pycom13g24280
ERF Family

DNA RNA polymerases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0000440
Physical Location & Seq
Forward (+)
21473565 .. 21476151
2587 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1980 bp
ATGAGCTTTTCAGGTTTGCCTCATACTCAGTGTGGTGTAGACTCCATTTTTGTTGTGGTGGATCGATTTTCTAAAATGGTTCACTTTATTGCCTGCAAGAAGACAACGGATGCTTTCGTGATGTATACCGAATTCATGGGTTACCAAGTTCAATTGAGCCTGTGGAAATTAGCTAATTCACAATTGAATTTCAGCAGTGTCTATCATCTTCAAACTGATGGGCAAACGGAAGTTGTGAATCTCTCATTGGGCGATCTTTTGCGATGCTTAGTTGGTGAGCATCTAAAGTCATGGGACCAAAAGTTATGTATTGCAGAGTTCACCTACAATCGTTCCGTCAATCGCATCACTGGAATGTGTCCCTTATATATCGTGTTTGGCTTAATTCCTCGAGCACTAGTTGGTCTTGCTCCTGTTCCTAACGTGAAAAGAATTAGTGGCAAAGCTGAAAGTTTCGTTGACAATGTCTATCAAAAATATAAAGCTCATGCAAATTCCAAAAGGCGAATGGTGGAGTTTGATGTAGGAGATTTTGTTTGGGCAGTTTTGACAGCTGGAGAATACAATAAACTGTCTGCAAGGAAGATTGGGCCATATGAAATTCTTGAAAAGATTAACCCTAATGATTATCGCCTGAAGTTACCTAGCCATATTCATACTTCTAATGTGTTCAATGTGAAACATCTCATTCCATTCAAAGGGGACAATGAGGATATTGGAACTGCAAATTCGAGGGCGAATTTTCTCCAACCCGGAAAGGATGATACAGATATGATGGCTAGTTCATTTATGGATCATTGGGATAAATTGAATCTTAGGGCGTTTTTTTGGCTGCTCATAACAGCTAGGCCGTTTTTATGTGTTATTAAATTTAAGGCCCTTTTGAATTCTGAATGTAAGTTTCAAATTATGAAATATTCAAAGAAGTTTCTCAGCTTGTGCCTTTCTCTTTGTGAGATTGTTTTGCTTTGTTCTTCTAGTTGTATATGTTGTAGGCTAGTACTAGAGACGGGGCTTTGGGCTATTAGTTTTCTTTTTTCGTTTTTTTTTTTTCTAACTACTGCACCCTCTGCTTTAGCCTCCAGAGATGTTGAGCTGCACATGAGAATATTTGAGAGTCTTGCCCATTTAATAAAGGCATTCTCATCTTCTTTGGGAAAAATGCCACGTGTCATCTTCTGGATTTTCGTGATTATTTTTTGCTCCACAATGAGCATTACAAAGGCATATACGATCGGATTGTTTTTCCTTTTTTTAACAAATGATATTATCTACACTAAGGGAGAGGGGGTGGGCTTAACCTCACAATGGGTTAACCTCTCATTTATGAGTGAAAAGAAATACCACTATACCGTAGTACTAAGTGGCTACAAATCTCTCTTTTATATCTTTATTTTGCGATCATTTTCTTTATACTTTGATTGTGGTTTCCTTTTTGTGGGGCATTTTGAAAATTTAGTGGCTTACTATTTAACGCATAAATGTACATGTGATCAGTATTTCCAATCATGGGTGCTTGCCAACATCATTTTCGATATCCATATAAATAATATCCACCACACAACTCCGGTGTCACCACCCAAATATTGTATCTGCATATTCGCCAAATACAAAAAATGTACAATATATTGTACCCTTCATTCAAACACAAACACAAGGAAAGCTGGATTAATGCGCATTGCACTGAATTCCACTCACCAACACAATAATGTCGTAGCAGTTTCACCTCGCCGCATTAGACAACACCTGAGACCTAGCTACCTAGACGTGCCTTTTTCAACCGTCTCAGCCCACCACGTACCCCTTGATTCTTCTACTCGGCATCCAGTACAAAATTCCGGACACATCCATCTCCATCTTCTTCTTTTTCCATACATAACTGGTTTCTGGATAATTAACGAACATCGAAACCTTAAGATAACAAATTTAAACAAAAAAATAAAAATAAAAAGTAAACGTGAGTATTTAATTAAGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Chromo RVT_1 Retrotrans_gag rve zf-H2C2

Protein Analysis

660

Amino Acids

75.8

Weight (kDa)

9.35

Isoelectric Point (pI)

37.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SH3_Tf2-1 PF24626 184 - 232 6.9e-16 Tf2-1-like, SH3 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000440)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20313 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_5g25851
prunus_persica Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1
pyrus_communis pycom01g01210 pycom02g12000 pycom10g21410 pycom11g11060 pycom13g24280
rosa_chinensis RchiOBHm_Chr3g0461871 RchiOBHm_Chr4g0427221 RchiOBHm_Chr4g0427231 RchiOBHm_Chr6g0270081 RchiOBHm_Chr6g0270121 RchiOBHm_Chr6g0270151 RchiOBHm_Chr6g0270161 RchiOBHm_Chr6g0270171 RchiOBHm_Chr6g0270181 RchiOBHm_Chr6g0270191 RchiOBHm_Chr7g0229301
rosa_laevigata RLG00000013809 RLG00000013810 RLG00000013812 RLG00000013814 RLG00000013817 RLG00000013818
rosa_multiflora Rmu_sc0000918.1_g000004 Rmu_sc0000918.1_g000019 Rmu_sc0000918.1_g000027 Rmu_sc0002817.1_g000013 Rmu_sc0004366.1_g000009 Rmu_sc0004376.1_g000011 Rmu_sc0004376.1_g000014 Rmu_sc0004376.1_g000021 Rmu_sc0006909.1_g000002 Rmu_sc0011356.1_g000003 Rmu_sc0011369.1_g000005 Rmu_sc0017552.1_g000001
rosa_roxburghii Rroxscaffold_5G00354200 Rroxscaffold_7G00198080 Rroxscaffold_7G00198090 Rroxscaffold_7G00198100 Rroxscaffold_7G00198130 Rroxscaffold_7G00198170
rosa_rugosa Rorug06G0052400 Rorug06G0052500 Rorug06G0053000
rosa_samantha Rh6AG171300 Rh6AG171400 Rh6AG171800 Rh6AG171900 Rh6AG172000 Rh6AG172100 Rh6AG369700 Rh6BG175800 Rh6BG175900 Rh6BG176200 Rh6BG176300 Rh6CG170900 Rh6CG171100 Rh6CG171400 Rh6CG171500 Rh6CG171700 Rh6CG171900 Rh6CG172000 Rh6CG172100
rosa_wichuraiana Rw6G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1676
AccI GTMKAC 2 cut(s) 39, 125
AccIII TCCGGA 1 cut(s) 1838
AciI CCGC 1 cut(s) 1732
AclWI GGATC 2 cut(s) 69, 801
AcuI CTGAAG 1 cut(s) 656
AcvI CACGTG 1 cut(s) 1169
AfaI GTAC 7 cut(s) 1002, 1359, 1486, 1621, 1633, 1800, 1830
AfiI CCNNNNNNNGG 4 cut(s) 698, 1308, 1438, 1510
AflII CTTAAG 1 cut(s) 1913
AflIII ACRYGT 2 cut(s) 1168, 1487
AhlI ACTAGT 1 cut(s) 397
AjiI CACGTC 1 cut(s) 1768
AjuI GAANNNNNNNTTGG 4 cut(s) 230, 262, 1514, 1546
Alw21I GWGCWC 1 cut(s) 397
Alw26I GTCTC 3 cut(s) 1001, 1744, 1789
AlwI GGATC 2 cut(s) 69, 801
Ama87I CYCGRG 1 cut(s) 390
Aor13HI TCCGGA 1 cut(s) 1838
AoxI GGCC 3 cut(s) 590, 848, 876
ApeKI GCWGC 2 cut(s) 832, 1096
ArsI GACNNNNNNTTYG 2 cut(s) 32, 64
AseI ATTAAT 1 cut(s) 1670
AspLEI GCGC 1 cut(s) 1677
AspS9I GGNCC 3 cut(s) 295, 590, 877
AsuC2I CCSGG 1 cut(s) 753
AsuHPI GGTGA 5 cut(s) 287, 313, 1566, 1688, 1716
AvaI CYCGRG 1 cut(s) 390
AvaII GGWCC 1 cut(s) 295
BbrPI CACGTG 1 cut(s) 1169
BbsI GAAGAC 1 cut(s) 107
Bbv12I GWGCWC 1 cut(s) 397
BbvI GCAGC 2 cut(s) 819, 1083
BccI CCATC 4 cut(s) 212, 769, 1857, 1863
BceAI ACGGC 1 cut(s) 835
BclI TGATCA 1 cut(s) 1492
BcnI CCSGG 1 cut(s) 753
BcoDI GTCTC 3 cut(s) 1001, 1744, 1789
BcuI ACTAGT 1 cut(s) 397
BfaI CTAG 9 cut(s) 398, 645, 780, 846, 978, 998, 1004, 1755, 1763
BfrI CTTAAG 1 cut(s) 1913
BisI GCNGC 3 cut(s) 833, 1097, 1732
BlsI GCNGC 3 cut(s) 834, 1098, 1733
BmcAI AGTACT 2 cut(s) 1002, 1359
Bme1390I CCNGG 1 cut(s) 753
Bme18I GGWCC 1 cut(s) 295
BmeT110I CYCGRG 1 cut(s) 390
BmgBI CACGTC 1 cut(s) 1768
BmgT120I GGNCC 3 cut(s) 295, 590, 877
BmiI GGNNCC 1 cut(s) 296
BmrFI CCNGG 1 cut(s) 753
BmsI GCATC 5 cut(s) 100, 254, 289, 354, 1831
BpiI GAAGAC 1 cut(s) 107
BpmI CTGGAG 2 cut(s) 576, 1066
BpuMI CCSGG 1 cut(s) 753
Bsa29I ATCGAT 1 cut(s) 64
BsaAI YACGTR 2 cut(s) 1169, 1798
BsaI GGTCTC 1 cut(s) 1744
BsaWI WCCGGW 2 cut(s) 1567, 1838
BsaXI ACNNNNNCTCC 4 cut(s) 519, 549, 1275, 1305
Bsc4I CCNNNNNNNGG 4 cut(s) 698, 1308, 1438, 1510
Bse1I ACTGG 3 cut(s) 355, 1826, 1885
Bse3DI GCAATG 1 cut(s) 1677
BseAI TCCGGA 1 cut(s) 1838
BseCI ATCGAT 1 cut(s) 64
BseGI GGATG 4 cut(s) 115, 766, 1822, 1845
BseLI CCNNNNNNNGG 4 cut(s) 698, 1308, 1438, 1510
BseMI GCAATG 1 cut(s) 1677
BseMII CTCAG 4 cut(s) 41, 946, 1739, 1800
BseNI ACTGG 3 cut(s) 355, 1826, 1885
BseXI GCAGC 2 cut(s) 819, 1083
BsgI GTGCAG 2 cut(s) 1047, 1082
Bsh1285I CGRYCG 1 cut(s) 1236
BshFI GGCC 3 cut(s) 592, 850, 878
BshVI ATCGAT 1 cut(s) 64
BsiEI CGRYCG 1 cut(s) 1236
BsiHKAI GWGCWC 1 cut(s) 397
BsiHKCI CYCGRG 1 cut(s) 390
BsiSI CCGG 3 cut(s) 753, 1568, 1839
BslFI GGGAC 3 cut(s) 308, 345, 716
BslI CCNNNNNNNGG 4 cut(s) 698, 1308, 1438, 1510
BsmAI GTCTC 3 cut(s) 1001, 1744, 1789
BsmBI CGTCTC 2 cut(s) 1001, 1789
BsmFI GGGAC 3 cut(s) 308, 345, 716
BsmI GAATGC 1 cut(s) 1139
BsnI GGCC 3 cut(s) 592, 850, 878
Bso31I GGTCTC 1 cut(s) 1744
BsoBI CYCGRG 1 cut(s) 390
Bsp1286I GDGCHC 1 cut(s) 397
Bsp13I TCCGGA 1 cut(s) 1838
Bsp1407I TGTACA 2 cut(s) 1484, 1619
Bsp143I GATC 6 cut(s) 61, 253, 793, 1233, 1400, 1492
BspACI CCGC 1 cut(s) 1732
BspANI GGCC 3 cut(s) 592, 850, 878
BspCNI CTCAG 4 cut(s) 40, 945, 1740, 1799
BspDI ATCGAT 1 cut(s) 64
BspEI TCCGGA 1 cut(s) 1838
BspLI GGNNCC 1 cut(s) 296
BspPI GGATC 2 cut(s) 69, 801
BspTI CTTAAG 1 cut(s) 1913
BspTNI GGTCTC 1 cut(s) 1744
BsrDI GCAATG 1 cut(s) 1677
BsrGI TGTACA 2 cut(s) 1484, 1619
BsrI ACTGG 3 cut(s) 355, 1826, 1885
BssMI GATC 6 cut(s) 61, 253, 793, 1233, 1400, 1492
BssNAI GTATAC 1 cut(s) 126
Bst1107I GTATAC 1 cut(s) 126
Bst4CI ACNGT 3 cut(s) 573, 1354, 1783
BstAFI CTTAAG 1 cut(s) 1913
BstAPI GCANNNNNTGC 1 cut(s) 1070
BstAUI TGTACA 2 cut(s) 1484, 1619
BstBAI YACGTR 2 cut(s) 1169, 1798
BstC8I GCNNGC 2 cut(s) 94, 1518
BstDEI CTNAG 8 cut(s) 27, 268, 815, 932, 1278, 1361, 1748, 1786
BstEII GGTNACC 1 cut(s) 140
BstF5I GGATG 4 cut(s) 115, 766, 1822, 1845
BstHHI GCGC 1 cut(s) 1677
BstKTI GATC 6 cut(s) 64, 256, 796, 1236, 1403, 1495
BstMAI GTCTC 3 cut(s) 1001, 1744, 1789
BstMBI GATC 6 cut(s) 61, 253, 793, 1233, 1400, 1492
BstMCI CGRYCG 1 cut(s) 1236
BstMWI GCNNNNNNNGC 1 cut(s) 1070
BstNSI RCATGY 1 cut(s) 1491
BstPI GGTNACC 1 cut(s) 140
BstSCI CCNGG 1 cut(s) 751
BstV1I GCAGC 2 cut(s) 819, 1083
BstV2I GAAGAC 1 cut(s) 107
BstZ17I GTATAC 1 cut(s) 126
Bsu15I ATCGAT 1 cut(s) 64
BsuRI GGCC 3 cut(s) 592, 850, 878
BsuTUI ATCGAT 1 cut(s) 64
BtgZI GCGATG 1 cut(s) 277
BtrI CACGTC 1 cut(s) 1768
BtsCI GGATG 4 cut(s) 115, 766, 1822, 1845
BtsI GCAGTG 1 cut(s) 202
BtsIMutI CAGTG 4 cut(s) 35, 202, 348, 1682
Cac8I GCNNGC 2 cut(s) 94, 1518
CfoI GCGC 1 cut(s) 1677
Cfr13I GGNCC 3 cut(s) 295, 590, 877
ClaI ATCGAT 1 cut(s) 64
Csp6I GTAC 7 cut(s) 1001, 1358, 1485, 1620, 1632, 1799, 1829
CviAII CATG 6 cut(s) 136, 291, 488, 1102, 1488, 1509
CviQI GTAC 7 cut(s) 1001, 1358, 1485, 1620, 1632, 1799, 1829
DdeI CTNAG 8 cut(s) 27, 268, 815, 932, 1278, 1361, 1748, 1786
DpnI GATC 6 cut(s) 63, 255, 795, 1235, 1402, 1494
DpnII GATC 6 cut(s) 61, 253, 793, 1233, 1400, 1492
DraI TTTAAA 1 cut(s) 1929
Eco31I GGTCTC 1 cut(s) 1744
Eco32I GATATC 1 cut(s) 1537
Eco47I GGWCC 1 cut(s) 295
Eco57I CTGAAG 1 cut(s) 656
Eco72I CACGTG 1 cut(s) 1169
Eco88I CYCGRG 1 cut(s) 390
Eco91I GGTNACC 1 cut(s) 140
EcoO109I RGGNCCY 1 cut(s) 877
EcoO65I GGTNACC 1 cut(s) 140
EcoRI GAATTC 3 cut(s) 131, 886, 1687
EcoRV GATATC 1 cut(s) 1537
Esp3I CGTCTC 2 cut(s) 1001, 1789
FaeI CATG 6 cut(s) 139, 294, 491, 1105, 1491, 1512
FaqI GGGAC 3 cut(s) 308, 345, 716
FatI CATG 6 cut(s) 135, 290, 487, 1101, 1487, 1508
FauNDI CATATG 1 cut(s) 595
FbaI TGATCA 1 cut(s) 1492
FblI GTMKAC 2 cut(s) 39, 125
Fnu4HI GCNGC 3 cut(s) 833, 1097, 1732
FokI GGATG 4 cut(s) 122, 773, 1809, 1832
Fsp4HI GCNGC 3 cut(s) 833, 1097, 1732
FspAI RTGCGCAY 1 cut(s) 1676
FspBI CTAG 9 cut(s) 398, 645, 780, 846, 978, 998, 1004, 1755, 1763
FspI TGCGCA 1 cut(s) 1676
GlaI GCGC 1 cut(s) 1676
GluI GCNGC 3 cut(s) 833, 1097, 1732
GsuI CTGGAG 2 cut(s) 576, 1066
HaeIII GGCC 3 cut(s) 592, 850, 878
HapII CCGG 3 cut(s) 753, 1568, 1839
HhaI GCGC 1 cut(s) 1677
Hin1II CATG 6 cut(s) 139, 294, 491, 1105, 1491, 1512
Hin6I GCGC 1 cut(s) 1675
HinP1I GCGC 1 cut(s) 1675
HincII GTYRAC 2 cut(s) 460, 1315
HindII GTYRAC 2 cut(s) 460, 1315
HinfI GANTC 5 cut(s) 41, 238, 811, 1117, 1808
HpaI GTTAAC 1 cut(s) 1315
HpaII CCGG 3 cut(s) 753, 1568, 1839
HphI GGTGA 5 cut(s) 287, 313, 1566, 1688, 1716
Hpy166II GTNNAC 7 cut(s) 40, 82, 126, 321, 460, 1315, 1955
Hpy188I TCNGA 2 cut(s) 892, 1238
Hpy188III TCNNGA 7 cut(s) 118, 605, 1083, 1180, 1189, 1839, 1888
Hpy8I GTNNAC 7 cut(s) 40, 82, 126, 321, 460, 1315, 1955
HpyAV CCTTC 1 cut(s) 1646
HpyCH4III ACNGT 3 cut(s) 573, 1354, 1783
HpyCH4IV ACGT 5 cut(s) 423, 1168, 1767, 1797, 1957
HpyCH4V TGCA 9 cut(s) 96, 314, 491, 578, 725, 1064, 1099, 1596, 1682
HpyF10VI GCNNNNNNNGC 1 cut(s) 1070
HpyF3I CTNAG 8 cut(s) 27, 268, 815, 932, 1278, 1361, 1748, 1786
HpySE526I ACGT 5 cut(s) 423, 1168, 1767, 1797, 1957
Hsp92II CATG 6 cut(s) 139, 294, 491, 1105, 1491, 1512
HspAI GCGC 1 cut(s) 1675
Kpn2I TCCGGA 1 cut(s) 1838
Ksp22I TGATCA 1 cut(s) 1492
KspAI GTTAAC 1 cut(s) 1315
Kzo9I GATC 6 cut(s) 61, 253, 793, 1233, 1400, 1492
LmnI GCTCC 2 cut(s) 415, 1208
Lsp1109I GCAGC 2 cut(s) 819, 1083
LweI GCATC 5 cut(s) 100, 254, 289, 354, 1831
MaeI CTAG 9 cut(s) 398, 645, 780, 846, 978, 998, 1004, 1755, 1763
MaeII ACGT 5 cut(s) 423, 1168, 1767, 1797, 1957
MaeIII GTNAC 3 cut(s) 140, 639, 1572
MalI GATC 6 cut(s) 63, 255, 795, 1235, 1402, 1494
MboI GATC 6 cut(s) 61, 253, 793, 1233, 1400, 1492
MboII GAAGA 9 cut(s) 112, 200, 595, 966, 1140, 1168, 1803, 1850, 1853
MfeI CAATTG 2 cut(s) 152, 182
MhlI GDGCHC 1 cut(s) 397
MlyI GAGTC 2 cut(s) 35, 1126
MmeI TCCRAC 1 cut(s) 772
MroI TCCGGA 1 cut(s) 1838
MslI CAYNNNNRTG 2 cut(s) 353, 1707
MspA1I CMGCKG 1 cut(s) 554
MspCI CTTAAG 1 cut(s) 1913
MspI CCGG 3 cut(s) 753, 1568, 1839
MspR9I CCNGG 1 cut(s) 753
MunI CAATTG 2 cut(s) 152, 182
Mva1269I GAATGC 1 cut(s) 1139
MwoI GCNNNNNNNGC 1 cut(s) 1070
NciI CCSGG 1 cut(s) 753
NdeI CATATG 1 cut(s) 595
NdeII GATC 6 cut(s) 61, 253, 793, 1233, 1400, 1492
NlaIII CATG 6 cut(s) 139, 294, 491, 1105, 1491, 1512
NlaIV GGNNCC 1 cut(s) 296
NmeAIII GCCGAG 1 cut(s) 1798
NmuCI GTSAC 1 cut(s) 1572
NsbI TGCGCA 1 cut(s) 1676
NspI RCATGY 1 cut(s) 1491
PacI TTAATTAA 1 cut(s) 1971
PaeR7I CTCGAG 1 cut(s) 390
PciI ACATGT 1 cut(s) 1487
PctI GAATGC 1 cut(s) 1139
PfeI GAWTC 3 cut(s) 238, 811, 1808
PflFI GACNNNGTC 1 cut(s) 464
PkrI GCNGC 3 cut(s) 834, 1098, 1733
Ple19I CGATCG 1 cut(s) 1236
PleI GAGTC 2 cut(s) 35, 1125
PmaCI CACGTG 1 cut(s) 1169
PmlI CACGTG 1 cut(s) 1169
PpsI GAGTC 2 cut(s) 35, 1125
Ppu21I YACGTR 2 cut(s) 1169, 1798
PscI ACATGT 1 cut(s) 1487
PshBI ATTAAT 1 cut(s) 1670
PspCI CACGTG 1 cut(s) 1169
PspEI GGTNACC 1 cut(s) 140
PspN4I GGNNCC 1 cut(s) 296
PspPI GGNCC 3 cut(s) 295, 590, 877
PspXI VCTCGAGB 1 cut(s) 390
PsyI GACNNNGTC 1 cut(s) 464
PvuI CGATCG 1 cut(s) 1236
PvuII CAGCTG 1 cut(s) 554
RsaI GTAC 7 cut(s) 1002, 1359, 1486, 1621, 1633, 1800, 1830
RsaNI GTAC 7 cut(s) 1001, 1358, 1485, 1620, 1632, 1799, 1829
RseI CAYNNNNRTG 2 cut(s) 353, 1707
SatI GCNGC 3 cut(s) 833, 1097, 1732
Sau3AI GATC 6 cut(s) 61, 253, 793, 1233, 1400, 1492
Sau96I GGNCC 3 cut(s) 295, 590, 877
ScaI AGTACT 2 cut(s) 1002, 1359
SchI GAGTC 2 cut(s) 35, 1126
ScrFI CCNGG 1 cut(s) 753
SduI GDGCHC 1 cut(s) 397
SfaNI GCATC 5 cut(s) 100, 254, 289, 354, 1831
Sfr274I CTCGAG 1 cut(s) 390
SinI GGWCC 1 cut(s) 295
SlaI CTCGAG 1 cut(s) 390
SmiMI CAYNNNNRTG 2 cut(s) 353, 1707
SmlI CTYRAG 2 cut(s) 390, 1913
SmoI CTYRAG 2 cut(s) 390, 1913
SpeI ACTAGT 1 cut(s) 397
SsiI CCGC 1 cut(s) 1732
SspI AATATT 3 cut(s) 917, 1110, 1586
SspMI CTAG 9 cut(s) 398, 645, 780, 846, 978, 998, 1004, 1755, 1763
StyD4I CCNGG 1 cut(s) 751
TaaI ACNGT 3 cut(s) 573, 1354, 1783
TaiI ACGT 5 cut(s) 426, 1171, 1770, 1800, 1960
TaqI TCGA 5 cut(s) 64, 391, 731, 1533, 1906
TatI WGTACW 5 cut(s) 1000, 1357, 1484, 1619, 1828
TauI GCSGC 1 cut(s) 1734
TfiI GAWTC 3 cut(s) 238, 811, 1808
TscAI CASTG 4 cut(s) 35, 202, 355, 1689
TseFI GTSAC 1 cut(s) 1572
TseI GCWGC 2 cut(s) 832, 1096
Tsp45I GTSAC 1 cut(s) 1572
TspDTI ATGAA 6 cut(s) 124, 612, 644, 774, 926, 1628
TspGWI ACGGA 3 cut(s) 122, 242, 325
TspRI CASTG 4 cut(s) 35, 202, 355, 1689
Tth111I GACNNNGTC 1 cut(s) 464
Vha464I CTTAAG 1 cut(s) 1913
VpaK11BI GGWCC 1 cut(s) 295
VspI ATTAAT 1 cut(s) 1670
XceI RCATGY 1 cut(s) 1491
XcmI CCANNNNNNNNNTGG 2 cut(s) 52, 505
XhoI CTCGAG 1 cut(s) 390
XmiI GTMKAC 2 cut(s) 39, 125
XspI CTAG 9 cut(s) 398, 645, 780, 846, 978, 998, 1004, 1755, 1763
ZrmI AGTACT 2 cut(s) 1002, 1359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.