Rw2G043670

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000562
Physical Location & Seq
Reverse (-)
70163431 .. 70166356
2926 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G043670.1

Sequence Viewer

Length: 2001 bp
ATGGCTGAGGGAGATAGCTCCATTTCCTCTTCCTTCACACCTAGAAGTTCTGAGAGTGATTTAAACTCAAACCAACGTCTATGTTCAGTGTTACTCAATGAGTTCAACTATATATCTTGGTCAAGAGCGATCATTCTTACTCTTGGAGGAAGATCCAAGCTCGATTACATTAATGGTGACATTCAAATCCCACCACCTCTATCCGCCGATTATGAAGCATGGCTCAACAAAGATCAGCTAGTCATGTCAAGGCTCCTAAACTCTATGGAGCCATCTGTTGCTGCCATCTTTAGCTATTTTGAGTCTTCTCAGCATATTTGGAAAGCTGTGAAAGAGATGTATGGTAACCAAAATAATTGTGCCAGAATTTTTCAACTTCAAAGAGACATCACCAGTCCCAAACAAGGAGCAAACTCTTTTGTTCATCATCTTGACAATATGAAAAGCATGTGGACCGAGGTAAATATCTACAGACCTCACACCACAGATGCAACTATTCTACAAAAAAGGCATGAAGAAGATAAAGTGTTCCAGCTCCTAGCTAGTTTAGGACCTGAGTATGAAAATCTTTGCAGCCACATACTCATGAGTCCTGAACTACCATCCTTGACCAGCATCTGCTCTACCATTCAGCGTGAAGAGACTAGGAGGAAGGTCATGAATGAAGATTCAAAGATATCTGCATCTGAAGCTAGAGCTTTTGCAAGTGATCTTAAGCTAGCTGAGAAGAAACCTTACAGAGGTAAACGCCCTGATCTCCACTGTACTTATTGTGACCATCCCAGACATCTCAGAGAGAGGTGTTGGATACTGCATCCTGAACTCAAACCCAAATTTGAGAAGCAAGCCAAAGATACCAAGTCCTTTCCAAAAAATCATGGCCATAAGGCAAGTCATGTTGCTTCTTCCACTGAGGGATTAATAAACTTCACTGCAAATCCAGCTGCATTGATAAATGAATTTGCAGCCTACCTCCAACTGAAGCAAGGAAATGAACAAGAGGCTATTTCTGAAGACTCAACAGTCTTACTTGGAAAATTTGCTGGTTTCCTAGCAGAAGCAGATGGAATAACTCAGCATGATATGCCAGGTATCTTAAAAGTTTTCTCTACAGCCTTACATAGAAAAAATAGGGACCTCCTTGAAAAAACAAGATCAATAATGTTTCAAATGAATGTCCCTAAGAGATTCTGGTCTCAAGGAGTACTCACTGCTGCATACCTCATAAACAAATTGCCAAGTAGAGTCCTTAATTTCAAATCACCCTATGAAGTTTTGAAAGGAAGAAAACTTGACATTACACACCTCAAGGTCTTTGGTTGTGTCTGCTTTGTGCATGTACAATCTGCTCACAGGGATAAATTAGATCCCAAGGCTACAAAGTACATCTTTTTGGGATATTCATCCACTCAGAAGGGATATAAGTGTTTTGATCCAAACACGAAGAACCTGTCTGTATCAAGGGATGTTCGATTTGTTGAAAACGTTCCTTTCTTGAGTGCTCTTGATTCCTCTACTCAAGGGGAGTTCTTTCTTGATTTCCTTTCTTTGCCAATTTTTGGATCAACCTTAGAGGATAGTAGAACCCCTCAGTTGGAATTACCAAGAGATGATGTTGCGATACAACAAATGGAAACAGGTCTCACTGGTCTAAACGACAATGATGACTATCAAAATGATGTCCTTGATGACCCAGAAGAAGTTATTCCAGAACCAGGACAAGCTATTCCCATTCCAAGAAGGTATCCTACTCGAACTAGGAGACCTCCTCTCAAGCTGCAAGACTGCAAAGTGTACACCACTAAGTATCCCTTGGAGAACTTTGTATCTTACAACAAGTTCTCAAAGGCTCATGCTGCTTTCCTCTCTGAAATCTCTAGTGCAACAGAACCTAAAAGCTATCAAGAAGCCAGACAACAAAGTGTTTGGACTGCTGCTATGAAAGAAGAACTAAGAGCTTTGGATGAAAATCAAACTTGGAGCGTGGTTAAACTTCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotran_gag_2 Retrotran_gag_3 rve

Protein Analysis

666

Amino Acids

75.81

Weight (kDa)

7.6

Isoelectric Point (pI)

43.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_3 PF14244 26 - 64 3.4e-12 gag-polypeptide of LTR copia-type
Retrotran_gag_2 PF14223 50 - 220 1.4e-15 gag-polypeptide of LTR copia-type
SH3_retrovirus PF25597 441 - 498 1.4e-25 Retroviral polymerase SH3-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000562)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g17331 FvH4_3g36541
malus_domestica MD07G1078600.v1.1 MD10G1237700.v1.1 MD10G1333400.v1.1 MD11G1102200.v1.1 MD13G1138400.v1.1 MD14G1033400.v1.1 MD15G1053300.v1.1
prunus_persica Prupe.1G465400_v2.0.a1 Prupe.3G136000_v2.0.a1 Prupe.7G119900_v2.0.a1
pyrus_communis pycom01g04630 pycom03g13050 pycom04g21190 pycom05g04910 pycom05g05510 pycom08g15850 pycom09g15040 pycom1094g00010 pycom11g02000 pycom12g06150 pycom13g24110 pycom13g24910 pycom14g00050 pycom15g21970 pycom15g35170 pycom15g35180 pycom16g14620 pycom16g14630 pycom808g00110
rosa_chinensis RchiOBHm_Chr1g0322851 RchiOBHm_Chr1g0365941 RchiOBHm_Chr3g0453341 RchiOBHm_Chr4g0388371 RchiOBHm_Chr4g0394021 RchiOBHm_Chr5g0013181 RchiOBHm_Chr6g0261721 RchiOBHm_Chr6g0261731 RchiOBHm_Chr7g0188861 RchiOBHm_Chr7g0192331 RchiOBHm_Chr7g0231721
rosa_multiflora Rmu_sc0002521.1_g000006 Rmu_sc0003255.1_g000026 Rmu_sc0004191.1_g000036 Rmu_sc0004414.1_g000014 Rmu_sc0005670.1_g000006 Rmu_sc0006081.1_g000001 Rmu_sc0007215.1_g000004 Rmu_sc0010088.1_g000010 Rmu_sc0020285.1_g000003 Rmu_sc0026896.1_g000002 Rmu_ssc0000019.1_g000029
rosa_roxburghii Rroxscaffold_3G00224890 Rroxscaffold_6G00400640 Rroxscaffold_7G00176590 Rroxscaffold_7G00189230
rosa_samantha Rh4BG046700
rosa_wichuraiana Rw1G012690 Rw1G031370 Rw2G042180 Rw2G043670 Rw2G046240 Rw2G049890 Rw2G050760 Rw2G051280 Rw2G053590 Rw3G007590 Rw3G026850 Rw4G001540 Rw4G009760 Rw4G019270 Rw5G000720 Rw5G005620 Rw5G041560 Rw6G007370 Rw6G009830 Rw6G015360 Rw6G031160 Rw7G004930 Rw7G011010 Rw7G024230 Rw7G028240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1022
AccB7I CCANNNNNTGG 1 cut(s) 1559
AciI CCGC 1 cut(s) 204
AclI AACGTT 1 cut(s) 1485
AclWI GGATC 4 cut(s) 147, 1361, 1427, 1570
AcoI YGGCCR 1 cut(s) 880
AcsI RAATTY 4 cut(s) 366, 833, 959, 1037
AcuI CTGAAG 3 cut(s) 708, 1001, 1032
AfaI GTAC 5 cut(s) 766, 1206, 1341, 1385, 1796
AfiI CCNNNNNNNGG 5 cut(s) 404, 740, 1559, 1594, 1715
AflII CTTAAG 1 cut(s) 713
AjnI CCWGG 2 cut(s) 1087, 1714
Alw21I GWGCWC 1 cut(s) 1504
Alw26I GTCTC 5 cut(s) 378, 635, 1200, 1646, 1756
AlwI GGATC 4 cut(s) 147, 1361, 1427, 1570
AlwNI CAGNNNCTG 1 cut(s) 618
AoxI GGCC 1 cut(s) 880
ApeKI GCWGC 8 cut(s) 281, 573, 944, 965, 1214, 1777, 1856, 1934
ApoI RAATTY 4 cut(s) 366, 833, 959, 1037
ArsI GACNNNNNNTTYG 2 cut(s) 1436, 1468
AseI ATTAAT 2 cut(s) 171, 920
Asp700I GAANNNNTTC 2 cut(s) 1485, 1704
AspS9I GGNCC 3 cut(s) 453, 551, 1135
AsuHPI GGTGA 3 cut(s) 188, 382, 1254
AsuNHI GCTAGC 1 cut(s) 718
AvaII GGWCC 3 cut(s) 453, 551, 1135
BalI TGGCCA 1 cut(s) 882
BarI GAAGNNNNNNTAC 4 cut(s) 719, 751, 1732, 1764
BbsI GAAGAC 2 cut(s) 297, 1020
Bbv12I GWGCWC 1 cut(s) 1504
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 8 cut(s) 268, 585, 931, 977, 1201, 1764, 1843, 1921
BccI CCATC 5 cut(s) 280, 293, 610, 786, 1058
BciT130I CCWGG 2 cut(s) 1089, 1716
BciVI GTATCC 3 cut(s) 801, 1755, 1818
BcoDI GTCTC 5 cut(s) 378, 635, 1200, 1646, 1756
BfmI CTRYAG 2 cut(s) 469, 1110
BfrI CTTAAG 1 cut(s) 713
BfuI GTATCC 3 cut(s) 801, 1755, 1818
BisI GCNGC 8 cut(s) 282, 574, 945, 966, 1215, 1778, 1857, 1935
BlsI GCNGC 8 cut(s) 283, 575, 946, 967, 1216, 1779, 1858, 1936
BmcAI AGTACT 1 cut(s) 1206
Bme1390I CCNGG 2 cut(s) 1089, 1716
Bme18I GGWCC 3 cut(s) 453, 551, 1135
BmgT120I GGNCC 3 cut(s) 453, 551, 1135
BmiI GGNNCC 3 cut(s) 254, 270, 1136
BmrFI CCNGG 2 cut(s) 1089, 1716
BmsI GCATC 4 cut(s) 478, 624, 692, 823
BmtI GCTAGC 1 cut(s) 722
BpiI GAAGAC 2 cut(s) 297, 1020
BplI GAGNNNNNCTC 2 cut(s) 1753, 1785
Bpu10I CCTNAGC 1 cut(s) 6
BpuEI CTTGAG 5 cut(s) 1182, 1292, 1503, 1516, 1757
BsaBI GATNNNNATC 3 cut(s) 1402, 1668, 1968
BsaI GGTCTC 3 cut(s) 1200, 1646, 1756
BsaJI CCNNGG 3 cut(s) 456, 1371, 1812
Bsc4I CCNNNNNNNGG 5 cut(s) 404, 740, 1559, 1594, 1715
Bse1I ACTGG 2 cut(s) 393, 1651
Bse8I GATNNNNATC 3 cut(s) 1402, 1668, 1968
BseBI CCWGG 2 cut(s) 1089, 1716
BseDI CCNNGG 3 cut(s) 456, 1371, 1812
BseGI GGATG 6 cut(s) 602, 778, 814, 1403, 1471, 1969
BseJI GATNNNNATC 3 cut(s) 1402, 1668, 1968
BseLI CCNNNNNNNGG 5 cut(s) 404, 740, 1559, 1594, 1715
BseMII CTCAG 9 cut(s) 42, 323, 546, 714, 805, 903, 1088, 1424, 1604
BseNI ACTGG 2 cut(s) 393, 1651
BseRI GAGGAG 1 cut(s) 1758
BseXI GCAGC 8 cut(s) 268, 585, 931, 977, 1201, 1764, 1843, 1921
BshFI GGCC 1 cut(s) 882
BsiHKAI GWGCWC 1 cut(s) 1504
BslFI GGGAC 3 cut(s) 381, 1148, 1163
BslI CCNNNNNNNGG 5 cut(s) 404, 740, 1559, 1594, 1715
BsmAI GTCTC 5 cut(s) 378, 635, 1200, 1646, 1756
BsmFI GGGAC 3 cut(s) 381, 1148, 1163
BsnI GGCC 1 cut(s) 882
Bso31I GGTCTC 3 cut(s) 1200, 1646, 1756
Bsp1286I GDGCHC 1 cut(s) 1504
Bsp1407I TGTACA 2 cut(s) 1339, 1794
Bsp143I GATC 9 cut(s) 129, 152, 232, 709, 754, 1154, 1366, 1432, 1562
BspACI CCGC 1 cut(s) 204
BspANI GGCC 1 cut(s) 882
BspCNI CTCAG 9 cut(s) 43, 322, 547, 715, 804, 904, 1087, 1423, 1603
BspHI TCATGA 2 cut(s) 585, 657
BspLI GGNNCC 3 cut(s) 254, 270, 1136
BspOI GCTAGC 1 cut(s) 722
BspPI GGATC 4 cut(s) 147, 1361, 1427, 1570
BspTI CTTAAG 1 cut(s) 713
BspTNI GGTCTC 3 cut(s) 1200, 1646, 1756
BsrGI TGTACA 2 cut(s) 1339, 1794
BsrI ACTGG 2 cut(s) 393, 1651
BssECI CCNNGG 3 cut(s) 456, 1371, 1812
BssMI GATC 9 cut(s) 129, 152, 232, 709, 754, 1154, 1366, 1432, 1562
BssT1I CCWWGG 2 cut(s) 1371, 1812
Bst2UI CCWGG 2 cut(s) 1089, 1716
Bst4CI ACNGT 2 cut(s) 764, 1024
Bst6I CTCTTC 2 cut(s) 34, 633
BstAFI CTTAAG 1 cut(s) 713
BstAPI GCANNNNNTGC 1 cut(s) 1084
BstAUI TGTACA 2 cut(s) 1339, 1794
BstC8I GCNNGC 2 cut(s) 720, 846
BstEII GGTNACC 1 cut(s) 344
BstENI CCTNNNNNAGG 1 cut(s) 738
BstF5I GGATG 6 cut(s) 602, 778, 814, 1403, 1471, 1969
BstKTI GATC 9 cut(s) 132, 155, 235, 712, 757, 1157, 1369, 1435, 1565
BstMAI GTCTC 5 cut(s) 378, 635, 1200, 1646, 1756
BstMBI GATC 9 cut(s) 129, 152, 232, 709, 754, 1154, 1366, 1432, 1562
BstMWI GCNNNNNNNGC 4 cut(s) 689, 941, 1084, 1856
BstNI CCWGG 2 cut(s) 1089, 1716
BstNSI RCATGY 2 cut(s) 451, 1340
BstPI GGTNACC 1 cut(s) 344
BstSCI CCNGG 2 cut(s) 1087, 1714
BstSFI CTRYAG 2 cut(s) 469, 1110
BstV1I GCAGC 8 cut(s) 268, 585, 931, 977, 1201, 1764, 1843, 1921
BstV2I GAAGAC 2 cut(s) 297, 1020
BstX2I RGATCY 2 cut(s) 152, 1366
BstYI RGATCY 2 cut(s) 152, 1366
BsuI GTATCC 3 cut(s) 801, 1755, 1818
BsuRI GGCC 1 cut(s) 882
BtsCI GGATG 6 cut(s) 602, 778, 814, 1403, 1471, 1969
BtsI GCAGTG 2 cut(s) 930, 1209
BtsIMutI CAGTG 6 cut(s) 93, 760, 909, 930, 1209, 1644
Cac8I GCNNGC 2 cut(s) 720, 846
CaiI CAGNNNCTG 1 cut(s) 618
CciI TCATGA 2 cut(s) 585, 657
Cfr13I GGNCC 3 cut(s) 453, 551, 1135
Csp6I GTAC 5 cut(s) 765, 1205, 1340, 1384, 1795
CviQI GTAC 5 cut(s) 765, 1205, 1340, 1384, 1795
DpnI GATC 9 cut(s) 131, 154, 234, 711, 756, 1156, 1368, 1434, 1564
DpnII GATC 9 cut(s) 129, 152, 232, 709, 754, 1154, 1366, 1432, 1562
DraI TTTAAA 1 cut(s) 63
DrdI GACNNNNNNGTC 1 cut(s) 1022
DseDI GACNNNNNNGTC 1 cut(s) 1022
EaeI YGGCCR 1 cut(s) 880
Eam1104I CTCTTC 2 cut(s) 34, 633
EarI CTCTTC 2 cut(s) 34, 633
EciI GGCGGA 1 cut(s) 193
Eco130I CCWWGG 2 cut(s) 1371, 1812
Eco31I GGTCTC 3 cut(s) 1200, 1646, 1756
Eco32I GATATC 1 cut(s) 678
Eco47I GGWCC 3 cut(s) 453, 551, 1135
Eco57I CTGAAG 3 cut(s) 708, 1001, 1032
Eco91I GGTNACC 1 cut(s) 344
EcoNI CCTNNNNNAGG 1 cut(s) 738
EcoO109I RGGNCCY 2 cut(s) 551, 1135
EcoO65I GGTNACC 1 cut(s) 344
EcoRII CCWGG 2 cut(s) 1087, 1714
EcoRV GATATC 1 cut(s) 678
EcoT14I CCWWGG 2 cut(s) 1371, 1812
ErhI CCWWGG 2 cut(s) 1371, 1812
FalI AAGNNNNNCTT 4 cut(s) 1373, 1405, 1796, 1828
FaqI GGGAC 3 cut(s) 381, 1148, 1163
Fnu4HI GCNGC 8 cut(s) 282, 574, 945, 966, 1215, 1778, 1857, 1935
FokI GGATG 6 cut(s) 589, 765, 801, 1390, 1478, 1976
Fsp4HI GCNGC 8 cut(s) 282, 574, 945, 966, 1215, 1778, 1857, 1935
GluI GCNGC 8 cut(s) 282, 574, 945, 966, 1215, 1778, 1857, 1935
HaeIII GGCC 1 cut(s) 882
HinfI GANTC 7 cut(s) 302, 589, 668, 1016, 1188, 1245, 1508
HphI GGTGA 3 cut(s) 188, 382, 1254
Hpy166II GTNNAC 4 cut(s) 453, 746, 1795, 1797
Hpy188I TCNGA 6 cut(s) 52, 688, 794, 1012, 1413, 1870
Hpy8I GTNNAC 4 cut(s) 453, 746, 1795, 1797
HpyAV CCTTC 4 cut(s) 43, 646, 1408, 1734
HpyCH4III ACNGT 2 cut(s) 764, 1024
HpyCH4IV ACGT 2 cut(s) 76, 1485
HpyF10VI GCNNNNNNNGC 4 cut(s) 689, 941, 1084, 1856
HpySE526I ACGT 2 cut(s) 76, 1485
Kzo9I GATC 9 cut(s) 129, 152, 232, 709, 754, 1154, 1366, 1432, 1562
LmnI GCTCC 6 cut(s) 23, 258, 268, 407, 540, 1980
Lsp1109I GCAGC 8 cut(s) 268, 585, 931, 977, 1201, 1764, 1843, 1921
LweI GCATC 4 cut(s) 478, 624, 692, 823
MaeII ACGT 2 cut(s) 76, 1485
MaeIII GTNAC 4 cut(s) 90, 176, 344, 773
MalI GATC 9 cut(s) 131, 154, 234, 711, 756, 1156, 1368, 1434, 1564
MboI GATC 9 cut(s) 129, 152, 232, 709, 754, 1154, 1366, 1432, 1562
MflI RGATCY 2 cut(s) 152, 1366
MhlI GDGCHC 1 cut(s) 1504
MlsI TGGCCA 1 cut(s) 882
MluNI TGGCCA 1 cut(s) 882
MlyI GAGTC 4 cut(s) 311, 598, 1010, 1254
MmeI TCCRAC 3 cut(s) 785, 1000, 1575
Mox20I TGGCCA 1 cut(s) 882
MroXI GAANNNNTTC 2 cut(s) 1485, 1704
MscI TGGCCA 1 cut(s) 882
MseI TTAA 8 cut(s) 62, 171, 714, 920, 1097, 1251, 1989, 1999
MslI CAYNNNNRTG 1 cut(s) 584
Msp20I TGGCCA 1 cut(s) 882
MspA1I CMGCKG 1 cut(s) 944
MspCI CTTAAG 1 cut(s) 713
MspR9I CCNGG 2 cut(s) 1089, 1716
MvaI CCWGG 2 cut(s) 1089, 1716
MwoI GCNNNNNNNGC 4 cut(s) 689, 941, 1084, 1856
NdeII GATC 9 cut(s) 129, 152, 232, 709, 754, 1154, 1366, 1432, 1562
NheI GCTAGC 1 cut(s) 718
NlaIV GGNNCC 3 cut(s) 254, 270, 1136
NmuCI GTSAC 2 cut(s) 176, 773
NspI RCATGY 2 cut(s) 451, 1340
PagI TCATGA 2 cut(s) 585, 657
PdmI GAANNNNTTC 2 cut(s) 1485, 1704
PfeI GAWTC 3 cut(s) 668, 1188, 1508
PflMI CCANNNNNTGG 1 cut(s) 1559
PkrI GCNGC 8 cut(s) 283, 575, 946, 967, 1216, 1779, 1858, 1936
PleI GAGTC 4 cut(s) 310, 597, 1010, 1253
PpsI GAGTC 4 cut(s) 310, 597, 1010, 1253
PpuMI RGGWCCY 2 cut(s) 551, 1135
PshBI ATTAAT 2 cut(s) 171, 920
Psp1406I AACGTT 1 cut(s) 1485
Psp5II RGGWCCY 2 cut(s) 551, 1135
Psp6I CCWGG 2 cut(s) 1087, 1714
PspEI GGTNACC 1 cut(s) 344
PspGI CCWGG 2 cut(s) 1087, 1714
PspN4I GGNNCC 3 cut(s) 254, 270, 1136
PspPI GGNCC 3 cut(s) 453, 551, 1135
PspPPI RGGWCCY 2 cut(s) 551, 1135
PstNI CAGNNNCTG 1 cut(s) 618
PsuI RGATCY 2 cut(s) 152, 1366
PvuII CAGCTG 1 cut(s) 944
RsaI GTAC 5 cut(s) 766, 1206, 1341, 1385, 1796
RsaNI GTAC 5 cut(s) 765, 1205, 1340, 1384, 1795
RseI CAYNNNNRTG 1 cut(s) 584
SaqAI TTAA 8 cut(s) 62, 171, 714, 920, 1097, 1251, 1989, 1999
SatI GCNGC 8 cut(s) 282, 574, 945, 966, 1215, 1778, 1857, 1935
Sau3AI GATC 9 cut(s) 129, 152, 232, 709, 754, 1154, 1366, 1432, 1562
Sau96I GGNCC 3 cut(s) 453, 551, 1135
ScaI AGTACT 1 cut(s) 1206
SchI GAGTC 4 cut(s) 311, 598, 1010, 1254
ScrFI CCNGG 2 cut(s) 1089, 1716
SduI GDGCHC 1 cut(s) 1504
SfaNI GCATC 4 cut(s) 478, 624, 692, 823
SfcI CTRYAG 2 cut(s) 469, 1110
SinI GGWCC 3 cut(s) 453, 551, 1135
SmiMI CAYNNNNRTG 1 cut(s) 584
SmlI CTYRAG 6 cut(s) 713, 1197, 1307, 1495, 1518, 1772
SmoI CTYRAG 6 cut(s) 713, 1197, 1307, 1495, 1518, 1772
SsiI CCGC 1 cut(s) 204
StyD4I CCNGG 2 cut(s) 1087, 1714
StyI CCWWGG 2 cut(s) 1371, 1812
TaaI ACNGT 2 cut(s) 764, 1024
TaiI ACGT 2 cut(s) 79, 1488
TaqI TCGA 3 cut(s) 162, 1471, 1753
TaqII GACCGA 1 cut(s) 470
TatI WGTACW 5 cut(s) 764, 1204, 1339, 1383, 1794
TfiI GAWTC 3 cut(s) 668, 1188, 1508
Tru1I TTAA 8 cut(s) 62, 171, 714, 920, 1097, 1251, 1989, 1999
Tru9I TTAA 8 cut(s) 62, 171, 714, 920, 1097, 1251, 1989, 1999
TscAI CASTG 6 cut(s) 93, 767, 916, 937, 1216, 1651
TseFI GTSAC 2 cut(s) 176, 773
TseI GCWGC 8 cut(s) 281, 573, 944, 965, 1214, 1777, 1856, 1934
Tsp45I GTSAC 2 cut(s) 176, 773
TspRI CASTG 6 cut(s) 93, 767, 916, 937, 1216, 1651
Van91I CCANNNNNTGG 1 cut(s) 1559
Vha464I CTTAAG 1 cut(s) 713
VpaK11BI GGWCC 3 cut(s) 453, 551, 1135
VspI ATTAAT 2 cut(s) 171, 920
XagI CCTNNNNNAGG 1 cut(s) 738
XapI RAATTY 4 cut(s) 366, 833, 959, 1037
XceI RCATGY 2 cut(s) 451, 1340
XmnI GAANNNNTTC 2 cut(s) 1485, 1704
ZrmI AGTACT 1 cut(s) 1206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.