Prupe.4G211000_v2.0.a1

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000704
Physical Location & Seq
Reverse (-)
13159666 .. 13161661
1996 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G211000.1

Sequence Viewer

Length: 1428 bp
ATGAATACCCTTCTTGTCACCCTTTTCTTCTTGGTCATCCCCATCTTCTTTCTCATTATGAGAAGAAGAAAATCATCGAAAAGGCTTCCTCCGGGCTCATTGGGACTACCCATAATAGGGCAGAGCCTTGGCTTTCTTCGAGCCATGCGCAACAACACTGCAGAAAAATGGCTTGAACAAAGAATAACCAAGTATGGTCCGGTTTCAAAGCTGAGTCTCTTTGGCAAGCCAACAGTCTTCATTCATGGACAGGCTGCAAACAAGTATGTATTCAACAATGATGGCAAAACCATTACCAGCCAACAACCTGAGTCTACTCGAATGATTTTAGGTGACCGGAACATATTGGAGCTGAGTGGCGAGGATCACAAGCGAGTTAGAAATGCTCTAATGGTGTTCTTGAAGCCTGAGTCATTGAAGCAATATGTAGGAAAATTGGACGAAGAAATCAGGAAGCATCTTGAGTTGAATTGGCATGGGAAGCAAAAAATAACAGTCTTGCCTCTCATGAAGAACCTCACGTTCAACATTATATGCTCGCTGCTTTTTGGGGTTGAACGAGGACCTCGCAGAGACGAACTCATTGAGTGTTTTCAACGAATGATAGAAGGACTGTGGTCAGTCCCTCTTAACTTGCCGTTCACGCGTTTCAACTGCAGCATCAAGGCAAGCAAGAAGGTTCAAAACATGCTTAAGGAACTAATTTGTGAAAAGAGGATGCAACTTGAGCAAAAAACTGCTTTACCACTCCAAGACCTTATCACTTGCTTGCTTAGCATTCGAAATGCTGACAATGAAGAAGAATTAACTGAAAAGGAGATCTTGCACAATATCATAATAGTTATGGTTGCAGGATATGACACTTCATCTGTGGTCATTACTTTTCTTTTGCGGCTTCTAGCTAATGAACCTGCTGTTTATGCAGCCCTTCTTCAAGAACAGGAAGAAATAGCTAGAAGCAAATCCTTAGGGGAACTTCTGACATGGGAAGATCTTGCTAAGATGAAGTACACATGGAGGGTAACAATGGAAATTCTGAGGACAACTCCTCCTGTCTTTGGTGGCATGAGGAGGGCTATGAAAGATATTGAGTATGGAGGATTCCTCATCCCTCAAGGGTGGCAAATATTCTGGGCTATTCCTATGACACACAATGACGATAGCATATTCCCTGAGCCATCAAAGTTCGATCCAAGTAGGTTCGAGAACCAAAAATCAGTTCCACCCTACAGCTTTGTTCCATTCGGAGGAGGAACACGAATATGTCCAGGATATGAGTTTGCCAGGATTGAAATCCTTGTTGCAATCCATTATATGGTAACTCAATTCACATGGAAGCTATGCGCAGACAACAAGTTCAGTAGGGTTCCCATGCCAGTACCCACTCAAGGACTGCCTATAGAAATCACGCCAAGGAAACAAATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00830 ko01100 map00830 map01100
Pfam Domains
Protein Families
p450

Protein Analysis

476

Amino Acids

54.65

Weight (kDa)

9.37

Isoelectric Point (pI)

59.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 149, 1345
Acc36I ACCTGC 1 cut(s) 919
AccB7I CCANNNNNTGG 1 cut(s) 1315
AccI GTMKAC 1 cut(s) 314
AccII CGCG 1 cut(s) 646
AciI CCGC 1 cut(s) 892
AclWI GGATC 2 cut(s) 372, 1184
AcsI RAATTY 1 cut(s) 1032
AfaI GTAC 2 cut(s) 1010, 1380
AfiI CCNNNNNNNGG 6 cut(s) 116, 117, 1058, 1247, 1315, 1388
AflII CTTAAG 1 cut(s) 692
AflIII ACRYGT 1 cut(s) 644
AjnI CCWGG 2 cut(s) 1267, 1283
AjuI GAANNNNNNNTTGG 2 cut(s) 1203, 1235
AluBI AGCT 6 cut(s) 211, 352, 902, 953, 1233, 1339
AluI AGCT 6 cut(s) 211, 352, 902, 953, 1233, 1339
Alw26I GTCTC 2 cut(s) 221, 567
AlwI GGATC 2 cut(s) 372, 1184
ApeKI GCWGC 4 cut(s) 254, 541, 657, 923
ApoI RAATTY 1 cut(s) 1032
AspLEI GCGC 2 cut(s) 150, 1346
AspS9I GGNCC 2 cut(s) 197, 563
AsuC2I CCSGG 1 cut(s) 93
AsuHPI GGTGA 2 cut(s) 10, 344
AsuII TTCGAA 1 cut(s) 781
AvaII GGWCC 2 cut(s) 197, 563
AxyI CCTNAGG 1 cut(s) 967
BanII GRGCYC 1 cut(s) 98
BbsI GAAGAC 1 cut(s) 229
BbvI GCAGC 4 cut(s) 241, 528, 669, 935
BccI CCATC 3 cut(s) 50, 275, 1186
BceAI ACGGC 1 cut(s) 622
BciT130I CCWGG 2 cut(s) 1269, 1285
BcnI CCSGG 1 cut(s) 93
BcoDI GTCTC 2 cut(s) 221, 567
BfaI CTAG 2 cut(s) 899, 954
BfmI CTRYAG 4 cut(s) 159, 655, 1228, 1398
BfrI CTTAAG 1 cut(s) 692
BfuAI ACCTGC 1 cut(s) 919
BglII AGATCT 2 cut(s) 819, 991
BisI GCNGC 5 cut(s) 255, 542, 658, 893, 924
BlpI GCTNAGC 1 cut(s) 773
BlsI GCNGC 5 cut(s) 256, 543, 659, 894, 925
Bme1390I CCNGG 3 cut(s) 93, 1269, 1285
Bme18I GGWCC 2 cut(s) 197, 563
BmgT120I GGNCC 2 cut(s) 197, 563
BmiI GGNNCC 1 cut(s) 1368
BmrFI CCNGG 3 cut(s) 93, 1269, 1285
BmsI GCATC 3 cut(s) 466, 669, 708
BoxI GACNNNNGTC 1 cut(s) 616
BpiI GAAGAC 1 cut(s) 229
BplI GAGNNNNNCTC 6 cut(s) 564, 596, 1030, 1062, 1089, 1121
Bpu10I CCTNAGC 1 cut(s) 1173
Bpu1102I GCTNAGC 1 cut(s) 773
Bpu14I TTCGAA 1 cut(s) 781
BpuEI CTTGAG 4 cut(s) 482, 746, 1098, 1371
BpuMI CCSGG 1 cut(s) 93
BsaBI GATNNNNATC 1 cut(s) 1292
BsaJI CCNNGG 2 cut(s) 127, 1412
BsaWI WCCGGW 2 cut(s) 199, 336
BsaXI ACNNNNNCTCC 2 cut(s) 1033, 1063
Bsc4I CCNNNNNNNGG 6 cut(s) 116, 117, 1058, 1247, 1315, 1388
Bse1I ACTGG 1 cut(s) 1376
Bse21I CCTNAGG 1 cut(s) 967
Bse8I GATNNNNATC 1 cut(s) 1292
BseBI CCWGG 2 cut(s) 1269, 1285
BseDI CCNNGG 2 cut(s) 127, 1412
BseGI GGATG 3 cut(s) 36, 723, 1107
BseJI GATNNNNATC 1 cut(s) 1292
BseLI CCNNNNNNNGG 6 cut(s) 116, 117, 1058, 1247, 1315, 1388
BseMII CTCAG 6 cut(s) 203, 300, 344, 399, 1028, 1164
BseNI ACTGG 1 cut(s) 1376
BseRI GAGGAG 3 cut(s) 1038, 1084, 1263
BseXI GCAGC 4 cut(s) 241, 528, 669, 935
Bsh1236I CGCG 1 cut(s) 646
BsiSI CCGG 3 cut(s) 92, 200, 337
BslFI GGGAC 2 cut(s) 117, 608
BslI CCNNNNNNNGG 6 cut(s) 116, 117, 1058, 1247, 1315, 1388
BsmAI GTCTC 2 cut(s) 221, 567
BsmBI CGTCTC 1 cut(s) 567
BsmFI GGGAC 2 cut(s) 117, 608
BsmI GAATGC 1 cut(s) 777
Bsp119I TTCGAA 1 cut(s) 781
Bsp1286I GDGCHC 1 cut(s) 98
Bsp143I GATC 4 cut(s) 364, 819, 991, 1189
Bsp1720I GCTNAGC 1 cut(s) 773
BspACI CCGC 1 cut(s) 892
BspCNI CTCAG 6 cut(s) 204, 301, 345, 400, 1029, 1165
BspFNI CGCG 1 cut(s) 646
BspHI TCATGA 1 cut(s) 507
BspLI GGNNCC 1 cut(s) 1368
BspMAI CTGCAG 2 cut(s) 163, 659
BspMI ACCTGC 1 cut(s) 919
BspPI GGATC 2 cut(s) 372, 1184
BspT104I TTCGAA 1 cut(s) 781
BspTI CTTAAG 1 cut(s) 692
BsrI ACTGG 1 cut(s) 1376
BssECI CCNNGG 2 cut(s) 127, 1412
BssMI GATC 4 cut(s) 364, 819, 991, 1189
BssT1I CCWWGG 2 cut(s) 127, 1412
Bst2UI CCWGG 2 cut(s) 1269, 1285
Bst4CI ACNGT 3 cut(s) 235, 496, 615
BstAFI CTTAAG 1 cut(s) 692
BstBI TTCGAA 1 cut(s) 781
BstC8I GCNNGC 4 cut(s) 227, 539, 670, 770
BstDEI CTNAG 9 cut(s) 212, 309, 353, 408, 773, 967, 999, 1037, 1173
BstEII GGTNACC 1 cut(s) 332
BstF5I GGATG 3 cut(s) 36, 723, 1107
BstFNI CGCG 1 cut(s) 646
BstHHI GCGC 2 cut(s) 150, 1346
BstKTI GATC 4 cut(s) 367, 822, 994, 1192
BstMAI GTCTC 2 cut(s) 221, 567
BstMBI GATC 4 cut(s) 364, 819, 991, 1189
BstMWI GCNNNNNNNGC 5 cut(s) 481, 643, 727, 774, 920
BstNI CCWGG 2 cut(s) 1269, 1285
BstNSI RCATGY 1 cut(s) 691
BstPAI GACNNNNGTC 1 cut(s) 616
BstPI GGTNACC 1 cut(s) 332
BstSCI CCNGG 3 cut(s) 91, 1267, 1283
BstSFI CTRYAG 4 cut(s) 159, 655, 1228, 1398
BstUI CGCG 1 cut(s) 646
BstV1I GCAGC 4 cut(s) 241, 528, 669, 935
BstV2I GAAGAC 1 cut(s) 229
BstX2I RGATCY 2 cut(s) 819, 991
BstYI RGATCY 2 cut(s) 819, 991
Bsu36I CCTNAGG 1 cut(s) 967
BtsCI GGATG 3 cut(s) 36, 723, 1107
BtsI GCAGTG 1 cut(s) 156
BtsIMutI CAGTG 1 cut(s) 156
BveI ACCTGC 1 cut(s) 919
Cac8I GCNNGC 4 cut(s) 227, 539, 670, 770
CciI TCATGA 1 cut(s) 507
CfoI GCGC 2 cut(s) 150, 1346
Cfr13I GGNCC 2 cut(s) 197, 563
Csp6I GTAC 2 cut(s) 1009, 1379
CviQI GTAC 2 cut(s) 1009, 1379
DdeI CTNAG 9 cut(s) 212, 309, 353, 408, 773, 967, 999, 1037, 1173
DpnI GATC 4 cut(s) 366, 821, 993, 1191
DpnII GATC 4 cut(s) 364, 819, 991, 1189
Eco130I CCWWGG 2 cut(s) 127, 1412
Eco24I GRGCYC 1 cut(s) 98
Eco47I GGWCC 2 cut(s) 197, 563
Eco81I CCTNAGG 1 cut(s) 967
Eco91I GGTNACC 1 cut(s) 332
EcoO109I RGGNCCY 1 cut(s) 563
EcoO65I GGTNACC 1 cut(s) 332
EcoRII CCWGG 2 cut(s) 1267, 1283
EcoT14I CCWWGG 2 cut(s) 127, 1412
EcoT38I GRGCYC 1 cut(s) 98
ErhI CCWWGG 2 cut(s) 127, 1412
Esp3I CGTCTC 1 cut(s) 567
FalI AAGNNNNNCTT 2 cut(s) 806, 838
FaqI GGGAC 2 cut(s) 117, 608
FblI GTMKAC 1 cut(s) 314
Fnu4HI GCNGC 5 cut(s) 255, 542, 658, 893, 924
FokI GGATG 3 cut(s) 23, 730, 1094
FriOI GRGCYC 1 cut(s) 98
Fsp4HI GCNGC 5 cut(s) 255, 542, 658, 893, 924
FspBI CTAG 2 cut(s) 899, 954
FspI TGCGCA 2 cut(s) 149, 1345
GlaI GCGC 2 cut(s) 149, 1345
GluI GCNGC 5 cut(s) 255, 542, 658, 893, 924
HapII CCGG 3 cut(s) 92, 200, 337
HhaI GCGC 2 cut(s) 150, 1346
Hin6I GCGC 2 cut(s) 148, 1344
HinP1I GCGC 2 cut(s) 148, 1344
HinfI GANTC 4 cut(s) 214, 311, 410, 1101
HpaII CCGG 3 cut(s) 92, 200, 337
HphI GGTGA 2 cut(s) 10, 344
Hpy166II GTNNAC 3 cut(s) 315, 642, 1011
Hpy188I TCNGA 3 cut(s) 981, 1038, 1247
Hpy188III TCNNGA 6 cut(s) 400, 451, 461, 508, 935, 1204
Hpy8I GTNNAC 3 cut(s) 315, 642, 1011
HpyAV CCTTC 4 cut(s) 20, 602, 670, 938
HpyCH4III ACNGT 3 cut(s) 235, 496, 615
HpyCH4IV ACGT 1 cut(s) 521
HpyCH4V TGCA 8 cut(s) 161, 257, 657, 721, 826, 851, 923, 1304
HpyF10VI GCNNNNNNNGC 5 cut(s) 481, 643, 727, 774, 920
HpyF3I CTNAG 9 cut(s) 212, 309, 353, 408, 773, 967, 999, 1037, 1173
HpySE526I ACGT 1 cut(s) 521
HspAI GCGC 2 cut(s) 148, 1344
Kzo9I GATC 4 cut(s) 364, 819, 991, 1189
LmnI GCTCC 1 cut(s) 349
Lsp1109I GCAGC 4 cut(s) 241, 528, 669, 935
LweI GCATC 3 cut(s) 466, 669, 708
MaeI CTAG 2 cut(s) 899, 954
MaeII ACGT 1 cut(s) 521
MaeIII GTNAC 4 cut(s) 16, 332, 1021, 1318
MalI GATC 4 cut(s) 366, 821, 993, 1191
MboI GATC 4 cut(s) 364, 819, 991, 1189
MflI RGATCY 2 cut(s) 819, 991
MhlI GDGCHC 1 cut(s) 98
MluCI AATT 6 cut(s) 434, 469, 702, 803, 1032, 1325
MluI ACGCGT 1 cut(s) 644
MlyI GAGTC 3 cut(s) 223, 320, 419
MseI TTAA 3 cut(s) 630, 693, 806
MslI CAYNNNNRTG 1 cut(s) 1261
MspCI CTTAAG 1 cut(s) 692
MspI CCGG 3 cut(s) 92, 200, 337
MspR9I CCNGG 3 cut(s) 93, 1269, 1285
Mva1269I GAATGC 1 cut(s) 777
MvaI CCWGG 2 cut(s) 1269, 1285
MvnI CGCG 1 cut(s) 646
MwoI GCNNNNNNNGC 5 cut(s) 481, 643, 727, 774, 920
NciI CCSGG 1 cut(s) 93
NdeII GATC 4 cut(s) 364, 819, 991, 1189
NlaIV GGNNCC 1 cut(s) 1368
NmuCI GTSAC 2 cut(s) 16, 332
NsbI TGCGCA 2 cut(s) 149, 1345
NspI RCATGY 1 cut(s) 691
NspV TTCGAA 1 cut(s) 781
PagI TCATGA 1 cut(s) 507
PctI GAATGC 1 cut(s) 777
PfeI GAWTC 1 cut(s) 1101
PflMI CCANNNNNTGG 1 cut(s) 1315
PfoI TCCNGGA 1 cut(s) 1267
PkrI GCNGC 5 cut(s) 256, 543, 659, 894, 925
PleI GAGTC 3 cut(s) 222, 319, 418
PpsI GAGTC 3 cut(s) 222, 319, 418
PpuMI RGGWCCY 1 cut(s) 563
PshAI GACNNNNGTC 1 cut(s) 616
Psp5II RGGWCCY 1 cut(s) 563
Psp6I CCWGG 2 cut(s) 1267, 1283
PspEI GGTNACC 1 cut(s) 332
PspGI CCWGG 2 cut(s) 1267, 1283
PspN4I GGNNCC 1 cut(s) 1368
PspPI GGNCC 2 cut(s) 197, 563
PspPPI RGGWCCY 1 cut(s) 563
PstI CTGCAG 2 cut(s) 163, 659
PsuI RGATCY 2 cut(s) 819, 991
RsaI GTAC 2 cut(s) 1010, 1380
RsaNI GTAC 2 cut(s) 1009, 1379
RseI CAYNNNNRTG 1 cut(s) 1261
SaqAI TTAA 3 cut(s) 630, 693, 806
SatI GCNGC 5 cut(s) 255, 542, 658, 893, 924
Sau3AI GATC 4 cut(s) 364, 819, 991, 1189
Sau96I GGNCC 2 cut(s) 197, 563
SchI GAGTC 3 cut(s) 223, 320, 419
ScrFI CCNGG 3 cut(s) 93, 1269, 1285
SduI GDGCHC 1 cut(s) 98
SfaNI GCATC 3 cut(s) 466, 669, 708
SfcI CTRYAG 4 cut(s) 159, 655, 1228, 1398
SfuI TTCGAA 1 cut(s) 781
SinI GGWCC 2 cut(s) 197, 563
SmiMI CAYNNNNRTG 1 cut(s) 1261
SmlI CTYRAG 5 cut(s) 461, 692, 725, 1113, 1386
SmoI CTYRAG 5 cut(s) 461, 692, 725, 1113, 1386
Sse9I AATT 6 cut(s) 434, 469, 702, 803, 1032, 1325
SsiI CCGC 1 cut(s) 892
SspI AATATT 1 cut(s) 1128
SspMI CTAG 2 cut(s) 899, 954
StyD4I CCNGG 3 cut(s) 91, 1267, 1283
StyI CCWWGG 2 cut(s) 127, 1412
TaaI ACNGT 3 cut(s) 235, 496, 615
TaiI ACGT 1 cut(s) 524
TaqI TCGA 6 cut(s) 77, 139, 319, 781, 1188, 1203
TasI AATT 6 cut(s) 434, 469, 702, 803, 1032, 1325
TatI WGTACW 1 cut(s) 1008
TauI GCSGC 1 cut(s) 895
TfiI GAWTC 1 cut(s) 1101
Tru1I TTAA 3 cut(s) 630, 693, 806
Tru9I TTAA 3 cut(s) 630, 693, 806
TscAI CASTG 1 cut(s) 163
TseFI GTSAC 2 cut(s) 16, 332
TseI GCWGC 4 cut(s) 254, 541, 657, 923
Tsp45I GTSAC 2 cut(s) 16, 332
TspDTI ATGAA 9 cut(s) 17, 229, 233, 524, 810, 855, 921, 1019, 1094
TspRI CASTG 1 cut(s) 163
Van91I CCANNNNNTGG 1 cut(s) 1315
Vha464I CTTAAG 1 cut(s) 692
VpaK11BI GGWCC 2 cut(s) 197, 563
XapI RAATTY 1 cut(s) 1032
XceI RCATGY 1 cut(s) 691
XmiI GTMKAC 1 cut(s) 314
XspI CTAG 2 cut(s) 899, 954
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.