transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 111 |
| AdeI | CACNNNGTG | 2 cut(s) | 86, 88 |
| AfaI | GTAC | 1 cut(s) | 296 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 55, 266 |
| AgsI | TTSAA | 3 cut(s) | 64, 212, 278 |
| AjnI | CCWGG | 1 cut(s) | 265 |
| AluBI | AGCT | 3 cut(s) | 77, 184, 227 |
| AluI | AGCT | 3 cut(s) | 77, 184, 227 |
| AoxI | GGCC | 1 cut(s) | 57 |
| ApeKI | GCWGC | 3 cut(s) | 71, 74, 77 |
| AsuHPI | GGTGA | 1 cut(s) | 142 |
| BbvI | GCAGC | 3 cut(s) | 58, 64, 86 |
| BccI | CCATC | 1 cut(s) | 134 |
| BciT130I | CCWGG | 1 cut(s) | 267 |
| BfmI | CTRYAG | 1 cut(s) | 72 |
| BisI | GCNGC | 3 cut(s) | 72, 75, 78 |
| BlsI | GCNGC | 3 cut(s) | 73, 76, 79 |
| Bme1390I | CCNGG | 1 cut(s) | 267 |
| BmrFI | CCNGG | 1 cut(s) | 267 |
| BoxI | GACNNNNGTC | 1 cut(s) | 117 |
| BsaBI | GATNNNNATC | 1 cut(s) | 315 |
| BsaJI | CCNNGG | 2 cut(s) | 54, 265 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 129, 159 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 55, 266 |
| Bse1I | ACTGG | 3 cut(s) | 165, 309, 326 |
| Bse8I | GATNNNNATC | 1 cut(s) | 315 |
| BseBI | CCWGG | 1 cut(s) | 267 |
| BseDI | CCNNGG | 2 cut(s) | 54, 265 |
| BseJI | GATNNNNATC | 1 cut(s) | 315 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 55, 266 |
| BseNI | ACTGG | 3 cut(s) | 165, 309, 326 |
| BseXI | GCAGC | 3 cut(s) | 58, 64, 86 |
| BsgI | GTGCAG | 1 cut(s) | 63 |
| Bsh1285I | CGRYCG | 1 cut(s) | 105 |
| BshFI | GGCC | 1 cut(s) | 59 |
| BsiEI | CGRYCG | 1 cut(s) | 105 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 55, 266 |
| BsnI | GGCC | 1 cut(s) | 59 |
| Bsp143I | GATC | 1 cut(s) | 102 |
| BspANI | GGCC | 1 cut(s) | 59 |
| BspMAI | CTGCAG | 1 cut(s) | 76 |
| BsrI | ACTGG | 3 cut(s) | 165, 309, 326 |
| BssECI | CCNNGG | 2 cut(s) | 54, 265 |
| BssMI | GATC | 1 cut(s) | 102 |
| BssT1I | CCWWGG | 1 cut(s) | 54 |
| Bst2UI | CCWGG | 1 cut(s) | 267 |
| Bst4CI | ACNGT | 2 cut(s) | 38, 86 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 264 |
| BstKTI | GATC | 1 cut(s) | 105 |
| BstMBI | GATC | 1 cut(s) | 102 |
| BstMCI | CGRYCG | 1 cut(s) | 105 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 77 |
| BstNI | CCWGG | 1 cut(s) | 267 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 117 |
| BstSCI | CCNGG | 1 cut(s) | 265 |
| BstSFI | CTRYAG | 1 cut(s) | 72 |
| BstV1I | GCAGC | 3 cut(s) | 58, 64, 86 |
| BsuRI | GGCC | 1 cut(s) | 59 |
| BtsIMutI | CAGTG | 1 cut(s) | 34 |
| Csp6I | GTAC | 1 cut(s) | 295 |
| CviJI | RGCY | 6 cut(s) | 59, 77, 184, 189, 227, 270 |
| CviKI_1 | RGCY | 6 cut(s) | 59, 77, 184, 189, 227, 270 |
| CviQI | GTAC | 1 cut(s) | 295 |
| DpnI | GATC | 1 cut(s) | 104 |
| DpnII | GATC | 1 cut(s) | 102 |
| DraIII | CACNNNGTG | 2 cut(s) | 86, 88 |
| Eco130I | CCWWGG | 1 cut(s) | 54 |
| Eco147I | AGGCCT | 1 cut(s) | 59 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 264 |
| EcoRII | CCWGG | 1 cut(s) | 265 |
| EcoT14I | CCWWGG | 1 cut(s) | 54 |
| ErhI | CCWWGG | 1 cut(s) | 54 |
| FaiI | YATR | 4 cut(s) | 123, 125, 300, 344 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 173, 205 |
| FauNDI | CATATG | 1 cut(s) | 123 |
| FblI | GTMKAC | 1 cut(s) | 111 |
| Fnu4HI | GCNGC | 3 cut(s) | 72, 75, 78 |
| Fsp4HI | GCNGC | 3 cut(s) | 72, 75, 78 |
| GluI | GCNGC | 3 cut(s) | 72, 75, 78 |
| HaeIII | GGCC | 1 cut(s) | 59 |
| HincII | GTYRAC | 1 cut(s) | 148 |
| HindII | GTYRAC | 1 cut(s) | 148 |
| HindIII | AAGCTT | 1 cut(s) | 182 |
| HinfI | GANTC | 1 cut(s) | 149 |
| HphI | GGTGA | 1 cut(s) | 142 |
| Hpy166II | GTNNAC | 3 cut(s) | 91, 112, 148 |
| Hpy188III | TCNNGA | 1 cut(s) | 320 |
| Hpy8I | GTNNAC | 3 cut(s) | 91, 112, 148 |
| HpyCH4III | ACNGT | 2 cut(s) | 38, 86 |
| HpyCH4V | TGCA | 3 cut(s) | 34, 74, 80 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 77 |
| Kzo9I | GATC | 1 cut(s) | 102 |
| LmnI | GCTCC | 1 cut(s) | 224 |
| LpnPI | CCDG | 6 cut(s) | 178, 252, 279, 290, 333, 339 |
| Lsp1109I | GCAGC | 3 cut(s) | 58, 64, 86 |
| MaeIII | GTNAC | 1 cut(s) | 38 |
| MalI | GATC | 1 cut(s) | 104 |
| MboI | GATC | 1 cut(s) | 102 |
| MboII | GAAGA | 3 cut(s) | 76, 190, 224 |
| MlyI | GAGTC | 1 cut(s) | 143 |
| MnlI | CCTC | 4 cut(s) | 121, 238, 270, 297 |
| MseI | TTAA | 1 cut(s) | 173 |
| MspA1I | CMGCKG | 1 cut(s) | 77 |
| MspR9I | CCNGG | 1 cut(s) | 267 |
| MvaI | CCWGG | 1 cut(s) | 267 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 77 |
| NdeI | CATATG | 1 cut(s) | 123 |
| NdeII | GATC | 1 cut(s) | 102 |
| NmuCI | GTSAC | 1 cut(s) | 38 |
| PceI | AGGCCT | 1 cut(s) | 59 |
| PkrI | GCNGC | 3 cut(s) | 73, 76, 79 |
| Ple19I | CGATCG | 1 cut(s) | 105 |
| PleI | GAGTC | 1 cut(s) | 143 |
| PpsI | GAGTC | 1 cut(s) | 143 |
| PshAI | GACNNNNGTC | 1 cut(s) | 117 |
| Psp6I | CCWGG | 1 cut(s) | 265 |
| PspGI | CCWGG | 1 cut(s) | 265 |
| PstI | CTGCAG | 1 cut(s) | 76 |
| PvuI | CGATCG | 1 cut(s) | 105 |
| PvuII | CAGCTG | 1 cut(s) | 77 |
| RsaI | GTAC | 1 cut(s) | 296 |
| RsaNI | GTAC | 1 cut(s) | 295 |
| SaqAI | TTAA | 1 cut(s) | 173 |
| SatI | GCNGC | 3 cut(s) | 72, 75, 78 |
| Sau3AI | GATC | 1 cut(s) | 102 |
| SchI | GAGTC | 1 cut(s) | 143 |
| ScrFI | CCNGG | 1 cut(s) | 267 |
| SetI | ASST | 5 cut(s) | 79, 121, 132, 186, 229 |
| SfcI | CTRYAG | 1 cut(s) | 72 |
| SseBI | AGGCCT | 1 cut(s) | 59 |
| SspI | AATATT | 1 cut(s) | 281 |
| StuI | AGGCCT | 1 cut(s) | 59 |
| StyD4I | CCNGG | 1 cut(s) | 265 |
| StyI | CCWWGG | 1 cut(s) | 54 |
| TaaI | ACNGT | 2 cut(s) | 38, 86 |
| TaqI | TCGA | 2 cut(s) | 101, 105 |
| TatI | WGTACW | 1 cut(s) | 294 |
| Tru1I | TTAA | 1 cut(s) | 173 |
| Tru9I | TTAA | 1 cut(s) | 173 |
| TscAI | CASTG | 1 cut(s) | 41 |
| TseFI | GTSAC | 1 cut(s) | 38 |
| TseI | GCWGC | 3 cut(s) | 71, 74, 77 |
| Tsp45I | GTSAC | 1 cut(s) | 38 |
| TspDTI | ATGAA | 3 cut(s) | 17, 315, 327 |
| TspRI | CASTG | 1 cut(s) | 41 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 264 |
| XmiI | GTMKAC | 1 cut(s) | 111 |