gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 85, 217 |
| AcuI | CTGAAG | 1 cut(s) | 305 |
| AfaI | GTAC | 1 cut(s) | 263 |
| AgsI | TTSAA | 3 cut(s) | 31, 59, 158 |
| AluBI | AGCT | 3 cut(s) | 38, 203, 218 |
| AluI | AGCT | 3 cut(s) | 38, 203, 218 |
| Alw21I | GWGCWC | 2 cut(s) | 174, 293 |
| Alw44I | GTGCAC | 1 cut(s) | 289 |
| AlwI | GGATC | 2 cut(s) | 85, 217 |
| AoxI | GGCC | 2 cut(s) | 275, 325 |
| ApaLI | GTGCAC | 1 cut(s) | 289 |
| ApeKI | GCWGC | 1 cut(s) | 230 |
| AsuHPI | GGTGA | 1 cut(s) | 193 |
| BaeGI | GKGCMC | 1 cut(s) | 293 |
| BanII | GRGCYC | 1 cut(s) | 119 |
| Bbv12I | GWGCWC | 2 cut(s) | 174, 293 |
| BbvI | GCAGC | 1 cut(s) | 217 |
| BccI | CCATC | 1 cut(s) | 111 |
| BfaI | CTAG | 1 cut(s) | 219 |
| BglII | AGATCT | 2 cut(s) | 91, 280 |
| BisI | GCNGC | 1 cut(s) | 231 |
| BlsI | GCNGC | 1 cut(s) | 232 |
| BmsI | GCATC | 1 cut(s) | 89 |
| BpmI | CTGGAG | 1 cut(s) | 225 |
| Bse1I | ACTGG | 1 cut(s) | 322 |
| BseGI | GGATG | 1 cut(s) | 357 |
| BseMII | CTCAG | 1 cut(s) | 111 |
| BseNI | ACTGG | 1 cut(s) | 322 |
| BseSI | GKGCMC | 1 cut(s) | 293 |
| BseXI | GCAGC | 1 cut(s) | 217 |
| BsgI | GTGCAG | 1 cut(s) | 183 |
| BshFI | GGCC | 2 cut(s) | 277, 327 |
| BsiHKAI | GWGCWC | 2 cut(s) | 174, 293 |
| BsnI | GGCC | 2 cut(s) | 277, 327 |
| Bsp1286I | GDGCHC | 3 cut(s) | 119, 174, 293 |
| Bsp1407I | TGTACA | 1 cut(s) | 261 |
| Bsp143I | GATC | 4 cut(s) | 77, 91, 209, 280 |
| BspANI | GGCC | 2 cut(s) | 277, 327 |
| BspCNI | CTCAG | 1 cut(s) | 112 |
| BspPI | GGATC | 2 cut(s) | 85, 217 |
| BsrGI | TGTACA | 1 cut(s) | 261 |
| BsrI | ACTGG | 1 cut(s) | 322 |
| BssMI | GATC | 4 cut(s) | 77, 91, 209, 280 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 230 |
| BstAUI | TGTACA | 1 cut(s) | 261 |
| BstC8I | GCNNGC | 1 cut(s) | 66 |
| BstDEI | CTNAG | 1 cut(s) | 120 |
| BstF5I | GGATG | 1 cut(s) | 357 |
| BstKTI | GATC | 4 cut(s) | 80, 94, 212, 283 |
| BstMBI | GATC | 4 cut(s) | 77, 91, 209, 280 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 230 |
| BstSLI | GKGCMC | 1 cut(s) | 293 |
| BstV1I | GCAGC | 1 cut(s) | 217 |
| BstX2I | RGATCY | 3 cut(s) | 77, 91, 280 |
| BstYI | RGATCY | 3 cut(s) | 77, 91, 280 |
| BsuRI | GGCC | 2 cut(s) | 277, 327 |
| BtsCI | GGATG | 1 cut(s) | 357 |
| Cac8I | GCNNGC | 1 cut(s) | 66 |
| Csp6I | GTAC | 1 cut(s) | 262 |
| CviJI | RGCY | 6 cut(s) | 38, 117, 203, 218, 277, 327 |
| CviKI_1 | RGCY | 6 cut(s) | 38, 117, 203, 218, 277, 327 |
| CviQI | GTAC | 1 cut(s) | 262 |
| DdeI | CTNAG | 1 cut(s) | 120 |
| DpnI | GATC | 4 cut(s) | 79, 93, 211, 282 |
| DpnII | GATC | 4 cut(s) | 77, 91, 209, 280 |
| Eco24I | GRGCYC | 1 cut(s) | 119 |
| Eco57I | CTGAAG | 1 cut(s) | 305 |
| EcoT38I | GRGCYC | 1 cut(s) | 119 |
| FaiI | YATR | 8 cut(s) | 6, 23, 87, 137, 145, 191, 257, 323 |
| Fnu4HI | GCNGC | 1 cut(s) | 231 |
| FokI | GGATG | 1 cut(s) | 344 |
| FriOI | GRGCYC | 1 cut(s) | 119 |
| Fsp4HI | GCNGC | 1 cut(s) | 231 |
| FspBI | CTAG | 1 cut(s) | 219 |
| GluI | GCNGC | 1 cut(s) | 231 |
| GsuI | CTGGAG | 1 cut(s) | 225 |
| HaeIII | GGCC | 2 cut(s) | 277, 327 |
| HphI | GGTGA | 1 cut(s) | 193 |
| Hpy166II | GTNNAC | 2 cut(s) | 291, 302 |
| Hpy188I | TCNGA | 3 cut(s) | 82, 214, 285 |
| Hpy188III | TCNNGA | 1 cut(s) | 361 |
| Hpy8I | GTNNAC | 2 cut(s) | 291, 302 |
| HpyAV | CCTTC | 1 cut(s) | 138 |
| HpyCH4IV | ACGT | 1 cut(s) | 160 |
| HpyCH4V | TGCA | 5 cut(s) | 68, 147, 164, 233, 291 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 230 |
| HpyF3I | CTNAG | 1 cut(s) | 120 |
| HpySE526I | ACGT | 1 cut(s) | 160 |
| Kzo9I | GATC | 4 cut(s) | 77, 91, 209, 280 |
| LpnPI | CCDG | 5 cut(s) | 59, 132, 189, 291, 303 |
| Lsp1109I | GCAGC | 1 cut(s) | 217 |
| LweI | GCATC | 1 cut(s) | 89 |
| MaeI | CTAG | 1 cut(s) | 219 |
| MaeII | ACGT | 1 cut(s) | 160 |
| MaeIII | GTNAC | 1 cut(s) | 244 |
| MalI | GATC | 4 cut(s) | 79, 93, 211, 282 |
| MboI | GATC | 4 cut(s) | 77, 91, 209, 280 |
| MboII | GAAGA | 2 cut(s) | 56, 101 |
| MflI | RGATCY | 3 cut(s) | 77, 91, 280 |
| MhlI | GDGCHC | 3 cut(s) | 119, 174, 293 |
| MmeI | TCCRAC | 1 cut(s) | 328 |
| MnlI | CCTC | 3 cut(s) | 21, 200, 267 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 230 |
| NdeII | GATC | 4 cut(s) | 77, 91, 209, 280 |
| NmuCI | GTSAC | 1 cut(s) | 244 |
| PkrI | GCNGC | 1 cut(s) | 232 |
| PsuI | RGATCY | 3 cut(s) | 77, 91, 280 |
| RsaI | GTAC | 1 cut(s) | 263 |
| RsaNI | GTAC | 1 cut(s) | 262 |
| SatI | GCNGC | 1 cut(s) | 231 |
| Sau3AI | GATC | 4 cut(s) | 77, 91, 209, 280 |
| SduI | GDGCHC | 3 cut(s) | 119, 174, 293 |
| SetI | ASST | 6 cut(s) | 13, 40, 163, 183, 205, 220 |
| SfaNI | GCATC | 1 cut(s) | 89 |
| SspMI | CTAG | 1 cut(s) | 219 |
| TaiI | ACGT | 1 cut(s) | 163 |
| TatI | WGTACW | 1 cut(s) | 261 |
| TseFI | GTSAC | 1 cut(s) | 244 |
| TseI | GCWGC | 1 cut(s) | 230 |
| Tsp45I | GTSAC | 1 cut(s) | 244 |
| TspDTI | ATGAA | 3 cut(s) | 102, 124, 200 |
| VneI | GTGCAC | 1 cut(s) | 289 |
| XspI | CTAG | 1 cut(s) | 219 |