Rorug07G0203900
ERF Family

P-loop nucleoside triphosphate hydrolase superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000615
Physical Location & Seq
Reverse (-)
17859870 .. 17866723
6854 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0203900.1

Sequence Viewer

Length: 2685 bp
ATGGCGGTGTACTATAAATTTAAGAGTGCAAGAGATTATGATTCTATTGCTATGGACGGTCCTTTCATCTCAGTTGGTATACTCAAAGAAAAAATATTTGAATCCAAGCATTTAGGGAGGGGTACTGATTTCGACCTTGTGGTCACCAATGCCCAGACCAATGAAGAGTATCTTGATGAAGCAACGTTGATTCCAAAAAATACCTCCGTTTTAATTCGCCGTGTACCTGGACGCCCTCGCATGCCCATTGTTACTGATTCAGAGCATAAAGTAGAAGATATGGTGGAGAACATTGAACCCGAAAGGACTAGCTTTCTGGGAGCTGGTTCCTCTGTGAATCCTGAGCCAGACTGGGATGATCTTGGGGGTGATTTGTACGAAATTCCTGAAGTTTTGCCAGTGCAGCCAAGTTATGCGGTTCCGGATATTCCACCATCAAACAAAGCTGATGAAGATAGCAAGCTTAAGGCTTTAATCGACACTCCAGTATTAGACTGGCAACATCAAGGCGCTGACGGCTATGGTCCTGGTAGAGGTTTTGGCCGTGGTATGAATGGGAGAATGGGTGGACGTGGTTTTGGTCGAACAGGAGTGTTTGAGAAAAAAACACCTCCACAGGGCTATATATGTCACAGGTGTAAGGTTCCTGGTCATTATATTCAGCACTGCCCTACAAATGGTGATCCAAACTATGACATCAAAAGAGTGAAGCCACCCACTGGCATTCCCAAGTCCATGTTGATAGCAACCCCAGATGGCTCATATGCACTGCCGAGTGGTGCAGTAGCTGTATTGAGGCCGAATGAGGCTGCTTTTGAGAAAGAGATCGAAGGTTTACCGTCTACACGTTCTGTTGGTGATTTACCACCTGAGCTACACTGCCCCTTGTGCAAGGAAGTGATGAAAGATGCTGTTTTAACGAGCAAATGTTGCTTTAAGAGCTTTTGTGATAAGTGTATCAGGAATTACATTACCTCAAAGTCAGTGTGTGTCTGTGGGGCTACAAATACACTTGCAGATGATCTACTGCCAAATAAGACTCTCAGGGATACCATCAATCGAATCTTGGAGTCTGGTAACAGTAGTACTGATAACGCTGGGAGTGCTTTCCAAGTTCAAGATATGGAGTCTGCACGCTGCCCACAACCCAAGATTCCTTCGCCTACTTTATCTGCTGCATCAAAGGGAGAAAATAAGCCTTTACCTTTGCATGAAGAAGCTCTGAAGACACGGGAGACCGTAGATGAGGTAAAACCTGTTCTTGCCCCACAGCAGATGTTAGAGAATGTGAGGAATACAAAATTAGCCGATGCATCTGAAGCTACCCATGAGTCAATGAGTGTAAAGGAACCTGCATCCCAAGGGAGTGCTCCCCTGGTTGATGAAGAAGTGCAGCAGAGGCTGGCCTCTGTGGAGGCAGGAAAGAAAAGGAAAAAGAAGAAAGTTCGCATGCCTGCAAACGAAATGCAATGGAAGACACCTCAAGACCTTGCAGCTGAAAACTACATGATGCATATGGGGCCCTCTGCTTATAATCCATACTGGAATGGCATGCAACCTGGCATGGGCATGGATGGATATATGCCACCATATGGTGCTCCTATGCCGTATATGGGGTATGGACTAGGTCCTATGGACATGCCATTTGGGGGTCCTTTCCCACCGGACTCATTTGGTGGTCAAGGTTATATGATGCCTATGGTTCCACCTCAGAGGGATCTCGCGGACTTTGGTATGGGTATGGGAATGAATGGAATGAATGGAATGAATGTCGGACCTCCTCCTATCATGAGCAGAGAGGAATTTGAGGCTCGGAAAGCTGATTTGAGGAGGAAGCGTGAAAATGAGAGACGGGGCCAAAGGGAGTTCTCCAAAGATCGGGAATATGGAAGGGATGCGAGTGGTGATGGCGATGTGCCTCCAATGAAGTCCAAATCAAAGTCGTCTCTAGCCCGATCTCCAAGCCCAGACTACAGGGATCGCGATCACCATCGCCAGCACCGATACGAGAGGTCCTCTCCAGAACCCAGAGACCGAGACCGAGACCGAAGACCCTCACGTGACCTCGTCGAGCCTCTCCCGCCACCGCGCCCTCCTAAGAGAAAATCCGAGCACCACCACGACCGCGACCGCGACCGAGAGCCCCAGCGCGAAAGCGCCAAGGACTACGACTACTACGACGATGAGAAGCCCCGCCAGAAACGTCACCGTTCCGAGTCTTCCTCTTCGAAACCTGCCGCCACCGAAACTGCACCACCCTCCAAGCCCAGCTCTGCAAAGCTCGCTGCTGAAACTGCGTCAGCCAAAAGCAAGGCCAGCGTGTTCTCGAGGATTAGCTTCCCTGAAGGGGAAGCGAACAAGAAGAGGAAGAGCTCTCCTGCGGAGAAGGAGGCGGCGGGTGGTTCGAAAGAGCTGGCGAATGGCTTCCACGACCATGAGTATGGCAAGTCCACTAAGGTTGCTACTGCTGCTGCGGCTGTGAGTAGTAGCAGGAAGACTACCAGTGCTGTGAGTTCTCCTGCTGTGGACTATGAGTCCAGCGACGACGATAGACACTTTAAGAGGAAGAAGAAGTCGTCAAGGTACGCAGAGGCTTCGCCGCCGGCGGTGCAGCAAGAGGAGGAGCCGTCGAGGCACTCTAGAGGTTCCAGGGATCGAGAGCGGGAGCATAGGCGGCAAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AIG1

Protein Analysis

894

Amino Acids

99.22

Weight (kDa)

8.52

Isoelectric Point (pI)

55.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DWNN PF08783 3 - 76 3.4e-31 DWNN domain
zf-CCHC_2 PF13696 205 - 225 5.1e-09 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000615)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33970 AT1G33970 AT1G33970 AT1G33970 AT1G33970
fragaria_vesca FvH4_5g32530 FvH4_5g32530
malus_domestica MD15G1403700.v1.1
prunus_persica Prupe.1G549700_v2.0.a1 Prupe.1G549700_v2.0.a1
pyrus_communis pycom15g36100
rosa_chinensis RchiOBHm_Chr7g0226331 RchiOBHm_Chr7g0229101 RchiOBHm_Chr7g0229111 RchiOBHm_Chr7g0229141 RchiOBHm_Chr7g0229161 RchiOBHm_Chr7g0229171 RchiOBHm_Chr7g0229211 RchiOBHm_Chr7g0229241 RchiOBHm_Chr7g0229381 RchiOBHm_Chr7g0229761 RchiOBHm_Chr7g0229911
rosa_laevigata RLG00000000796 RLG00000001464 RLG00000001466 RLG00000001469 RLG00000001523 RLG00000001526 RLG00000001529 RLG00000001530 RLG00000001749 RLG00000001913 RLG00000002114 RLG00000002115 RLG00000023248 RLG00000023250
rosa_multiflora Rmu_co8281135.1_g000001 Rmu_sc0000271.1_g000002 Rmu_sc0000271.1_g000007 Rmu_sc0000271.1_g000014 Rmu_sc0000693.1_g000012 Rmu_sc0000693.1_g000015 Rmu_sc0000693.1_g000023 Rmu_sc0001044.1_g000005 Rmu_sc0006689.1_g000007 Rmu_sc0012733.1_g000005
rosa_roxburghii Rroxscaffold_3G00230540 Rroxscaffold_3G00230590 Rroxscaffold_3G00230600 Rroxscaffold_3G00230700 Rroxscaffold_3G00230710 Rroxscaffold_3G00232980 Rroxscaffold_3G00237610
rosa_rugosa Rorug07G0203800 Rorug07G0203900 Rorug07G0256100 Rorug07G0256400 Rorug07G0256400 Rorug07G0256400 Rorug07G0256500 Rorug07G0256600 Rorug07G0256600 Rorug07G0257100 Rorug07G0257200 Rorug07G0257300 Rorug07G0257400
rosa_samantha Rh7DG401100 Rh7DG401300 Rh7DG401900 Rh7DG402100 Rh7DG402300 Rh7DG402700
rosa_wichuraiana Rw0G001910 Rw0G001930 Rw0G001940 Rw7G033790 Rw7G033810 Rw7G033840 Rw7G033900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1533
AasI GACNNNNNNGTC 1 cut(s) 140
Acc36I ACCTGC 2 cut(s) 1360, 2242
AccB7I CCANNNNNTGG 2 cut(s) 719, 1592
AccBSI CCGCTC 1 cut(s) 2662
AccI GTMKAC 2 cut(s) 79, 842
AccII CGCG 6 cut(s) 1724, 1983, 2089, 2127, 2133, 2151
AccIII TCCGGA 1 cut(s) 421
AclI AACGTT 1 cut(s) 185
AclWI GGATC 4 cut(s) 677, 1725, 1986, 2661
AcoI YGGCCR 1 cut(s) 541
AcsI RAATTY 3 cut(s) 17, 381, 1802
AcuI CTGAAG 4 cut(s) 408, 1244, 1338, 2364
AcvI CACGTG 1 cut(s) 2060
AcyI GRCGYC 1 cut(s) 232
AfaI GTAC 6 cut(s) 11, 124, 225, 377, 1087, 2585
AflII CTTAAG 1 cut(s) 464
AflIII ACRYGT 1 cut(s) 845
AgsI TTSAA 3 cut(s) 101, 296, 1118
AhdI GACNNNNNGTC 1 cut(s) 2533
AjiI CACGTC 1 cut(s) 572
AjnI CCWGG 6 cut(s) 226, 526, 646, 1374, 1558, 2648
Alw21I GWGCWC 4 cut(s) 1372, 1600, 2115, 2375
Alw26I GTCTC 6 cut(s) 1229, 1843, 1950, 2025, 2031, 2037
AlwI GGATC 4 cut(s) 677, 1725, 1986, 2661
AlwNI CAGNNNCTG 2 cut(s) 788, 1402
Ama87I CYCGRG 1 cut(s) 2326
Aor13HI TCCGGA 1 cut(s) 421
AoxI GGCC 6 cut(s) 541, 797, 1404, 1520, 1855, 2313
ApaI GGGCCC 1 cut(s) 1524
ApoI RAATTY 3 cut(s) 17, 381, 1802
ArsI GACNNNNNNTTYG 2 cut(s) 1628, 1660
Asp700I GAANNNNTTC 1 cut(s) 2423
AspLEI GCGC 4 cut(s) 512, 2091, 2151, 2159
AspS9I GGNCC 9 cut(s) 59, 524, 1520, 1521, 1628, 1652, 1775, 1855, 2013
AsuHPI GGTGA 7 cut(s) 136, 380, 692, 869, 1916, 1979, 2198
AsuII TTCGAA 2 cut(s) 2228, 2405
AvaI CYCGRG 1 cut(s) 2326
AvaII GGWCC 6 cut(s) 59, 524, 1628, 1652, 1775, 2013
BaeGI GKGCMC 1 cut(s) 1524
BanII GRGCYC 3 cut(s) 1524, 2145, 2375
BbrPI CACGTG 1 cut(s) 2060
BbsI GAAGAC 5 cut(s) 1232, 1481, 2056, 2211, 2501
Bbv12I GWGCWC 4 cut(s) 1372, 1600, 2115, 2375
BccI CCATC 6 cut(s) 442, 749, 1061, 1568, 1901, 1998
BceAI ACGGC 5 cut(s) 204, 528, 532, 1591, 2611
BcgI CGANNNNNNTGC 2 cut(s) 2577, 2611
BciT130I CCWGG 6 cut(s) 228, 528, 648, 1376, 1560, 2650
BciVI GTATCC 1 cut(s) 1042
BcoDI GTCTC 6 cut(s) 1229, 1843, 1950, 2025, 2031, 2037
BfaI CTAG 4 cut(s) 309, 1625, 1949, 2640
BfmI CTRYAG 1 cut(s) 1972
BfoI RGCGCY 2 cut(s) 513, 2160
BfrI CTTAAG 1 cut(s) 464
BfuAI ACCTGC 2 cut(s) 1360, 2242
BfuI GTATCC 1 cut(s) 1042
BglI GCCNNNNNGGC 1 cut(s) 2632
BmcAI AGTACT 1 cut(s) 1087
Bme1390I CCNGG 6 cut(s) 228, 528, 648, 1376, 1560, 2650
Bme18I GGWCC 6 cut(s) 59, 524, 1628, 1652, 1775, 2013
BmeRI GACNNNNNGTC 1 cut(s) 2533
BmeT110I CYCGRG 1 cut(s) 2326
BmgBI CACGTC 1 cut(s) 572
BmgT120I GGNCC 9 cut(s) 59, 524, 1520, 1521, 1628, 1652, 1775, 1855, 2013
BmrFI CCNGG 6 cut(s) 228, 528, 648, 1376, 1560, 2650
BmrI ACTGGG 1 cut(s) 361
BmsI GCATC 8 cut(s) 898, 1187, 1300, 1322, 1364, 1500, 1683, 1885
BmuI ACTGGG 1 cut(s) 361
BpiI GAAGAC 5 cut(s) 1232, 1481, 2056, 2211, 2501
BplI GAGNNNNNCTC 6 cut(s) 2000, 2032, 2002, 2034, 2207, 2239
BpmI CTGGAG 2 cut(s) 468, 2004
Bpu10I CCTNAGC 2 cut(s) 342, 870
Bpu14I TTCGAA 2 cut(s) 2228, 2405
BpuEI CTTGAG 1 cut(s) 1467
BsaAI YACGTR 1 cut(s) 2060
BsaBI GATNNNNATC 2 cut(s) 1983, 1989
BsaHI GRCGYC 1 cut(s) 232
BsaI GGTCTC 4 cut(s) 1229, 2025, 2031, 2037
BsaJI CCNNGG 5 cut(s) 544, 1360, 1374, 2160, 2649
BsaWI WCCGGW 2 cut(s) 421, 1663
BsaXI ACNNNNNCTCC 6 cut(s) 550, 580, 1822, 1852, 2612, 2642
Bse118I RCCGGY 1 cut(s) 2602
Bse1I ACTGG 7 cut(s) 356, 398, 485, 500, 724, 1547, 2502
Bse3DI GCAATG 1 cut(s) 1475
Bse8I GATNNNNATC 2 cut(s) 1983, 1989
BseAI TCCGGA 1 cut(s) 421
BseBI CCWGG 6 cut(s) 228, 528, 648, 1376, 1560, 2650
BseDI CCNNGG 5 cut(s) 544, 1360, 1374, 2160, 2649
BseGI GGATG 4 cut(s) 361, 1355, 1579, 1900
BseJI GATNNNNATC 2 cut(s) 1983, 1989
BseMI GCAATG 1 cut(s) 1475
BseMII CTCAG 5 cut(s) 84, 333, 861, 1057, 1724
BseNI ACTGG 7 cut(s) 356, 398, 485, 500, 724, 1547, 2502
BseRI GAGGAG 4 cut(s) 1770, 1843, 2633, 2636
BseSI GKGCMC 1 cut(s) 1524
BseYI CCCAGC 3 cut(s) 1097, 2145, 2267
BsgI GTGCAG 6 cut(s) 422, 801, 1116, 1412, 2235, 2630
Bsh1236I CGCG 6 cut(s) 1724, 1983, 2089, 2127, 2133, 2151
Bsh1285I CGRYCG 3 cut(s) 2125, 2131, 2137
BshFI GGCC 6 cut(s) 543, 799, 1406, 1522, 1857, 2315
BsiEI CGRYCG 3 cut(s) 2125, 2131, 2137
BsiHKAI GWGCWC 4 cut(s) 1372, 1600, 2115, 2375
BsiHKCI CYCGRG 1 cut(s) 2326
BsiSI CCGG 3 cut(s) 422, 1664, 2603
BsmAI GTCTC 6 cut(s) 1229, 1843, 1950, 2025, 2031, 2037
BsmBI CGTCTC 2 cut(s) 1843, 1950
BsmI GAATGC 1 cut(s) 723
BsnI GGCC 6 cut(s) 543, 799, 1406, 1522, 1857, 2315
Bso31I GGTCTC 4 cut(s) 1229, 2025, 2031, 2037
BsoBI CYCGRG 1 cut(s) 2326
Bsp119I TTCGAA 2 cut(s) 2228, 2405
Bsp120I GGGCCC 1 cut(s) 1520
Bsp1286I GDGCHC 6 cut(s) 1372, 1524, 1600, 2115, 2145, 2375
Bsp13I TCCGGA 1 cut(s) 421
Bsp68I TCGCGA 1 cut(s) 1983
BspANI GGCC 6 cut(s) 543, 799, 1406, 1522, 1857, 2315
BspCNI CTCAG 5 cut(s) 83, 334, 862, 1056, 1723
BspEI TCCGGA 1 cut(s) 421
BspFNI CGCG 6 cut(s) 1724, 1983, 2089, 2127, 2133, 2151
BspHI TCATGA 1 cut(s) 1788
BspMI ACCTGC 2 cut(s) 1360, 2242
BspPI GGATC 4 cut(s) 677, 1725, 1986, 2661
BspQI GCTCTTC 1 cut(s) 2363
BspT104I TTCGAA 2 cut(s) 2228, 2405
BspTI CTTAAG 1 cut(s) 464
BspTNI GGTCTC 4 cut(s) 1229, 2025, 2031, 2037
BsrBI CCGCTC 1 cut(s) 2662
BsrDI GCAATG 1 cut(s) 1475
BsrFI RCCGGY 1 cut(s) 2602
BsrI ACTGG 7 cut(s) 356, 398, 485, 500, 724, 1547, 2502
BssAI RCCGGY 1 cut(s) 2602
BssECI CCNNGG 5 cut(s) 544, 1360, 1374, 2160, 2649
BssNAI GTATAC 1 cut(s) 80
BssNI GRCGYC 1 cut(s) 232
BssT1I CCWWGG 2 cut(s) 1360, 2160
Bst1107I GTATAC 1 cut(s) 80
Bst2UI CCWGG 6 cut(s) 228, 528, 648, 1376, 1560, 2650
Bst4CI ACNGT 5 cut(s) 59, 840, 1082, 1240, 2210
Bst6I CTCTTC 4 cut(s) 159, 2230, 2357, 2363
BstACI GRCGYC 1 cut(s) 232
BstAFI CTTAAG 1 cut(s) 464
BstAPI GCANNNNNTGC 1 cut(s) 930
BstBAI YACGTR 1 cut(s) 2060
BstBI TTCGAA 2 cut(s) 2228, 2405
BstDEI CTNAG 7 cut(s) 70, 342, 870, 1043, 1710, 2097, 2454
BstDSI CCRYGG 1 cut(s) 544
BstEII GGTNACC 1 cut(s) 142
BstENI CCTNNNNNAGG 1 cut(s) 531
BstF5I GGATG 4 cut(s) 361, 1355, 1579, 1900
BstFNI CGCG 6 cut(s) 1724, 1983, 2089, 2127, 2133, 2151
BstH2I RGCGCY 2 cut(s) 513, 2160
BstHHI GCGC 4 cut(s) 512, 2091, 2151, 2159
BstMAI GTCTC 6 cut(s) 1229, 1843, 1950, 2025, 2031, 2037
BstMCI CGRYCG 3 cut(s) 2125, 2131, 2137
BstNI CCWGG 6 cut(s) 228, 528, 648, 1376, 1560, 2650
BstNSI RCATGY 4 cut(s) 244, 1453, 1555, 1642
BstPI GGTNACC 1 cut(s) 142
BstSCI CCNGG 6 cut(s) 226, 526, 646, 1374, 1558, 2648
BstSFI CTRYAG 1 cut(s) 1972
BstSLI GKGCMC 1 cut(s) 1524
BstUI CGCG 6 cut(s) 1724, 1983, 2089, 2127, 2133, 2151
BstV2I GAAGAC 5 cut(s) 1232, 1481, 2056, 2211, 2501
BstX2I RGATCY 1 cut(s) 1717
BstXI CCANNNNNNTGG 1 cut(s) 2441
BstYI RGATCY 1 cut(s) 1717
BstZ17I GTATAC 1 cut(s) 80
BsuI GTATCC 1 cut(s) 1042
BsuRI GGCC 6 cut(s) 543, 799, 1406, 1522, 1857, 2315
BtgI CCRYGG 1 cut(s) 544
BtgZI GCGATG 2 cut(s) 1926, 1976
BtrI CACGTC 1 cut(s) 572
BtsCI GGATG 4 cut(s) 361, 1355, 1579, 1900
BtsI GCAGTG 3 cut(s) 664, 767, 877
BtsIMutI CAGTG 7 cut(s) 405, 664, 717, 767, 877, 990, 2509
BtuMI TCGCGA 1 cut(s) 1983
BveI ACCTGC 2 cut(s) 1360, 2242
CaiI CAGNNNCTG 2 cut(s) 788, 1402
CciI TCATGA 1 cut(s) 1788
CfoI GCGC 4 cut(s) 512, 2091, 2151, 2159
Cfr10I RCCGGY 1 cut(s) 2602
Cfr13I GGNCC 9 cut(s) 59, 524, 1520, 1521, 1628, 1652, 1775, 1855, 2013
CseI GACGC 2 cut(s) 240, 2286
Csp6I GTAC 6 cut(s) 10, 123, 224, 376, 1086, 2584
CspCI CAANNNNNGTGG 2 cut(s) 2440, 2475
CviQI GTAC 6 cut(s) 10, 123, 224, 376, 1086, 2584
DdeI CTNAG 7 cut(s) 70, 342, 870, 1043, 1710, 2097, 2454
DrdI GACNNNNNNGTC 1 cut(s) 140
DriI GACNNNNNGTC 1 cut(s) 2533
DseDI GACNNNNNNGTC 1 cut(s) 140
EaeI YGGCCR 1 cut(s) 541
Eam1104I CTCTTC 4 cut(s) 159, 2230, 2357, 2363
Eam1105I GACNNNNNGTC 1 cut(s) 2533
EarI CTCTTC 4 cut(s) 159, 2230, 2357, 2363
Ecl136II GAGCTC 1 cut(s) 2373
Eco130I CCWWGG 2 cut(s) 1360, 2160
Eco24I GRGCYC 3 cut(s) 1524, 2145, 2375
Eco31I GGTCTC 4 cut(s) 1229, 2025, 2031, 2037
Eco47I GGWCC 6 cut(s) 59, 524, 1628, 1652, 1775, 2013
Eco53kI GAGCTC 1 cut(s) 2373
Eco57I CTGAAG 4 cut(s) 408, 1244, 1338, 2364
Eco72I CACGTG 1 cut(s) 2060
Eco88I CYCGRG 1 cut(s) 2326
Eco91I GGTNACC 1 cut(s) 142
EcoICRI GAGCTC 1 cut(s) 2373
EcoNI CCTNNNNNAGG 1 cut(s) 531
EcoO109I RGGNCCY 5 cut(s) 1520, 1521, 1628, 1652, 2013
EcoO65I GGTNACC 1 cut(s) 142
EcoRII CCWGG 6 cut(s) 226, 526, 646, 1374, 1558, 2648
EcoT14I CCWWGG 2 cut(s) 1360, 2160
EcoT22I ATGCAT 2 cut(s) 1315, 1515
EcoT38I GRGCYC 3 cut(s) 1524, 2145, 2375
ErhI CCWWGG 2 cut(s) 1360, 2160
Esp3I CGTCTC 2 cut(s) 1843, 1950
FalI AAGNNNNNCTT 2 cut(s) 156, 188
FauI CCCGC 4 cut(s) 2088, 2201, 2389, 2655
FauNDI CATATG 3 cut(s) 763, 1515, 1591
FblI GTMKAC 2 cut(s) 79, 842
FokI GGATG 4 cut(s) 368, 1342, 1586, 1907
FriOI GRGCYC 3 cut(s) 1524, 2145, 2375
FspBI CTAG 4 cut(s) 309, 1625, 1949, 2640
GlaI GCGC 4 cut(s) 511, 2090, 2150, 2158
GsaI CCCAGC 3 cut(s) 1101, 2149, 2271
GsuI CTGGAG 2 cut(s) 468, 2004
HaeII RGCGCY 2 cut(s) 513, 2160
HaeIII GGCC 6 cut(s) 543, 799, 1406, 1522, 1857, 2315
HapII CCGG 3 cut(s) 422, 1664, 2603
HgaI GACGC 2 cut(s) 240, 2286
HhaI GCGC 4 cut(s) 512, 2091, 2151, 2159
Hin1I GRCGYC 1 cut(s) 232
Hin6I GCGC 4 cut(s) 510, 2089, 2149, 2157
HinP1I GCGC 4 cut(s) 510, 2089, 2149, 2157
HindIII AAGCTT 1 cut(s) 461
HpaII CCGG 3 cut(s) 422, 1664, 2603
HphI GGTGA 7 cut(s) 136, 380, 692, 869, 1916, 1979, 2198
Hpy166II GTNNAC 8 cut(s) 10, 80, 224, 569, 836, 843, 2451, 2527
Hpy188I TCNGA 8 cut(s) 262, 1224, 1318, 1713, 1775, 1815, 2110, 2215
Hpy8I GTNNAC 8 cut(s) 10, 80, 224, 569, 836, 843, 2451, 2527
Hpy99I CGWCG 5 cut(s) 2072, 2183, 2546, 2549, 2632
HpyAV CCTTC 5 cut(s) 824, 1167, 1884, 2339, 2380
HpyCH4III ACNGT 5 cut(s) 59, 840, 1082, 1240, 2210
HpyCH4IV ACGT 5 cut(s) 185, 571, 847, 2059, 2203
HpyF3I CTNAG 7 cut(s) 70, 342, 870, 1043, 1710, 2097, 2454
HpySE526I ACGT 5 cut(s) 185, 571, 847, 2059, 2203
Hsp92I GRCGYC 1 cut(s) 232
HspAI GCGC 4 cut(s) 510, 2089, 2149, 2157
Kpn2I TCCGGA 1 cut(s) 421
KroI GCCGGC 1 cut(s) 2602
KroNI GCCGGC 1 cut(s) 2604
LguI GCTCTTC 1 cut(s) 2363
LmnI GCTCC 5 cut(s) 320, 1375, 1603, 2623, 2665
LweI GCATC 8 cut(s) 898, 1187, 1300, 1322, 1364, 1500, 1683, 1885
MaeI CTAG 4 cut(s) 309, 1625, 1949, 2640
MaeII ACGT 5 cut(s) 185, 571, 847, 2059, 2203
MaeIII GTNAC 6 cut(s) 142, 250, 629, 1076, 2060, 2204
MbiI CCGCTC 1 cut(s) 2662
MflI RGATCY 1 cut(s) 1717
MhlI GDGCHC 6 cut(s) 1372, 1524, 1600, 2115, 2145, 2375
MluCI AATT 6 cut(s) 17, 213, 381, 964, 1301, 1802
MlyI GAGTC 7 cut(s) 1033, 1079, 1136, 1340, 1661, 2225, 2543
MmeI TCCRAC 1 cut(s) 1753
Mph1103I ATGCAT 2 cut(s) 1315, 1515
MreI CGCCGGCG 1 cut(s) 2602
MroI TCCGGA 1 cut(s) 421
MroNI GCCGGC 1 cut(s) 2602
MroXI GAANNNNTTC 1 cut(s) 2423
MseI TTAA 7 cut(s) 21, 212, 465, 473, 917, 936, 2559
MslI CAYNNNNRTG 3 cut(s) 1568, 2433, 2439
MspA1I CMGCKG 1 cut(s) 1496
MspCI CTTAAG 1 cut(s) 464
MspI CCGG 3 cut(s) 422, 1664, 2603
MspR9I CCNGG 6 cut(s) 228, 528, 648, 1376, 1560, 2650
Mva1269I GAATGC 1 cut(s) 723
MvaI CCWGG 6 cut(s) 228, 528, 648, 1376, 1560, 2650
MvnI CGCG 6 cut(s) 1724, 1983, 2089, 2127, 2133, 2151
NaeI GCCGGC 1 cut(s) 2604
NdeI CATATG 3 cut(s) 763, 1515, 1591
NgoMIV GCCGGC 1 cut(s) 2602
NmeAIII GCCGAG 1 cut(s) 798
NmuCI GTSAC 4 cut(s) 142, 629, 2060, 2204
NruI TCGCGA 1 cut(s) 1983
NsiI ATGCAT 2 cut(s) 1315, 1515
NspI RCATGY 4 cut(s) 244, 1453, 1555, 1642
NspV TTCGAA 2 cut(s) 2228, 2405
PaeI GCATGC 3 cut(s) 244, 1453, 1555
PaeR7I CTCGAG 1 cut(s) 2326
PagI TCATGA 1 cut(s) 1788
PciSI GCTCTTC 1 cut(s) 2363
PcsI WCGNNNNNNNCGW 2 cut(s) 1999, 2175
PctI GAATGC 1 cut(s) 723
PdiI GCCGGC 1 cut(s) 2604
PdmI GAANNNNTTC 1 cut(s) 2423
PfeI GAWTC 7 cut(s) 41, 101, 190, 257, 337, 1062, 1153
PflFI GACNNNGTC 2 cut(s) 1626, 2066
PflMI CCANNNNNTGG 2 cut(s) 719, 1592
PleI GAGTC 7 cut(s) 1033, 1078, 1135, 1339, 1661, 2224, 2542
PmaCI CACGTG 1 cut(s) 2060
PmlI CACGTG 1 cut(s) 2060
PpsI GAGTC 7 cut(s) 1033, 1078, 1135, 1339, 1661, 2224, 2542
Ppu21I YACGTR 1 cut(s) 2060
PpuMI RGGWCCY 3 cut(s) 1628, 1652, 2013
PsiI TTATAA 1 cut(s) 1533
Psp124BI GAGCTC 1 cut(s) 2375
Psp1406I AACGTT 1 cut(s) 185
Psp5II RGGWCCY 3 cut(s) 1628, 1652, 2013
Psp6I CCWGG 6 cut(s) 226, 526, 646, 1374, 1558, 2648
PspCI CACGTG 1 cut(s) 2060
PspEI GGTNACC 1 cut(s) 142
PspFI CCCAGC 3 cut(s) 1097, 2145, 2267
PspGI CCWGG 6 cut(s) 226, 526, 646, 1374, 1558, 2648
PspOMI GGGCCC 1 cut(s) 1520
PspPI GGNCC 9 cut(s) 59, 524, 1520, 1521, 1628, 1652, 1775, 1855, 2013
PspPPI RGGWCCY 3 cut(s) 1628, 1652, 2013
PsrI GAACNNNNNNTAC 2 cut(s) 1242, 1274
PstNI CAGNNNCTG 2 cut(s) 788, 1402
PsuI RGATCY 1 cut(s) 1717
PsyI GACNNNGTC 2 cut(s) 1626, 2066
PvuII CAGCTG 1 cut(s) 1496
RruI TCGCGA 1 cut(s) 1983
RsaI GTAC 6 cut(s) 11, 124, 225, 377, 1087, 2585
RsaNI GTAC 6 cut(s) 10, 123, 224, 376, 1086, 2584
RseI CAYNNNNRTG 3 cut(s) 1568, 2433, 2439
SacI GAGCTC 1 cut(s) 2375
SapI GCTCTTC 1 cut(s) 2363
SaqAI TTAA 7 cut(s) 21, 212, 465, 473, 917, 936, 2559
Sau96I GGNCC 9 cut(s) 59, 524, 1520, 1521, 1628, 1652, 1775, 1855, 2013
ScaI AGTACT 1 cut(s) 1087
SchI GAGTC 7 cut(s) 1033, 1079, 1136, 1340, 1661, 2225, 2543
ScrFI CCNGG 6 cut(s) 228, 528, 648, 1376, 1560, 2650
SduI GDGCHC 6 cut(s) 1372, 1524, 1600, 2115, 2145, 2375
SfaNI GCATC 8 cut(s) 898, 1187, 1300, 1322, 1364, 1500, 1683, 1885
SfcI CTRYAG 1 cut(s) 1972
Sfr274I CTCGAG 1 cut(s) 2326
SfuI TTCGAA 2 cut(s) 2228, 2405
SgrAI CRCCGGYG 1 cut(s) 2602
SinI GGWCC 6 cut(s) 59, 524, 1628, 1652, 1775, 2013
SlaI CTCGAG 1 cut(s) 2326
SmiMI CAYNNNNRTG 3 cut(s) 1568, 2433, 2439
SmlI CTYRAG 3 cut(s) 464, 1482, 2326
SmoI CTYRAG 3 cut(s) 464, 1482, 2326
SphI GCATGC 3 cut(s) 244, 1453, 1555
Sse9I AATT 6 cut(s) 17, 213, 381, 964, 1301, 1802
SspI AATATT 1 cut(s) 96
SspMI CTAG 4 cut(s) 309, 1625, 1949, 2640
SstI GAGCTC 1 cut(s) 2375
StyD4I CCNGG 6 cut(s) 226, 526, 646, 1374, 1558, 2648
StyI CCWWGG 2 cut(s) 1360, 2160
TaaI ACNGT 5 cut(s) 59, 840, 1082, 1240, 2210
TaiI ACGT 5 cut(s) 188, 574, 850, 2062, 2206
TaqII GACCGA 4 cut(s) 2049, 2055, 2061, 2151
TasI AATT 6 cut(s) 17, 213, 381, 964, 1301, 1802
TatI WGTACW 2 cut(s) 9, 1085
TauI GCSGC 5 cut(s) 2240, 2396, 2477, 2602, 2677
TfiI GAWTC 7 cut(s) 41, 101, 190, 257, 337, 1062, 1153
Tru1I TTAA 7 cut(s) 21, 212, 465, 473, 917, 936, 2559
Tru9I TTAA 7 cut(s) 21, 212, 465, 473, 917, 936, 2559
TscAI CASTG 7 cut(s) 405, 671, 724, 774, 884, 990, 2509
TseFI GTSAC 4 cut(s) 142, 629, 2060, 2204
Tsp45I GTSAC 4 cut(s) 142, 629, 2060, 2204
TspGWI ACGGA 1 cut(s) 196
TspRI CASTG 7 cut(s) 405, 671, 724, 774, 884, 990, 2509
Tth111I GACNNNGTC 2 cut(s) 1626, 2066
Van91I CCANNNNNTGG 2 cut(s) 719, 1592
Vha464I CTTAAG 1 cut(s) 464
VpaK11BI GGWCC 6 cut(s) 59, 524, 1628, 1652, 1775, 2013
XagI CCTNNNNNAGG 1 cut(s) 531
XapI RAATTY 3 cut(s) 17, 381, 1802
XbaI TCTAGA 1 cut(s) 2639
XceI RCATGY 4 cut(s) 244, 1453, 1555, 1642
XcmI CCANNNNNNNNNTGG 1 cut(s) 492
XhoI CTCGAG 1 cut(s) 2326
XmiI GTMKAC 2 cut(s) 79, 842
XmnI GAANNNNTTC 1 cut(s) 2423
XspI CTAG 4 cut(s) 309, 1625, 1949, 2640
ZrmI AGTACT 1 cut(s) 1087
Zsp2I ATGCAT 2 cut(s) 1315, 1515
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.