transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 122 |
| AatII | GACGTC | 1 cut(s) | 81 |
| AclWI | GGATC | 3 cut(s) | 30, 146, 159 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 1 cut(s) | 168 |
| AcyI | GRCGYC | 1 cut(s) | 78 |
| AfaI | GTAC | 1 cut(s) | 381 |
| AflII | CTTAAG | 1 cut(s) | 260 |
| AflIII | ACRYGT | 2 cut(s) | 219, 330 |
| AgsI | TTSAA | 2 cut(s) | 68, 284 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 32, 64 |
| AluBI | AGCT | 3 cut(s) | 121, 160, 259 |
| AluI | AGCT | 3 cut(s) | 121, 160, 259 |
| Alw21I | GWGCWC | 1 cut(s) | 199 |
| AlwI | GGATC | 3 cut(s) | 30, 146, 159 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 2 cut(s) | 242, 374 |
| ApoI | RAATTY | 1 cut(s) | 168 |
| AspS9I | GGNCC | 1 cut(s) | 393 |
| AsuHPI | GGTGA | 1 cut(s) | 302 |
| AvaII | GGWCC | 1 cut(s) | 393 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BamHI | GGATCC | 1 cut(s) | 151 |
| BbsI | GAAGAC | 2 cut(s) | 272, 408 |
| Bbv12I | GWGCWC | 1 cut(s) | 199 |
| BbvI | GCAGC | 2 cut(s) | 229, 361 |
| BccI | CCATC | 1 cut(s) | 493 |
| BceAI | ACGGC | 1 cut(s) | 362 |
| BfaI | CTAG | 2 cut(s) | 192, 344 |
| BfrI | CTTAAG | 1 cut(s) | 260 |
| BglII | AGATCT | 1 cut(s) | 448 |
| BisI | GCNGC | 2 cut(s) | 243, 375 |
| BlsI | GCNGC | 2 cut(s) | 244, 376 |
| Bme18I | GGWCC | 1 cut(s) | 393 |
| BmgT120I | GGNCC | 1 cut(s) | 393 |
| BmiI | GGNNCC | 2 cut(s) | 137, 153 |
| BmsI | GCATC | 2 cut(s) | 92, 361 |
| BpiI | GAAGAC | 2 cut(s) | 272, 408 |
| Bpu10I | CCTNAGC | 1 cut(s) | 156 |
| BpuEI | CTTGAG | 1 cut(s) | 231 |
| Bsa29I | ATCGAT | 1 cut(s) | 369 |
| BsaHI | GRCGYC | 1 cut(s) | 78 |
| BsaJI | CCNNGG | 3 cut(s) | 25, 147, 396 |
| BseCI | ATCGAT | 1 cut(s) | 369 |
| BseDI | CCNNGG | 3 cut(s) | 25, 147, 396 |
| BseRI | GAGGAG | 1 cut(s) | 128 |
| BseXI | GCAGC | 2 cut(s) | 229, 361 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BshVI | ATCGAT | 1 cut(s) | 369 |
| BsiHKAI | GWGCWC | 1 cut(s) | 199 |
| BsiSI | CCGG | 1 cut(s) | 89 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp1286I | GDGCHC | 1 cut(s) | 199 |
| Bsp143I | GATC | 3 cut(s) | 35, 151, 448 |
| Bsp19I | CCATGG | 1 cut(s) | 147 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspDI | ATCGAT | 1 cut(s) | 369 |
| BspLI | GGNNCC | 2 cut(s) | 137, 153 |
| BspPI | GGATC | 3 cut(s) | 30, 146, 159 |
| BspTI | CTTAAG | 1 cut(s) | 260 |
| BssECI | CCNNGG | 3 cut(s) | 25, 147, 396 |
| BssMI | GATC | 3 cut(s) | 35, 151, 448 |
| BssNI | GRCGYC | 1 cut(s) | 78 |
| BssT1I | CCWWGG | 2 cut(s) | 25, 147 |
| Bst4CI | ACNGT | 1 cut(s) | 384 |
| BstACI | GRCGYC | 1 cut(s) | 78 |
| BstAFI | CTTAAG | 1 cut(s) | 260 |
| BstC8I | GCNNGC | 1 cut(s) | 423 |
| BstDEI | CTNAG | 2 cut(s) | 156, 452 |
| BstDSI | CCRYGG | 1 cut(s) | 147 |
| BstKTI | GATC | 3 cut(s) | 38, 154, 451 |
| BstMBI | GATC | 3 cut(s) | 35, 151, 448 |
| BstNSI | RCATGY | 2 cut(s) | 223, 334 |
| BstV1I | GCAGC | 2 cut(s) | 229, 361 |
| BstV2I | GAAGAC | 2 cut(s) | 272, 408 |
| BstX2I | RGATCY | 3 cut(s) | 35, 151, 448 |
| BstYI | RGATCY | 3 cut(s) | 35, 151, 448 |
| Bsu15I | ATCGAT | 1 cut(s) | 369 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BsuTUI | ATCGAT | 1 cut(s) | 369 |
| BtgI | CCRYGG | 1 cut(s) | 147 |
| BtgZI | GCGATG | 1 cut(s) | 69 |
| Cac8I | GCNNGC | 1 cut(s) | 423 |
| Cfr13I | GGNCC | 1 cut(s) | 393 |
| ClaI | ATCGAT | 1 cut(s) | 369 |
| Csp6I | GTAC | 1 cut(s) | 380 |
| CviAII | CATG | 6 cut(s) | 102, 127, 148, 220, 322, 331 |
| CviJI | RGCY | 7 cut(s) | 5, 106, 121, 136, 160, 259, 459 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 106, 121, 136, 160, 259, 459 |
| CviQI | GTAC | 1 cut(s) | 380 |
| DdeI | CTNAG | 2 cut(s) | 156, 452 |
| DpnI | GATC | 3 cut(s) | 37, 153, 450 |
| DpnII | GATC | 3 cut(s) | 35, 151, 448 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 122 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 122 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eco130I | CCWWGG | 2 cut(s) | 25, 147 |
| Eco47I | GGWCC | 1 cut(s) | 393 |
| EcoT14I | CCWWGG | 2 cut(s) | 25, 147 |
| ErhI | CCWWGG | 2 cut(s) | 25, 147 |
| FaeI | CATG | 6 cut(s) | 105, 130, 151, 223, 325, 334 |
| FatI | CATG | 6 cut(s) | 101, 126, 147, 219, 321, 330 |
| Fnu4HI | GCNGC | 2 cut(s) | 243, 375 |
| Fsp4HI | GCNGC | 2 cut(s) | 243, 375 |
| FspBI | CTAG | 2 cut(s) | 192, 344 |
| GluI | GCNGC | 2 cut(s) | 243, 375 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HapII | CCGG | 1 cut(s) | 89 |
| Hin1I | GRCGYC | 1 cut(s) | 78 |
| Hin1II | CATG | 6 cut(s) | 105, 130, 151, 223, 325, 334 |
| HinfI | GANTC | 4 cut(s) | 48, 185, 268, 472 |
| HpaII | CCGG | 1 cut(s) | 89 |
| HphI | GGTGA | 1 cut(s) | 302 |
| Hpy188I | TCNGA | 4 cut(s) | 166, 184, 397, 439 |
| Hpy188III | TCNNGA | 1 cut(s) | 476 |
| Hpy99I | CGWCG | 1 cut(s) | 83 |
| HpyAV | CCTTC | 1 cut(s) | 199 |
| HpyCH4III | ACNGT | 1 cut(s) | 384 |
| HpyCH4IV | ACGT | 1 cut(s) | 78 |
| HpyCH4V | TGCA | 6 cut(s) | 111, 275, 321, 425, 494, 504 |
| HpyF3I | CTNAG | 2 cut(s) | 156, 452 |
| HpySE526I | ACGT | 1 cut(s) | 78 |
| Hsp92I | GRCGYC | 1 cut(s) | 78 |
| Hsp92II | CATG | 6 cut(s) | 105, 130, 151, 223, 325, 334 |
| Kzo9I | GATC | 3 cut(s) | 35, 151, 448 |
| LmnI | GCTCC | 1 cut(s) | 141 |
| LpnPI | CCDG | 5 cut(s) | 87, 102, 107, 131, 269 |
| Lsp1109I | GCAGC | 2 cut(s) | 229, 361 |
| LweI | GCATC | 2 cut(s) | 92, 361 |
| MaeI | CTAG | 2 cut(s) | 192, 344 |
| MaeII | ACGT | 1 cut(s) | 78 |
| MalI | GATC | 3 cut(s) | 37, 153, 450 |
| MboI | GATC | 3 cut(s) | 35, 151, 448 |
| MboII | GAAGA | 4 cut(s) | 45, 272, 413, 458 |
| MflI | RGATCY | 3 cut(s) | 35, 151, 448 |
| MhlI | GDGCHC | 1 cut(s) | 199 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 1 cut(s) | 168 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MnlI | CCTC | 5 cut(s) | 23, 149, 199, 258, 391 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 2 cut(s) | 261, 386 |
| MslI | CAYNNNNRTG | 1 cut(s) | 106 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 1 cut(s) | 121 |
| MspCI | CTTAAG | 1 cut(s) | 260 |
| MspI | CCGG | 1 cut(s) | 89 |
| NcoI | CCATGG | 1 cut(s) | 147 |
| NdeII | GATC | 3 cut(s) | 35, 151, 448 |
| NlaIII | CATG | 6 cut(s) | 105, 130, 151, 223, 325, 334 |
| NlaIV | GGNNCC | 2 cut(s) | 137, 153 |
| NspI | RCATGY | 2 cut(s) | 223, 334 |
| PciI | ACATGT | 2 cut(s) | 219, 330 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 375 |
| PfeI | GAWTC | 4 cut(s) | 48, 185, 268, 472 |
| PkrI | GCNGC | 2 cut(s) | 244, 376 |
| PscI | ACATGT | 2 cut(s) | 219, 330 |
| PspN4I | GGNNCC | 2 cut(s) | 137, 153 |
| PspPI | GGNCC | 1 cut(s) | 393 |
| PsuI | RGATCY | 3 cut(s) | 35, 151, 448 |
| PvuII | CAGCTG | 1 cut(s) | 121 |
| RsaI | GTAC | 1 cut(s) | 381 |
| RsaNI | GTAC | 1 cut(s) | 380 |
| RseI | CAYNNNNRTG | 1 cut(s) | 106 |
| SaqAI | TTAA | 2 cut(s) | 261, 386 |
| SatI | GCNGC | 2 cut(s) | 243, 375 |
| Sau3AI | GATC | 3 cut(s) | 35, 151, 448 |
| Sau96I | GGNCC | 1 cut(s) | 393 |
| SduI | GDGCHC | 1 cut(s) | 199 |
| SetI | ASST | 7 cut(s) | 76, 81, 123, 162, 261, 292, 395 |
| SfaNI | GCATC | 2 cut(s) | 92, 361 |
| SinI | GGWCC | 1 cut(s) | 393 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 106 |
| SmlI | CTYRAG | 2 cut(s) | 246, 260 |
| SmoI | CTYRAG | 2 cut(s) | 246, 260 |
| Sse9I | AATT | 1 cut(s) | 168 |
| SspMI | CTAG | 2 cut(s) | 192, 344 |
| StyI | CCWWGG | 2 cut(s) | 25, 147 |
| TaaI | ACNGT | 1 cut(s) | 384 |
| TaiI | ACGT | 1 cut(s) | 81 |
| TaqI | TCGA | 2 cut(s) | 355, 369 |
| TasI | AATT | 1 cut(s) | 168 |
| TfiI | GAWTC | 4 cut(s) | 48, 185, 268, 472 |
| Tru1I | TTAA | 2 cut(s) | 261, 386 |
| Tru9I | TTAA | 2 cut(s) | 261, 386 |
| TseI | GCWGC | 2 cut(s) | 242, 374 |
| TspDTI | ATGAA | 6 cut(s) | 111, 296, 338, 404, 459, 485 |
| Vha464I | CTTAAG | 1 cut(s) | 260 |
| VpaK11BI | GGWCC | 1 cut(s) | 393 |
| XapI | RAATTY | 1 cut(s) | 168 |
| XceI | RCATGY | 2 cut(s) | 223, 334 |
| XspI | CTAG | 2 cut(s) | 192, 344 |
| ZraI | GACGTC | 1 cut(s) | 79 |