MADS-box protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 61 |
| AciI | CCGC | 1 cut(s) | 87 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 61, 109 |
| AgsI | TTSAA | 1 cut(s) | 200 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 220 |
| AjnI | CCWGG | 1 cut(s) | 102 |
| AluBI | AGCT | 3 cut(s) | 23, 28, 49 |
| AluI | AGCT | 3 cut(s) | 23, 28, 49 |
| Alw26I | GTCTC | 1 cut(s) | 228 |
| AoxI | GGCC | 1 cut(s) | 96 |
| AspS9I | GGNCC | 1 cut(s) | 89 |
| AsuC2I | CCSGG | 1 cut(s) | 75 |
| AsuHPI | GGTGA | 2 cut(s) | 76, 160 |
| AvaII | GGWCC | 1 cut(s) | 89 |
| BccI | CCATC | 2 cut(s) | 55, 107 |
| BciT130I | CCWGG | 1 cut(s) | 104 |
| BcnI | CCSGG | 1 cut(s) | 75 |
| BcoDI | GTCTC | 1 cut(s) | 228 |
| BlpI | GCTNAGC | 2 cut(s) | 24, 50 |
| Bme1390I | CCNGG | 2 cut(s) | 75, 104 |
| Bme18I | GGWCC | 1 cut(s) | 89 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 220 |
| BmgT120I | GGNCC | 1 cut(s) | 89 |
| BmrFI | CCNGG | 2 cut(s) | 75, 104 |
| BpmI | CTGGAG | 1 cut(s) | 125 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 24, 50 |
| BpuEI | CTTGAG | 1 cut(s) | 29 |
| BpuMI | CCSGG | 1 cut(s) | 75 |
| BsaWI | WCCGGW | 1 cut(s) | 91 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 61, 109 |
| Bse1I | ACTGG | 1 cut(s) | 237 |
| BseBI | CCWGG | 1 cut(s) | 104 |
| BseGI | GGATG | 1 cut(s) | 99 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 61, 109 |
| BseMII | CTCAG | 1 cut(s) | 15 |
| BseNI | ACTGG | 1 cut(s) | 237 |
| BseRI | GAGGAG | 1 cut(s) | 93 |
| BshFI | GGCC | 1 cut(s) | 98 |
| BsiSI | CCGG | 2 cut(s) | 75, 92 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 61, 109 |
| BsmAI | GTCTC | 1 cut(s) | 228 |
| BsnI | GGCC | 1 cut(s) | 98 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 24, 50 |
| BspACI | CCGC | 1 cut(s) | 87 |
| BspANI | GGCC | 1 cut(s) | 98 |
| BspCNI | CTCAG | 1 cut(s) | 16 |
| BsrI | ACTGG | 1 cut(s) | 237 |
| Bst2UI | CCWGG | 1 cut(s) | 104 |
| Bst4CI | ACNGT | 1 cut(s) | 185 |
| BstDEI | CTNAG | 2 cut(s) | 24, 50 |
| BstF5I | GGATG | 1 cut(s) | 99 |
| BstMAI | GTCTC | 1 cut(s) | 228 |
| BstNI | CCWGG | 1 cut(s) | 104 |
| BstSCI | CCNGG | 2 cut(s) | 73, 102 |
| BsuRI | GGCC | 1 cut(s) | 98 |
| BtsCI | GGATG | 1 cut(s) | 99 |
| Cfr13I | GGNCC | 1 cut(s) | 89 |
| CpoI | CGGWCCG | 1 cut(s) | 89 |
| CspI | CGGWCCG | 1 cut(s) | 89 |
| CviJI | RGCY | 6 cut(s) | 23, 28, 49, 54, 98, 158 |
| CviKI_1 | RGCY | 6 cut(s) | 23, 28, 49, 54, 98, 158 |
| DdeI | CTNAG | 2 cut(s) | 24, 50 |
| DriI | GACNNNNNGTC | 1 cut(s) | 220 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 220 |
| Eco47I | GGWCC | 1 cut(s) | 89 |
| EcoRII | CCWGG | 1 cut(s) | 102 |
| FokI | GGATG | 1 cut(s) | 86 |
| GsuI | CTGGAG | 1 cut(s) | 125 |
| HaeIII | GGCC | 1 cut(s) | 98 |
| HapII | CCGG | 2 cut(s) | 75, 92 |
| HinfI | GANTC | 1 cut(s) | 152 |
| HpaII | CCGG | 2 cut(s) | 75, 92 |
| HphI | GGTGA | 2 cut(s) | 76, 160 |
| Hpy188I | TCNGA | 2 cut(s) | 151, 214 |
| HpyAV | CCTTC | 1 cut(s) | 184 |
| HpyCH4III | ACNGT | 1 cut(s) | 185 |
| HpyF3I | CTNAG | 2 cut(s) | 24, 50 |
| LmnI | GCTCC | 2 cut(s) | 20, 215 |
| LpnPI | CCDG | 8 cut(s) | 59, 68, 88, 89, 105, 116, 131, 218 |
| MaeIII | GTNAC | 3 cut(s) | 69, 142, 166 |
| MboII | GAAGA | 3 cut(s) | 70, 146, 212 |
| MmeI | TCCRAC | 3 cut(s) | 90, 204, 237 |
| MnlI | CCTC | 2 cut(s) | 71, 88 |
| MspI | CCGG | 2 cut(s) | 75, 92 |
| MspR9I | CCNGG | 2 cut(s) | 75, 104 |
| MvaI | CCWGG | 1 cut(s) | 104 |
| NciI | CCSGG | 1 cut(s) | 75 |
| NmuCI | GTSAC | 2 cut(s) | 142, 166 |
| PfeI | GAWTC | 1 cut(s) | 152 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 61 |
| PfoI | TCCNGGA | 1 cut(s) | 102 |
| Psp6I | CCWGG | 1 cut(s) | 102 |
| PspGI | CCWGG | 1 cut(s) | 102 |
| PspPI | GGNCC | 1 cut(s) | 89 |
| Rsr2I | CGGWCCG | 1 cut(s) | 89 |
| RsrII | CGGWCCG | 1 cut(s) | 89 |
| Sau96I | GGNCC | 1 cut(s) | 89 |
| ScrFI | CCNGG | 2 cut(s) | 75, 104 |
| SetI | ASST | 6 cut(s) | 25, 30, 51, 120, 176, 221 |
| SinI | GGWCC | 1 cut(s) | 89 |
| SmlI | CTYRAG | 1 cut(s) | 8 |
| SmoI | CTYRAG | 1 cut(s) | 8 |
| SsiI | CCGC | 1 cut(s) | 87 |
| SspI | AATATT | 1 cut(s) | 127 |
| StyD4I | CCNGG | 2 cut(s) | 73, 102 |
| TaaI | ACNGT | 1 cut(s) | 185 |
| TfiI | GAWTC | 1 cut(s) | 152 |
| TseFI | GTSAC | 2 cut(s) | 142, 166 |
| Tsp45I | GTSAC | 2 cut(s) | 142, 166 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 61 |
| VpaK11BI | GGWCC | 1 cut(s) | 89 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 106 |