MADS-box protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 172 |
| Acc36I | ACCTGC | 1 cut(s) | 172 |
| AccII | CGCG | 1 cut(s) | 50 |
| AciI | CCGC | 5 cut(s) | 38, 48, 74, 434, 457 |
| AclWI | GGATC | 2 cut(s) | 436, 480 |
| AcoI | YGGCCR | 2 cut(s) | 25, 39 |
| AcuI | CTGAAG | 2 cut(s) | 91, 369 |
| AfaI | GTAC | 3 cut(s) | 313, 335, 766 |
| AgsI | TTSAA | 6 cut(s) | 195, 217, 421, 524, 548, 590 |
| AluBI | AGCT | 9 cut(s) | 105, 127, 131, 289, 306, 388, 394, 451, 484 |
| AluI | AGCT | 9 cut(s) | 105, 127, 131, 289, 306, 388, 394, 451, 484 |
| Alw21I | GWGCWC | 1 cut(s) | 390 |
| Alw26I | GTCTC | 2 cut(s) | 89, 196 |
| AlwI | GGATC | 2 cut(s) | 436, 480 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 114, 580 |
| Ama87I | CYCGRG | 1 cut(s) | 446 |
| AoxI | GGCC | 2 cut(s) | 25, 39 |
| ApeKI | GCWGC | 2 cut(s) | 131, 373 |
| AseI | ATTAAT | 1 cut(s) | 402 |
| AsuHPI | GGTGA | 2 cut(s) | 54, 196 |
| AsuNHI | GCTAGC | 1 cut(s) | 127 |
| AvaI | CYCGRG | 1 cut(s) | 446 |
| BanII | GRGCYC | 1 cut(s) | 390 |
| Bbv12I | GWGCWC | 1 cut(s) | 390 |
| BbvCI | CCTCAGC | 1 cut(s) | 252 |
| BbvI | GCAGC | 2 cut(s) | 118, 385 |
| BccI | CCATC | 1 cut(s) | 454 |
| BceAI | ACGGC | 1 cut(s) | 12 |
| BcoDI | GTCTC | 2 cut(s) | 89, 196 |
| BfaI | CTAG | 2 cut(s) | 128, 476 |
| BfmI | CTRYAG | 1 cut(s) | 760 |
| BfuAI | ACCTGC | 1 cut(s) | 172 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 178 |
| BglII | AGATCT | 1 cut(s) | 699 |
| BisI | GCNGC | 3 cut(s) | 39, 132, 374 |
| BlsI | GCNGC | 3 cut(s) | 40, 133, 375 |
| BmcAI | AGTACT | 1 cut(s) | 766 |
| BmeT110I | CYCGRG | 1 cut(s) | 446 |
| BmiI | GGNNCC | 1 cut(s) | 748 |
| BmsI | GCATC | 2 cut(s) | 636, 737 |
| BmtI | GCTAGC | 1 cut(s) | 131 |
| BpmI | CTGGAG | 4 cut(s) | 286, 292, 374, 416 |
| Bpu10I | CCTNAGC | 3 cut(s) | 252, 384, 452 |
| BsaI | GGTCTC | 1 cut(s) | 89 |
| Bse118I | RCCGGY | 2 cut(s) | 172, 281 |
| Bse1I | ACTGG | 3 cut(s) | 309, 679, 772 |
| Bse3DI | GCAATG | 1 cut(s) | 324 |
| BseGI | GGATG | 4 cut(s) | 325, 417, 465, 651 |
| BseMI | GCAATG | 1 cut(s) | 324 |
| BseMII | CTCAG | 3 cut(s) | 243, 375, 547 |
| BseNI | ACTGG | 3 cut(s) | 309, 679, 772 |
| BseRI | GAGGAG | 1 cut(s) | 214 |
| BseXI | GCAGC | 2 cut(s) | 118, 385 |
| BsgI | GTGCAG | 1 cut(s) | 100 |
| Bsh1236I | CGCG | 1 cut(s) | 50 |
| BshFI | GGCC | 2 cut(s) | 27, 41 |
| BsiHKAI | GWGCWC | 1 cut(s) | 390 |
| BsiHKCI | CYCGRG | 1 cut(s) | 446 |
| BsiSI | CCGG | 3 cut(s) | 173, 225, 282 |
| BsmAI | GTCTC | 2 cut(s) | 89, 196 |
| BsnI | GGCC | 2 cut(s) | 27, 41 |
| Bso31I | GGTCTC | 1 cut(s) | 89 |
| BsoBI | CYCGRG | 1 cut(s) | 446 |
| Bsp1286I | GDGCHC | 1 cut(s) | 390 |
| Bsp143I | GATC | 3 cut(s) | 441, 472, 699 |
| BspACI | CCGC | 5 cut(s) | 38, 48, 74, 434, 457 |
| BspANI | GGCC | 2 cut(s) | 27, 41 |
| BspCNI | CTCAG | 3 cut(s) | 244, 376, 546 |
| BspFNI | CGCG | 1 cut(s) | 50 |
| BspLI | GGNNCC | 1 cut(s) | 748 |
| BspMI | ACCTGC | 1 cut(s) | 172 |
| BspOI | GCTAGC | 1 cut(s) | 131 |
| BspPI | GGATC | 2 cut(s) | 436, 480 |
| BspQI | GCTCTTC | 1 cut(s) | 474 |
| BspTNI | GGTCTC | 1 cut(s) | 89 |
| BsrDI | GCAATG | 1 cut(s) | 324 |
| BsrFI | RCCGGY | 2 cut(s) | 172, 281 |
| BsrI | ACTGG | 3 cut(s) | 309, 679, 772 |
| BssAI | RCCGGY | 2 cut(s) | 172, 281 |
| BssMI | GATC | 3 cut(s) | 441, 472, 699 |
| Bst4CI | ACNGT | 2 cut(s) | 11, 764 |
| Bst6I | CTCTTC | 1 cut(s) | 474 |
| BstC8I | GCNNGC | 6 cut(s) | 16, 48, 78, 129, 174, 287 |
| BstDEI | CTNAG | 4 cut(s) | 252, 384, 452, 533 |
| BstEII | GGTNACC | 1 cut(s) | 770 |
| BstF5I | GGATG | 4 cut(s) | 325, 417, 465, 651 |
| BstFNI | CGCG | 1 cut(s) | 50 |
| BstKTI | GATC | 3 cut(s) | 444, 475, 702 |
| BstMAI | GTCTC | 2 cut(s) | 89, 196 |
| BstMBI | GATC | 3 cut(s) | 441, 472, 699 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 24, 47, 178, 257 |
| BstPI | GGTNACC | 1 cut(s) | 770 |
| BstSFI | CTRYAG | 1 cut(s) | 760 |
| BstUI | CGCG | 1 cut(s) | 50 |
| BstV1I | GCAGC | 2 cut(s) | 118, 385 |
| BstX2I | RGATCY | 3 cut(s) | 441, 472, 699 |
| BstYI | RGATCY | 3 cut(s) | 441, 472, 699 |
| BsuRI | GGCC | 2 cut(s) | 27, 41 |
| BtsCI | GGATG | 4 cut(s) | 325, 417, 465, 651 |
| BtsI | GCAGTG | 1 cut(s) | 544 |
| BtsIMutI | CAGTG | 2 cut(s) | 345, 544 |
| BveI | ACCTGC | 1 cut(s) | 172 |
| Cac8I | GCNNGC | 6 cut(s) | 16, 48, 78, 129, 174, 287 |
| CaiI | CAGNNNCTG | 2 cut(s) | 114, 580 |
| Cfr10I | RCCGGY | 2 cut(s) | 172, 281 |
| CseI | GACGC | 1 cut(s) | 257 |
| Csp6I | GTAC | 3 cut(s) | 312, 334, 765 |
| CviQI | GTAC | 3 cut(s) | 312, 334, 765 |
| DdeI | CTNAG | 4 cut(s) | 252, 384, 452, 533 |
| DpnI | GATC | 3 cut(s) | 443, 474, 701 |
| DpnII | GATC | 3 cut(s) | 441, 472, 699 |
| EaeI | YGGCCR | 2 cut(s) | 25, 39 |
| Eam1104I | CTCTTC | 1 cut(s) | 474 |
| EarI | CTCTTC | 1 cut(s) | 474 |
| EciI | GGCGGA | 1 cut(s) | 472 |
| Ecl136II | GAGCTC | 1 cut(s) | 388 |
| Eco24I | GRGCYC | 1 cut(s) | 390 |
| Eco31I | GGTCTC | 1 cut(s) | 89 |
| Eco53kI | GAGCTC | 1 cut(s) | 388 |
| Eco57I | CTGAAG | 2 cut(s) | 91, 369 |
| Eco88I | CYCGRG | 1 cut(s) | 446 |
| Eco91I | GGTNACC | 1 cut(s) | 770 |
| EcoICRI | GAGCTC | 1 cut(s) | 388 |
| EcoO65I | GGTNACC | 1 cut(s) | 770 |
| EcoT38I | GRGCYC | 1 cut(s) | 390 |
| FaiI | YATR | 6 cut(s) | 6, 137, 294, 491, 569, 725 |
| FauI | CCCGC | 1 cut(s) | 55 |
| Fnu4HI | GCNGC | 3 cut(s) | 39, 132, 374 |
| FokI | GGATG | 4 cut(s) | 332, 424, 472, 658 |
| FriOI | GRGCYC | 1 cut(s) | 390 |
| Fsp4HI | GCNGC | 3 cut(s) | 39, 132, 374 |
| FspBI | CTAG | 2 cut(s) | 128, 476 |
| GluI | GCNGC | 3 cut(s) | 39, 132, 374 |
| GsuI | CTGGAG | 4 cut(s) | 286, 292, 374, 416 |
| HaeIII | GGCC | 2 cut(s) | 27, 41 |
| HapII | CCGG | 3 cut(s) | 173, 225, 282 |
| HgaI | GACGC | 1 cut(s) | 257 |
| HincII | GTYRAC | 2 cut(s) | 85, 609 |
| HindII | GTYRAC | 2 cut(s) | 85, 609 |
| HindIII | AAGCTT | 1 cut(s) | 103 |
| HinfI | GANTC | 6 cut(s) | 296, 531, 571, 577, 692, 734 |
| HpaII | CCGG | 3 cut(s) | 173, 225, 282 |
| HphI | GGTGA | 2 cut(s) | 54, 196 |
| Hpy166II | GTNNAC | 3 cut(s) | 54, 85, 609 |
| Hpy188I | TCNGA | 4 cut(s) | 33, 576, 697, 733 |
| Hpy188III | TCNNGA | 3 cut(s) | 217, 383, 476 |
| Hpy8I | GTNNAC | 3 cut(s) | 54, 85, 609 |
| Hpy99I | CGWCG | 1 cut(s) | 251 |
| HpyAV | CCTTC | 3 cut(s) | 310, 518, 547 |
| HpyCH4III | ACNGT | 2 cut(s) | 11, 764 |
| HpyCH4IV | ACGT | 1 cut(s) | 188 |
| HpyCH4V | TGCA | 5 cut(s) | 18, 117, 329, 343, 502 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 24, 47, 178, 257 |
| HpyF3I | CTNAG | 4 cut(s) | 252, 384, 452, 533 |
| HpySE526I | ACGT | 1 cut(s) | 188 |
| KroI | GCCGGC | 1 cut(s) | 172 |
| KroNI | GCCGGC | 1 cut(s) | 174 |
| Kzo9I | GATC | 3 cut(s) | 441, 472, 699 |
| LguI | GCTCTTC | 1 cut(s) | 474 |
| LmnI | GCTCC | 2 cut(s) | 311, 393 |
| Lsp1109I | GCAGC | 2 cut(s) | 118, 385 |
| LweI | GCATC | 2 cut(s) | 636, 737 |
| MaeI | CTAG | 2 cut(s) | 128, 476 |
| MaeII | ACGT | 1 cut(s) | 188 |
| MaeIII | GTNAC | 3 cut(s) | 184, 639, 770 |
| MalI | GATC | 3 cut(s) | 443, 474, 701 |
| MboI | GATC | 3 cut(s) | 441, 472, 699 |
| MboII | GAAGA | 6 cut(s) | 169, 267, 362, 491, 725, 728 |
| MflI | RGATCY | 3 cut(s) | 441, 472, 699 |
| MhlI | GDGCHC | 1 cut(s) | 390 |
| MluCI | AATT | 3 cut(s) | 338, 497, 626 |
| MlyI | GAGTC | 4 cut(s) | 305, 525, 580, 701 |
| MmeI | TCCRAC | 1 cut(s) | 675 |
| MroNI | GCCGGC | 1 cut(s) | 172 |
| MseI | TTAA | 2 cut(s) | 402, 629 |
| MspA1I | CMGCKG | 1 cut(s) | 394 |
| MspI | CCGG | 3 cut(s) | 173, 225, 282 |
| MvnI | CGCG | 1 cut(s) | 50 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 24, 47, 178, 257 |
| NaeI | GCCGGC | 1 cut(s) | 174 |
| NdeII | GATC | 3 cut(s) | 441, 472, 699 |
| NgoMIV | GCCGGC | 1 cut(s) | 172 |
| NheI | GCTAGC | 1 cut(s) | 127 |
| NlaIV | GGNNCC | 1 cut(s) | 748 |
| NmuCI | GTSAC | 1 cut(s) | 184 |
| PaeR7I | CTCGAG | 1 cut(s) | 446 |
| PaqCI | CACCTGC | 1 cut(s) | 172 |
| PciSI | GCTCTTC | 1 cut(s) | 474 |
| PdiI | GCCGGC | 1 cut(s) | 174 |
| PfeI | GAWTC | 2 cut(s) | 577, 734 |
| PkrI | GCNGC | 3 cut(s) | 40, 133, 375 |
| PleI | GAGTC | 4 cut(s) | 304, 525, 579, 700 |
| PpsI | GAGTC | 4 cut(s) | 304, 525, 579, 700 |
| PshBI | ATTAAT | 1 cut(s) | 402 |
| Psp124BI | GAGCTC | 1 cut(s) | 390 |
| PspEI | GGTNACC | 1 cut(s) | 770 |
| PspN4I | GGNNCC | 1 cut(s) | 748 |
| PspXI | VCTCGAGB | 1 cut(s) | 446 |
| PstNI | CAGNNNCTG | 2 cut(s) | 114, 580 |
| PsuI | RGATCY | 3 cut(s) | 441, 472, 699 |
| PvuII | CAGCTG | 1 cut(s) | 394 |
| RsaI | GTAC | 3 cut(s) | 313, 335, 766 |
| RsaNI | GTAC | 3 cut(s) | 312, 334, 765 |
| SacI | GAGCTC | 1 cut(s) | 390 |
| SapI | GCTCTTC | 1 cut(s) | 474 |
| SaqAI | TTAA | 2 cut(s) | 402, 629 |
| SatI | GCNGC | 3 cut(s) | 39, 132, 374 |
| Sau3AI | GATC | 3 cut(s) | 441, 472, 699 |
| ScaI | AGTACT | 1 cut(s) | 766 |
| SchI | GAGTC | 4 cut(s) | 305, 525, 580, 701 |
| SduI | GDGCHC | 1 cut(s) | 390 |
| SfaNI | GCATC | 2 cut(s) | 636, 737 |
| SfcI | CTRYAG | 1 cut(s) | 760 |
| Sfr274I | CTCGAG | 1 cut(s) | 446 |
| SlaI | CTCGAG | 1 cut(s) | 446 |
| SmlI | CTYRAG | 1 cut(s) | 446 |
| SmoI | CTYRAG | 1 cut(s) | 446 |
| Sse9I | AATT | 3 cut(s) | 338, 497, 626 |
| SsiI | CCGC | 5 cut(s) | 38, 48, 74, 434, 457 |
| SspMI | CTAG | 2 cut(s) | 128, 476 |
| SstI | GAGCTC | 1 cut(s) | 390 |
| TaaI | ACNGT | 2 cut(s) | 11, 764 |
| TaiI | ACGT | 1 cut(s) | 191 |
| TaqI | TCGA | 1 cut(s) | 447 |
| TasI | AATT | 3 cut(s) | 338, 497, 626 |
| TatI | WGTACW | 1 cut(s) | 764 |
| TauI | GCSGC | 1 cut(s) | 41 |
| TfiI | GAWTC | 2 cut(s) | 577, 734 |
| Tru1I | TTAA | 2 cut(s) | 402, 629 |
| Tru9I | TTAA | 2 cut(s) | 402, 629 |
| TscAI | CASTG | 2 cut(s) | 352, 544 |
| TseFI | GTSAC | 1 cut(s) | 184 |
| TseI | GCWGC | 2 cut(s) | 131, 373 |
| Tsp45I | GTSAC | 1 cut(s) | 184 |
| TspDTI | ATGAA | 4 cut(s) | 152, 510, 678, 726 |
| TspGWI | ACGGA | 1 cut(s) | 658 |
| TspRI | CASTG | 2 cut(s) | 352, 544 |
| VspI | ATTAAT | 1 cut(s) | 402 |
| XbaI | TCTAGA | 1 cut(s) | 475 |
| XhoI | CTCGAG | 1 cut(s) | 446 |
| XspI | CTAG | 2 cut(s) | 128, 476 |
| ZrmI | AGTACT | 1 cut(s) | 766 |