut(s) | 304, 383 |
| PstNI | CAGNNNCTG | 1 cut(s) | 360 |
| PsuI | RGATCY | 1 cut(s) | 76 |
| PvuII | CAGCTG | 1 cut(s) | 357 |
| RsaI | GTAC | 1 cut(s) | 285 |
| RsaNI | GTAC | 1 cut(s) | 284 |
| SalI | GTCGAC | 1 cut(s) | 386 |
| SaqAI | TTAA | 1 cut(s) | 233 |
| SatI | GCNGC | 3 cut(s) | 355, 358, 361 |
| Sau3AI | GATC | 2 cut(s) | 10, 76 |
| SchI | GAGTC | 2 cut(s) | 305, 383 |
| SetI | ASST | 5 cut(s) | 208, 280, 325, 359, 407 |
| SfaNI | GCATC | 1 cut(s) | 24 |
| Sse9I | AATT | 2 cut(s) | 110, 345 |
| SsiI | CCGC | 1 cut(s) | 49 |
| SspMI | CTAG | 1 cut(s) | 351 |
| StyI | CCWWGG | 2 cut(s) | 156, 291 |
| TaaI | ACNGT | 1 cut(s) | 434 |
| TaqI | TCGA | 1 cut(s) | 387 |
| TasI | AATT | 2 cut(s) | 110, 345 |
| TatI | WGTACW | 1 cut(s) | 283 |
| TfiI | GAWTC | 1 cut(s) | 335 |
| Tru1I | TTAA | 1 cut(s) | 233 |
| Tru9I | TTAA | 1 cut(s) | 233 |
| TseI | GCWGC | 3 cut(s) | 354, 357, 360 |
| TspDTI | ATGAA | 1 cut(s) | 80 |
| XmiI | GTMKAC | 1 cut(s) | 387 |
| XspI | CTAG | 1 cut(s) | 351 |