Rorug04G0114300
ERF Family

DDE superfamily endonuclease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000697
Physical Location & Seq
Reverse (-)
17968632 .. 17970782
2151 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0114300.1

Sequence Viewer

Length: 2151 bp
ATGTCCACTAAATCCCCTCCTCATCCCTTCATGTCTGATAAATCCCCCCCTCATCCCATCCTGTCCGATAAATCCCCCCCTCCTCAGATCCTGTCTGATCCCTCCACCACTTATCAACCTTCCGCCAGTTGTGGCGATCTCTTTCTTACCCTCAACCCTGACAGTTCTGTCTGTTTCGATGAAACTAAACTGGTTGGGTTTGTCATCTCTGATCGTTCTCTTAATGCACCTACTGTCATGCGCATTCTGCTTCAAGCATGGTCGGGAATTGGCAGGTTCTTTATGCAGTCCATCCGTGGAGGTACTCTTTTTTCCATTACTGCACCATCGGCGGCGGCAGCTGATCAACTGATGGAACGTGGTCCGTGGTCTGTCATGGGTTGTAGCGTCTCTATTCATCCTTGGCCATCAGTTTGCAGGTTGGAAGACATCCCAGTTCACCTCATCTCTTTCTGGATCCAGGTGCATGGCCTCCCCCCGAATCTTATGACAGATGCGAATGCCCGATGGATTGGTGCTCAGGTGGGACGAGTTGTTGCTGTTGATGATCCTCAGACACTTGAATATTGGCGGGGCTACCTTCGTTTGCGGGTGGAAGTCGATTCTAGGGCACCCCTTCTCCCTGGTTTCTGGTTTAATCGATCTGAGTCGGTGGCGGCCTGGGCTGAGATCCAGTATGAACGTCTTTCGGACTGGTGCTTTCGTTGTGGCCGTCTAGGTCATACTATTTCCCACTGTCAGCTGCTGCGTCATCATTCCGCCGATAGAATGGGGTCTTGGAATGGCATAACCTCTCCTCGCAGGTTTACTGTGGATAACAATGGCATACCGGATCGTGAAACTCCTCAACAACACCGTCTTCCTCAAGACAATCGCCGGAACCGCTGGGTGGACCGTCAGGCTGATCGTAGGCCCCCAACAACTACAACGACCATGCTCTTCCCAAACATCGTTCAACCATGGAACCCTCTGCCGGAACCCGGTGCCCTAGTGTTGGCTCACCGCATGCAGGGTCGCTGGGAACCAACCATTACCACCTCTCCCACTGTCCAACAACAAACTGCCACGACACCCATTGTGGACCCCTCATGCTCTTTTCCTTCGTCGAAGGGTAAGGACAAGGTTGGCTTGTGGTCAGATACCTCAGCTCCTCTCTCTTCAGATATCCCTATTCCTAATGATGTTTTAGATATGCAACTTGCTATATCTCTTTCACTATCTGAGCTGGCAGATGCGGAAATGGCTGAGGCATCAAACTCAGTGGGCCGTTTGTTTGAAGACATCCTTCACCAACAACAGGCAGCTTTAACCTCTCTATTAAACCTAGGCCCACTTTCTGATCCTACTGTTCTCCAGCATCTACTAGCCCATCAAGAAATTCTCCGTGACCCCACTTTACTTACCCCTAACCCAGATATGTCACTATTCTCCTCTACCCTACATCCACCACCGCCAACACACTACCCCTCCCTCAACCCTCCTTCACCTACCCTTCCTTCATTCCCTGCCTTTGCAAACACACACACTGAACCACCCCTTTCCATTTCAACTCACACTACAGGTTTGGGTTCTCAAGATCTGGACCCGGCTTATTTGATTGCACAACCCATTCCGCCTACCATCCCAATTCCTCCTCTCTTACCAATTGGTTCTCTGACGGTATTGGCCCATCAATTCCGTCATCTCCATCTCAAACGGCGTTTACAGGAGGCATTTGATGAATCTTTTGATTCAGCTAAGAGACAGCGTGGGCCTACTGCTGAAGACCCTGTTCTTTCTCCACCTTCGGTTTTGGATTCTCGTTCCAAGTCCCCCAAGGTGCGTCGGTCCCGTCCAAGTCCCTCTGCTTCCACTTCTGGTCGTTGCCGGGGTCGTCGAGGAAGGCCAAGGAAGTCAGTCCCTTCATCTCTTTCTATCACAATCCCTGAACCTGAGATTCTTGCCCCAATTCCGGAGGAAAGTTACTACCCAGACCCAGCTATGGACATTATTGGGGCTCTTTCTCCTTCTAATGATGCAGCTATGTCCCCTCAGGTTACCCTTGTTGCTGTTCCTCCTGCTTCAGCTACTCTGGCTACTACTGCAGATTCCCTCCCACCTTCCTCTGTCATTGGCGATGGTAGCTGGCCAGCAGCTCCACAGTCCCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DDE_Tnp_4

Protein Analysis

716

Amino Acids

78.35

Weight (kDa)

6.31

Isoelectric Point (pI)

61.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC_4 PF14392 211 - 247 2.6e-07 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000697)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G35695
fragaria_vesca FvH4_4g17331 FvH4_6g20420 FvH4_6g24701 FvH4_6g52063
malus_domestica MD12G1024500.v1.1
prunus_persica Prupe.2G004900_v2.0.a1
pyrus_communis pycom10g09210 pycom111g03680 pycom12g13430 pycom16g19230
rosa_chinensis RchiOBHm_Chr5g0050651 RchiOBHm_Chr5g0054101 RchiOBHm_Chr6g0281391
rosa_multiflora Rmu_sc0000029.1_g000014 Rmu_sc0000147.1_g000039 Rmu_sc0000548.1_g000007 Rmu_sc0000913.1_g000001 Rmu_sc0000932.1_g000010 Rmu_sc0001304.1_g000041 Rmu_sc0001969.1_g000002 Rmu_sc0002357.1_g000042 Rmu_sc0002848.1_g000001 Rmu_sc0003113.1_g000003 Rmu_sc0003553.1_g000010 Rmu_sc0003642.1_g000003 Rmu_sc0004160.1_g000001 Rmu_sc0004511.1_g000001 Rmu_sc0004816.1_g000009 Rmu_sc0005500.1_g000008 Rmu_sc0005782.1_g000004 Rmu_sc0006833.1_g000005 Rmu_sc0007173.1_g000003 Rmu_sc0009973.1_g000001 Rmu_sc0016181.1_g000003 Rmu_sc0017974.1_g000001 Rmu_ssc0000255.1_g000020 Rmu_ssc0000263.1_g000011 Rmu_ssc0000366.1_g000012
rosa_roxburghii Rroxscaffold_1G00010110 Rroxscaffold_1G00023070 Rroxscaffold_1G00042980 Rroxscaffold_3G00273770 Rroxscaffold_4G00318480 Rroxscaffold_4G00323200 Rroxscaffold_5G00335150 Rroxscaffold_5G00340530 Rroxscaffold_5G00349500 Rroxscaffold_6G00401310 Rroxscaffold_6G00405610 Rroxscaffold_6G00409810 Rroxscaffold_7G00190250
rosa_rugosa Rorug04G0114300 Rorug05G0441600 Rorug07G0169600
rosa_wichuraiana Rw0G006340 Rw0G016280 Rw0G021420 Rw1G001890 Rw1G009310 Rw1G011130 Rw1G012600 Rw1G017460 Rw2G022560 Rw3G020960 Rw4G006850 Rw4G009950 Rw4G032810 Rw6G003640 Rw6G018030 Rw6G032240 Rw7G024530 Rw7G036060 Rw7G036830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 167
Acc16I TGCGCA 1 cut(s) 242
Acc36I ACCTGC 3 cut(s) 264, 408, 792
AccB1I GGYRCC 2 cut(s) 610, 983
AccIII TCCGGA 1 cut(s) 1951
AclWI GGATC 8 cut(s) 82, 92, 451, 464, 542, 664, 840, 1334
AcoI YGGCCR 3 cut(s) 404, 709, 2126
AcsI RAATTY 1 cut(s) 1377
AcuI CTGAAG 3 cut(s) 1143, 1782, 2046
AfaI GTAC 1 cut(s) 304
AfiI CCNNNNNNNGG 8 cut(s) 889, 973, 980, 994, 1009, 1297, 1951, 1981
AgsI TTSAA 5 cut(s) 254, 563, 956, 1277, 1548
AjnI CCWGG 3 cut(s) 459, 622, 659
AjuI GAANNNNNNNTTGG 2 cut(s) 760, 792
Alw21I GWGCWC 1 cut(s) 520
Alw26I GTCTC 2 cut(s) 394, 1735
AlwI GGATC 8 cut(s) 82, 92, 451, 464, 542, 664, 840, 1334
AlwNI CAGNNNCTG 2 cut(s) 91, 745
Aor13HI TCCGGA 1 cut(s) 1951
ApeKI GCWGC 6 cut(s) 338, 742, 745, 1301, 2018, 2132
ApoI RAATTY 1 cut(s) 1377
AspA2I CCTAGG 1 cut(s) 1324
AspLEI GCGC 1 cut(s) 243
AsuC2I CCSGG 3 cut(s) 981, 1586, 1868
AsuHPI GGTGA 4 cut(s) 431, 992, 1280, 1476
AvaII GGWCC 5 cut(s) 362, 892, 1081, 1582, 1827
AvrII CCTAGG 1 cut(s) 1324
AxyI CCTNAGG 1 cut(s) 2031
BaeGI GKGCMC 2 cut(s) 613, 988
BalI TGGCCA 2 cut(s) 406, 2128
BamHI GGATCC 1 cut(s) 456
BanI GGYRCC 2 cut(s) 610, 983
BanII GRGCYC 1 cut(s) 1999
BbsI GAAGAC 4 cut(s) 432, 851, 1284, 1770
Bbv12I GWGCWC 1 cut(s) 520
BbvCI CCTCAGC 2 cut(s) 1144, 1245
BbvI GCAGC 6 cut(s) 350, 729, 732, 1313, 2030, 2144
BceAI ACGGC 3 cut(s) 696, 1251, 1712
BciT130I CCWGG 3 cut(s) 461, 624, 661
BclI TGATCA 1 cut(s) 343
BcnI CCSGG 3 cut(s) 981, 1586, 1868
BcoDI GTCTC 2 cut(s) 394, 1735
BfaI CTAG 5 cut(s) 606, 716, 989, 1325, 1364
BfmI CTRYAG 2 cut(s) 1557, 2082
BfuAI ACCTGC 3 cut(s) 264, 408, 792
BglII AGATCT 1 cut(s) 1576
BisI GCNGC 9 cut(s) 333, 336, 339, 657, 743, 746, 1302, 2019, 2133
BlnI CCTAGG 1 cut(s) 1324
BlsI GCNGC 9 cut(s) 334, 337, 340, 658, 744, 747, 1303, 2020, 2134
Bme1390I CCNGG 6 cut(s) 461, 624, 661, 981, 1586, 1868
Bme18I GGWCC 5 cut(s) 362, 892, 1081, 1582, 1827
BmrFI CCNGG 6 cut(s) 461, 624, 661, 981, 1586, 1868
BmrI ACTGGG 1 cut(s) 428
BmsI GCATC 5 cut(s) 484, 1222, 1259, 1366, 2005
BmuI ACTGGG 1 cut(s) 428
BpiI GAAGAC 4 cut(s) 432, 851, 1284, 1770
BpmI CTGGAG 1 cut(s) 1337
Bpu10I CCTNAGC 3 cut(s) 519, 1144, 1245
BpuEI CTTGAG 2 cut(s) 849, 1557
BpuMI CCSGG 3 cut(s) 981, 1586, 1868
Bsa29I ATCGAT 1 cut(s) 640
BsaWI WCCGGW 2 cut(s) 829, 1951
BsaXI ACNNNNNCTCC 8 cut(s) 603, 633, 1024, 1054, 1132, 1162, 1451, 1481
Bsc4I CCNNNNNNNGG 8 cut(s) 889, 973, 980, 994, 1009, 1297, 1951, 1981
Bse1I ACTGG 5 cut(s) 126, 195, 434, 673, 698
Bse21I CCTNAGG 1 cut(s) 2031
BseAI TCCGGA 1 cut(s) 1951
BseBI CCWGG 3 cut(s) 461, 624, 661
BseCI ATCGAT 1 cut(s) 640
BseGI GGATG 9 cut(s) 22, 52, 57, 291, 397, 429, 1281, 1441, 1620
BseLI CCNNNNNNNGG 8 cut(s) 889, 973, 980, 994, 1009, 1297, 1951, 1981
BseNI ACTGG 5 cut(s) 126, 195, 434, 673, 698
BseRI GAGGAG 7 cut(s) 9, 72, 786, 834, 1140, 1420, 1623
BseSI GKGCMC 2 cut(s) 613, 988
BseXI GCAGC 6 cut(s) 350, 729, 732, 1313, 2030, 2144
BseYI CCCAGC 3 cut(s) 885, 1017, 1975
BsgI GTGCAG 1 cut(s) 306
BshNI GGYRCC 2 cut(s) 610, 983
BshVI ATCGAT 1 cut(s) 640
BsiHKAI GWGCWC 1 cut(s) 520
BsiSI CCGG 7 cut(s) 830, 877, 974, 981, 1586, 1867, 1952
BslFI GGGAC 7 cut(s) 540, 1795, 1813, 1824, 1883, 2011, 2128
BslI CCNNNNNNNGG 8 cut(s) 889, 973, 980, 994, 1009, 1297, 1951, 1981
BsmAI GTCTC 2 cut(s) 394, 1735
BsmBI CGTCTC 1 cut(s) 394
BsmFI GGGAC 7 cut(s) 540, 1795, 1813, 1824, 1883, 2011, 2128
BsmI GAATGC 2 cut(s) 243, 505
Bsp1286I GDGCHC 4 cut(s) 520, 613, 988, 1999
Bsp13I TCCGGA 1 cut(s) 1951
Bsp19I CCATGG 1 cut(s) 959
BspDI ATCGAT 1 cut(s) 640
BspEI TCCGGA 1 cut(s) 1951
BspMAI CTGCAG 1 cut(s) 2086
BspMI ACCTGC 3 cut(s) 264, 408, 792
BspPI GGATC 8 cut(s) 82, 92, 451, 464, 542, 664, 840, 1334
BspQI GCTCTTC 1 cut(s) 944
BspT107I GGYRCC 2 cut(s) 610, 983
BsrI ACTGG 5 cut(s) 126, 195, 434, 673, 698
BssT1I CCWWGG 5 cut(s) 401, 959, 1324, 1815, 1886
Bst2UI CCWGG 3 cut(s) 461, 624, 661
Bst6I CTCTTC 2 cut(s) 944, 1162
BstC8I GCNNGC 4 cut(s) 1007, 1227, 2126, 2130
BstDSI CCRYGG 3 cut(s) 295, 365, 959
BstEII GGTNACC 1 cut(s) 2035
BstF5I GGATG 9 cut(s) 22, 52, 57, 291, 397, 429, 1281, 1441, 1620
BstHHI GCGC 1 cut(s) 243
BstMAI GTCTC 2 cut(s) 394, 1735
BstMWI GCNNNNNNNGC 9 cut(s) 247, 329, 338, 662, 882, 1241, 2072, 2081, 2121
BstNI CCWGG 3 cut(s) 461, 624, 661
BstNSI RCATGY 1 cut(s) 1009
BstPI GGTNACC 1 cut(s) 2035
BstSCI CCNGG 6 cut(s) 459, 622, 659, 979, 1584, 1866
BstSFI CTRYAG 2 cut(s) 1557, 2082
BstSLI GKGCMC 2 cut(s) 613, 988
BstV1I GCAGC 6 cut(s) 350, 729, 732, 1313, 2030, 2144
BstV2I GAAGAC 4 cut(s) 432, 851, 1284, 1770
BstX2I RGATCY 4 cut(s) 87, 456, 669, 1576
BstXI CCANNNNNNTGG 1 cut(s) 467
BstYI RGATCY 4 cut(s) 87, 456, 669, 1576
Bsu15I ATCGAT 1 cut(s) 640
Bsu36I CCTNAGG 1 cut(s) 2031
BsuTUI ATCGAT 1 cut(s) 640
BtgI CCRYGG 3 cut(s) 295, 365, 959
BtgZI GCGATG 1 cut(s) 2130
BtsCI GGATG 9 cut(s) 22, 52, 57, 291, 397, 429, 1281, 1441, 1620
BtsIMutI CAGTG 4 cut(s) 733, 1044, 1266, 1524
BveI ACCTGC 3 cut(s) 264, 408, 792
Cac8I GCNNGC 4 cut(s) 1007, 1227, 2126, 2130
CaiI CAGNNNCTG 2 cut(s) 91, 745
CfoI GCGC 1 cut(s) 243
ClaI ATCGAT 1 cut(s) 640
CseI GACGC 3 cut(s) 376, 737, 1811
Csp6I GTAC 1 cut(s) 303
CspCI CAANNNNNGTGG 2 cut(s) 1242, 1277
CviQI GTAC 1 cut(s) 303
DrdI GACNNNNNNGTC 1 cut(s) 167
DseDI GACNNNNNNGTC 1 cut(s) 167
EaeI YGGCCR 3 cut(s) 404, 709, 2126
Eam1104I CTCTTC 2 cut(s) 944, 1162
EarI CTCTTC 2 cut(s) 944, 1162
EciI GGCGGA 3 cut(s) 112, 748, 1602
Eco130I CCWWGG 5 cut(s) 401, 959, 1324, 1815, 1886
Eco24I GRGCYC 1 cut(s) 1999
Eco32I GATATC 1 cut(s) 1165
Eco47I GGWCC 5 cut(s) 362, 892, 1081, 1582, 1827
Eco57I CTGAAG 3 cut(s) 1143, 1782, 2046
Eco81I CCTNAGG 1 cut(s) 2031
Eco91I GGTNACC 1 cut(s) 2035
EcoO109I RGGNCCY 1 cut(s) 912
EcoO65I GGTNACC 1 cut(s) 2035
EcoRII CCWGG 3 cut(s) 459, 622, 659
EcoRV GATATC 1 cut(s) 1165
EcoT14I CCWWGG 5 cut(s) 401, 959, 1324, 1815, 1886
EcoT38I GRGCYC 1 cut(s) 1999
ErhI CCWWGG 5 cut(s) 401, 959, 1324, 1815, 1886
Esp3I CGTCTC 1 cut(s) 394
FalI AAGNNNNNCTT 4 cut(s) 1112, 1144, 1269, 1301
FaqI GGGAC 7 cut(s) 540, 1795, 1813, 1824, 1883, 2011, 2128
FauI CCCGC 2 cut(s) 564, 582
FbaI TGATCA 1 cut(s) 343
Fnu4HI GCNGC 9 cut(s) 333, 336, 339, 657, 743, 746, 1302, 2019, 2133
FokI GGATG 9 cut(s) 9, 39, 44, 278, 384, 416, 1268, 1428, 1607
FriOI GRGCYC 1 cut(s) 1999
Fsp4HI GCNGC 9 cut(s) 333, 336, 339, 657, 743, 746, 1302, 2019, 2133
FspAI RTGCGCAY 1 cut(s) 242
FspBI CTAG 5 cut(s) 606, 716, 989, 1325, 1364
FspI TGCGCA 1 cut(s) 242
GlaI GCGC 1 cut(s) 242
GluI GCNGC 9 cut(s) 333, 336, 339, 657, 743, 746, 1302, 2019, 2133
GsaI CCCAGC 3 cut(s) 889, 1021, 1979
GsuI CTGGAG 1 cut(s) 1337
HapII CCGG 7 cut(s) 830, 877, 974, 981, 1586, 1867, 1952
HgaI GACGC 3 cut(s) 376, 737, 1811
HhaI GCGC 1 cut(s) 243
Hin6I GCGC 1 cut(s) 241
HinP1I GCGC 1 cut(s) 241
HinfI GANTC 8 cut(s) 481, 602, 647, 1721, 1730, 1796, 1936, 2087
HpaII CCGG 7 cut(s) 830, 877, 974, 981, 1586, 1867, 1952
HphI GGTGA 4 cut(s) 431, 992, 1280, 1476
Hpy166II GTNNAC 6 cut(s) 6, 439, 807, 892, 1081, 1703
Hpy188III TCNNGA 8 cut(s) 264, 454, 836, 866, 1373, 1574, 1580, 1952
Hpy8I GTNNAC 6 cut(s) 6, 439, 807, 892, 1081, 1703
Hpy99I CGWCG 3 cut(s) 1108, 1827, 1878
HpyCH4IV ACGT 2 cut(s) 358, 682
HpyF10VI GCNNNNNNNGC 9 cut(s) 247, 329, 338, 662, 882, 1241, 2072, 2081, 2121
HpySE526I ACGT 2 cut(s) 358, 682
HspAI GCGC 1 cut(s) 241
Kpn2I TCCGGA 1 cut(s) 1951
Ksp22I TGATCA 1 cut(s) 343
LguI GCTCTTC 1 cut(s) 944
LmnI GCTCC 2 cut(s) 1153, 2140
Lsp1109I GCAGC 6 cut(s) 350, 729, 732, 1313, 2030, 2144
LweI GCATC 5 cut(s) 484, 1222, 1259, 1366, 2005
MaeI CTAG 5 cut(s) 606, 716, 989, 1325, 1364
MaeII ACGT 2 cut(s) 358, 682
MaeIII GTNAC 4 cut(s) 1385, 1419, 1961, 2035
MboII GAAGA 6 cut(s) 437, 851, 931, 1149, 1289, 1775
MfeI CAATTG 1 cut(s) 1644
MflI RGATCY 4 cut(s) 87, 456, 669, 1576
MhlI GDGCHC 4 cut(s) 520, 613, 988, 1999
MlsI TGGCCA 2 cut(s) 406, 2128
MluCI AATT 6 cut(s) 267, 1377, 1626, 1644, 1673, 1947
MluNI TGGCCA 2 cut(s) 406, 2128
MlyI GAGTC 1 cut(s) 656
MmeI TCCRAC 2 cut(s) 402, 1075
Mox20I TGGCCA 2 cut(s) 406, 2128
MroI TCCGGA 1 cut(s) 1951
MscI TGGCCA 2 cut(s) 406, 2128
MseI TTAA 4 cut(s) 222, 636, 1307, 1319
Msp20I TGGCCA 2 cut(s) 406, 2128
MspA1I CMGCKG 3 cut(s) 341, 742, 885
MspI CCGG 7 cut(s) 830, 877, 974, 981, 1586, 1867, 1952
MspR9I CCNGG 6 cut(s) 461, 624, 661, 981, 1586, 1868
MunI CAATTG 1 cut(s) 1644
Mva1269I GAATGC 2 cut(s) 243, 505
MvaI CCWGG 3 cut(s) 461, 624, 661
MwoI GCNNNNNNNGC 9 cut(s) 247, 329, 338, 662, 882, 1241, 2072, 2081, 2121
NciI CCSGG 3 cut(s) 981, 1586, 1868
NcoI CCATGG 1 cut(s) 959
NmuCI GTSAC 2 cut(s) 1385, 1419
NsbI TGCGCA 1 cut(s) 242
NspI RCATGY 1 cut(s) 1009
PaeI GCATGC 1 cut(s) 1009
PciSI GCTCTTC 1 cut(s) 944
PcsI WCGNNNNNNNCGW 1 cut(s) 709
PctI GAATGC 2 cut(s) 243, 505
PfeI GAWTC 7 cut(s) 481, 602, 1721, 1730, 1796, 1936, 2087
PkrI GCNGC 9 cut(s) 334, 337, 340, 658, 744, 747, 1303, 2020, 2134
PleI GAGTC 1 cut(s) 655
PpsI GAGTC 1 cut(s) 655
Psp6I CCWGG 3 cut(s) 459, 622, 659
PspEI GGTNACC 1 cut(s) 2035
PspFI CCCAGC 3 cut(s) 885, 1017, 1975
PspGI CCWGG 3 cut(s) 459, 622, 659
PstI CTGCAG 1 cut(s) 2086
PstNI CAGNNNCTG 2 cut(s) 91, 745
PsuI RGATCY 4 cut(s) 87, 456, 669, 1576
PvuII CAGCTG 2 cut(s) 341, 742
RsaI GTAC 1 cut(s) 304
RsaNI GTAC 1 cut(s) 303
SapI GCTCTTC 1 cut(s) 944
SaqAI TTAA 4 cut(s) 222, 636, 1307, 1319
SatI GCNGC 9 cut(s) 333, 336, 339, 657, 743, 746, 1302, 2019, 2133
SchI GAGTC 1 cut(s) 656
ScrFI CCNGG 6 cut(s) 461, 624, 661, 981, 1586, 1868
SduI GDGCHC 4 cut(s) 520, 613, 988, 1999
SfaNI GCATC 5 cut(s) 484, 1222, 1259, 1366, 2005
SfcI CTRYAG 2 cut(s) 1557, 2082
SinI GGWCC 5 cut(s) 362, 892, 1081, 1582, 1827
SmlI CTYRAG 2 cut(s) 864, 1572
SmoI CTYRAG 2 cut(s) 864, 1572
SphI GCATGC 1 cut(s) 1009
Sse9I AATT 6 cut(s) 267, 1377, 1626, 1644, 1673, 1947
SspI AATATT 1 cut(s) 566
SspMI CTAG 5 cut(s) 606, 716, 989, 1325, 1364
StyD4I CCNGG 6 cut(s) 459, 622, 659, 979, 1584, 1866
StyI CCWWGG 5 cut(s) 401, 959, 1324, 1815, 1886
TaiI ACGT 2 cut(s) 361, 685
TaqI TCGA 5 cut(s) 177, 600, 640, 1106, 1876
TaqII GACCGA 1 cut(s) 1815
TasI AATT 6 cut(s) 267, 1377, 1626, 1644, 1673, 1947
TauI GCSGC 3 cut(s) 335, 338, 659
TfiI GAWTC 7 cut(s) 481, 602, 1721, 1730, 1796, 1936, 2087
Tru1I TTAA 4 cut(s) 222, 636, 1307, 1319
Tru9I TTAA 4 cut(s) 222, 636, 1307, 1319
TscAI CASTG 4 cut(s) 740, 1051, 1266, 1531
TseFI GTSAC 2 cut(s) 1385, 1419
TseI GCWGC 6 cut(s) 338, 742, 745, 1301, 2018, 2132
Tsp45I GTSAC 2 cut(s) 1385, 1419
TspDTI ATGAA 7 cut(s) 19, 195, 386, 693, 1488, 1734, 1893
TspGWI ACGGA 4 cut(s) 284, 354, 1373, 1667
TspRI CASTG 4 cut(s) 740, 1051, 1266, 1531
VpaK11BI GGWCC 5 cut(s) 362, 892, 1081, 1582, 1827
XapI RAATTY 1 cut(s) 1377
XceI RCATGY 1 cut(s) 1009
XmaJI CCTAGG 1 cut(s) 1324
XspI CTAG 5 cut(s) 606, 716, 989, 1325, 1364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.