Prupe.1G549700_v2.0.a1
ERF Family

P-loop nucleoside triphosphate hydrolase superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000615
Physical Location & Seq
Reverse (-)
44932336 .. 44937207
4872 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G549700.2

Sequence Viewer

Length: 1011 bp
ATGGGTGGAAGTTCGATTGATGATGACTGGGAGCTTCCTTCACTGTCTAGTGCAGTTCGCACTGTGGTCTTAGTTGGACGTACTGGTAATGGAAAAAGTGCAACAGGAAACAGTATTCTTGGAAGAAAGGCCTTCAAGTCCAAGACCAGCTCCTCTGGTGTTACAAGCACTTGTGAATTGGAGAAAGCTGTATTGAGAGATGGACAAGTTGTAAATGTTATAGACACTCCTGGTCTTTTTGATTTTTCTGCCAGGTCAGACTTTGTTGGCAAAGAAATTGTCAAATGCATTGATTTGGCCAAGGATGGAATCCATGCTGTTCTTGTAACTTTCTCAGTTAGGACCCGGTTTTCACAAGAAGAAGAAGCCGCACTACGTAGCTTGCAAACTTTGTTTGGAAGCAAAATTATTGATTACATGATTGTGGTCTTTACTGGCGGAGATGACCTTGAAGAAAATGATGAGACGTTGGAAGACTATTTGGGCCGTGAATGTCCAGAGCCTTTAAAGGAAATCCTTGTTCTGTGTGAAAATCGCTGTGTGCTTTTTGATAACAAGACTAAGGATGAAAGTAAGAGGGTTCAACAAGTGCAGCATCTTCTCTCCCTTGTAAACAAGGTCATAGCTCAGAATGGTGGACGACCGTACACTGATGAGATATTTGCTGAAGTGAAGAGAGGGGCTATTAAACTCCGTGATCAACAAGAAGAGGTTAATTCCTTGAAGGGGTATTCTAAACGAGAAATATCAGATTTGAAGAATCAGATGCAGCGTGCATATGAAGAGCAGCTTACACGAATTACTGAGATGGTTGAGTCAAAGTTAAGAGAGACCACTATTAGGCTTGAGCAACAGCTGGCAGATGAACAAGCTGCTCGACTGAGAGCAGAAGAGAATGCCCAAATGGCTCAGATGAGGTCGGATGATGAAATTCGAAAGCTTAGAGAAAATCTTATGAGAGCAGAGGAAGAGCTTCGTAAAAGAGGTGAAGGCAAGTGTGCCATTCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AIG1

Protein Analysis

337

Amino Acids

37.79

Weight (kDa)

5.24

Isoelectric Point (pI)

42.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000615)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33970 AT1G33970 AT1G33970 AT1G33970 AT1G33970
fragaria_vesca FvH4_5g32530 FvH4_5g32530
malus_domestica MD15G1403700.v1.1
prunus_persica Prupe.1G549700_v2.0.a1 Prupe.1G549700_v2.0.a1
pyrus_communis pycom15g36100
rosa_chinensis RchiOBHm_Chr7g0226331 RchiOBHm_Chr7g0229101 RchiOBHm_Chr7g0229111 RchiOBHm_Chr7g0229141 RchiOBHm_Chr7g0229161 RchiOBHm_Chr7g0229171 RchiOBHm_Chr7g0229211 RchiOBHm_Chr7g0229241 RchiOBHm_Chr7g0229381 RchiOBHm_Chr7g0229761 RchiOBHm_Chr7g0229911
rosa_laevigata RLG00000000796 RLG00000001464 RLG00000001466 RLG00000001469 RLG00000001523 RLG00000001526 RLG00000001529 RLG00000001530 RLG00000001749 RLG00000001913 RLG00000002114 RLG00000002115 RLG00000023248 RLG00000023250
rosa_multiflora Rmu_co8281135.1_g000001 Rmu_sc0000271.1_g000002 Rmu_sc0000271.1_g000007 Rmu_sc0000271.1_g000014 Rmu_sc0000693.1_g000012 Rmu_sc0000693.1_g000015 Rmu_sc0000693.1_g000023 Rmu_sc0001044.1_g000005 Rmu_sc0006689.1_g000007 Rmu_sc0012733.1_g000005
rosa_roxburghii Rroxscaffold_3G00230540 Rroxscaffold_3G00230590 Rroxscaffold_3G00230600 Rroxscaffold_3G00230700 Rroxscaffold_3G00230710 Rroxscaffold_3G00232980 Rroxscaffold_3G00237610
rosa_rugosa Rorug07G0203800 Rorug07G0203900 Rorug07G0256100 Rorug07G0256400 Rorug07G0256400 Rorug07G0256400 Rorug07G0256500 Rorug07G0256600 Rorug07G0256600 Rorug07G0257100 Rorug07G0257200 Rorug07G0257300 Rorug07G0257400
rosa_samantha Rh7DG401100 Rh7DG401300 Rh7DG401900 Rh7DG402100 Rh7DG402300 Rh7DG402700
rosa_wichuraiana Rw0G001910 Rw0G001930 Rw0G001940 Rw7G033790 Rw7G033810 Rw7G033840 Rw7G033900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 369, 438
AcoI YGGCCR 1 cut(s) 297
AcsI RAATTY 1 cut(s) 930
AcuI CTGAAG 1 cut(s) 687
AfaI GTAC 2 cut(s) 82, 647
AfiI CCNNNNNNNGG 2 cut(s) 726, 840
AgsI TTSAA 5 cut(s) 136, 452, 584, 724, 757
AjnI CCWGG 2 cut(s) 229, 251
Alw26I GTCTC 2 cut(s) 458, 824
AoxI GGCC 3 cut(s) 129, 297, 484
ApeKI GCWGC 4 cut(s) 592, 769, 787, 872
ApoI RAATTY 1 cut(s) 930
ArsI GACNNNNNNTTYG 2 cut(s) 264, 296
Asp700I GAANNNNTTC 1 cut(s) 972
AspS9I GGNCC 2 cut(s) 342, 484
AsuC2I CCSGG 1 cut(s) 346
AsuHPI GGTGA 1 cut(s) 998
AsuII TTCGAA 1 cut(s) 934
AvaII GGWCC 1 cut(s) 342
BalI TGGCCA 1 cut(s) 299
BarI GAAGNNNNNNTAC 2 cut(s) 357, 389
BbsI GAAGAC 1 cut(s) 480
BbvI GCAGC 4 cut(s) 604, 781, 799, 859
BccI CCATC 3 cut(s) 194, 299, 802
BceAI ACGGC 1 cut(s) 471
BciT130I CCWGG 2 cut(s) 231, 253
BclI TGATCA 1 cut(s) 697
BcnI CCSGG 1 cut(s) 346
BcoDI GTCTC 2 cut(s) 458, 824
BfaI CTAG 1 cut(s) 48
BglI GCCNNNNNGGC 1 cut(s) 905
BisI GCNGC 5 cut(s) 369, 593, 770, 788, 873
BlsI GCNGC 5 cut(s) 370, 594, 771, 789, 874
Bme1390I CCNGG 3 cut(s) 231, 253, 346
Bme18I GGWCC 1 cut(s) 342
BmgT120I GGNCC 2 cut(s) 342, 484
BmiI GGNNCC 1 cut(s) 344
BmrFI CCNGG 3 cut(s) 231, 253, 346
BmrI ACTGGG 1 cut(s) 37
BmsI GCATC 2 cut(s) 604, 756
BmuI ACTGGG 1 cut(s) 37
BpiI GAAGAC 1 cut(s) 480
Bpu14I TTCGAA 1 cut(s) 934
BpuEI CTTGAG 1 cut(s) 866
BpuMI CCSGG 1 cut(s) 346
BsaAI YACGTR 1 cut(s) 377
BsaI GGTCTC 1 cut(s) 824
BsaJI CCNNGG 1 cut(s) 300
Bsc4I CCNNNNNNNGG 2 cut(s) 726, 840
Bse1I ACTGG 3 cut(s) 32, 88, 439
BseBI CCWGG 2 cut(s) 231, 253
BseDI CCNNGG 1 cut(s) 300
BseGI GGATG 3 cut(s) 310, 571, 928
BseLI CCNNNNNNNGG 2 cut(s) 726, 840
BseMII CTCAG 5 cut(s) 348, 641, 795, 872, 923
BseNI ACTGG 3 cut(s) 32, 88, 439
BseRI GAGGAG 1 cut(s) 142
BseXI GCAGC 4 cut(s) 604, 781, 799, 859
BsgI GTGCAG 2 cut(s) 72, 611
Bsh1285I CGRYCG 1 cut(s) 644
BshFI GGCC 3 cut(s) 131, 299, 486
BsiEI CGRYCG 1 cut(s) 644
BsiSI CCGG 1 cut(s) 346
BslI CCNNNNNNNGG 2 cut(s) 726, 840
BsmAI GTCTC 2 cut(s) 458, 824
BsmBI CGTCTC 1 cut(s) 458
BsmI GAATGC 1 cut(s) 901
BsnI GGCC 3 cut(s) 131, 299, 486
Bso31I GGTCTC 1 cut(s) 824
Bsp119I TTCGAA 1 cut(s) 934
Bsp143I GATC 1 cut(s) 697
BspACI CCGC 2 cut(s) 369, 438
BspANI GGCC 3 cut(s) 131, 299, 486
BspCNI CTCAG 5 cut(s) 347, 640, 796, 873, 922
BspLI GGNNCC 1 cut(s) 344
BspQI GCTCTTC 2 cut(s) 777, 963
BspT104I TTCGAA 1 cut(s) 934
BspTNI GGTCTC 1 cut(s) 824
BsrI ACTGG 3 cut(s) 32, 88, 439
BssECI CCNNGG 1 cut(s) 300
BssMI GATC 1 cut(s) 697
BssT1I CCWWGG 1 cut(s) 300
Bst2UI CCWGG 2 cut(s) 231, 253
Bst4CI ACNGT 4 cut(s) 45, 64, 113, 645
Bst6I CTCTTC 5 cut(s) 668, 702, 777, 885, 963
BstBAI YACGTR 1 cut(s) 377
BstBI TTCGAA 1 cut(s) 934
BstC8I GCNNGC 3 cut(s) 383, 774, 858
BstDEI CTNAG 8 cut(s) 70, 334, 561, 627, 804, 881, 909, 941
BstF5I GGATG 3 cut(s) 310, 571, 928
BstKTI GATC 1 cut(s) 700
BstMAI GTCTC 2 cut(s) 458, 824
BstMBI GATC 1 cut(s) 697
BstMCI CGRYCG 1 cut(s) 644
BstMWI GCNNNNNNNGC 1 cut(s) 905
BstNI CCWGG 2 cut(s) 231, 253
BstSCI CCNGG 3 cut(s) 229, 251, 344
BstSNI TACGTA 1 cut(s) 377
BstV1I GCAGC 4 cut(s) 604, 781, 799, 859
BstV2I GAAGAC 1 cut(s) 480
BsuRI GGCC 3 cut(s) 131, 299, 486
BtsCI GGATG 3 cut(s) 310, 571, 928
BtsIMutI CAGTG 3 cut(s) 41, 60, 648
Cac8I GCNNGC 3 cut(s) 383, 774, 858
Cfr13I GGNCC 2 cut(s) 342, 484
Csp6I GTAC 2 cut(s) 81, 646
CviAII CATG 2 cut(s) 314, 418
CviQI GTAC 2 cut(s) 81, 646
DdeI CTNAG 8 cut(s) 70, 334, 561, 627, 804, 881, 909, 941
DpnI GATC 1 cut(s) 699
DpnII GATC 1 cut(s) 697
DraI TTTAAA 1 cut(s) 507
EaeI YGGCCR 1 cut(s) 297
Eam1104I CTCTTC 5 cut(s) 668, 702, 777, 885, 963
EarI CTCTTC 5 cut(s) 668, 702, 777, 885, 963
EciI GGCGGA 1 cut(s) 453
Eco105I TACGTA 1 cut(s) 377
Eco130I CCWWGG 1 cut(s) 300
Eco147I AGGCCT 1 cut(s) 131
Eco31I GGTCTC 1 cut(s) 824
Eco47I GGWCC 1 cut(s) 342
Eco57I CTGAAG 1 cut(s) 687
EcoO109I RGGNCCY 1 cut(s) 342
EcoRII CCWGG 2 cut(s) 229, 251
EcoT14I CCWWGG 1 cut(s) 300
EcoT22I ATGCAT 1 cut(s) 290
ErhI CCWWGG 1 cut(s) 300
Esp3I CGTCTC 1 cut(s) 458
FaeI CATG 2 cut(s) 317, 421
FaiI YATR 7 cut(s) 221, 315, 419, 623, 778, 780, 956
FalI AAGNNNNNCTT 2 cut(s) 774, 806
FatI CATG 2 cut(s) 313, 417
FauNDI CATATG 1 cut(s) 778
FbaI TGATCA 1 cut(s) 697
Fnu4HI GCNGC 5 cut(s) 369, 593, 770, 788, 873
FokI GGATG 3 cut(s) 317, 578, 935
Fsp4HI GCNGC 5 cut(s) 369, 593, 770, 788, 873
FspBI CTAG 1 cut(s) 48
GluI GCNGC 5 cut(s) 369, 593, 770, 788, 873
HaeIII GGCC 3 cut(s) 131, 299, 486
HapII CCGG 1 cut(s) 346
Hin1II CATG 2 cut(s) 317, 421
HindIII AAGCTT 1 cut(s) 938
HinfI GANTC 3 cut(s) 309, 760, 815
HpaII CCGG 1 cut(s) 346
HphI GGTGA 1 cut(s) 998
Hpy166II GTNNAC 3 cut(s) 613, 638, 648
Hpy188I TCNGA 6 cut(s) 259, 630, 751, 765, 912, 922
Hpy188III TCNNGA 1 cut(s) 497
Hpy8I GTNNAC 3 cut(s) 613, 638, 648
HpyAV CCTTC 4 cut(s) 48, 142, 718, 983
HpyCH4III ACNGT 4 cut(s) 45, 64, 113, 645
HpyCH4IV ACGT 3 cut(s) 79, 376, 467
HpyCH4V TGCA 7 cut(s) 53, 101, 288, 385, 592, 769, 776
HpyF10VI GCNNNNNNNGC 1 cut(s) 905
HpyF3I CTNAG 8 cut(s) 70, 334, 561, 627, 804, 881, 909, 941
HpySE526I ACGT 3 cut(s) 79, 376, 467
Hsp92II CATG 2 cut(s) 317, 421
Ksp22I TGATCA 1 cut(s) 697
Kzo9I GATC 1 cut(s) 697
LguI GCTCTTC 2 cut(s) 777, 963
LmnI GCTCC 2 cut(s) 31, 155
Lsp1109I GCAGC 4 cut(s) 604, 781, 799, 859
LweI GCATC 2 cut(s) 604, 756
MaeI CTAG 1 cut(s) 48
MaeII ACGT 3 cut(s) 79, 376, 467
MaeIII GTNAC 2 cut(s) 160, 325
MalI GATC 1 cut(s) 699
MboI GATC 1 cut(s) 697
MlsI TGGCCA 1 cut(s) 299
MluCI AATT 6 cut(s) 176, 276, 405, 715, 798, 930
MluNI TGGCCA 1 cut(s) 299
MlyI GAGTC 1 cut(s) 824
MmeI TCCRAC 3 cut(s) 55, 450, 900
MnlI CCTC 7 cut(s) 163, 570, 671, 703, 909, 958, 977
Mox20I TGGCCA 1 cut(s) 299
Mph1103I ATGCAT 1 cut(s) 290
MroXI GAANNNNTTC 1 cut(s) 972
MscI TGGCCA 1 cut(s) 299
MseI TTAA 5 cut(s) 506, 687, 714, 824, 1009
MslI CAYNNNNRTG 1 cut(s) 422
Msp20I TGGCCA 1 cut(s) 299
MspA1I CMGCKG 1 cut(s) 856
MspI CCGG 1 cut(s) 346
MspR9I CCNGG 3 cut(s) 231, 253, 346
Mva1269I GAATGC 1 cut(s) 901
MvaI CCWGG 2 cut(s) 231, 253
MwoI GCNNNNNNNGC 1 cut(s) 905
NciI CCSGG 1 cut(s) 346
NdeI CATATG 1 cut(s) 778
NdeII GATC 1 cut(s) 697
NlaIII CATG 2 cut(s) 317, 421
NlaIV GGNNCC 1 cut(s) 344
NsiI ATGCAT 1 cut(s) 290
NspV TTCGAA 1 cut(s) 934
PceI AGGCCT 1 cut(s) 131
PciSI GCTCTTC 2 cut(s) 777, 963
PctI GAATGC 1 cut(s) 901
PdmI GAANNNNTTC 1 cut(s) 972
PfeI GAWTC 2 cut(s) 309, 760
PkrI GCNGC 5 cut(s) 370, 594, 771, 789, 874
PleI GAGTC 1 cut(s) 823
PpsI GAGTC 1 cut(s) 823
Ppu21I YACGTR 1 cut(s) 377
PpuMI RGGWCCY 1 cut(s) 342
Psp5II RGGWCCY 1 cut(s) 342
Psp6I CCWGG 2 cut(s) 229, 251
PspGI CCWGG 2 cut(s) 229, 251
PspN4I GGNNCC 1 cut(s) 344
PspPI GGNCC 2 cut(s) 342, 484
PspPPI RGGWCCY 1 cut(s) 342
PvuII CAGCTG 1 cut(s) 856
RsaI GTAC 2 cut(s) 82, 647
RsaNI GTAC 2 cut(s) 81, 646
RseI CAYNNNNRTG 1 cut(s) 422
SapI GCTCTTC 2 cut(s) 777, 963
SaqAI TTAA 5 cut(s) 506, 687, 714, 824, 1009
SatI GCNGC 5 cut(s) 369, 593, 770, 788, 873
Sau3AI GATC 1 cut(s) 697
Sau96I GGNCC 2 cut(s) 342, 484
SchI GAGTC 1 cut(s) 824
ScrFI CCNGG 3 cut(s) 231, 253, 346
SfaNI GCATC 2 cut(s) 604, 756
SfuI TTCGAA 1 cut(s) 934
SinI GGWCC 1 cut(s) 342
SmiMI CAYNNNNRTG 1 cut(s) 422
SmlI CTYRAG 1 cut(s) 845
SmoI CTYRAG 1 cut(s) 845
SnaBI TACGTA 1 cut(s) 377
Sse9I AATT 6 cut(s) 176, 276, 405, 715, 798, 930
SseBI AGGCCT 1 cut(s) 131
SsiI CCGC 2 cut(s) 369, 438
SspMI CTAG 1 cut(s) 48
StuI AGGCCT 1 cut(s) 131
StyD4I CCNGG 3 cut(s) 229, 251, 344
StyI CCWWGG 1 cut(s) 300
TaaI ACNGT 4 cut(s) 45, 64, 113, 645
TaiI ACGT 3 cut(s) 82, 379, 470
TaqI TCGA 3 cut(s) 14, 877, 934
TasI AATT 6 cut(s) 176, 276, 405, 715, 798, 930
TauI GCSGC 1 cut(s) 371
TfiI GAWTC 2 cut(s) 309, 760
Tru1I TTAA 5 cut(s) 506, 687, 714, 824, 1009
Tru9I TTAA 5 cut(s) 506, 687, 714, 824, 1009
TscAI CASTG 3 cut(s) 48, 67, 655
TseI GCWGC 4 cut(s) 592, 769, 787, 872
TspDTI ATGAA 4 cut(s) 582, 795, 879, 942
TspGWI ACGGA 1 cut(s) 683
TspRI CASTG 3 cut(s) 48, 67, 655
VpaK11BI GGWCC 1 cut(s) 342
XapI RAATTY 1 cut(s) 930
XmnI GAANNNNTTC 1 cut(s) 972
XspI CTAG 1 cut(s) 48
Zsp2I ATGCAT 1 cut(s) 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.