Prupe.6G041300_v2.0.a1

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000704
Physical Location & Seq
Reverse (-)
3056436 .. 3058864
2429 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G041300.2

Sequence Viewer

Length: 1440 bp
ATGGCTTTCAATTTCATTCTAGTAATTGCAATCACTTTGATCGTAGCTTTCTTCCTTTCAAAATTTATGTTCAAGGGTCAGACCAAAAATCTGCCAAAAGGGTCTCTCGGATATCCCCTAATAGGAGAGACATTTAGCTTTCTGCGAGCACAGAAACAAGATCGAGGCCCCGAATGGCTGGAAGAGAGAACATCAAAGCATGGACCAGTGTTCAAAACCTCCTTGATGGGTTCCCCAACTGTGGTTGCTGTAGGTCAAGCAGGCAACAAGTTTGTATTGGGCACTGAAGAAGATGTTCTTTCTGCCAAGAAACCAGTCGCCCTAGTAGCCATTGCTGGAAAACAAAATATATTTGAGCTCACAGGGTCAAGGTACAGATTGGTAAAGGGAGCAATGGTGAGCTTCTTAAAGCCTGAAAGTCTTCAGAACTATATCAAACAGATGGATGAATTGACCAAGATCATGTTACTAAGAGAAACAGAAAACAAAGACACCATAAAAGCTGTGGTCACCATGAAGAAACTTACATTCAACATAGCATCCAGCATACTTTTTGGCATCAAGGATGAGCACACTAGGGAGGTTTTGTTTGATGATTTTTCTTTAGCCTTCAAAGCAGGTTGGTCTGTTCCTATTAACTTCCCTGGCACTGTTTACTGGAGGGGCCTAAGAGCCAGGTCAAGGATTGTCAGTAGGATTTTGCCAATACTCAAGGAAAGAAGGGAGGAGATTTTACAGGGGAAACTGAGCCCTACAAGCAATGTGTTCTCTTGCTTGTTAGCATTAAGAGATGAAAATGAACAGCCAATTTCTGATGATCTGATCTTGGACAATTATGTCACATTGATGATAGCTAGTCATGACACTTCTGCCACACTTATGAGCCTTATGATATGGAAGCTGTCTACAGACTCTGAGATCTACAAGAAAGTTTTAGATGAACAAATGGACATTTTAAGGAAGAGGGAGGAGGGAGCAGAAGATAGGCTAACATGGGCTGAGATACAAAAGATGAAATACACATGGAGAGTTGCACAAGAGTTGATGAGGATCATCCCTCCTGTGTTTGGCAGCTTCAGAAAAGCACTTAAAGACACTGAATATGGTGGCTATGACATTCCCAAAGGATGGCAGGTGTATTGTGTGTCTCATGGAACACACATGAACAAAGAGATATTTGAGAAGCCCACAGAGTTTGATCCATCAAGATTTGAGAACCCATCAAAGCCAATCCCTCCCTATGCTTATATTCCATTTGGAGGAGGCCTGCACACTTGCATAGGCAATGAGTTTGCAAGAGTGGAAGTACTCACCACCATCCACAACTTGGTGACAATGTTTGAGTGGTCTCAGGTGTTCCCTGATGAAATAATCACGAGGCAACCAATGCCATATCCATCCATGGGCCTTCCAATCAAGATCAGACCAAGAAAGCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

480

Amino Acids

54.64

Weight (kDa)

9.15

Isoelectric Point (pI)

39.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1123
AasI GACNNNNNNGTC 1 cut(s) 836
Acc36I ACCTGC 2 cut(s) 608, 1123
AccB7I CCANNNNNTGG 2 cut(s) 1128, 1327
AccI GTMKAC 1 cut(s) 905
AclWI GGATC 2 cut(s) 1058, 1193
AcsI RAATTY 1 cut(s) 62
AcuI CTGAAG 3 cut(s) 306, 407, 1060
AfaI GTAC 2 cut(s) 374, 1308
AfiI CCNNNNNNNGG 8 cut(s) 122, 241, 681, 1067, 1128, 1259, 1327, 1403
AgsI TTSAA 6 cut(s) 10, 60, 73, 214, 532, 613
AjnI CCWGG 2 cut(s) 643, 674
AluBI AGCT 9 cut(s) 47, 138, 358, 402, 503, 854, 901, 1074, 1435
AluI AGCT 9 cut(s) 47, 138, 358, 402, 503, 854, 901, 1074, 1435
Alw21I GWGCWC 3 cut(s) 151, 360, 573
Alw26I GTCTC 4 cut(s) 108, 122, 1152, 1353
AlwI GGATC 2 cut(s) 1058, 1193
AlwNI CAGNNNCTG 1 cut(s) 914
AoxI GGCC 4 cut(s) 166, 664, 1264, 1405
ApeKI GCWGC 1 cut(s) 1071
ApoI RAATTY 1 cut(s) 62
Asp700I GAANNNNTTC 2 cut(s) 294, 420
AspS9I GGNCC 4 cut(s) 167, 203, 664, 1405
AsuHPI GGTGA 4 cut(s) 409, 502, 1303, 1342
AvaII GGWCC 1 cut(s) 203
BaeGI GKGCMC 1 cut(s) 284
BanII GRGCYC 2 cut(s) 360, 752
BauI CACGAG 1 cut(s) 1375
BbsI GAAGAC 1 cut(s) 413
Bbv12I GWGCWC 3 cut(s) 151, 360, 573
BbvI GCAGC 1 cut(s) 1083
BccI CCATC 7 cut(s) 220, 436, 1122, 1210, 1228, 1325, 1405
BciT130I CCWGG 2 cut(s) 645, 676
BcoDI GTCTC 4 cut(s) 108, 122, 1152, 1353
BfaI CTAG 4 cut(s) 20, 323, 576, 855
BfmI CTRYAG 2 cut(s) 249, 906
BfuAI ACCTGC 2 cut(s) 608, 1123
BglII AGATCT 1 cut(s) 918
BisI GCNGC 1 cut(s) 1072
BlsI GCNGC 1 cut(s) 1073
BmcAI AGTACT 1 cut(s) 1308
Bme1390I CCNGG 2 cut(s) 645, 676
Bme18I GGWCC 1 cut(s) 203
BmgT120I GGNCC 4 cut(s) 167, 203, 664, 1405
BmiI GGNNCC 3 cut(s) 169, 232, 665
BmrFI CCNGG 2 cut(s) 645, 676
BmsI GCATC 2 cut(s) 548, 567
BpiI GAAGAC 1 cut(s) 413
BpmI CTGGAG 1 cut(s) 679
BpuEI CTTGAG 1 cut(s) 695
BsaBI GATNNNNATC 1 cut(s) 1049
BsaI GGTCTC 2 cut(s) 108, 1353
BsaJI CCNNGG 2 cut(s) 643, 1401
BsaXI ACNNNNNCTCC 4 cut(s) 381, 411, 572, 602
Bsc4I CCNNNNNNNGG 8 cut(s) 122, 241, 681, 1067, 1128, 1259, 1327, 1403
Bse1I ACTGG 3 cut(s) 206, 314, 662
Bse3DI GCAATG 4 cut(s) 330, 399, 766, 1291
Bse8I GATNNNNATC 1 cut(s) 1049
BseBI CCWGG 2 cut(s) 645, 676
BseDI CCNNGG 2 cut(s) 643, 1401
BseGI GGATG 7 cut(s) 451, 539, 571, 1053, 1133, 1317, 1397
BseJI GATNNNNATC 1 cut(s) 1049
BseLI CCNNNNNNNGG 8 cut(s) 122, 241, 681, 1067, 1128, 1259, 1327, 1403
BseMI GCAATG 4 cut(s) 330, 399, 766, 1291
BseMII CTCAG 4 cut(s) 737, 906, 990, 1364
BseNI ACTGG 3 cut(s) 206, 314, 662
BseRI GAGGAG 3 cut(s) 740, 983, 1275
BseSI GKGCMC 1 cut(s) 284
BseXI GCAGC 1 cut(s) 1083
BsgI GTGCAG 1 cut(s) 1253
BshFI GGCC 4 cut(s) 168, 666, 1266, 1407
BsiHKAI GWGCWC 3 cut(s) 151, 360, 573
BslI CCNNNNNNNGG 8 cut(s) 122, 241, 681, 1067, 1128, 1259, 1327, 1403
BsmAI GTCTC 4 cut(s) 108, 122, 1152, 1353
BsnI GGCC 4 cut(s) 168, 666, 1266, 1407
Bso31I GGTCTC 2 cut(s) 108, 1353
Bsp1286I GDGCHC 5 cut(s) 151, 284, 360, 573, 752
Bsp143I GATC 9 cut(s) 39, 160, 459, 817, 822, 918, 1050, 1198, 1419
Bsp19I CCATGG 1 cut(s) 1401
BspANI GGCC 4 cut(s) 168, 666, 1266, 1407
BspCNI CTCAG 4 cut(s) 738, 907, 991, 1363
BspHI TCATGA 1 cut(s) 859
BspLI GGNNCC 3 cut(s) 169, 232, 665
BspMI ACCTGC 2 cut(s) 608, 1123
BspPI GGATC 2 cut(s) 1058, 1193
BspTNI GGTCTC 2 cut(s) 108, 1353
BsrDI GCAATG 4 cut(s) 330, 399, 766, 1291
BsrI ACTGG 3 cut(s) 206, 314, 662
BssECI CCNNGG 2 cut(s) 643, 1401
BssMI GATC 9 cut(s) 39, 160, 459, 817, 822, 918, 1050, 1198, 1419
BssSI CACGAG 1 cut(s) 1375
BssT1I CCWWGG 1 cut(s) 1401
Bst2BI CACGAG 1 cut(s) 1375
Bst2UI CCWGG 2 cut(s) 645, 676
Bst4CI ACNGT 2 cut(s) 241, 652
Bst6I CTCTTC 2 cut(s) 177, 956
BstAPI GCANNNNNTGC 1 cut(s) 1387
BstC8I GCNNGC 3 cut(s) 147, 262, 1268
BstDEI CTNAG 6 cut(s) 470, 668, 746, 915, 999, 1350
BstDSI CCRYGG 1 cut(s) 1401
BstEII GGTNACC 1 cut(s) 508
BstF5I GGATG 7 cut(s) 451, 539, 571, 1053, 1133, 1317, 1397
BstKTI GATC 9 cut(s) 42, 163, 462, 820, 825, 921, 1053, 1201, 1422
BstMAI GTCTC 4 cut(s) 108, 122, 1152, 1353
BstMBI GATC 9 cut(s) 39, 160, 459, 817, 822, 918, 1050, 1198, 1419
BstMWI GCNNNNNNNGC 4 cut(s) 326, 614, 756, 1387
BstNI CCWGG 2 cut(s) 645, 676
BstPI GGTNACC 1 cut(s) 508
BstSCI CCNGG 2 cut(s) 643, 674
BstSFI CTRYAG 2 cut(s) 249, 906
BstSLI GKGCMC 1 cut(s) 284
BstV1I GCAGC 1 cut(s) 1083
BstV2I GAAGAC 1 cut(s) 413
BstX2I RGATCY 1 cut(s) 918
BstYI RGATCY 1 cut(s) 918
BsuRI GGCC 4 cut(s) 168, 666, 1266, 1407
BtgI CCRYGG 1 cut(s) 1401
BtsCI GGATG 7 cut(s) 451, 539, 571, 1053, 1133, 1317, 1397
BtsIMutI CAGTG 4 cut(s) 213, 282, 648, 1095
BveI ACCTGC 2 cut(s) 608, 1123
Cac8I GCNNGC 3 cut(s) 147, 262, 1268
CaiI CAGNNNCTG 1 cut(s) 914
CciI TCATGA 1 cut(s) 859
Cfr13I GGNCC 4 cut(s) 167, 203, 664, 1405
Csp6I GTAC 2 cut(s) 373, 1307
CspCI CAANNNNNGTGG 2 cut(s) 1177, 1212
CviAII CATG 9 cut(s) 200, 463, 514, 860, 993, 1023, 1151, 1162, 1402
CviQI GTAC 2 cut(s) 373, 1307
DdeI CTNAG 6 cut(s) 470, 668, 746, 915, 999, 1350
DpnI GATC 9 cut(s) 41, 162, 461, 819, 824, 920, 1052, 1200, 1421
DpnII GATC 9 cut(s) 39, 160, 459, 817, 822, 918, 1050, 1198, 1419
DrdI GACNNNNNNGTC 1 cut(s) 836
DseDI GACNNNNNNGTC 1 cut(s) 836
Eam1104I CTCTTC 2 cut(s) 177, 956
EarI CTCTTC 2 cut(s) 177, 956
Ecl136II GAGCTC 1 cut(s) 358
Eco130I CCWWGG 1 cut(s) 1401
Eco147I AGGCCT 1 cut(s) 1266
Eco24I GRGCYC 2 cut(s) 360, 752
Eco31I GGTCTC 2 cut(s) 108, 1353
Eco32I GATATC 1 cut(s) 113
Eco47I GGWCC 1 cut(s) 203
Eco53kI GAGCTC 1 cut(s) 358
Eco57I CTGAAG 3 cut(s) 306, 407, 1060
Eco91I GGTNACC 1 cut(s) 508
EcoICRI GAGCTC 1 cut(s) 358
EcoO109I RGGNCCY 2 cut(s) 167, 664
EcoO65I GGTNACC 1 cut(s) 508
EcoRII CCWGG 2 cut(s) 643, 674
EcoRV GATATC 1 cut(s) 113
EcoT14I CCWWGG 1 cut(s) 1401
EcoT38I GRGCYC 2 cut(s) 360, 752
ErhI CCWWGG 1 cut(s) 1401
FaeI CATG 9 cut(s) 203, 466, 517, 863, 996, 1026, 1154, 1165, 1405
FalI AAGNNNNNCTT 2 cut(s) 282, 314
FatI CATG 9 cut(s) 199, 462, 513, 859, 992, 1022, 1150, 1161, 1401
FblI GTMKAC 1 cut(s) 905
Fnu4HI GCNGC 1 cut(s) 1072
FokI GGATG 7 cut(s) 458, 526, 578, 1040, 1140, 1304, 1384
FriOI GRGCYC 2 cut(s) 360, 752
Fsp4HI GCNGC 1 cut(s) 1072
FspBI CTAG 4 cut(s) 20, 323, 576, 855
GluI GCNGC 1 cut(s) 1072
GsuI CTGGAG 1 cut(s) 679
HaeIII GGCC 4 cut(s) 168, 666, 1266, 1407
Hin1II CATG 9 cut(s) 203, 466, 517, 863, 996, 1026, 1154, 1165, 1405
HindIII AAGCTT 1 cut(s) 1433
HinfI GANTC 1 cut(s) 911
HphI GGTGA 4 cut(s) 409, 502, 1303, 1342
Hpy166II GTNNAC 2 cut(s) 655, 906
Hpy188I TCNGA 8 cut(s) 81, 110, 426, 814, 822, 916, 1079, 1424
Hpy188III TCNNGA 4 cut(s) 860, 1206, 1375, 1417
Hpy8I GTNNAC 2 cut(s) 655, 906
HpyAV CCTTC 3 cut(s) 619, 714, 1418
HpyCH4III ACNGT 2 cut(s) 241, 652
HpyCH4V TGCA 5 cut(s) 29, 1034, 1270, 1278, 1295
HpyF10VI GCNNNNNNNGC 4 cut(s) 326, 614, 756, 1387
HpyF3I CTNAG 6 cut(s) 470, 668, 746, 915, 999, 1350
Hsp92II CATG 9 cut(s) 203, 466, 517, 863, 996, 1026, 1154, 1165, 1405
Kzo9I GATC 9 cut(s) 39, 160, 459, 817, 822, 918, 1050, 1198, 1419
LmnI GCTCC 2 cut(s) 389, 974
Lsp1109I GCAGC 1 cut(s) 1083
LweI GCATC 2 cut(s) 548, 567
MaeI CTAG 4 cut(s) 20, 323, 576, 855
MaeIII GTNAC 4 cut(s) 465, 508, 838, 1330
MalI GATC 9 cut(s) 41, 162, 461, 819, 824, 920, 1052, 1200, 1421
MboI GATC 9 cut(s) 39, 160, 459, 817, 822, 918, 1050, 1198, 1419
MboII GAAGA 8 cut(s) 43, 194, 299, 302, 413, 529, 973, 992
MflI RGATCY 1 cut(s) 918
MhlI GDGCHC 5 cut(s) 151, 284, 360, 573, 752
MluCI AATT 6 cut(s) 10, 24, 62, 449, 807, 832
MlyI GAGTC 1 cut(s) 905
MroXI GAANNNNTTC 2 cut(s) 294, 420
MseI TTAA 6 cut(s) 407, 636, 785, 956, 1089, 1438
MslI CAYNNNNRTG 2 cut(s) 845, 878
MspR9I CCNGG 2 cut(s) 645, 676
MvaI CCWGG 2 cut(s) 645, 676
MwoI GCNNNNNNNGC 4 cut(s) 326, 614, 756, 1387
NcoI CCATGG 1 cut(s) 1401
NdeII GATC 9 cut(s) 39, 160, 459, 817, 822, 918, 1050, 1198, 1419
NlaIII CATG 9 cut(s) 203, 466, 517, 863, 996, 1026, 1154, 1165, 1405
NlaIV GGNNCC 3 cut(s) 169, 232, 665
NmuCI GTSAC 3 cut(s) 508, 838, 1330
PagI TCATGA 1 cut(s) 859
PaqCI CACCTGC 1 cut(s) 1123
PceI AGGCCT 1 cut(s) 1266
PdmI GAANNNNTTC 2 cut(s) 294, 420
PflMI CCANNNNNTGG 2 cut(s) 1128, 1327
PkrI GCNGC 1 cut(s) 1073
PleI GAGTC 1 cut(s) 905
PpsI GAGTC 1 cut(s) 905
Psp124BI GAGCTC 1 cut(s) 360
Psp6I CCWGG 2 cut(s) 643, 674
PspEI GGTNACC 1 cut(s) 508
PspGI CCWGG 2 cut(s) 643, 674
PspN4I GGNNCC 3 cut(s) 169, 232, 665
PspPI GGNCC 4 cut(s) 167, 203, 664, 1405
PstNI CAGNNNCTG 1 cut(s) 914
PsuI RGATCY 1 cut(s) 918
RsaI GTAC 2 cut(s) 374, 1308
RsaNI GTAC 2 cut(s) 373, 1307
RseI CAYNNNNRTG 2 cut(s) 845, 878
SacI GAGCTC 1 cut(s) 360
SaqAI TTAA 6 cut(s) 407, 636, 785, 956, 1089, 1438
SatI GCNGC 1 cut(s) 1072
Sau3AI GATC 9 cut(s) 39, 160, 459, 817, 822, 918, 1050, 1198, 1419
Sau96I GGNCC 4 cut(s) 167, 203, 664, 1405
ScaI AGTACT 1 cut(s) 1308
SchI GAGTC 1 cut(s) 905
ScrFI CCNGG 2 cut(s) 645, 676
SduI GDGCHC 5 cut(s) 151, 284, 360, 573, 752
SfaNI GCATC 2 cut(s) 548, 567
SfcI CTRYAG 2 cut(s) 249, 906
SinI GGWCC 1 cut(s) 203
SmiMI CAYNNNNRTG 2 cut(s) 845, 878
SmlI CTYRAG 1 cut(s) 710
SmoI CTYRAG 1 cut(s) 710
Sse9I AATT 6 cut(s) 10, 24, 62, 449, 807, 832
SseBI AGGCCT 1 cut(s) 1266
SspMI CTAG 4 cut(s) 20, 323, 576, 855
SstI GAGCTC 1 cut(s) 360
StuI AGGCCT 1 cut(s) 1266
StyD4I CCNGG 2 cut(s) 643, 674
StyI CCWWGG 1 cut(s) 1401
TaaI ACNGT 2 cut(s) 241, 652
TaqI TCGA 1 cut(s) 163
TasI AATT 6 cut(s) 10, 24, 62, 449, 807, 832
TatI WGTACW 1 cut(s) 1306
Tru1I TTAA 6 cut(s) 407, 636, 785, 956, 1089, 1438
Tru9I TTAA 6 cut(s) 407, 636, 785, 956, 1089, 1438
TscAI CASTG 4 cut(s) 213, 289, 655, 1102
TseFI GTSAC 3 cut(s) 508, 838, 1330
TseI GCWGC 1 cut(s) 1071
Tsp45I GTSAC 3 cut(s) 508, 838, 1330
TspDTI ATGAA 9 cut(s) 4, 462, 530, 807, 813, 954, 1028, 1178, 1380
TspRI CASTG 4 cut(s) 213, 289, 655, 1102
Van91I CCANNNNNTGG 2 cut(s) 1128, 1327
VpaK11BI GGWCC 1 cut(s) 203
XapI RAATTY 1 cut(s) 62
XcmI CCANNNNNNNNNTGG 2 cut(s) 502, 1324
XmiI GTMKAC 1 cut(s) 905
XmnI GAANNNNTTC 2 cut(s) 294, 420
XspI CTAG 4 cut(s) 20, 323, 576, 855
ZrmI AGTACT 1 cut(s) 1308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.