MADS-box protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 37 |
| Acc36I | ACCTGC | 2 cut(s) | 37, 42 |
| AclWI | GGATC | 2 cut(s) | 301, 345 |
| AcuI | CTGAAG | 1 cut(s) | 234 |
| AfaI | GTAC | 4 cut(s) | 178, 200, 408, 631 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 707 |
| AgsI | TTSAA | 6 cut(s) | 60, 82, 194, 389, 413, 455 |
| AhlI | ACTAGT | 1 cut(s) | 632 |
| AluBI | AGCT | 7 cut(s) | 154, 171, 253, 259, 316, 349, 539 |
| AluI | AGCT | 7 cut(s) | 154, 171, 253, 259, 316, 349, 539 |
| Alw21I | GWGCWC | 1 cut(s) | 255 |
| Alw26I | GTCTC | 1 cut(s) | 61 |
| AlwI | GGATC | 2 cut(s) | 301, 345 |
| ApeKI | GCWGC | 2 cut(s) | 238, 621 |
| AspS9I | GGNCC | 1 cut(s) | 232 |
| AsuC2I | CCSGG | 1 cut(s) | 404 |
| AsuHPI | GGTGA | 1 cut(s) | 61 |
| AvaII | GGWCC | 1 cut(s) | 232 |
| BanII | GRGCYC | 1 cut(s) | 255 |
| Bbv12I | GWGCWC | 1 cut(s) | 255 |
| BbvCI | CCTCAGC | 1 cut(s) | 117 |
| BbvI | GCAGC | 2 cut(s) | 250, 608 |
| BccI | CCATC | 2 cut(s) | 319, 521 |
| BcnI | CCSGG | 1 cut(s) | 404 |
| BcoDI | GTCTC | 1 cut(s) | 61 |
| BcuI | ACTAGT | 1 cut(s) | 632 |
| BfaI | CTAG | 3 cut(s) | 341, 540, 633 |
| BfuAI | ACCTGC | 2 cut(s) | 37, 42 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 43 |
| BglII | AGATCT | 1 cut(s) | 564 |
| BisI | GCNGC | 2 cut(s) | 239, 622 |
| BlsI | GCNGC | 2 cut(s) | 240, 623 |
| Bme1390I | CCNGG | 1 cut(s) | 404 |
| Bme18I | GGWCC | 1 cut(s) | 232 |
| BmgT120I | GGNCC | 1 cut(s) | 232 |
| BmiI | GGNNCC | 1 cut(s) | 233 |
| BmrFI | CCNGG | 1 cut(s) | 404 |
| BmsI | GCATC | 2 cut(s) | 501, 602 |
| BpmI | CTGGAG | 5 cut(s) | 151, 157, 239, 281, 296 |
| Bpu10I | CCTNAGC | 3 cut(s) | 117, 249, 317 |
| BpuMI | CCSGG | 1 cut(s) | 404 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 149, 179 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 707 |
| Bse118I | RCCGGY | 2 cut(s) | 37, 617 |
| Bse1I | ACTGG | 2 cut(s) | 151, 174 |
| BseGI | GGATG | 3 cut(s) | 190, 427, 516 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 707 |
| BseMII | CTCAG | 3 cut(s) | 108, 240, 412 |
| BseNI | ACTGG | 2 cut(s) | 151, 174 |
| BseRI | GAGGAG | 2 cut(s) | 79, 655 |
| BseXI | GCAGC | 2 cut(s) | 250, 608 |
| BsiHKAI | GWGCWC | 1 cut(s) | 255 |
| BsiSI | CCGG | 4 cut(s) | 38, 90, 403, 618 |
| BslFI | GGGAC | 1 cut(s) | 245 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 707 |
| BsmAI | GTCTC | 1 cut(s) | 61 |
| BsmFI | GGGAC | 1 cut(s) | 245 |
| Bsp1286I | GDGCHC | 1 cut(s) | 255 |
| Bsp143I | GATC | 4 cut(s) | 9, 306, 337, 564 |
| BspCNI | CTCAG | 3 cut(s) | 109, 241, 411 |
| BspLI | GGNNCC | 1 cut(s) | 233 |
| BspMI | ACCTGC | 2 cut(s) | 37, 42 |
| BspPI | GGATC | 2 cut(s) | 301, 345 |
| BspQI | GCTCTTC | 1 cut(s) | 339 |
| BsrFI | RCCGGY | 2 cut(s) | 37, 617 |
| BsrI | ACTGG | 2 cut(s) | 151, 174 |
| BssAI | RCCGGY | 2 cut(s) | 37, 617 |
| BssMI | GATC | 4 cut(s) | 9, 306, 337, 564 |
| Bst6I | CTCTTC | 1 cut(s) | 339 |
| BstC8I | GCNNGC | 2 cut(s) | 39, 152 |
| BstDEI | CTNAG | 5 cut(s) | 117, 249, 317, 398, 417 |
| BstF5I | GGATG | 3 cut(s) | 190, 427, 516 |
| BstKTI | GATC | 4 cut(s) | 12, 309, 340, 567 |
| BstMAI | GTCTC | 1 cut(s) | 61 |
| BstMBI | GATC | 4 cut(s) | 9, 306, 337, 564 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 43, 122 |
| BstSCI | CCNGG | 1 cut(s) | 402 |
| BstV1I | GCAGC | 2 cut(s) | 250, 608 |
| BstX2I | RGATCY | 3 cut(s) | 306, 337, 564 |
| BstYI | RGATCY | 3 cut(s) | 306, 337, 564 |
| BtsCI | GGATG | 3 cut(s) | 190, 427, 516 |
| BveI | ACCTGC | 2 cut(s) | 37, 42 |
| Cac8I | GCNNGC | 2 cut(s) | 39, 152 |
| Cfr10I | RCCGGY | 2 cut(s) | 37, 617 |
| Cfr13I | GGNCC | 1 cut(s) | 232 |
| CseI | GACGC | 1 cut(s) | 122 |
| Csp6I | GTAC | 4 cut(s) | 177, 199, 407, 630 |
| CviAII | CATG | 1 cut(s) | 277 |
| CviQI | GTAC | 4 cut(s) | 177, 199, 407, 630 |
| DdeI | CTNAG | 5 cut(s) | 117, 249, 317, 398, 417 |
| DpnI | GATC | 4 cut(s) | 11, 308, 339, 566 |
| DpnII | GATC | 4 cut(s) | 9, 306, 337, 564 |
| Eam1104I | CTCTTC | 1 cut(s) | 339 |
| EarI | CTCTTC | 1 cut(s) | 339 |
| Ecl136II | GAGCTC | 1 cut(s) | 253 |
| Eco24I | GRGCYC | 1 cut(s) | 255 |
| Eco47I | GGWCC | 1 cut(s) | 232 |
| Eco53kI | GAGCTC | 1 cut(s) | 253 |
| Eco57I | CTGAAG | 1 cut(s) | 234 |
| EcoICRI | GAGCTC | 1 cut(s) | 253 |
| EcoT38I | GRGCYC | 1 cut(s) | 255 |
| FaeI | CATG | 1 cut(s) | 280 |
| FaiI | YATR | 5 cut(s) | 278, 356, 434, 590, 627 |
| FaqI | GGGAC | 1 cut(s) | 245 |
| FatI | CATG | 1 cut(s) | 276 |
| Fnu4HI | GCNGC | 2 cut(s) | 239, 622 |
| FokI | GGATG | 3 cut(s) | 197, 434, 523 |
| FriOI | GRGCYC | 1 cut(s) | 255 |
| Fsp4HI | GCNGC | 2 cut(s) | 239, 622 |
| FspBI | CTAG | 3 cut(s) | 341, 540, 633 |
| GluI | GCNGC | 2 cut(s) | 239, 622 |
| GsuI | CTGGAG | 5 cut(s) | 151, 157, 239, 281, 296 |
| HapII | CCGG | 4 cut(s) | 38, 90, 403, 618 |
| HgaI | GACGC | 1 cut(s) | 122 |
| Hin1II | CATG | 1 cut(s) | 280 |
| HincII | GTYRAC | 1 cut(s) | 474 |
| HindII | GTYRAC | 1 cut(s) | 474 |
| HinfI | GANTC | 6 cut(s) | 161, 396, 436, 557, 599, 662 |
| HpaII | CCGG | 4 cut(s) | 38, 90, 403, 618 |
| HphI | GGTGA | 1 cut(s) | 61 |
| Hpy166II | GTNNAC | 2 cut(s) | 223, 474 |
| Hpy188I | TCNGA | 4 cut(s) | 214, 562, 598, 670 |
| Hpy188III | TCNNGA | 4 cut(s) | 13, 82, 248, 341 |
| Hpy8I | GTNNAC | 2 cut(s) | 223, 474 |
| Hpy99I | CGWCG | 1 cut(s) | 116 |
| HpyAV | CCTTC | 3 cut(s) | 175, 383, 578 |
| HpyCH4IV | ACGT | 1 cut(s) | 53 |
| HpyCH4V | TGCA | 3 cut(s) | 208, 276, 367 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 43, 122 |
| HpyF3I | CTNAG | 5 cut(s) | 117, 249, 317, 398, 417 |
| HpySE526I | ACGT | 1 cut(s) | 53 |
| Hsp92II | CATG | 1 cut(s) | 280 |
| KroI | GCCGGC | 1 cut(s) | 37 |
| KroNI | GCCGGC | 1 cut(s) | 39 |
| Kzo9I | GATC | 4 cut(s) | 9, 306, 337, 564 |
| LguI | GCTCTTC | 1 cut(s) | 339 |
| LmnI | GCTCC | 3 cut(s) | 176, 258, 464 |
| Lsp1109I | GCAGC | 2 cut(s) | 250, 608 |
| LweI | GCATC | 2 cut(s) | 501, 602 |
| MaeI | CTAG | 3 cut(s) | 341, 540, 633 |
| MaeII | ACGT | 1 cut(s) | 53 |
| MaeIII | GTNAC | 2 cut(s) | 49, 437 |
| MalI | GATC | 4 cut(s) | 11, 308, 339, 566 |
| MboI | GATC | 4 cut(s) | 9, 306, 337, 564 |
| MboII | GAAGA | 6 cut(s) | 34, 227, 356, 590, 593, 639 |
| MflI | RGATCY | 3 cut(s) | 306, 337, 564 |
| MhlI | GDGCHC | 1 cut(s) | 255 |
| MluCI | AATT | 3 cut(s) | 95, 203, 491 |
| MlyI | GAGTC | 5 cut(s) | 170, 390, 445, 566, 656 |
| MroNI | GCCGGC | 1 cut(s) | 37 |
| MseI | TTAA | 1 cut(s) | 494 |
| MspA1I | CMGCKG | 1 cut(s) | 259 |
| MspI | CCGG | 4 cut(s) | 38, 90, 403, 618 |
| MspR9I | CCNGG | 1 cut(s) | 404 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 43, 122 |
| NaeI | GCCGGC | 1 cut(s) | 39 |
| NciI | CCSGG | 1 cut(s) | 404 |
| NdeII | GATC | 4 cut(s) | 9, 306, 337, 564 |
| NgoMIV | GCCGGC | 1 cut(s) | 37 |
| NlaIII | CATG | 1 cut(s) | 280 |
| NlaIV | GGNNCC | 1 cut(s) | 233 |
| NmuCI | GTSAC | 2 cut(s) | 49, 437 |
| PaqCI | CACCTGC | 1 cut(s) | 37 |
| PciSI | GCTCTTC | 1 cut(s) | 339 |
| PdiI | GCCGGC | 1 cut(s) | 39 |
| PfeI | GAWTC | 1 cut(s) | 599 |
| PkrI | GCNGC | 2 cut(s) | 240, 623 |
| PleI | GAGTC | 5 cut(s) | 169, 390, 444, 565, 656 |
| PpsI | GAGTC | 5 cut(s) | 169, 390, 444, 565, 656 |
| Psp124BI | GAGCTC | 1 cut(s) | 255 |
| PspN4I | GGNNCC | 1 cut(s) | 233 |
| PspPI | GGNCC | 1 cut(s) | 232 |
| PsuI | RGATCY | 3 cut(s) | 306, 337, 564 |
| PvuII | CAGCTG | 1 cut(s) | 259 |
| RsaI | GTAC | 4 cut(s) | 178, 200, 408, 631 |
| RsaNI | GTAC | 4 cut(s) | 177, 199, 407, 630 |
| SacI | GAGCTC | 1 cut(s) | 255 |
| SapI | GCTCTTC | 1 cut(s) | 339 |
| SaqAI | TTAA | 1 cut(s) | 494 |
| SatI | GCNGC | 2 cut(s) | 239, 622 |
| Sau3AI | GATC | 4 cut(s) | 9, 306, 337, 564 |
| Sau96I | GGNCC | 1 cut(s) | 232 |
| SchI | GAGTC | 5 cut(s) | 170, 390, 445, 566, 656 |
| ScrFI | CCNGG | 1 cut(s) | 404 |
| SduI | GDGCHC | 1 cut(s) | 255 |
| SfaNI | GCATC | 2 cut(s) | 501, 602 |
| SinI | GGWCC | 1 cut(s) | 232 |
| SpeI | ACTAGT | 1 cut(s) | 632 |
| Sse9I | AATT | 3 cut(s) | 95, 203, 491 |
| SspMI | CTAG | 3 cut(s) | 341, 540, 633 |
| SstI | GAGCTC | 1 cut(s) | 255 |
| StyD4I | CCNGG | 1 cut(s) | 402 |
| TaiI | ACGT | 1 cut(s) | 56 |
| TasI | AATT | 3 cut(s) | 95, 203, 491 |
| TfiI | GAWTC | 1 cut(s) | 599 |
| Tru1I | TTAA | 1 cut(s) | 494 |
| Tru9I | TTAA | 1 cut(s) | 494 |
| TseFI | GTSAC | 2 cut(s) | 49, 437 |
| TseI | GCWGC | 2 cut(s) | 238, 621 |
| Tsp45I | GTSAC | 2 cut(s) | 49, 437 |
| TspDTI | ATGAA | 3 cut(s) | 17, 438, 591 |
| TspGWI | ACGGA | 1 cut(s) | 91 |
| VpaK11BI | GGWCC | 1 cut(s) | 232 |
| XbaI | TCTAGA | 1 cut(s) | 340 |
| XspI | CTAG | 3 cut(s) | 341, 540, 633 |