pycom11g04350

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0000704
Physical Location & Seq
Reverse (-)
3384078 .. 3386102
2025 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g04350.4

Sequence Viewer

Length: 1437 bp
ATGGAAGCTTTCATTGCAGTAATTGTAGTAACTCTGTTCATCGCTTTTTTCCTTTCAAAATTTCTGTTTAAGGATCAGACCAAAAACCTGCCAGGAGGGTCTTTAGGCTTTCCCTTAATCGGAGAGACGTTCAGCTTTCTTCGAGCACAGAAACAAGATCAAGGACCCGAATGGCTCGAAGAGAGAACATCAAAGCATGGACCAGTGTTCAAAACCTCCTTGATGGGTTCCCCAACTGTGGTGGTTGTTGGTCAAGCGGGTAACAAGTTCGTCCTTGGTGCTGAGGATGATGTCCTTGCCGCCAAGCAACCTGTCACCCTGGTAGCCATTTCTGGAAAGCAAAATATATTTGAACTTACAGGCTCAAGGTACAGATTGGTAAAGGGAGCAATGGTGAGCTTCTTAAAGCCAGAAAGTCTACAGAACTATATTAAACGAATGGATGGACTGATCAAGACCATGTTACTAAAAGAAACCGAAAATAAAGACACCATAAAAGTTGTGGTCACCATGAAGAAATTTACATTCACCATAGCATCCAGCATCCTTTTCGGCATCGAGGATGAGCGCATTAGGGAGGTTTTGTTTGATGATTTTTCTTTAGCATTCAAAGCAGTTTGGTCTCTTCCTGTTAACTTCCCTGGCACTGTTTACTGGAAAGGCCTAAGAGCCCGGTCAAGGATTGCTAACCAGATTTTGCCAATACTTGAGCAAAGAAAGGAGGCGTTTTCAAAAGGAAAATTAAGCCCTACAAGCGATGTTTTCTCATCATTACTAGCATTAAGAGATGAAAATGAAGAACCTGTTTCAGATGATTTGATCGTGGATAATTATGTCACATTGATGGTAGCTAGTCACGACACTTCAGCCATTCTTCTGAGCCTGATGATATGGAAGCTGTCCAGAGACTCTGAGATATACAACAAAGTTTTAGAGGAACAAATGGACATTATAGGGAAGAGGGAGGAGGGAGCAGAAAATAGGCTGACTTGGGCTGAGATACAAAAGATGAAATACACATGGAGAGTTGCACAAGAGCTGATGAGGATTATCCCTCCTGTGTTTGGCAGCTTTAGAAAAGCACTTAAGGACATTGAATATGGTGGCTATGATATCCCCAAGGGATGGCAGGTGTTTTGGGTGGCCCATGGAACTCATATGAACAAAGAGACATTTGACAAGCCTACAGAGTTTGATCGATCAAGGTTTGAGAACCCATCAAAACCAATCCCTCCCTATGCTTATATTCCATTTGGAGGAGGCCTCCACACTTGCATAGGGAATGAGTTTGCAAGAGTAGAAGTGCTCACTATCATCCACAACTTGGTGACAATGTATGAGTGGTCTCCGGTGTACCCCGATGAAGCTATCACCAGGCAACCAATGCCATATCCATCCATGGGTCTCCCAATCAAGATCAAACCAAGGAAGCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

479

Amino Acids

54.3

Weight (kDa)

8.75

Isoelectric Point (pI)

36.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1120
Acc36I ACCTGC 2 cut(s) 96, 1120
AccB7I CCANNNNNTGG 2 cut(s) 1125, 1324
AccI GTMKAC 1 cut(s) 418
AciI CCGC 2 cut(s) 257, 300
AclWI GGATC 1 cut(s) 81
AcsI RAATTY 2 cut(s) 59, 518
AcuI CTGAAG 1 cut(s) 849
AfaI GTAC 2 cut(s) 371, 1355
AfiI CCNNNNNNNGG 8 cut(s) 119, 238, 678, 1064, 1125, 1256, 1324, 1400
AflII CTTAAG 1 cut(s) 1085
AgsI TTSAA 6 cut(s) 57, 211, 353, 610, 732, 1097
AjnI CCWGG 4 cut(s) 91, 318, 640, 1373
AluBI AGCT 8 cut(s) 8, 135, 399, 851, 898, 1039, 1071, 1367
AluI AGCT 8 cut(s) 8, 135, 399, 851, 898, 1039, 1071, 1367
Alw21I GWGCWC 2 cut(s) 148, 1308
Alw26I GTCTC 6 cut(s) 119, 627, 900, 1163, 1350, 1409
AlwI GGATC 1 cut(s) 81
AoxI GGCC 3 cut(s) 661, 1143, 1261
ApeKI GCWGC 1 cut(s) 1068
ApoI RAATTY 2 cut(s) 59, 518
AspLEI GCGC 1 cut(s) 570
AspS9I GGNCC 3 cut(s) 164, 200, 1144
AsuC2I CCSGG 1 cut(s) 673
AsuHPI GGTGA 6 cut(s) 307, 406, 499, 520, 1339, 1363
AvaII GGWCC 2 cut(s) 164, 200
BanII GRGCYC 1 cut(s) 673
Bbv12I GWGCWC 2 cut(s) 148, 1308
BbvCI CCTCAGC 1 cut(s) 282
BbvI GCAGC 1 cut(s) 1080
BccI CCATC 6 cut(s) 217, 437, 838, 1119, 1225, 1402
BcgI CGANNNNNNTGC 2 cut(s) 532, 566
BciT130I CCWGG 4 cut(s) 93, 320, 642, 1375
BclI TGATCA 1 cut(s) 450
BcnI CCSGG 1 cut(s) 673
BcoDI GTCTC 6 cut(s) 119, 627, 900, 1163, 1350, 1409
BfaI CTAG 2 cut(s) 776, 852
BfmI CTRYAG 2 cut(s) 419, 1185
BfrI CTTAAG 1 cut(s) 1085
BfuAI ACCTGC 2 cut(s) 96, 1120
BisI GCNGC 2 cut(s) 300, 1069
BlsI GCNGC 2 cut(s) 301, 1070
Bme1390I CCNGG 5 cut(s) 93, 320, 642, 673, 1375
Bme18I GGWCC 2 cut(s) 164, 200
BmgT120I GGNCC 3 cut(s) 164, 200, 1144
BmiI GGNNCC 2 cut(s) 166, 229
BmrFI CCNGG 5 cut(s) 93, 320, 642, 673, 1375
BmsI GCATC 3 cut(s) 545, 552, 564
BplI GAGNNNNNCTC 2 cut(s) 1248, 1280
Bpu10I CCTNAGC 1 cut(s) 282
BpuEI CTTGAG 2 cut(s) 349, 728
BpuMI CCSGG 1 cut(s) 673
Bsa29I ATCGAT 1 cut(s) 1198
BsaI GGTCTC 3 cut(s) 627, 1350, 1409
BsaJI CCNNGG 7 cut(s) 274, 318, 640, 1119, 1147, 1398, 1424
BsaWI WCCGGW 1 cut(s) 1348
BsaXI ACNNNNNCTCC 4 cut(s) 378, 408, 569, 599
Bsc4I CCNNNNNNNGG 8 cut(s) 119, 238, 678, 1064, 1125, 1256, 1324, 1400
Bse1I ACTGG 2 cut(s) 203, 659
Bse3DI GCAATG 2 cut(s) 12, 396
BseBI CCWGG 4 cut(s) 93, 320, 642, 1375
BseCI ATCGAT 1 cut(s) 1198
BseDI CCNNGG 7 cut(s) 274, 318, 640, 1119, 1147, 1398, 1424
BseGI GGATG 8 cut(s) 292, 448, 536, 543, 568, 1130, 1314, 1394
BseLI CCNNNNNNNGG 8 cut(s) 119, 238, 678, 1064, 1125, 1256, 1324, 1400
BseMI GCAATG 2 cut(s) 12, 396
BseMII CTCAG 4 cut(s) 273, 869, 903, 987
BseNI ACTGG 2 cut(s) 203, 659
BseRI GAGGAG 2 cut(s) 980, 1272
BseXI GCAGC 1 cut(s) 1080
BshFI GGCC 3 cut(s) 663, 1145, 1263
BshVI ATCGAT 1 cut(s) 1198
BsiHKAI GWGCWC 2 cut(s) 148, 1308
BsiSI CCGG 2 cut(s) 673, 1349
BslI CCNNNNNNNGG 8 cut(s) 119, 238, 678, 1064, 1125, 1256, 1324, 1400
BsmAI GTCTC 6 cut(s) 119, 627, 900, 1163, 1350, 1409
BsmBI CGTCTC 1 cut(s) 119
BsmI GAATGC 1 cut(s) 605
BsnI GGCC 3 cut(s) 663, 1145, 1263
Bso31I GGTCTC 3 cut(s) 627, 1350, 1409
Bsp1286I GDGCHC 3 cut(s) 148, 673, 1308
Bsp143I GATC 7 cut(s) 73, 157, 450, 819, 1195, 1199, 1416
Bsp19I CCATGG 2 cut(s) 1147, 1398
BspACI CCGC 2 cut(s) 257, 300
BspANI GGCC 3 cut(s) 663, 1145, 1263
BspCNI CTCAG 4 cut(s) 274, 870, 904, 988
BspDI ATCGAT 1 cut(s) 1198
BspLI GGNNCC 2 cut(s) 166, 229
BspMI ACCTGC 2 cut(s) 96, 1120
BspPI GGATC 1 cut(s) 81
BspTI CTTAAG 1 cut(s) 1085
BspTNI GGTCTC 3 cut(s) 627, 1350, 1409
BsrDI GCAATG 2 cut(s) 12, 396
BsrI ACTGG 2 cut(s) 203, 659
BssECI CCNNGG 7 cut(s) 274, 318, 640, 1119, 1147, 1398, 1424
BssMI GATC 7 cut(s) 73, 157, 450, 819, 1195, 1199, 1416
BssT1I CCWWGG 5 cut(s) 274, 1119, 1147, 1398, 1424
Bst2UI CCWGG 4 cut(s) 93, 320, 642, 1375
Bst4CI ACNGT 2 cut(s) 238, 649
Bst6I CTCTTC 3 cut(s) 174, 630, 953
BstAFI CTTAAG 1 cut(s) 1085
BstAPI GCANNNNNTGC 1 cut(s) 1384
BstDEI CTNAG 5 cut(s) 282, 665, 878, 912, 996
BstDSI CCRYGG 2 cut(s) 1147, 1398
BstEII GGTNACC 1 cut(s) 505
BstF5I GGATG 8 cut(s) 292, 448, 536, 543, 568, 1130, 1314, 1394
BstHHI GCGC 1 cut(s) 570
BstKTI GATC 7 cut(s) 76, 160, 453, 822, 1198, 1202, 1419
BstMAI GTCTC 6 cut(s) 119, 627, 900, 1163, 1350, 1409
BstMBI GATC 7 cut(s) 73, 157, 450, 819, 1195, 1199, 1416
BstMWI GCNNNNNNNGC 4 cut(s) 14, 611, 753, 1384
BstNI CCWGG 4 cut(s) 93, 320, 642, 1375
BstPI GGTNACC 1 cut(s) 505
BstSCI CCNGG 5 cut(s) 91, 318, 640, 671, 1373
BstSFI CTRYAG 2 cut(s) 419, 1185
BstV1I GCAGC 1 cut(s) 1080
Bsu15I ATCGAT 1 cut(s) 1198
BsuRI GGCC 3 cut(s) 663, 1145, 1263
BsuTUI ATCGAT 1 cut(s) 1198
BtgI CCRYGG 2 cut(s) 1147, 1398
BtgZI GCGATG 2 cut(s) 25, 771
BtsCI GGATG 8 cut(s) 292, 448, 536, 543, 568, 1130, 1314, 1394
BtsIMutI CAGTG 2 cut(s) 210, 645
BveI ACCTGC 2 cut(s) 96, 1120
CfoI GCGC 1 cut(s) 570
Cfr13I GGNCC 3 cut(s) 164, 200, 1144
ClaI ATCGAT 1 cut(s) 1198
Csp6I GTAC 2 cut(s) 370, 1354
CspCI CAANNNNNGTGG 2 cut(s) 222, 257
CviAII CATG 6 cut(s) 197, 460, 511, 1020, 1148, 1399
CviQI GTAC 2 cut(s) 370, 1354
DdeI CTNAG 5 cut(s) 282, 665, 878, 912, 996
DpnI GATC 7 cut(s) 75, 159, 452, 821, 1197, 1201, 1418
DpnII GATC 7 cut(s) 73, 157, 450, 819, 1195, 1199, 1416
Eam1104I CTCTTC 3 cut(s) 174, 630, 953
EarI CTCTTC 3 cut(s) 174, 630, 953
Eco130I CCWWGG 5 cut(s) 274, 1119, 1147, 1398, 1424
Eco147I AGGCCT 2 cut(s) 663, 1263
Eco24I GRGCYC 1 cut(s) 673
Eco31I GGTCTC 3 cut(s) 627, 1350, 1409
Eco32I GATATC 1 cut(s) 1114
Eco47I GGWCC 2 cut(s) 164, 200
Eco57I CTGAAG 1 cut(s) 849
Eco91I GGTNACC 1 cut(s) 505
EcoO109I RGGNCCY 1 cut(s) 164
EcoO65I GGTNACC 1 cut(s) 505
EcoRII CCWGG 4 cut(s) 91, 318, 640, 1373
EcoRV GATATC 1 cut(s) 1114
EcoT14I CCWWGG 5 cut(s) 274, 1119, 1147, 1398, 1424
EcoT38I GRGCYC 1 cut(s) 673
ErhI CCWWGG 5 cut(s) 274, 1119, 1147, 1398, 1424
Esp3I CGTCTC 1 cut(s) 119
FaeI CATG 6 cut(s) 200, 463, 514, 1023, 1151, 1402
FalI AAGNNNNNCTT 1 cut(s) 1417
FatI CATG 6 cut(s) 196, 459, 510, 1019, 1147, 1398
FauI CCCGC 1 cut(s) 250
FauNDI CATATG 1 cut(s) 1158
FbaI TGATCA 1 cut(s) 450
FblI GTMKAC 1 cut(s) 418
Fnu4HI GCNGC 2 cut(s) 300, 1069
FokI GGATG 8 cut(s) 299, 455, 523, 530, 575, 1137, 1301, 1381
FriOI GRGCYC 1 cut(s) 673
Fsp4HI GCNGC 2 cut(s) 300, 1069
FspBI CTAG 2 cut(s) 776, 852
GlaI GCGC 1 cut(s) 569
GluI GCNGC 2 cut(s) 300, 1069
HaeIII GGCC 3 cut(s) 663, 1145, 1263
HapII CCGG 2 cut(s) 673, 1349
HhaI GCGC 1 cut(s) 570
Hin1II CATG 6 cut(s) 200, 463, 514, 1023, 1151, 1402
Hin6I GCGC 1 cut(s) 568
HinP1I GCGC 1 cut(s) 568
HincII GTYRAC 1 cut(s) 634
HindII GTYRAC 1 cut(s) 634
HindIII AAGCTT 1 cut(s) 6
HinfI GANTC 1 cut(s) 908
HpaI GTTAAC 1 cut(s) 634
HpaII CCGG 2 cut(s) 673, 1349
HphI GGTGA 6 cut(s) 307, 406, 499, 520, 1339, 1363
Hpy166II GTNNAC 4 cut(s) 419, 634, 652, 1354
Hpy188I TCNGA 5 cut(s) 78, 122, 811, 879, 913
Hpy188III TCNNGA 5 cut(s) 333, 454, 857, 903, 1414
Hpy8I GTNNAC 4 cut(s) 419, 634, 652, 1354
HpyCH4III ACNGT 2 cut(s) 238, 649
HpyCH4IV ACGT 1 cut(s) 128
HpyCH4V TGCA 4 cut(s) 17, 1031, 1275, 1292
HpyF10VI GCNNNNNNNGC 4 cut(s) 14, 611, 753, 1384
HpyF3I CTNAG 5 cut(s) 282, 665, 878, 912, 996
HpySE526I ACGT 1 cut(s) 128
Hsp92II CATG 6 cut(s) 200, 463, 514, 1023, 1151, 1402
HspAI GCGC 1 cut(s) 568
Ksp22I TGATCA 1 cut(s) 450
KspAI GTTAAC 1 cut(s) 634
Kzo9I GATC 7 cut(s) 73, 157, 450, 819, 1195, 1199, 1416
LmnI GCTCC 2 cut(s) 386, 971
Lsp1109I GCAGC 1 cut(s) 1080
LweI GCATC 3 cut(s) 545, 552, 564
MaeI CTAG 2 cut(s) 776, 852
MaeII ACGT 1 cut(s) 128
MaeIII GTNAC 8 cut(s) 28, 260, 313, 462, 505, 835, 854, 1327
MalI GATC 7 cut(s) 75, 159, 452, 821, 1197, 1201, 1418
MboI GATC 7 cut(s) 73, 157, 450, 819, 1195, 1199, 1416
MboII GAAGA 7 cut(s) 131, 191, 526, 617, 809, 866, 970
MhlI GDGCHC 3 cut(s) 148, 673, 1308
MluCI AATT 5 cut(s) 21, 59, 518, 740, 829
MlyI GAGTC 1 cut(s) 902
MseI TTAA 9 cut(s) 69, 116, 404, 432, 633, 743, 782, 1086, 1435
MslI CAYNNNNRTG 1 cut(s) 842
MspCI CTTAAG 1 cut(s) 1085
MspI CCGG 2 cut(s) 673, 1349
MspR9I CCNGG 5 cut(s) 93, 320, 642, 673, 1375
Mva1269I GAATGC 1 cut(s) 605
MvaI CCWGG 4 cut(s) 93, 320, 642, 1375
MwoI GCNNNNNNNGC 4 cut(s) 14, 611, 753, 1384
NciI CCSGG 1 cut(s) 673
NcoI CCATGG 2 cut(s) 1147, 1398
NdeI CATATG 1 cut(s) 1158
NdeII GATC 7 cut(s) 73, 157, 450, 819, 1195, 1199, 1416
NlaIII CATG 6 cut(s) 200, 463, 514, 1023, 1151, 1402
NlaIV GGNNCC 2 cut(s) 166, 229
NmuCI GTSAC 5 cut(s) 313, 505, 835, 854, 1327
PaqCI CACCTGC 1 cut(s) 1120
PceI AGGCCT 2 cut(s) 663, 1263
PctI GAATGC 1 cut(s) 605
PflMI CCANNNNNTGG 2 cut(s) 1125, 1324
PkrI GCNGC 2 cut(s) 301, 1070
PleI GAGTC 1 cut(s) 902
PpsI GAGTC 1 cut(s) 902
PpuMI RGGWCCY 1 cut(s) 164
Psp5II RGGWCCY 1 cut(s) 164
Psp6I CCWGG 4 cut(s) 91, 318, 640, 1373
PspEI GGTNACC 1 cut(s) 505
PspGI CCWGG 4 cut(s) 91, 318, 640, 1373
PspN4I GGNNCC 2 cut(s) 166, 229
PspPI GGNCC 3 cut(s) 164, 200, 1144
PspPPI RGGWCCY 1 cut(s) 164
RsaI GTAC 2 cut(s) 371, 1355
RsaNI GTAC 2 cut(s) 370, 1354
RseI CAYNNNNRTG 1 cut(s) 842
SaqAI TTAA 9 cut(s) 69, 116, 404, 432, 633, 743, 782, 1086, 1435
SatI GCNGC 2 cut(s) 300, 1069
Sau3AI GATC 7 cut(s) 73, 157, 450, 819, 1195, 1199, 1416
Sau96I GGNCC 3 cut(s) 164, 200, 1144
SchI GAGTC 1 cut(s) 902
ScrFI CCNGG 5 cut(s) 93, 320, 642, 673, 1375
SduI GDGCHC 3 cut(s) 148, 673, 1308
SfaNI GCATC 3 cut(s) 545, 552, 564
SfcI CTRYAG 2 cut(s) 419, 1185
SinI GGWCC 2 cut(s) 164, 200
SmiMI CAYNNNNRTG 1 cut(s) 842
SmlI CTYRAG 3 cut(s) 364, 707, 1085
SmoI CTYRAG 3 cut(s) 364, 707, 1085
Sse9I AATT 5 cut(s) 21, 59, 518, 740, 829
SseBI AGGCCT 2 cut(s) 663, 1263
SsiI CCGC 2 cut(s) 257, 300
SspMI CTAG 2 cut(s) 776, 852
StuI AGGCCT 2 cut(s) 663, 1263
StyD4I CCNGG 5 cut(s) 91, 318, 640, 671, 1373
StyI CCWWGG 5 cut(s) 274, 1119, 1147, 1398, 1424
TaaI ACNGT 2 cut(s) 238, 649
TaiI ACGT 1 cut(s) 131
TaqI TCGA 4 cut(s) 142, 177, 558, 1198
TasI AATT 5 cut(s) 21, 59, 518, 740, 829
TauI GCSGC 1 cut(s) 302
Tru1I TTAA 9 cut(s) 69, 116, 404, 432, 633, 743, 782, 1086, 1435
Tru9I TTAA 9 cut(s) 69, 116, 404, 432, 633, 743, 782, 1086, 1435
TscAI CASTG 2 cut(s) 210, 652
TseFI GTSAC 5 cut(s) 313, 505, 835, 854, 1327
TseI GCWGC 1 cut(s) 1068
Tsp45I GTSAC 5 cut(s) 313, 505, 835, 854, 1327
TspDTI ATGAA 7 cut(s) 28, 527, 804, 810, 1025, 1175, 1377
TspRI CASTG 2 cut(s) 210, 652
Van91I CCANNNNNTGG 2 cut(s) 1125, 1324
Vha464I CTTAAG 1 cut(s) 1085
VpaK11BI GGWCC 2 cut(s) 164, 200
XapI RAATTY 2 cut(s) 59, 518
XcmI CCANNNNNNNNNTGG 1 cut(s) 499
XmiI GTMKAC 1 cut(s) 418
XspI CTAG 2 cut(s) 776, 852
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.