Prupe.4G210900_v2.0.a1

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000704
Physical Location & Seq
Reverse (-)
13156246 .. 13159211
2966 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G210900.1

Sequence Viewer

Length: 1431 bp
ATGGATATCCTACTTCTCATCACAGTTTTCCTCTTCCTCATCCCCATCTTCCTTCTCCTTGCAAGAAGAAAAAAGTTATCAAATAGGCTTCCTCCAGGCTCACTAGGGCTGCCCATAATAGGCCAGAGCCTTGGCCTTCTCAGAGCCATGCGTGCCAATACTGCTGAAAAATGGCTTGAAGAAAGAATCAGAAAGTATGGTTCAGTTTCGAAGCTAAGTCTCTTTGGGAAACCAACAGTCTTCATTCATGGACAGGCTGCAAACAAGTTTATATTCACCGTTGATGGCAGCACCATTACCAGCCAACAAACGGAGTCTATTCGTATGATTTTGGGTGACCGGAATATACTGGAGATGAGGGGCAATGATCACAAACGTTTAAGAAATGCTCTTATGTTGTTCTTGAAGCCTGAGTCACTGAAGCAATATGTTGGAAAAATGGACAAAGAAACCAGGAAGCATCTTGAGACGCATTGGCATGGCAAGCAACAAGTAAAAGCCTTGCCCCTGATGAAGATTCTCACGTTCAACATAATGTGCTCTCTGCTTTTTGGGCTTGAACAAGGAACTCGCAGAGACGAACTTGTGGAGTGTTTCGAACAAATGATAGAAGGAATGTGGTCAGTCCCAGTTAACTTTCCGTTCACGCGTTACAACCGCAGCCTCAAGGCTAGCAAGAGAGTTCAAAACATGATCAAGGAACTCATATCCAAAAAGAGGGCGGAACTCGAGCAGAAAACTATTTCTCCACTCCAAGACCTTGTCACTTGCTTGCTTAGCATCCGAAATGATTACAACGAAGAAGTTATAACAGAAAAAGAAATCTTGCACAATATCATGCTAATTATGGTTGCAGGATATGACACTTCATCTGTTGTGCTCACTTTTCTTTTTCGGTCTCTAGCTAACGAGCCAGCTGTTTATGAAGCCCTTCTTCAGGAGCAAGAAGAAATAGCTAAAAGCAAATCCCCAGGAGAGTTTCTGACATGGGAAGACCTTGCCAAGATGAAGTACACATGGAGAGTAGCAATGGAAACTATGAGAATAACTCCTCCTGTTTTTGGTGGCTTCAGGAAGGCCATGAAAGACATTGATTTTGATGGCTTCCTCATCCCCAAAGGGTGGCAAATATTCTGGGCCACTTCTATGACACACATGGACGATAGCGTTTTCCCGGAGCCATCAAAGTTTGATCCGACTAGGTTCGAGAACCAAGCATCAGTTCCACCCTACAACTTCATTCCATTCGGAGCGGGGCATCGAGTATGTCCAGGATACGAGTTTGCCAGGATTGAAATACTTGTTGTAATTCATTATATGGTAACTCAGTTCACATGGAAGCTCTGTGCAGACAACAAATTCAGTAGAGATCCCATGCCTGTACCTACTCAAGGACTGCCCTTAGAAATCAGGCCAAGGAAACCTTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00830 ko01100 map00830 map01100
Pfam Domains
Protein Families
p450

Protein Analysis

477

Amino Acids

54.93

Weight (kDa)

9.34

Isoelectric Point (pI)

50.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 809
AccB7I CCANNNNNTGG 1 cut(s) 1122
AccBSI CCGCTC 1 cut(s) 1253
AccII CGCG 1 cut(s) 649
AciI CCGC 3 cut(s) 658, 722, 1253
AclI AACGTT 1 cut(s) 376
AclWI GGATC 2 cut(s) 1187, 1364
AcsI RAATTY 1 cut(s) 1358
AcuI CTGAAG 3 cut(s) 440, 920, 1054
AfaI GTAC 2 cut(s) 1013, 1383
AfiI CCNNNNNNNGG 7 cut(s) 119, 310, 717, 937, 1061, 1122, 1391
AflIII ACRYGT 1 cut(s) 647
AgsI TTSAA 6 cut(s) 179, 406, 529, 560, 686, 1295
AjnI CCWGG 5 cut(s) 94, 452, 970, 1270, 1286
AjuI GAANNNNNNNTTGG 2 cut(s) 1206, 1238
AluBI AGCT 5 cut(s) 214, 905, 917, 956, 1342
AluI AGCT 5 cut(s) 214, 905, 917, 956, 1342
Alw21I GWGCWC 2 cut(s) 542, 882
Alw26I GTCTC 4 cut(s) 224, 461, 570, 903
AlwI GGATC 2 cut(s) 1187, 1364
Ama87I CYCGRG 1 cut(s) 728
AoxI GGCC 5 cut(s) 121, 133, 1077, 1137, 1412
ApeKI GCWGC 4 cut(s) 109, 257, 288, 660
ApoI RAATTY 1 cut(s) 1358
ArsI GACNNNNNNTTYG 2 cut(s) 1079, 1111
Asp700I GAANNNNTTC 1 cut(s) 930
AspS9I GGNCC 1 cut(s) 1137
AsuC2I CCSGG 1 cut(s) 1175
AsuHPI GGTGA 2 cut(s) 268, 347
AsuII TTCGAA 2 cut(s) 209, 597
AsuNHI GCTAGC 1 cut(s) 671
AvaI CYCGRG 1 cut(s) 728
BbsI GAAGAC 2 cut(s) 232, 999
Bbv12I GWGCWC 2 cut(s) 542, 882
BbvI GCAGC 4 cut(s) 96, 244, 300, 672
BccI CCATC 4 cut(s) 53, 278, 1094, 1189
BciT130I CCWGG 5 cut(s) 96, 454, 972, 1272, 1288
BciVI GTATCC 1 cut(s) 1268
BclI TGATCA 2 cut(s) 367, 693
BcnI CCSGG 1 cut(s) 1175
BcoDI GTCTC 4 cut(s) 224, 461, 570, 903
BfaI CTAG 4 cut(s) 104, 672, 902, 1200
BfuI GTATCC 1 cut(s) 1268
BisI GCNGC 4 cut(s) 110, 258, 289, 661
BlpI GCTNAGC 1 cut(s) 776
BlsI GCNGC 4 cut(s) 111, 259, 290, 662
Bme1390I CCNGG 6 cut(s) 96, 454, 972, 1175, 1272, 1288
BmeT110I CYCGRG 1 cut(s) 728
BmgT120I GGNCC 1 cut(s) 1137
BmiI GGNNCC 1 cut(s) 1179
BmrFI CCNGG 6 cut(s) 96, 454, 972, 1175, 1272, 1288
BmrI ACTGGG 1 cut(s) 623
BmsI GCATC 4 cut(s) 469, 789, 1226, 1267
BmtI GCTAGC 1 cut(s) 675
BmuI ACTGGG 1 cut(s) 623
BpiI GAAGAC 2 cut(s) 232, 999
BplI GAGNNNNNCTC 2 cut(s) 1033, 1065
BpmI CTGGAG 2 cut(s) 78, 371
Bpu1102I GCTNAGC 1 cut(s) 776
Bpu14I TTCGAA 2 cut(s) 209, 597
BpuEI CTTGAG 3 cut(s) 485, 650, 1374
BpuMI CCSGG 1 cut(s) 1175
BsaI GGTCTC 1 cut(s) 903
BsaJI CCNNGG 3 cut(s) 130, 970, 1415
BsaWI WCCGGW 1 cut(s) 339
BsaXI ACNNNNNCTCC 2 cut(s) 730, 760
Bsc4I CCNNNNNNNGG 7 cut(s) 119, 310, 717, 937, 1061, 1122, 1391
Bse1I ACTGG 2 cut(s) 354, 629
Bse3DI GCAATG 2 cut(s) 370, 1035
BseBI CCWGG 5 cut(s) 96, 454, 972, 1272, 1288
BseDI CCNNGG 3 cut(s) 130, 970, 1415
BseGI GGATG 3 cut(s) 39, 780, 1110
BseLI CCNNNNNNNGG 7 cut(s) 119, 310, 717, 937, 1061, 1122, 1391
BseMI GCAATG 2 cut(s) 370, 1035
BseMII CTCAG 3 cut(s) 154, 402, 1340
BseNI ACTGG 2 cut(s) 354, 629
BseRI GAGGAG 1 cut(s) 1041
BseXI GCAGC 4 cut(s) 96, 244, 300, 672
BsgI GTGCAG 1 cut(s) 1368
Bsh1236I CGCG 1 cut(s) 649
BshFI GGCC 5 cut(s) 123, 135, 1079, 1139, 1414
BsiHKAI GWGCWC 2 cut(s) 542, 882
BsiHKCI CYCGRG 1 cut(s) 728
BsiSI CCGG 2 cut(s) 340, 1175
BslFI GGGAC 1 cut(s) 611
BslI CCNNNNNNNGG 7 cut(s) 119, 310, 717, 937, 1061, 1122, 1391
BsmAI GTCTC 4 cut(s) 224, 461, 570, 903
BsmBI CGTCTC 2 cut(s) 461, 570
BsmFI GGGAC 1 cut(s) 611
BsnI GGCC 5 cut(s) 123, 135, 1079, 1139, 1414
Bso31I GGTCTC 1 cut(s) 903
BsoBI CYCGRG 1 cut(s) 728
Bsp119I TTCGAA 2 cut(s) 209, 597
Bsp1286I GDGCHC 2 cut(s) 542, 882
Bsp143I GATC 4 cut(s) 367, 693, 1192, 1369
Bsp1720I GCTNAGC 1 cut(s) 776
BspACI CCGC 3 cut(s) 658, 722, 1253
BspANI GGCC 5 cut(s) 123, 135, 1079, 1139, 1414
BspCNI CTCAG 3 cut(s) 153, 403, 1339
BspFNI CGCG 1 cut(s) 649
BspLI GGNNCC 1 cut(s) 1179
BspOI GCTAGC 1 cut(s) 675
BspPI GGATC 2 cut(s) 1187, 1364
BspT104I TTCGAA 2 cut(s) 209, 597
BspTNI GGTCTC 1 cut(s) 903
BsrBI CCGCTC 1 cut(s) 1253
BsrDI GCAATG 2 cut(s) 370, 1035
BsrI ACTGG 2 cut(s) 354, 629
BssECI CCNNGG 3 cut(s) 130, 970, 1415
BssMI GATC 4 cut(s) 367, 693, 1192, 1369
BssT1I CCWWGG 2 cut(s) 130, 1415
Bst2UI CCWGG 5 cut(s) 96, 454, 972, 1272, 1288
Bst4CI ACNGT 3 cut(s) 25, 238, 280
Bst6I CTCTTC 1 cut(s) 38
BstBI TTCGAA 2 cut(s) 209, 597
BstC8I GCNNGC 5 cut(s) 153, 485, 673, 773, 915
BstDEI CTNAG 6 cut(s) 140, 215, 411, 776, 1326, 1402
BstEII GGTNACC 1 cut(s) 335
BstENI CCTNNNNNAGG 2 cut(s) 935, 1389
BstF5I GGATG 3 cut(s) 39, 780, 1110
BstFNI CGCG 1 cut(s) 649
BstKTI GATC 4 cut(s) 370, 696, 1195, 1372
BstMAI GTCTC 4 cut(s) 224, 461, 570, 903
BstMBI GATC 4 cut(s) 367, 693, 1192, 1369
BstMWI GCNNNNNNNGC 5 cut(s) 152, 161, 484, 553, 777
BstNI CCWGG 5 cut(s) 96, 454, 972, 1272, 1288
BstPI GGTNACC 1 cut(s) 335
BstSCI CCNGG 6 cut(s) 94, 452, 970, 1173, 1270, 1286
BstUI CGCG 1 cut(s) 649
BstV1I GCAGC 4 cut(s) 96, 244, 300, 672
BstV2I GAAGAC 2 cut(s) 232, 999
BstX2I RGATCY 1 cut(s) 1369
BstXI CCANNNNNNTGG 1 cut(s) 131
BstYI RGATCY 1 cut(s) 1369
BsuI GTATCC 1 cut(s) 1268
BsuRI GGCC 5 cut(s) 123, 135, 1079, 1139, 1414
BtsCI GGATG 3 cut(s) 39, 780, 1110
BtsIMutI CAGTG 1 cut(s) 416
Cac8I GCNNGC 5 cut(s) 153, 485, 673, 773, 915
Cfr13I GGNCC 1 cut(s) 1137
CseI GACGC 1 cut(s) 478
Csp6I GTAC 2 cut(s) 1012, 1382
CviQI GTAC 2 cut(s) 1012, 1382
DdeI CTNAG 6 cut(s) 140, 215, 411, 776, 1326, 1402
DpnI GATC 4 cut(s) 369, 695, 1194, 1371
DpnII GATC 4 cut(s) 367, 693, 1192, 1369
Eam1104I CTCTTC 1 cut(s) 38
EarI CTCTTC 1 cut(s) 38
EciI GGCGGA 1 cut(s) 737
Eco130I CCWWGG 2 cut(s) 130, 1415
Eco31I GGTCTC 1 cut(s) 903
Eco32I GATATC 1 cut(s) 7
Eco57I CTGAAG 3 cut(s) 440, 920, 1054
Eco88I CYCGRG 1 cut(s) 728
Eco91I GGTNACC 1 cut(s) 335
EcoNI CCTNNNNNAGG 2 cut(s) 935, 1389
EcoO65I GGTNACC 1 cut(s) 335
EcoRII CCWGG 5 cut(s) 94, 452, 970, 1270, 1286
EcoRV GATATC 1 cut(s) 7
EcoT14I CCWWGG 2 cut(s) 130, 1415
ErhI CCWWGG 2 cut(s) 130, 1415
Esp3I CGTCTC 2 cut(s) 461, 570
FalI AAGNNNNNCTT 3 cut(s) 918, 950, 1408
FaqI GGGAC 1 cut(s) 611
FauI CCCGC 1 cut(s) 1246
FbaI TGATCA 2 cut(s) 367, 693
Fnu4HI GCNGC 4 cut(s) 110, 258, 289, 661
FokI GGATG 3 cut(s) 26, 767, 1097
Fsp4HI GCNGC 4 cut(s) 110, 258, 289, 661
FspBI CTAG 4 cut(s) 104, 672, 902, 1200
GluI GCNGC 4 cut(s) 110, 258, 289, 661
GsuI CTGGAG 2 cut(s) 78, 371
HaeIII GGCC 5 cut(s) 123, 135, 1079, 1139, 1414
HapII CCGG 2 cut(s) 340, 1175
HgaI GACGC 1 cut(s) 478
HincII GTYRAC 1 cut(s) 634
HindII GTYRAC 1 cut(s) 634
HinfI GANTC 4 cut(s) 186, 314, 413, 517
HpaI GTTAAC 1 cut(s) 634
HpaII CCGG 2 cut(s) 340, 1175
HphI GGTGA 2 cut(s) 268, 347
Hpy166II GTNNAC 4 cut(s) 634, 645, 1014, 1332
Hpy188I TCNGA 6 cut(s) 143, 191, 785, 984, 1197, 1250
Hpy188III TCNNGA 5 cut(s) 403, 464, 938, 1072, 1207
Hpy8I GTNNAC 4 cut(s) 634, 645, 1014, 1332
HpyAV CCTTC 5 cut(s) 62, 146, 605, 941, 1069
HpyCH4III ACNGT 3 cut(s) 25, 238, 280
HpyCH4IV ACGT 2 cut(s) 376, 524
HpyCH4V TGCA 5 cut(s) 62, 260, 829, 854, 1349
HpyF10VI GCNNNNNNNGC 5 cut(s) 152, 161, 484, 553, 777
HpyF3I CTNAG 6 cut(s) 140, 215, 411, 776, 1326, 1402
HpySE526I ACGT 2 cut(s) 376, 524
Ksp22I TGATCA 2 cut(s) 367, 693
KspAI GTTAAC 1 cut(s) 634
Kzo9I GATC 4 cut(s) 367, 693, 1192, 1369
LmnI GCTCC 3 cut(s) 940, 1177, 1250
Lsp1109I GCAGC 4 cut(s) 96, 244, 300, 672
LweI GCATC 4 cut(s) 469, 789, 1226, 1267
MaeI CTAG 4 cut(s) 104, 672, 902, 1200
MaeII ACGT 2 cut(s) 376, 524
MaeIII GTNAC 5 cut(s) 335, 414, 650, 763, 1321
MalI GATC 4 cut(s) 369, 695, 1194, 1371
MbiI CCGCTC 1 cut(s) 1253
MboI GATC 4 cut(s) 367, 693, 1192, 1369
MflI RGATCY 1 cut(s) 1369
MhlI GDGCHC 2 cut(s) 542, 882
MluCI AATT 3 cut(s) 843, 1308, 1358
MluI ACGCGT 1 cut(s) 647
MlyI GAGTC 2 cut(s) 323, 422
MmeI TCCRAC 2 cut(s) 412, 1220
MnlI CCTC 8 cut(s) 41, 47, 102, 351, 674, 711, 1062, 1118
MroXI GAANNNNTTC 1 cut(s) 930
MseI TTAA 3 cut(s) 380, 633, 1429
MslI CAYNNNNRTG 2 cut(s) 477, 1145
MspA1I CMGCKG 1 cut(s) 917
MspI CCGG 2 cut(s) 340, 1175
MspR9I CCNGG 6 cut(s) 96, 454, 972, 1175, 1272, 1288
MvaI CCWGG 5 cut(s) 96, 454, 972, 1272, 1288
MvnI CGCG 1 cut(s) 649
MwoI GCNNNNNNNGC 5 cut(s) 152, 161, 484, 553, 777
NciI CCSGG 1 cut(s) 1175
NdeII GATC 4 cut(s) 367, 693, 1192, 1369
NheI GCTAGC 1 cut(s) 671
NlaIV GGNNCC 1 cut(s) 1179
NmuCI GTSAC 3 cut(s) 335, 414, 763
NspV TTCGAA 2 cut(s) 209, 597
PaeR7I CTCGAG 1 cut(s) 728
PdmI GAANNNNTTC 1 cut(s) 930
PfeI GAWTC 2 cut(s) 186, 517
PflFI GACNNNGTC 1 cut(s) 761
PflMI CCANNNNNTGG 1 cut(s) 1122
PfoI TCCNGGA 2 cut(s) 1173, 1270
PkrI GCNGC 4 cut(s) 111, 259, 290, 662
PleI GAGTC 2 cut(s) 322, 421
PpsI GAGTC 2 cut(s) 322, 421
PsiI TTATAA 1 cut(s) 809
Psp1406I AACGTT 1 cut(s) 376
Psp6I CCWGG 5 cut(s) 94, 452, 970, 1270, 1286
PspEI GGTNACC 1 cut(s) 335
PspGI CCWGG 5 cut(s) 94, 452, 970, 1270, 1286
PspN4I GGNNCC 1 cut(s) 1179
PspPI GGNCC 1 cut(s) 1137
PspXI VCTCGAGB 1 cut(s) 728
PsuI RGATCY 1 cut(s) 1369
PsyI GACNNNGTC 1 cut(s) 761
PvuII CAGCTG 1 cut(s) 917
RsaI GTAC 2 cut(s) 1013, 1383
RsaNI GTAC 2 cut(s) 1012, 1382
RseI CAYNNNNRTG 2 cut(s) 477, 1145
SaqAI TTAA 3 cut(s) 380, 633, 1429
SatI GCNGC 4 cut(s) 110, 258, 289, 661
Sau3AI GATC 4 cut(s) 367, 693, 1192, 1369
Sau96I GGNCC 1 cut(s) 1137
SchI GAGTC 2 cut(s) 323, 422
ScrFI CCNGG 6 cut(s) 96, 454, 972, 1175, 1272, 1288
SduI GDGCHC 2 cut(s) 542, 882
SfaNI GCATC 4 cut(s) 469, 789, 1226, 1267
Sfr274I CTCGAG 1 cut(s) 728
SfuI TTCGAA 2 cut(s) 209, 597
SlaI CTCGAG 1 cut(s) 728
SmiMI CAYNNNNRTG 2 cut(s) 477, 1145
SmlI CTYRAG 4 cut(s) 464, 665, 728, 1389
SmoI CTYRAG 4 cut(s) 464, 665, 728, 1389
Sse9I AATT 3 cut(s) 843, 1308, 1358
SsiI CCGC 3 cut(s) 658, 722, 1253
SspI AATATT 1 cut(s) 1131
SspMI CTAG 4 cut(s) 104, 672, 902, 1200
StyD4I CCNGG 6 cut(s) 94, 452, 970, 1173, 1270, 1286
StyI CCWWGG 2 cut(s) 130, 1415
TaaI ACNGT 3 cut(s) 25, 238, 280
TaiI ACGT 2 cut(s) 379, 527
TaqI TCGA 5 cut(s) 209, 597, 729, 1206, 1261
TaqII GACCGA 1 cut(s) 885
TasI AATT 3 cut(s) 843, 1308, 1358
TatI WGTACW 1 cut(s) 1011
TfiI GAWTC 2 cut(s) 186, 517
Tru1I TTAA 3 cut(s) 380, 633, 1429
Tru9I TTAA 3 cut(s) 380, 633, 1429
TscAI CASTG 1 cut(s) 423
TseFI GTSAC 3 cut(s) 335, 414, 763
TseI GCWGC 4 cut(s) 109, 257, 288, 660
Tsp45I GTSAC 3 cut(s) 335, 414, 763
TspDTI ATGAA 9 cut(s) 232, 236, 527, 858, 939, 1022, 1097, 1228, 1301
TspGWI ACGGA 2 cut(s) 326, 630
TspRI CASTG 1 cut(s) 423
Tth111I GACNNNGTC 1 cut(s) 761
Van91I CCANNNNNTGG 1 cut(s) 1122
XagI CCTNNNNNAGG 2 cut(s) 935, 1389
XapI RAATTY 1 cut(s) 1358
XhoI CTCGAG 1 cut(s) 728
XmnI GAANNNNTTC 1 cut(s) 930
XspI CTAG 4 cut(s) 104, 672, 902, 1200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.