DDE superfamily endonuclease
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 147 |
| AcsI | RAATTY | 3 cut(s) | 76, 136, 299 |
| AcuI | CTGAAG | 1 cut(s) | 173 |
| AfaI | GTAC | 2 cut(s) | 19, 440 |
| AgsI | TTSAA | 5 cut(s) | 38, 110, 142, 163, 346 |
| AluBI | AGCT | 4 cut(s) | 185, 233, 237, 335 |
| AluI | AGCT | 4 cut(s) | 185, 233, 237, 335 |
| Alw26I | GTCTC | 1 cut(s) | 93 |
| Ama87I | CYCGRG | 1 cut(s) | 96 |
| AoxI | GGCC | 1 cut(s) | 156 |
| ApoI | RAATTY | 3 cut(s) | 76, 136, 299 |
| AsuNHI | GCTAGC | 1 cut(s) | 233 |
| AvaI | CYCGRG | 1 cut(s) | 96 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 9, 42 |
| BccI | CCATC | 2 cut(s) | 185, 315 |
| BcoDI | GTCTC | 1 cut(s) | 93 |
| BfaI | CTAG | 2 cut(s) | 234, 432 |
| BmeT110I | CYCGRG | 1 cut(s) | 96 |
| BmsI | GCATC | 1 cut(s) | 349 |
| BmtI | GCTAGC | 1 cut(s) | 237 |
| BpmI | CTGGAG | 1 cut(s) | 201 |
| Bse3DI | GCAATG | 1 cut(s) | 216 |
| BseGI | GGATG | 1 cut(s) | 326 |
| BseMI | GCAATG | 1 cut(s) | 216 |
| BshFI | GGCC | 1 cut(s) | 158 |
| BsiHKCI | CYCGRG | 1 cut(s) | 96 |
| BsmAI | GTCTC | 1 cut(s) | 93 |
| BsnI | GGCC | 1 cut(s) | 158 |
| BsoBI | CYCGRG | 1 cut(s) | 96 |
| BspANI | GGCC | 1 cut(s) | 158 |
| BspHI | TCATGA | 1 cut(s) | 337 |
| BspOI | GCTAGC | 1 cut(s) | 237 |
| BsrDI | GCAATG | 1 cut(s) | 216 |
| Bst4CI | ACNGT | 3 cut(s) | 8, 114, 351 |
| BstC8I | GCNNGC | 1 cut(s) | 235 |
| BstF5I | GGATG | 1 cut(s) | 326 |
| BstMAI | GTCTC | 1 cut(s) | 93 |
| BsuRI | GGCC | 1 cut(s) | 158 |
| BtsCI | GGATG | 1 cut(s) | 326 |
| Cac8I | GCNNGC | 1 cut(s) | 235 |
| CciI | TCATGA | 1 cut(s) | 337 |
| Csp6I | GTAC | 2 cut(s) | 18, 439 |
| CviAII | CATG | 2 cut(s) | 251, 338 |
| CviJI | RGCY | 5 cut(s) | 158, 185, 233, 237, 335 |
| CviKI_1 | RGCY | 5 cut(s) | 158, 185, 233, 237, 335 |
| CviQI | GTAC | 2 cut(s) | 18, 439 |
| Eco147I | AGGCCT | 1 cut(s) | 158 |
| Eco57I | CTGAAG | 1 cut(s) | 173 |
| Eco88I | CYCGRG | 1 cut(s) | 96 |
| EcoRI | GAATTC | 1 cut(s) | 299 |
| FaeI | CATG | 2 cut(s) | 254, 341 |
| FaiI | YATR | 9 cut(s) | 201, 203, 252, 305, 339, 355, 357, 403, 444 |
| FatI | CATG | 2 cut(s) | 250, 337 |
| FokI | GGATG | 1 cut(s) | 333 |
| FspBI | CTAG | 2 cut(s) | 234, 432 |
| GsuI | CTGGAG | 1 cut(s) | 201 |
| HaeIII | GGCC | 1 cut(s) | 158 |
| Hin1II | CATG | 2 cut(s) | 254, 341 |
| HinfI | GANTC | 1 cut(s) | 222 |
| Hpy188I | TCNGA | 1 cut(s) | 153 |
| Hpy188III | TCNNGA | 4 cut(s) | 81, 98, 219, 338 |
| HpyAV | CCTTC | 1 cut(s) | 148 |
| HpyCH4III | ACNGT | 3 cut(s) | 8, 114, 351 |
| HpyCH4IV | ACGT | 2 cut(s) | 147, 437 |
| HpySE526I | ACGT | 2 cut(s) | 147, 437 |
| Hsp92II | CATG | 2 cut(s) | 254, 341 |
| LmnI | GCTCC | 1 cut(s) | 182 |
| LpnPI | CCDG | 4 cut(s) | 165, 204, 219, 405 |
| LweI | GCATC | 1 cut(s) | 349 |
| MaeI | CTAG | 2 cut(s) | 234, 432 |
| MaeII | ACGT | 2 cut(s) | 147, 437 |
| MaeIII | GTNAC | 2 cut(s) | 114, 284 |
| MboII | GAAGA | 1 cut(s) | 50 |
| MfeI | CAATTG | 1 cut(s) | 168 |
| MluCI | AATT | 5 cut(s) | 76, 136, 168, 244, 299 |
| MlyI | GAGTC | 1 cut(s) | 216 |
| MnlI | CCTC | 2 cut(s) | 319, 366 |
| MseI | TTAA | 2 cut(s) | 315, 384 |
| MunI | CAATTG | 1 cut(s) | 168 |
| NheI | GCTAGC | 1 cut(s) | 233 |
| NlaIII | CATG | 2 cut(s) | 254, 341 |
| NmuCI | GTSAC | 1 cut(s) | 114 |
| PaeR7I | CTCGAG | 1 cut(s) | 96 |
| PagI | TCATGA | 1 cut(s) | 337 |
| PceI | AGGCCT | 1 cut(s) | 158 |
| PleI | GAGTC | 1 cut(s) | 216 |
| PpsI | GAGTC | 1 cut(s) | 216 |
| Psp1406I | AACGTT | 1 cut(s) | 147 |
| RsaI | GTAC | 2 cut(s) | 19, 440 |
| RsaNI | GTAC | 2 cut(s) | 18, 439 |
| SaqAI | TTAA | 2 cut(s) | 315, 384 |
| SchI | GAGTC | 1 cut(s) | 216 |
| SetI | ASST | 6 cut(s) | 150, 187, 235, 239, 337, 440 |
| SfaNI | GCATC | 1 cut(s) | 349 |
| Sfr274I | CTCGAG | 1 cut(s) | 96 |
| SlaI | CTCGAG | 1 cut(s) | 96 |
| SmlI | CTYRAG | 1 cut(s) | 96 |
| SmoI | CTYRAG | 1 cut(s) | 96 |
| Sse9I | AATT | 5 cut(s) | 76, 136, 168, 244, 299 |
| SseBI | AGGCCT | 1 cut(s) | 158 |
| SspMI | CTAG | 2 cut(s) | 234, 432 |
| StuI | AGGCCT | 1 cut(s) | 158 |
| TaaI | ACNGT | 3 cut(s) | 8, 114, 351 |
| TaiI | ACGT | 2 cut(s) | 150, 440 |
| TaqI | TCGA | 3 cut(s) | 82, 97, 225 |
| TasI | AATT | 5 cut(s) | 76, 136, 168, 244, 299 |
| Tru1I | TTAA | 2 cut(s) | 315, 384 |
| Tru9I | TTAA | 2 cut(s) | 315, 384 |
| TseFI | GTSAC | 1 cut(s) | 114 |
| Tsp45I | GTSAC | 1 cut(s) | 114 |
| TspDTI | ATGAA | 5 cut(s) | 17, 292, 390, 396, 400 |
| TspGWI | ACGGA | 1 cut(s) | 333 |
| XapI | RAATTY | 3 cut(s) | 76, 136, 299 |
| XhoI | CTCGAG | 1 cut(s) | 96 |
| XspI | CTAG | 2 cut(s) | 234, 432 |