Prupe.6G041200_v2.0.a1

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000704
Physical Location & Seq
Reverse (-)
3052891 .. 3055351
2461 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G041200.1

Sequence Viewer

Length: 1437 bp
ATGACTTTGATTTTGGTAATTGCAATCACTTTGATCATAGCCTTCTTCCTTTCAAAATTTCTGTTCAAGGGTCATCAGGCCAAAAATCTCCCAGGAGGGTCCCTAGGGTACCCCTTACTAGGAGAGTCCTTGAGCTTTCGGCAAGCACAGAAGCAAAATCGAGGGCCTCAATGGTTCGAAGAAAGAGTATCAAAACATGGGCCAGTTTTCAAAACCTCCTTGATGGGCTCCCCAACTGTTGTTGTTACTGGTCAAGCAGGTAACAAGTTTGTGCTTGGTGCTCGAGATGATGTTCTTGCTACCAAGCAACCACCCACCCTTGCAACCATTGCCGGAAAGGAAAACATATTTGAACTTACTGGATCGAGGTACAAATTGGTAAAGGGAGCAATGATGAGCTTCTTGAAGCCTGAAAATCTTCAAAACATTGTCAAACATATGGATGAATTGATCAAGACCATATTGCTAAGAGAAACAGAGAACAAAGACACCATAAAAGGTGTGGCCACCATGAAGAAACTCACATTTGAAATAGCATCCAGCATCCTTTTTGGCATCAAGAATGAGCACACAACAGAGGCTTTGTCTGATGATTTTTCTTTAGCCTTCAAAGCAATTCCCACTCTTCCTTTCAATATCCCTGGCACAGTGTACTGGAGAGGCCTAAGAGCCAGGTCAAGAATTGTTAATCGGATTCTGCCAATTCTCAAGGAAAGAAGGGAGGAGCTCTCAAAGGGGAAGCTAAGCCCTACAAGTGATGTGTTCACTTGCTTGCTAACATTGACAGATGAAAATCAACACCCAATTTCTGATGATATGATCATAGATAATTATTTCACCTTGATTATTGCTAGTCATGACACCTCAGCCATTCTTCTCAGCCTAATGATATGGAAGCTGTCCAGAGACTCTCAGATCTACAACAAAGTTCTGGACGAACAAATGGACATTTTGAGAAAGAGGGAGGAGGGAATAGATGATGGGCTAACATGGGCTGAGATACACAAGATGAAATACACATGGAGAGTTGCACAAGAGCTGATGAGGATCATCCCTCCTGTGTTTGGCAGCTTTAGAACAGCAGTTAAAGACACTCAATATGGTGGCTATGACATTCCCAAAGGATGGCAGGTGTTTTGGATGGCACATGGAACTCACATGGACAAAGACATATTTGACAAGCCTACAGAGTTTGATCCATCACGTTTTGAGAACCCATCAAAACCAATCCCTCCCTACACTTATCTTCCATTTGGAGGAGGCCTTCACACTTGCATTGGGAATGAGTTTGCCAAGATAGAATTACTCATCACCATCCACAACTTGGTGACAAGGTTTGAATGGTCACAAGTTCACCCTGAGGAAGCAATAACCCGTAAACCAATGCCATATCCCTCCATGGGTCTTCCAATCAAGATCAAACCAAGAAAGCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

479

Amino Acids

54.28

Weight (kDa)

9.27

Isoelectric Point (pI)

34.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1120
Acc36I ACCTGC 2 cut(s) 248, 1120
Acc65I GGTACC 1 cut(s) 108
AccB1I GGYRCC 1 cut(s) 108
AccB7I CCANNNNNTGG 2 cut(s) 1125, 1324
AclWI GGATC 3 cut(s) 370, 1055, 1190
AcoI YGGCCR 1 cut(s) 504
AcsI RAATTY 1 cut(s) 56
AfaI GTAC 3 cut(s) 110, 371, 653
AfiI CCNNNNNNNGG 6 cut(s) 119, 1064, 1125, 1256, 1324, 1400
AjnI CCWGG 3 cut(s) 91, 640, 671
AluBI AGCT 8 cut(s) 135, 399, 727, 742, 898, 1039, 1071, 1432
AluI AGCT 8 cut(s) 135, 399, 727, 742, 898, 1039, 1071, 1432
Alw21I GWGCWC 3 cut(s) 283, 570, 729
Alw26I GTCTC 1 cut(s) 900
AlwI GGATC 3 cut(s) 370, 1055, 1190
Ama87I CYCGRG 1 cut(s) 282
AoxI GGCC 6 cut(s) 78, 164, 200, 504, 661, 1261
ApeKI GCWGC 1 cut(s) 1068
ApoI RAATTY 1 cut(s) 56
ArsI GACNNNNNNTTYG 1 cut(s) 27
Asp700I GAANNNNTTC 1 cut(s) 417
Asp718I GGTACC 1 cut(s) 108
AspA2I CCTAGG 1 cut(s) 103
AspS9I GGNCC 3 cut(s) 99, 164, 200
AsuHPI GGTGA 4 cut(s) 829, 1303, 1339, 1346
AsuII TTCGAA 1 cut(s) 177
AvaI CYCGRG 1 cut(s) 282
AvaII GGWCC 1 cut(s) 99
AvrII CCTAGG 1 cut(s) 103
AxyI CCTNAGG 1 cut(s) 1359
BalI TGGCCA 1 cut(s) 506
BanI GGYRCC 1 cut(s) 108
BanII GRGCYC 2 cut(s) 230, 729
BbsI GAAGAC 1 cut(s) 1397
Bbv12I GWGCWC 3 cut(s) 283, 570, 729
BbvCI CCTCAGC 1 cut(s) 865
BbvI GCAGC 1 cut(s) 1080
BccI CCATC 7 cut(s) 217, 974, 1119, 1135, 1207, 1225, 1322
BciT130I CCWGG 3 cut(s) 93, 642, 673
BclI TGATCA 3 cut(s) 33, 450, 819
BcoDI GTCTC 1 cut(s) 900
BfaI CTAG 3 cut(s) 104, 119, 852
BfmI CTRYAG 1 cut(s) 1185
BfuAI ACCTGC 2 cut(s) 248, 1120
BglII AGATCT 1 cut(s) 915
BisI GCNGC 1 cut(s) 1069
BlnI CCTAGG 1 cut(s) 103
BlpI GCTNAGC 1 cut(s) 743
BlsI GCNGC 1 cut(s) 1070
Bme1390I CCNGG 3 cut(s) 93, 642, 673
Bme18I GGWCC 1 cut(s) 99
BmeT110I CYCGRG 1 cut(s) 282
BmgT120I GGNCC 3 cut(s) 99, 164, 200
BmiI GGNNCC 4 cut(s) 100, 101, 110, 229
BmrFI CCNGG 3 cut(s) 93, 642, 673
BmsI GCATC 3 cut(s) 545, 552, 564
BpiI GAAGAC 1 cut(s) 1397
BplI GAGNNNNNCTC 2 cut(s) 713, 745
BpmI CTGGAG 1 cut(s) 676
Bpu10I CCTNAGC 1 cut(s) 865
Bpu1102I GCTNAGC 1 cut(s) 743
Bpu14I TTCGAA 1 cut(s) 177
BpuEI CTTGAG 2 cut(s) 151, 692
BsaBI GATNNNNATC 2 cut(s) 792, 1046
BsaJI CCNNGG 4 cut(s) 91, 103, 640, 1398
Bsc4I CCNNNNNNNGG 6 cut(s) 119, 1064, 1125, 1256, 1324, 1400
Bse1I ACTGG 4 cut(s) 203, 253, 364, 659
Bse21I CCTNAGG 1 cut(s) 1359
Bse3DI GCAATG 2 cut(s) 327, 396
Bse8I GATNNNNATC 2 cut(s) 792, 1046
BseBI CCWGG 3 cut(s) 93, 642, 673
BseDI CCNNGG 4 cut(s) 91, 103, 640, 1398
BseGI GGATG 7 cut(s) 448, 536, 543, 1050, 1130, 1146, 1314
BseJI GATNNNNATC 2 cut(s) 792, 1046
BseLI CCNNNNNNNGG 6 cut(s) 119, 1064, 1125, 1256, 1324, 1400
BseMI GCAATG 2 cut(s) 327, 396
BseMII CTCAG 5 cut(s) 879, 892, 926, 987, 1350
BseNI ACTGG 4 cut(s) 203, 253, 364, 659
BseRI GAGGAG 3 cut(s) 737, 980, 1272
BseXI GCAGC 1 cut(s) 1080
BshFI GGCC 6 cut(s) 80, 166, 202, 506, 663, 1263
BshNI GGYRCC 1 cut(s) 108
BsiHKAI GWGCWC 3 cut(s) 283, 570, 729
BsiHKCI CYCGRG 1 cut(s) 282
BsiSI CCGG 1 cut(s) 333
BslFI GGGAC 1 cut(s) 85
BslI CCNNNNNNNGG 6 cut(s) 119, 1064, 1125, 1256, 1324, 1400
BsmAI GTCTC 1 cut(s) 900
BsmFI GGGAC 1 cut(s) 85
BsnI GGCC 6 cut(s) 80, 166, 202, 506, 663, 1263
BsoBI CYCGRG 1 cut(s) 282
Bsp119I TTCGAA 1 cut(s) 177
Bsp1286I GDGCHC 4 cut(s) 230, 283, 570, 729
Bsp143I GATC 8 cut(s) 33, 362, 450, 819, 915, 1047, 1195, 1416
Bsp1720I GCTNAGC 1 cut(s) 743
Bsp19I CCATGG 1 cut(s) 1398
BspANI GGCC 6 cut(s) 80, 166, 202, 506, 663, 1263
BspCNI CTCAG 5 cut(s) 878, 891, 925, 988, 1351
BspHI TCATGA 1 cut(s) 856
BspLI GGNNCC 4 cut(s) 100, 101, 110, 229
BspMI ACCTGC 2 cut(s) 248, 1120
BspPI GGATC 3 cut(s) 370, 1055, 1190
BspT104I TTCGAA 1 cut(s) 177
BspT107I GGYRCC 1 cut(s) 108
BsrDI GCAATG 2 cut(s) 327, 396
BsrI ACTGG 4 cut(s) 203, 253, 364, 659
BssECI CCNNGG 4 cut(s) 91, 103, 640, 1398
BssMI GATC 8 cut(s) 33, 362, 450, 819, 915, 1047, 1195, 1416
BssT1I CCWWGG 2 cut(s) 103, 1398
Bst2UI CCWGG 3 cut(s) 93, 642, 673
Bst4CI ACNGT 2 cut(s) 238, 649
Bst6I CTCTTC 1 cut(s) 630
BstAPI GCANNNNNTGC 1 cut(s) 329
BstBI TTCGAA 1 cut(s) 177
BstC8I GCNNGC 2 cut(s) 144, 773
BstDEI CTNAG 8 cut(s) 467, 665, 743, 865, 878, 912, 996, 1359
BstDSI CCRYGG 1 cut(s) 1398
BstF5I GGATG 7 cut(s) 448, 536, 543, 1050, 1130, 1146, 1314
BstKTI GATC 8 cut(s) 36, 365, 453, 822, 918, 1050, 1198, 1419
BstMAI GTCTC 1 cut(s) 900
BstMBI GATC 8 cut(s) 33, 362, 450, 819, 915, 1047, 1195, 1416
BstMWI GCNNNNNNNGC 2 cut(s) 329, 611
BstNI CCWGG 3 cut(s) 93, 642, 673
BstSCI CCNGG 3 cut(s) 91, 640, 671
BstSFI CTRYAG 1 cut(s) 1185
BstV1I GCAGC 1 cut(s) 1080
BstV2I GAAGAC 1 cut(s) 1397
BstX2I RGATCY 1 cut(s) 915
BstYI RGATCY 1 cut(s) 915
Bsu36I CCTNAGG 1 cut(s) 1359
BsuRI GGCC 6 cut(s) 80, 166, 202, 506, 663, 1263
BtgI CCRYGG 1 cut(s) 1398
BtsCI GGATG 7 cut(s) 448, 536, 543, 1050, 1130, 1146, 1314
BtsIMutI CAGTG 1 cut(s) 654
BveI ACCTGC 2 cut(s) 248, 1120
Cac8I GCNNGC 2 cut(s) 144, 773
CciI TCATGA 1 cut(s) 856
Cfr13I GGNCC 3 cut(s) 99, 164, 200
Csp6I GTAC 3 cut(s) 109, 370, 652
CviAII CATG 8 cut(s) 197, 511, 857, 990, 1020, 1148, 1159, 1399
CviQI GTAC 3 cut(s) 109, 370, 652
DdeI CTNAG 8 cut(s) 467, 665, 743, 865, 878, 912, 996, 1359
DpnI GATC 8 cut(s) 35, 364, 452, 821, 917, 1049, 1197, 1418
DpnII GATC 8 cut(s) 33, 362, 450, 819, 915, 1047, 1195, 1416
EaeI YGGCCR 1 cut(s) 504
Eam1104I CTCTTC 1 cut(s) 630
EarI CTCTTC 1 cut(s) 630
Ecl136II GAGCTC 1 cut(s) 727
Eco130I CCWWGG 2 cut(s) 103, 1398
Eco147I AGGCCT 2 cut(s) 663, 1263
Eco24I GRGCYC 2 cut(s) 230, 729
Eco47I GGWCC 1 cut(s) 99
Eco53kI GAGCTC 1 cut(s) 727
Eco81I CCTNAGG 1 cut(s) 1359
Eco88I CYCGRG 1 cut(s) 282
EcoICRI GAGCTC 1 cut(s) 727
EcoO109I RGGNCCY 2 cut(s) 99, 164
EcoRII CCWGG 3 cut(s) 91, 640, 671
EcoT14I CCWWGG 2 cut(s) 103, 1398
EcoT38I GRGCYC 2 cut(s) 230, 729
ErhI CCWWGG 2 cut(s) 103, 1398
FaeI CATG 8 cut(s) 200, 514, 860, 993, 1023, 1151, 1162, 1402
FaqI GGGAC 1 cut(s) 85
FatI CATG 8 cut(s) 196, 510, 856, 989, 1019, 1147, 1158, 1398
FauNDI CATATG 1 cut(s) 438
FbaI TGATCA 3 cut(s) 33, 450, 819
Fnu4HI GCNGC 1 cut(s) 1069
FokI GGATG 7 cut(s) 455, 523, 530, 1037, 1137, 1153, 1301
FriOI GRGCYC 2 cut(s) 230, 729
Fsp4HI GCNGC 1 cut(s) 1069
FspBI CTAG 3 cut(s) 104, 119, 852
GluI GCNGC 1 cut(s) 1069
GsuI CTGGAG 1 cut(s) 676
HaeIII GGCC 6 cut(s) 80, 166, 202, 506, 663, 1263
HapII CCGG 1 cut(s) 333
Hin1II CATG 8 cut(s) 200, 514, 860, 993, 1023, 1151, 1162, 1402
HindIII AAGCTT 1 cut(s) 1430
HinfI GANTC 3 cut(s) 125, 694, 908
HpaII CCGG 1 cut(s) 333
HphI GGTGA 4 cut(s) 829, 1303, 1339, 1346
Hpy166II GTNNAC 4 cut(s) 652, 765, 1354, 1379
Hpy188I TCNGA 4 cut(s) 589, 693, 811, 915
Hpy188III TCNNGA 9 cut(s) 284, 403, 454, 559, 678, 857, 903, 932, 1414
Hpy8I GTNNAC 4 cut(s) 652, 765, 1354, 1379
HpyAV CCTTC 4 cut(s) 52, 616, 711, 1274
HpyCH4III ACNGT 2 cut(s) 238, 649
HpyCH4IV ACGT 1 cut(s) 1204
HpyCH4V TGCA 4 cut(s) 23, 323, 1031, 1275
HpyF10VI GCNNNNNNNGC 2 cut(s) 329, 611
HpyF3I CTNAG 8 cut(s) 467, 665, 743, 865, 878, 912, 996, 1359
HpySE526I ACGT 1 cut(s) 1204
Hsp92II CATG 8 cut(s) 200, 514, 860, 993, 1023, 1151, 1162, 1402
KflI GGGWCCC 1 cut(s) 99
KpnI GGTACC 1 cut(s) 112
Ksp22I TGATCA 3 cut(s) 33, 450, 819
Kzo9I GATC 8 cut(s) 33, 362, 450, 819, 915, 1047, 1195, 1416
LmnI GCTCC 3 cut(s) 233, 386, 724
Lsp1109I GCAGC 1 cut(s) 1080
LweI GCATC 3 cut(s) 545, 552, 564
MaeI CTAG 3 cut(s) 104, 119, 852
MaeII ACGT 1 cut(s) 1204
MaeIII GTNAC 4 cut(s) 244, 260, 1327, 1344
MalI GATC 8 cut(s) 35, 364, 452, 821, 917, 1049, 1197, 1418
MboI GATC 8 cut(s) 33, 362, 450, 819, 915, 1047, 1195, 1416
MboII GAAGA 8 cut(s) 37, 191, 410, 526, 617, 866, 1238, 1397
MflI RGATCY 1 cut(s) 915
MhlI GDGCHC 4 cut(s) 230, 283, 570, 729
MlsI TGGCCA 1 cut(s) 506
MluNI TGGCCA 1 cut(s) 506
MlyI GAGTC 2 cut(s) 134, 902
Mox20I TGGCCA 1 cut(s) 506
MroXI GAANNNNTTC 1 cut(s) 417
MscI TGGCCA 1 cut(s) 506
MseI TTAA 3 cut(s) 687, 1086, 1435
MslI CAYNNNNRTG 1 cut(s) 441
Msp20I TGGCCA 1 cut(s) 506
MspI CCGG 1 cut(s) 333
MspR9I CCNGG 3 cut(s) 93, 642, 673
MvaI CCWGG 3 cut(s) 93, 642, 673
MwoI GCNNNNNNNGC 2 cut(s) 329, 611
NcoI CCATGG 1 cut(s) 1398
NdeI CATATG 1 cut(s) 438
NdeII GATC 8 cut(s) 33, 362, 450, 819, 915, 1047, 1195, 1416
NlaIII CATG 8 cut(s) 200, 514, 860, 993, 1023, 1151, 1162, 1402
NlaIV GGNNCC 4 cut(s) 100, 101, 110, 229
NmuCI GTSAC 2 cut(s) 1327, 1344
NspV TTCGAA 1 cut(s) 177
PaeR7I CTCGAG 1 cut(s) 282
PagI TCATGA 1 cut(s) 856
PaqCI CACCTGC 1 cut(s) 1120
PceI AGGCCT 2 cut(s) 663, 1263
PdmI GAANNNNTTC 1 cut(s) 417
PfeI GAWTC 1 cut(s) 694
PflMI CCANNNNNTGG 2 cut(s) 1125, 1324
PkrI GCNGC 1 cut(s) 1070
PleI GAGTC 2 cut(s) 133, 902
PpsI GAGTC 2 cut(s) 133, 902
PpuMI RGGWCCY 1 cut(s) 99
Psp124BI GAGCTC 1 cut(s) 729
Psp5II RGGWCCY 1 cut(s) 99
Psp6I CCWGG 3 cut(s) 91, 640, 671
PspGI CCWGG 3 cut(s) 91, 640, 671
PspN4I GGNNCC 4 cut(s) 100, 101, 110, 229
PspPI GGNCC 3 cut(s) 99, 164, 200
PspPPI RGGWCCY 1 cut(s) 99
PsuI RGATCY 1 cut(s) 915
RsaI GTAC 3 cut(s) 110, 371, 653
RsaNI GTAC 3 cut(s) 109, 370, 652
RseI CAYNNNNRTG 1 cut(s) 441
SacI GAGCTC 1 cut(s) 729
SaqAI TTAA 3 cut(s) 687, 1086, 1435
SatI GCNGC 1 cut(s) 1069
Sau3AI GATC 8 cut(s) 33, 362, 450, 819, 915, 1047, 1195, 1416
Sau96I GGNCC 3 cut(s) 99, 164, 200
SchI GAGTC 2 cut(s) 134, 902
ScrFI CCNGG 3 cut(s) 93, 642, 673
SduI GDGCHC 4 cut(s) 230, 283, 570, 729
SfaNI GCATC 3 cut(s) 545, 552, 564
SfcI CTRYAG 1 cut(s) 1185
Sfr274I CTCGAG 1 cut(s) 282
SfuI TTCGAA 1 cut(s) 177
SinI GGWCC 1 cut(s) 99
SlaI CTCGAG 1 cut(s) 282
SmiMI CAYNNNNRTG 1 cut(s) 441
SmlI CTYRAG 3 cut(s) 130, 282, 707
SmoI CTYRAG 3 cut(s) 130, 282, 707
SseBI AGGCCT 2 cut(s) 663, 1263
SspMI CTAG 3 cut(s) 104, 119, 852
SstI GAGCTC 1 cut(s) 729
StuI AGGCCT 2 cut(s) 663, 1263
StyD4I CCNGG 3 cut(s) 91, 640, 671
StyI CCWWGG 2 cut(s) 103, 1398
TaaI ACNGT 2 cut(s) 238, 649
TaiI ACGT 1 cut(s) 1207
TaqI TCGA 4 cut(s) 160, 177, 283, 365
TatI WGTACW 1 cut(s) 651
TfiI GAWTC 1 cut(s) 694
Tru1I TTAA 3 cut(s) 687, 1086, 1435
Tru9I TTAA 3 cut(s) 687, 1086, 1435
TscAI CASTG 1 cut(s) 654
TseFI GTSAC 2 cut(s) 1327, 1344
TseI GCWGC 1 cut(s) 1068
Tsp45I GTSAC 2 cut(s) 1327, 1344
TspDTI ATGAA 4 cut(s) 459, 527, 804, 1025
TspRI CASTG 1 cut(s) 654
Van91I CCANNNNNTGG 2 cut(s) 1125, 1324
VpaK11BI GGWCC 1 cut(s) 99
XapI RAATTY 1 cut(s) 56
XcmI CCANNNNNNNNNTGG 2 cut(s) 499, 1321
XhoI CTCGAG 1 cut(s) 282
XmaJI CCTAGG 1 cut(s) 103
XmnI GAANNNNTTC 1 cut(s) 417
XspI CTAG 3 cut(s) 104, 119, 852
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.