Rh5DG517800

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
80477405 .. 80478272
868 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG517800.1

Sequence Viewer

Length: 348 bp
ATGGGTTCCCCAACTGTGATTGTTATAGGTCAAGCAGGGAACAAGTTTATACTTGGTGCTGAAGATGATGTTCTTGCTGCCAAACAACCTCCCACCTTGTTAGCCATTGGAGGAAAACATAGTATATTTGAACTTACAGGATCAAGGTACAGGTTGGTAAAGGGAGCAATGGTGAGCTTCTTGAAGCCTGAAAGTCTTCAAAACTACATCAACCAGATGGACAAATTAATCAAGACCATGTTACTAAAAGAAACAGAAAACAAAGACACCATAAAGGCTGTGGTCACCATGAAGAAGCTTTCATTTAACATAGCATCAATTGGTCCTGATAAACAGAAATGCAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

115

Amino Acids

12.56

Weight (kDa)

9.64

Isoelectric Point (pI)

25.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 148
AcuI CTGAAG 1 cut(s) 81
AfaI GTAC 1 cut(s) 149
AgsI TTSAA 3 cut(s) 131, 184, 200
AluBI AGCT 2 cut(s) 177, 298
AluI AGCT 2 cut(s) 177, 298
AlwI GGATC 1 cut(s) 148
ApeKI GCWGC 1 cut(s) 77
AseI ATTAAT 1 cut(s) 227
Asp700I GAANNNNTTC 1 cut(s) 195
AspS9I GGNCC 1 cut(s) 323
AsuHPI GGTGA 2 cut(s) 184, 277
AvaII GGWCC 1 cut(s) 323
BbsI GAAGAC 1 cut(s) 188
BbvI GCAGC 1 cut(s) 64
BccI CCATC 1 cut(s) 211
BisI GCNGC 1 cut(s) 78
BlsI GCNGC 1 cut(s) 79
Bme18I GGWCC 1 cut(s) 323
BmgT120I GGNCC 1 cut(s) 323
BmiI GGNNCC 1 cut(s) 7
BmsI GCATC 1 cut(s) 323
BpiI GAAGAC 1 cut(s) 188
BsaXI ACNNNNNCTCC 2 cut(s) 156, 186
Bse3DI GCAATG 1 cut(s) 174
BseMI GCAATG 1 cut(s) 174
BseXI GCAGC 1 cut(s) 64
Bsp143I GATC 1 cut(s) 140
BspLI GGNNCC 1 cut(s) 7
BspPI GGATC 1 cut(s) 148
BsrDI GCAATG 1 cut(s) 174
BssMI GATC 1 cut(s) 140
Bst4CI ACNGT 1 cut(s) 16
BstEII GGTNACC 1 cut(s) 283
BstKTI GATC 1 cut(s) 143
BstMBI GATC 1 cut(s) 140
BstPI GGTNACC 1 cut(s) 283
BstV1I GCAGC 1 cut(s) 64
BstV2I GAAGAC 1 cut(s) 188
Cfr13I GGNCC 1 cut(s) 323
Csp6I GTAC 1 cut(s) 148
CviAII CATG 2 cut(s) 238, 289
CviJI RGCY 5 cut(s) 104, 177, 187, 278, 298
CviKI_1 RGCY 5 cut(s) 104, 177, 187, 278, 298
CviQI GTAC 1 cut(s) 148
DpnI GATC 1 cut(s) 142
DpnII GATC 1 cut(s) 140
Eco47I GGWCC 1 cut(s) 323
Eco57I CTGAAG 1 cut(s) 81
Eco91I GGTNACC 1 cut(s) 283
EcoO65I GGTNACC 1 cut(s) 283
FaeI CATG 2 cut(s) 241, 292
FaiI YATR 8 cut(s) 26, 50, 120, 125, 239, 272, 290, 311
FatI CATG 2 cut(s) 237, 288
Fnu4HI GCNGC 1 cut(s) 78
Fsp4HI GCNGC 1 cut(s) 78
GluI GCNGC 1 cut(s) 78
Hin1II CATG 2 cut(s) 241, 292
HindIII AAGCTT 1 cut(s) 296
HphI GGTGA 2 cut(s) 184, 277
Hpy188III TCNNGA 3 cut(s) 181, 232, 326
HpyCH4III ACNGT 1 cut(s) 16
HpyCH4V TGCA 1 cut(s) 342
Hsp92II CATG 2 cut(s) 241, 292
Kzo9I GATC 1 cut(s) 140
LmnI GCTCC 1 cut(s) 164
LpnPI CCDG 6 cut(s) 21, 123, 136, 201, 227, 339
Lsp1109I GCAGC 1 cut(s) 64
LweI GCATC 1 cut(s) 323
MaeIII GTNAC 2 cut(s) 240, 283
MalI GATC 1 cut(s) 142
MboI GATC 1 cut(s) 140
MboII GAAGA 3 cut(s) 74, 188, 304
MfeI CAATTG 1 cut(s) 318
MluCI AATT 2 cut(s) 224, 318
MnlI CCTC 2 cut(s) 99, 104
MroXI GAANNNNTTC 1 cut(s) 195
MseI TTAA 2 cut(s) 227, 306
MunI CAATTG 1 cut(s) 318
NdeII GATC 1 cut(s) 140
NlaIII CATG 2 cut(s) 241, 292
NlaIV GGNNCC 1 cut(s) 7
NmuCI GTSAC 1 cut(s) 283
PdmI GAANNNNTTC 1 cut(s) 195
PkrI GCNGC 1 cut(s) 79
PshBI ATTAAT 1 cut(s) 227
PspEI GGTNACC 1 cut(s) 283
PspN4I GGNNCC 1 cut(s) 7
PspPI GGNCC 1 cut(s) 323
RsaI GTAC 1 cut(s) 149
RsaNI GTAC 1 cut(s) 148
SaqAI TTAA 2 cut(s) 227, 306
SatI GCNGC 1 cut(s) 78
Sau3AI GATC 1 cut(s) 140
Sau96I GGNCC 1 cut(s) 323
SetI ASST 7 cut(s) 31, 91, 98, 149, 155, 179, 300
SfaNI GCATC 1 cut(s) 323
SinI GGWCC 1 cut(s) 323
Sse9I AATT 2 cut(s) 224, 318
TaaI ACNGT 1 cut(s) 16
TasI AATT 2 cut(s) 224, 318
Tru1I TTAA 2 cut(s) 227, 306
Tru9I TTAA 2 cut(s) 227, 306
TseFI GTSAC 1 cut(s) 283
TseI GCWGC 1 cut(s) 77
Tsp45I GTSAC 1 cut(s) 283
TspDTI ATGAA 2 cut(s) 291, 305
VpaK11BI GGWCC 1 cut(s) 323
VspI ATTAAT 1 cut(s) 227
XcmI CCANNNNNNNNNTGG 1 cut(s) 277
XmnI GAANNNNTTC 1 cut(s) 195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.