Rorug07G0257200
ERF Family

P-loop nucleoside triphosphate hydrolase superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000615
Physical Location & Seq
Reverse (-)
24087236 .. 24090060
2825 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0257200.1

Sequence Viewer

Length: 1488 bp
ATGAGTTCGGGAAGAGCAAACGGAAATGGGAGGGGCAAGCAAGTCTTTGAAGCAAACAGTCAGCAGCTGAGCCAAGGTGTAGCGGATCTTTGCCTGGGTTCGGAAGAAGGTAATGGAGGGTGGGAAGAAGTTGGAAAGAAAACAAAGAACAGAACTGGAAGCAGTGCTGCAAAGGGTGCTCAAAAGTCTAACCCAAAGGCATGGGTGCACCAAGATGTCCAAAAGCTCAATGTGTGGAGTGGTACAGGAGGATCACAAGCTGTTAATCCGTGGAAACCAGCTGGAAGAGGAAACTCAAGGCCGCTGTCTAACAGTACCCCTCAGCAAGTGATTACCCCTCCACTGCACAATGGGTGGAATTGGAAGTCAAAGGCCGGGAACAATGACAGATATGTGCCTCCTGCTGCAGCTCATCCTGCTGATGACGATGATGAGTCTGATGCATTGAGTGACCTTGATGATGATGACGACGACATTTTCAGTGATGATTCAGACTCTAGTCAAATGAGTCATGCCACTCAAAAGAATAGCAAGTGGTTCAAGGATTTCTTCGACAAGTTGGAGAAGTTAAGCGTGGAGGAGATAAATGATCCTAACTGGCAGTGGCACTGTCCTGCTTGCAAAGGGGGTCCTGGTGCCATTGACTGGTATCAAGGCATGCAGCCATTGATCAGACATGCGGAAACAAAAGGATCGAAGAGGGTGAAGCTTCACCGGCAGCTTGCACAACTTCTGGAAGCAGAGTTGAAGGTGCGGGGTACAAGCGTTATACCTGCAGGTGTGGTCTTTGGTAAATGGGTAGGATTGAAAGAAGAGGAAAGTAATCACAAAATTATCTGGCCTCCAATGGTATTCATCATGAATACCAGACTTGAAAAAGATGAGAATGACAAATGGCTGGGTATGGGCAATGAGGAGCTTTTACTCTGCTTCAGCTCTTATCCTGCTCAGAAGGGTAAACACTCCTATGGCCCCCAAGGACACTGTGGGATTAGCACTTTGATCTTTGAGCCATCGGCAATGGGTTACTTTGAGGCTGCACGGCTGCATAGGCATTTTGCTGAGGAAGGTTTGGGCAGAGATGCTTGGGATCGTAGCCCTGTGTTGTTTCGTCCAGGTGGTAAACGACAGCTTTATGGTTTCATGCCAATGAAACAAGAGTTGGATATATTCAACCAGCACTCGGAAGAGAAGCTGAAGCTGAAATTTGAGATGAGGTCCTACCAGGAGATGGTCCTCCACCCCCTGAGGAAGATGAATGAGGACAGCCAACTGGTTTCCTATATGAAGACCAGGGTTGCGAAAGAAGAGAGACACAGCCAAGCTCTAGAAGAAACTCTTCGTATAGTAAATGACAAGATGCAGAAGATACAGGAGGAAAACCACCTTTTGAAAGAGAGGACCAAAATGCACTATGAACAAAACAAAGAAGAGATGGATCTCCAGGAGGAATTTTACAAAGATATGCTATCTCATACCCAAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AIG1

Protein Analysis

495

Amino Acids

56.24

Weight (kDa)

6.25

Isoelectric Point (pI)

44.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-XS PF03470 204 - 242 5.1e-09 XS zinc finger domain
XS PF03468 276 - 387 1.3e-25 XS domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000615)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33970 AT1G33970 AT1G33970 AT1G33970 AT1G33970
fragaria_vesca FvH4_5g32530 FvH4_5g32530
malus_domestica MD15G1403700.v1.1
prunus_persica Prupe.1G549700_v2.0.a1 Prupe.1G549700_v2.0.a1
pyrus_communis pycom15g36100
rosa_chinensis RchiOBHm_Chr7g0226331 RchiOBHm_Chr7g0229101 RchiOBHm_Chr7g0229111 RchiOBHm_Chr7g0229141 RchiOBHm_Chr7g0229161 RchiOBHm_Chr7g0229171 RchiOBHm_Chr7g0229211 RchiOBHm_Chr7g0229241 RchiOBHm_Chr7g0229381 RchiOBHm_Chr7g0229761 RchiOBHm_Chr7g0229911
rosa_laevigata RLG00000000796 RLG00000001464 RLG00000001466 RLG00000001469 RLG00000001523 RLG00000001526 RLG00000001529 RLG00000001530 RLG00000001749 RLG00000001913 RLG00000002114 RLG00000002115 RLG00000023248 RLG00000023250
rosa_multiflora Rmu_co8281135.1_g000001 Rmu_sc0000271.1_g000002 Rmu_sc0000271.1_g000007 Rmu_sc0000271.1_g000014 Rmu_sc0000693.1_g000012 Rmu_sc0000693.1_g000015 Rmu_sc0000693.1_g000023 Rmu_sc0001044.1_g000005 Rmu_sc0006689.1_g000007 Rmu_sc0012733.1_g000005
rosa_roxburghii Rroxscaffold_3G00230540 Rroxscaffold_3G00230590 Rroxscaffold_3G00230600 Rroxscaffold_3G00230700 Rroxscaffold_3G00230710 Rroxscaffold_3G00232980 Rroxscaffold_3G00237610
rosa_rugosa Rorug07G0203800 Rorug07G0203900 Rorug07G0256100 Rorug07G0256400 Rorug07G0256400 Rorug07G0256400 Rorug07G0256500 Rorug07G0256600 Rorug07G0256600 Rorug07G0257100 Rorug07G0257200 Rorug07G0257300 Rorug07G0257400
rosa_samantha Rh7DG401100 Rh7DG401300 Rh7DG401900 Rh7DG402100 Rh7DG402300 Rh7DG402700
rosa_wichuraiana Rw0G001910 Rw0G001930 Rw0G001940 Rw7G033790 Rw7G033810 Rw7G033840 Rw7G033900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 767
Acc36I ACCTGC 2 cut(s) 767, 781
AccB1I GGYRCC 1 cut(s) 635
AccB7I CCANNNNNTGG 2 cut(s) 645, 1231
AciI CCGC 4 cut(s) 83, 302, 680, 754
AclWI GGATC 6 cut(s) 93, 259, 584, 700, 1098, 1446
AcsI RAATTY 2 cut(s) 1205, 1451
AcuI CTGAAG 2 cut(s) 916, 1217
AfaI GTAC 3 cut(s) 244, 316, 760
AfiI CCNNNNNNNGG 4 cut(s) 100, 645, 1183, 1231
AgsI TTSAA 7 cut(s) 50, 541, 748, 808, 875, 1174, 1393
AjnI CCWGG 6 cut(s) 93, 631, 1114, 1224, 1292, 1443
AjuI GAANNNNNNNTTGG 2 cut(s) 1145, 1177
Alw21I GWGCWC 2 cut(s) 181, 210
Alw26I GTCTC 1 cut(s) 1306
Alw44I GTGCAC 1 cut(s) 206
AlwI GGATC 6 cut(s) 93, 259, 584, 700, 1098, 1446
AlwNI CAGNNNCTG 1 cut(s) 67
AoxI GGCC 4 cut(s) 299, 372, 839, 970
ApaLI GTGCAC 1 cut(s) 206
ApeKI GCWGC 8 cut(s) 64, 167, 404, 407, 661, 718, 1037, 1045
ApoI RAATTY 2 cut(s) 1205, 1451
Asp700I GAANNNNTTC 1 cut(s) 1338
AspS9I GGNCC 5 cut(s) 629, 971, 1218, 1234, 1401
AsuC2I CCSGG 1 cut(s) 376
AsuHPI GGTGA 2 cut(s) 704, 715
AvaII GGWCC 4 cut(s) 629, 1218, 1234, 1401
AxyI CCTNAGG 1 cut(s) 1247
BaeGI GKGCMC 1 cut(s) 210
BaeI ACNNNNGTAYC 2 cut(s) 750, 783
BanI GGYRCC 1 cut(s) 635
BbsI GAAGAC 1 cut(s) 1295
Bbv12I GWGCWC 2 cut(s) 181, 210
BbvCI CCTCAGC 2 cut(s) 321, 1062
BbvI GCAGC 8 cut(s) 76, 154, 391, 419, 673, 730, 1024, 1032
BccI CCATC 3 cut(s) 1021, 1225, 1429
BceAI ACGGC 1 cut(s) 1058
BciT130I CCWGG 6 cut(s) 95, 633, 1116, 1226, 1294, 1445
BclI TGATCA 1 cut(s) 669
BcnI CCSGG 1 cut(s) 376
BcoDI GTCTC 1 cut(s) 1306
BfaI CTAG 2 cut(s) 498, 1328
BfmI CTRYAG 2 cut(s) 405, 774
BfuAI ACCTGC 2 cut(s) 767, 781
BisI GCNGC 9 cut(s) 65, 168, 302, 405, 408, 662, 719, 1038, 1046
BlpI GCTNAGC 1 cut(s) 68
BlsI GCNGC 9 cut(s) 66, 169, 303, 406, 409, 663, 720, 1039, 1047
Bme1390I CCNGG 7 cut(s) 95, 376, 633, 1116, 1226, 1294, 1445
Bme18I GGWCC 4 cut(s) 629, 1218, 1234, 1401
BmgT120I GGNCC 5 cut(s) 629, 971, 1218, 1234, 1401
BmiI GGNNCC 3 cut(s) 630, 637, 973
BmrFI CCNGG 7 cut(s) 95, 376, 633, 1116, 1226, 1294, 1445
BmsI GCATC 3 cut(s) 430, 1072, 1350
BoxI GACNNNNGTC 1 cut(s) 498
BpiI GAAGAC 1 cut(s) 1295
BpmI CTGGAG 1 cut(s) 1427
Bpu10I CCTNAGC 2 cut(s) 321, 1062
Bpu1102I GCTNAGC 1 cut(s) 68
BpuEI CTTGAG 1 cut(s) 280
BpuMI CCSGG 1 cut(s) 376
BsaJI CCNNGG 5 cut(s) 73, 94, 269, 976, 1293
Bsc4I CCNNNNNNNGG 4 cut(s) 100, 645, 1183, 1231
Bse118I RCCGGY 1 cut(s) 714
Bse1I ACTGG 4 cut(s) 160, 602, 650, 1278
Bse21I CCTNAGG 1 cut(s) 1247
Bse3DI GCAATG 2 cut(s) 916, 1026
BseBI CCWGG 6 cut(s) 95, 633, 1116, 1226, 1294, 1445
BseDI CCNNGG 5 cut(s) 73, 94, 269, 976, 1293
BseGI GGATG 1 cut(s) 412
BseLI CCNNNNNNNGG 4 cut(s) 100, 645, 1183, 1231
BseMI GCAATG 2 cut(s) 916, 1026
BseMII CTCAG 5 cut(s) 59, 335, 962, 1053, 1238
BseNI ACTGG 4 cut(s) 160, 602, 650, 1278
BseRI GAGGAG 2 cut(s) 593, 929
BseSI GKGCMC 1 cut(s) 210
BseXI GCAGC 8 cut(s) 76, 154, 391, 419, 673, 730, 1024, 1032
BseYI CCCAGC 1 cut(s) 898
BsgI GTGCAG 2 cut(s) 329, 1023
BshFI GGCC 4 cut(s) 301, 374, 841, 972
BshNI GGYRCC 1 cut(s) 635
BsiHKAI GWGCWC 2 cut(s) 181, 210
BsiSI CCGG 2 cut(s) 375, 715
BslI CCNNNNNNNGG 4 cut(s) 100, 645, 1183, 1231
BsmAI GTCTC 1 cut(s) 1306
BsnI GGCC 4 cut(s) 301, 374, 841, 972
Bsp1286I GDGCHC 2 cut(s) 181, 210
Bsp143I GATC 8 cut(s) 85, 251, 589, 669, 692, 1002, 1090, 1438
Bsp1720I GCTNAGC 1 cut(s) 68
BspACI CCGC 4 cut(s) 83, 302, 680, 754
BspANI GGCC 4 cut(s) 301, 374, 841, 972
BspCNI CTCAG 5 cut(s) 60, 334, 961, 1054, 1239
BspHI TCATGA 1 cut(s) 858
BspLI GGNNCC 3 cut(s) 630, 637, 973
BspMAI CTGCAG 2 cut(s) 409, 778
BspMI ACCTGC 2 cut(s) 767, 781
BspPI GGATC 6 cut(s) 93, 259, 584, 700, 1098, 1446
BspQI GCTCTTC 1 cut(s) 7
BspT107I GGYRCC 1 cut(s) 635
BsrDI GCAATG 2 cut(s) 916, 1026
BsrFI RCCGGY 1 cut(s) 714
BsrI ACTGG 4 cut(s) 160, 602, 650, 1278
BssAI RCCGGY 1 cut(s) 714
BssECI CCNNGG 5 cut(s) 73, 94, 269, 976, 1293
BssMI GATC 8 cut(s) 85, 251, 589, 669, 692, 1002, 1090, 1438
BssT1I CCWWGG 2 cut(s) 73, 976
Bst2UI CCWGG 6 cut(s) 95, 633, 1116, 1226, 1294, 1445
Bst4CI ACNGT 4 cut(s) 59, 314, 611, 986
Bst6I CTCTTC 8 cut(s) 7, 280, 692, 807, 1182, 1302, 1344, 1425
BstAPI GCANNNNNTGC 1 cut(s) 176
BstC8I GCNNGC 4 cut(s) 38, 619, 659, 723
BstDEI CTNAG 5 cut(s) 68, 321, 948, 1062, 1247
BstDSI CCRYGG 1 cut(s) 269
BstF5I GGATG 1 cut(s) 412
BstKTI GATC 8 cut(s) 88, 254, 592, 672, 695, 1005, 1093, 1441
BstMAI GTCTC 1 cut(s) 1306
BstMBI GATC 8 cut(s) 85, 251, 589, 669, 692, 1002, 1090, 1438
BstMWI GCNNNNNNNGC 4 cut(s) 176, 416, 715, 1051
BstNI CCWGG 6 cut(s) 95, 633, 1116, 1226, 1294, 1445
BstNSI RCATGY 2 cut(s) 661, 680
BstPAI GACNNNNGTC 1 cut(s) 498
BstSCI CCNGG 7 cut(s) 93, 374, 631, 1114, 1224, 1292, 1443
BstSFI CTRYAG 2 cut(s) 405, 774
BstSLI GKGCMC 1 cut(s) 210
BstV1I GCAGC 8 cut(s) 76, 154, 391, 419, 673, 730, 1024, 1032
BstV2I GAAGAC 1 cut(s) 1295
BstX2I RGATCY 2 cut(s) 85, 1438
BstXI CCANNNNNNTGG 1 cut(s) 201
BstYI RGATCY 2 cut(s) 85, 1438
Bsu36I CCTNAGG 1 cut(s) 1247
BsuRI GGCC 4 cut(s) 301, 374, 841, 972
BtgI CCRYGG 1 cut(s) 269
BtsCI GGATG 1 cut(s) 412
BtsI GCAGTG 3 cut(s) 169, 341, 608
BtsIMutI CAGTG 6 cut(s) 169, 341, 487, 607, 608, 982
BveI ACCTGC 2 cut(s) 767, 781
Cac8I GCNNGC 4 cut(s) 38, 619, 659, 723
CaiI CAGNNNCTG 1 cut(s) 67
CciI TCATGA 1 cut(s) 858
Cfr10I RCCGGY 1 cut(s) 714
Cfr13I GGNCC 5 cut(s) 629, 971, 1218, 1234, 1401
Csp6I GTAC 3 cut(s) 243, 315, 759
CviAII CATG 6 cut(s) 201, 512, 658, 677, 859, 1144
CviQI GTAC 3 cut(s) 243, 315, 759
DdeI CTNAG 5 cut(s) 68, 321, 948, 1062, 1247
DpnI GATC 8 cut(s) 87, 253, 591, 671, 694, 1004, 1092, 1440
DpnII GATC 8 cut(s) 85, 251, 589, 669, 692, 1002, 1090, 1438
Eam1104I CTCTTC 8 cut(s) 7, 280, 692, 807, 1182, 1302, 1344, 1425
EarI CTCTTC 8 cut(s) 7, 280, 692, 807, 1182, 1302, 1344, 1425
Eco130I CCWWGG 2 cut(s) 73, 976
Eco47I GGWCC 4 cut(s) 629, 1218, 1234, 1401
Eco57I CTGAAG 2 cut(s) 916, 1217
Eco81I CCTNAGG 1 cut(s) 1247
EcoO109I RGGNCCY 2 cut(s) 629, 1218
EcoRII CCWGG 6 cut(s) 93, 631, 1114, 1224, 1292, 1443
EcoT14I CCWWGG 2 cut(s) 73, 976
EcoT22I ATGCAT 1 cut(s) 445
ErhI CCWWGG 2 cut(s) 73, 976
FaeI CATG 6 cut(s) 204, 515, 661, 680, 862, 1147
FalI AAGNNNNNCTT 6 cut(s) 29, 61, 533, 565, 1323, 1355
FatI CATG 6 cut(s) 200, 511, 657, 676, 858, 1143
FauI CCCGC 1 cut(s) 747
FbaI TGATCA 1 cut(s) 669
Fnu4HI GCNGC 9 cut(s) 65, 168, 302, 405, 408, 662, 719, 1038, 1046
FokI GGATG 1 cut(s) 399
Fsp4HI GCNGC 9 cut(s) 65, 168, 302, 405, 408, 662, 719, 1038, 1046
FspBI CTAG 2 cut(s) 498, 1328
GluI GCNGC 9 cut(s) 65, 168, 302, 405, 408, 662, 719, 1038, 1046
GsaI CCCAGC 1 cut(s) 902
GsuI CTGGAG 1 cut(s) 1427
HaeIII GGCC 4 cut(s) 301, 374, 841, 972
HapII CCGG 2 cut(s) 375, 715
Hin1II CATG 6 cut(s) 204, 515, 661, 680, 862, 1147
HindIII AAGCTT 1 cut(s) 707
HinfI GANTC 4 cut(s) 434, 488, 494, 508
HpaII CCGG 2 cut(s) 375, 715
HphI GGTGA 2 cut(s) 704, 715
Hpy166II GTNNAC 3 cut(s) 208, 959, 1124
Hpy188I TCNGA 6 cut(s) 103, 439, 493, 674, 951, 1186
Hpy188III TCNNGA 4 cut(s) 9, 734, 859, 1328
Hpy8I GTNNAC 3 cut(s) 208, 959, 1124
Hpy99I CGWCG 1 cut(s) 473
HpyAV CCTTC 4 cut(s) 101, 742, 946, 1061
HpyCH4III ACNGT 4 cut(s) 59, 314, 611, 986
HpyF10VI GCNNNNNNNGC 4 cut(s) 176, 416, 715, 1051
HpyF3I CTNAG 5 cut(s) 68, 321, 948, 1062, 1247
Hsp92II CATG 6 cut(s) 204, 515, 661, 680, 862, 1147
Ksp22I TGATCA 1 cut(s) 669
Kzo9I GATC 8 cut(s) 85, 251, 589, 669, 692, 1002, 1090, 1438
LguI GCTCTTC 1 cut(s) 7
LmnI GCTCC 1 cut(s) 916
Lsp1109I GCAGC 8 cut(s) 76, 154, 391, 419, 673, 730, 1024, 1032
LweI GCATC 3 cut(s) 430, 1072, 1350
MaeI CTAG 2 cut(s) 498, 1328
MaeIII GTNAC 2 cut(s) 449, 1025
MalI GATC 8 cut(s) 87, 253, 591, 671, 694, 1004, 1092, 1440
MboI GATC 8 cut(s) 85, 251, 589, 669, 692, 1002, 1090, 1438
MflI RGATCY 2 cut(s) 85, 1438
MhlI GDGCHC 2 cut(s) 181, 210
MluCI AATT 5 cut(s) 358, 831, 1205, 1451, 1483
MlyI GAGTC 3 cut(s) 443, 488, 517
MmeI TCCRAC 3 cut(s) 112, 540, 1143
Mph1103I ATGCAT 1 cut(s) 445
MroXI GAANNNNTTC 1 cut(s) 1338
MseI TTAA 2 cut(s) 264, 569
MslI CAYNNNNRTG 3 cut(s) 213, 966, 1148
MspA1I CMGCKG 3 cut(s) 67, 281, 304
MspI CCGG 2 cut(s) 375, 715
MspR9I CCNGG 7 cut(s) 95, 376, 633, 1116, 1226, 1294, 1445
MvaI CCWGG 6 cut(s) 95, 633, 1116, 1226, 1294, 1445
MwoI GCNNNNNNNGC 4 cut(s) 176, 416, 715, 1051
NciI CCSGG 1 cut(s) 376
NdeII GATC 8 cut(s) 85, 251, 589, 669, 692, 1002, 1090, 1438
NlaIII CATG 6 cut(s) 204, 515, 661, 680, 862, 1147
NlaIV GGNNCC 3 cut(s) 630, 637, 973
NmuCI GTSAC 1 cut(s) 449
NsiI ATGCAT 1 cut(s) 445
NspI RCATGY 2 cut(s) 661, 680
PaeI GCATGC 1 cut(s) 661
PagI TCATGA 1 cut(s) 858
PaqCI CACCTGC 1 cut(s) 767
PciSI GCTCTTC 1 cut(s) 7
PdmI GAANNNNTTC 1 cut(s) 1338
PfeI GAWTC 1 cut(s) 488
PflMI CCANNNNNTGG 2 cut(s) 645, 1231
PfoI TCCNGGA 1 cut(s) 1443
PkrI GCNGC 9 cut(s) 66, 169, 303, 406, 409, 663, 720, 1039, 1047
PleI GAGTC 3 cut(s) 442, 488, 516
PpsI GAGTC 3 cut(s) 442, 488, 516
PpuMI RGGWCCY 2 cut(s) 629, 1218
PshAI GACNNNNGTC 1 cut(s) 498
Psp5II RGGWCCY 2 cut(s) 629, 1218
Psp6I CCWGG 6 cut(s) 93, 631, 1114, 1224, 1292, 1443
PspFI CCCAGC 1 cut(s) 898
PspGI CCWGG 6 cut(s) 93, 631, 1114, 1224, 1292, 1443
PspN4I GGNNCC 3 cut(s) 630, 637, 973
PspPI GGNCC 5 cut(s) 629, 971, 1218, 1234, 1401
PspPPI RGGWCCY 2 cut(s) 629, 1218
PstI CTGCAG 2 cut(s) 409, 778
PstNI CAGNNNCTG 1 cut(s) 67
PsuI RGATCY 2 cut(s) 85, 1438
PvuII CAGCTG 2 cut(s) 67, 281
RsaI GTAC 3 cut(s) 244, 316, 760
RsaNI GTAC 3 cut(s) 243, 315, 759
RseI CAYNNNNRTG 3 cut(s) 213, 966, 1148
SapI GCTCTTC 1 cut(s) 7
SaqAI TTAA 2 cut(s) 264, 569
SatI GCNGC 9 cut(s) 65, 168, 302, 405, 408, 662, 719, 1038, 1046
Sau3AI GATC 8 cut(s) 85, 251, 589, 669, 692, 1002, 1090, 1438
Sau96I GGNCC 5 cut(s) 629, 971, 1218, 1234, 1401
SbfI CCTGCAGG 1 cut(s) 778
SchI GAGTC 3 cut(s) 443, 488, 517
ScrFI CCNGG 7 cut(s) 95, 376, 633, 1116, 1226, 1294, 1445
SdaI CCTGCAGG 1 cut(s) 778
SduI GDGCHC 2 cut(s) 181, 210
SfaNI GCATC 3 cut(s) 430, 1072, 1350
SfcI CTRYAG 2 cut(s) 405, 774
SinI GGWCC 4 cut(s) 629, 1218, 1234, 1401
SmiMI CAYNNNNRTG 3 cut(s) 213, 966, 1148
SmlI CTYRAG 1 cut(s) 295
SmoI CTYRAG 1 cut(s) 295
SphI GCATGC 1 cut(s) 661
Sse8387I CCTGCAGG 1 cut(s) 778
Sse9I AATT 5 cut(s) 358, 831, 1205, 1451, 1483
SsiI CCGC 4 cut(s) 83, 302, 680, 754
SspMI CTAG 2 cut(s) 498, 1328
StyD4I CCNGG 7 cut(s) 93, 374, 631, 1114, 1224, 1292, 1443
StyI CCWWGG 2 cut(s) 73, 976
TaaI ACNGT 4 cut(s) 59, 314, 611, 986
TaqI TCGA 2 cut(s) 552, 695
TasI AATT 5 cut(s) 358, 831, 1205, 1451, 1483
TauI GCSGC 1 cut(s) 304
TfiI GAWTC 1 cut(s) 488
Tru1I TTAA 2 cut(s) 264, 569
Tru9I TTAA 2 cut(s) 264, 569
TscAI CASTG 6 cut(s) 169, 348, 487, 608, 614, 989
TseFI GTSAC 1 cut(s) 449
TseI GCWGC 8 cut(s) 64, 167, 404, 407, 661, 718, 1037, 1045
Tsp45I GTSAC 1 cut(s) 449
TspDTI ATGAA 7 cut(s) 844, 875, 1132, 1166, 1271, 1301, 1431
TspGWI ACGGA 2 cut(s) 36, 258
TspRI CASTG 6 cut(s) 169, 348, 487, 608, 614, 989
Van91I CCANNNNNTGG 2 cut(s) 645, 1231
VneI GTGCAC 1 cut(s) 206
VpaK11BI GGWCC 4 cut(s) 629, 1218, 1234, 1401
XapI RAATTY 2 cut(s) 1205, 1451
XbaI TCTAGA 1 cut(s) 1327
XceI RCATGY 2 cut(s) 661, 680
XcmI CCANNNNNNNNNTGG 1 cut(s) 983
XmnI GAANNNNTTC 1 cut(s) 1338
XspI CTAG 2 cut(s) 498, 1328
Zsp2I ATGCAT 1 cut(s) 445
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.