transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1562 |
| AciI | CCGC | 1 cut(s) | 1218 |
| AclWI | GGATC | 3 cut(s) | 1364, 1430, 1573 |
| AcoI | YGGCCR | 1 cut(s) | 841 |
| AcsI | RAATTY | 5 cut(s) | 45, 259, 920, 998, 1601 |
| AcuI | CTGAAG | 1 cut(s) | 534 |
| AfaI | GTAC | 6 cut(s) | 766, 1209, 1344, 1504, 1662, 1847 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 740, 1562, 1766 |
| AflII | CTTAAG | 1 cut(s) | 713 |
| AjnI | CCWGG | 4 cut(s) | 1048, 1561, 1765, 1863 |
| Alw21I | GWGCWC | 1 cut(s) | 20 |
| Alw26I | GTCTC | 5 cut(s) | 378, 401, 635, 1203, 1807 |
| AlwI | GGATC | 3 cut(s) | 1364, 1430, 1573 |
| AoxI | GGCC | 1 cut(s) | 841 |
| ApeKI | GCWGC | 5 cut(s) | 491, 573, 905, 926, 1828 |
| ApoI | RAATTY | 5 cut(s) | 45, 259, 920, 998, 1601 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1439, 1471 |
| AseI | ATTAAT | 1 cut(s) | 171 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 567, 1488 |
| AspS9I | GGNCC | 3 cut(s) | 551, 1138, 1249 |
| AsuHPI | GGTGA | 6 cut(s) | 68, 188, 382, 416, 1257, 1727 |
| AsuNHI | GCTAGC | 1 cut(s) | 718 |
| AvaII | GGWCC | 3 cut(s) | 551, 1138, 1249 |
| AxyI | CCTNAGG | 1 cut(s) | 1521 |
| BalI | TGGCCA | 1 cut(s) | 843 |
| BanII | GRGCYC | 1 cut(s) | 20 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 719, 751, 1783, 1815 |
| Bbv12I | GWGCWC | 1 cut(s) | 20 |
| BbvCI | CCTCAGC | 1 cut(s) | 6 |
| BbvI | GCAGC | 5 cut(s) | 503, 585, 892, 938, 1815 |
| BccI | CCATC | 7 cut(s) | 280, 293, 435, 610, 1019, 1681, 1728 |
| BciT130I | CCWGG | 4 cut(s) | 1050, 1563, 1767, 1865 |
| BciVI | GTATCC | 2 cut(s) | 1806, 1869 |
| BclI | TGATCA | 1 cut(s) | 775 |
| BcoDI | GTCTC | 5 cut(s) | 378, 401, 635, 1203, 1807 |
| BfmI | CTRYAG | 3 cut(s) | 469, 1071, 1934 |
| BfrI | CTTAAG | 1 cut(s) | 713 |
| BfuI | GTATCC | 2 cut(s) | 1806, 1869 |
| BglII | AGATCT | 2 cut(s) | 565, 1890 |
| BisI | GCNGC | 6 cut(s) | 492, 574, 906, 927, 1218, 1829 |
| BlsI | GCNGC | 6 cut(s) | 493, 575, 907, 928, 1219, 1830 |
| BmcAI | AGTACT | 2 cut(s) | 1209, 1504 |
| Bme1390I | CCNGG | 4 cut(s) | 1050, 1563, 1767, 1865 |
| Bme18I | GGWCC | 3 cut(s) | 551, 1138, 1249 |
| BmgT120I | GGNCC | 3 cut(s) | 551, 1138, 1249 |
| BmiI | GGNNCC | 2 cut(s) | 270, 1139 |
| BmrFI | CCNGG | 4 cut(s) | 1050, 1563, 1767, 1865 |
| BmsI | GCATC | 1 cut(s) | 478 |
| BmtI | GCTAGC | 1 cut(s) | 722 |
| BpmI | CTGGAG | 3 cut(s) | 1638, 1665, 1886 |
| Bpu10I | CCTNAGC | 1 cut(s) | 6 |
| BpuEI | CTTGAG | 4 cut(s) | 383, 1185, 1689, 1808 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1405 |
| BsaI | GGTCTC | 2 cut(s) | 1203, 1807 |
| BsaJI | CCNNGG | 2 cut(s) | 1374, 1863 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 740, 1562, 1766 |
| Bse1I | ACTGG | 1 cut(s) | 393 |
| Bse21I | CCTNAGG | 1 cut(s) | 1521 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1405 |
| BseBI | CCWGG | 4 cut(s) | 1050, 1563, 1767, 1865 |
| BseDI | CCNNGG | 2 cut(s) | 1374, 1863 |
| BseGI | GGATG | 3 cut(s) | 180, 602, 1474 |
| BseJI | GATNNNNATC | 1 cut(s) | 1405 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 740, 1562, 1766 |
| BseMII | CTCAG | 9 cut(s) | 42, 238, 546, 714, 805, 864, 1049, 1113, 1535 |
| BseNI | ACTGG | 1 cut(s) | 393 |
| BseRI | GAGGAG | 1 cut(s) | 1509 |
| BseXI | GCAGC | 5 cut(s) | 503, 585, 892, 938, 1815 |
| BshFI | GGCC | 1 cut(s) | 843 |
| BsiHKAI | GWGCWC | 1 cut(s) | 20 |
| BslFI | GGGAC | 3 cut(s) | 1151, 1166, 1914 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 740, 1562, 1766 |
| BsmAI | GTCTC | 5 cut(s) | 378, 401, 635, 1203, 1807 |
| BsmFI | GGGAC | 3 cut(s) | 1151, 1166, 1914 |
| BsnI | GGCC | 1 cut(s) | 843 |
| Bso31I | GGTCTC | 2 cut(s) | 1203, 1807 |
| Bsp1286I | GDGCHC | 1 cut(s) | 20 |
| Bsp1407I | TGTACA | 2 cut(s) | 1342, 1845 |
| BspACI | CCGC | 1 cut(s) | 1218 |
| BspANI | GGCC | 1 cut(s) | 843 |
| BspCNI | CTCAG | 9 cut(s) | 43, 237, 547, 715, 804, 865, 1048, 1114, 1534 |
| BspHI | TCATGA | 2 cut(s) | 585, 657 |
| BspLI | GGNNCC | 2 cut(s) | 270, 1139 |
| BspOI | GCTAGC | 1 cut(s) | 722 |
| BspPI | GGATC | 3 cut(s) | 1364, 1430, 1573 |
| BspTI | CTTAAG | 1 cut(s) | 713 |
| BspTNI | GGTCTC | 2 cut(s) | 1203, 1807 |
| BsrGI | TGTACA | 2 cut(s) | 1342, 1845 |
| BsrI | ACTGG | 1 cut(s) | 393 |
| BssECI | CCNNGG | 2 cut(s) | 1374, 1863 |
| BssT1I | CCWWGG | 1 cut(s) | 1374 |
| Bst2UI | CCWGG | 4 cut(s) | 1050, 1563, 1767, 1865 |
| Bst4CI | ACNGT | 3 cut(s) | 764, 1455, 1935 |
| Bst6I | CTCTTC | 3 cut(s) | 34, 633, 1699 |
| BstAFI | CTTAAG | 1 cut(s) | 713 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1045 |
| BstAUI | TGTACA | 2 cut(s) | 1342, 1845 |
| BstC8I | GCNNGC | 1 cut(s) | 720 |
| BstEII | GGTNACC | 2 cut(s) | 344, 1715 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 738 |
| BstF5I | GGATG | 3 cut(s) | 180, 602, 1474 |
| BstMAI | GTCTC | 5 cut(s) | 378, 401, 635, 1203, 1807 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 902, 1045 |
| BstNI | CCWGG | 4 cut(s) | 1050, 1563, 1767, 1865 |
| BstNSI | RCATGY | 3 cut(s) | 451, 1343, 1907 |
| BstPI | GGTNACC | 2 cut(s) | 344, 1715 |
| BstSCI | CCNGG | 4 cut(s) | 1048, 1561, 1765, 1863 |
| BstSFI | CTRYAG | 3 cut(s) | 469, 1071, 1934 |
| BstV1I | GCAGC | 5 cut(s) | 503, 585, 892, 938, 1815 |
| BstX2I | RGATCY | 3 cut(s) | 565, 1369, 1890 |
| BstYI | RGATCY | 3 cut(s) | 565, 1369, 1890 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1521 |
| BsuI | GTATCC | 2 cut(s) | 1806, 1869 |
| BsuRI | GGCC | 1 cut(s) | 843 |
| BtsCI | GGATG | 3 cut(s) | 180, 602, 1474 |
| BtsI | GCAGTG | 2 cut(s) | 891, 1212 |
| BtsIMutI | CAGTG | 6 cut(s) | 93, 760, 870, 891, 1212, 1931 |
| Cac8I | GCNNGC | 1 cut(s) | 720 |
| CciI | TCATGA | 2 cut(s) | 585, 657 |
| Cfr13I | GGNCC | 3 cut(s) | 551, 1138, 1249 |
| CseI | GACGC | 1 cut(s) | 698 |
| Csp6I | GTAC | 6 cut(s) | 765, 1208, 1343, 1503, 1661, 1846 |
| CviAII | CATG | 8 cut(s) | 219, 249, 448, 586, 658, 857, 1340, 1904 |
| CviQI | GTAC | 6 cut(s) | 765, 1208, 1343, 1503, 1661, 1846 |
| DraI | TTTAAA | 1 cut(s) | 63 |
| EaeI | YGGCCR | 1 cut(s) | 841 |
| Eam1104I | CTCTTC | 3 cut(s) | 34, 633, 1699 |
| EarI | CTCTTC | 3 cut(s) | 34, 633, 1699 |
| Ecl136II | GAGCTC | 1 cut(s) | 18 |
| Eco130I | CCWWGG | 1 cut(s) | 1374 |
| Eco24I | GRGCYC | 1 cut(s) | 20 |
| Eco31I | GGTCTC | 2 cut(s) | 1203, 1807 |
| Eco32I | GATATC | 1 cut(s) | 788 |
| Eco47I | GGWCC | 3 cut(s) | 551, 1138, 1249 |
| Eco53kI | GAGCTC | 1 cut(s) | 18 |
| Eco57I | CTGAAG | 1 cut(s) | 534 |
| Eco81I | CCTNAGG | 1 cut(s) | 1521 |
| Eco91I | GGTNACC | 2 cut(s) | 344, 1715 |
| EcoICRI | GAGCTC | 1 cut(s) | 18 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 738 |
| EcoO109I | RGGNCCY | 3 cut(s) | 551, 1138, 1249 |
| EcoO65I | GGTNACC | 2 cut(s) | 344, 1715 |
| EcoRII | CCWGG | 4 cut(s) | 1048, 1561, 1765, 1863 |
| EcoRV | GATATC | 1 cut(s) | 788 |
| EcoT14I | CCWWGG | 1 cut(s) | 1374 |
| EcoT38I | GRGCYC | 1 cut(s) | 20 |
| ErhI | CCWWGG | 1 cut(s) | 1374 |
| FaeI | CATG | 8 cut(s) | 222, 252, 451, 589, 661, 860, 1343, 1907 |
| FaqI | GGGAC | 3 cut(s) | 1151, 1166, 1914 |
| FatI | CATG | 8 cut(s) | 218, 248, 447, 585, 657, 856, 1339, 1903 |
| FbaI | TGATCA | 1 cut(s) | 775 |
| Fnu4HI | GCNGC | 6 cut(s) | 492, 574, 906, 927, 1218, 1829 |
| FokI | GGATG | 3 cut(s) | 167, 589, 1481 |
| FriOI | GRGCYC | 1 cut(s) | 20 |
| Fsp4HI | GCNGC | 6 cut(s) | 492, 574, 906, 927, 1218, 1829 |
| GluI | GCNGC | 6 cut(s) | 492, 574, 906, 927, 1218, 1829 |
| GsuI | CTGGAG | 3 cut(s) | 1638, 1665, 1886 |
| HaeIII | GGCC | 1 cut(s) | 843 |
| HgaI | GACGC | 1 cut(s) | 698 |
| Hin1II | CATG | 8 cut(s) | 222, 252, 451, 589, 661, 860, 1343, 1907 |
| HindIII | AAGCTT | 1 cut(s) | 1062 |
| HinfI | GANTC | 8 cut(s) | 302, 366, 589, 668, 962, 977, 1191, 1511 |
| HphI | GGTGA | 6 cut(s) | 68, 188, 382, 416, 1257, 1727 |
| Hpy166II | GTNNAC | 5 cut(s) | 424, 463, 746, 1846, 1848 |
| Hpy188I | TCNGA | 3 cut(s) | 52, 688, 794 |
| Hpy8I | GTNNAC | 5 cut(s) | 424, 463, 746, 1846, 1848 |
| HpyAV | CCTTC | 2 cut(s) | 646, 1785 |
| HpyCH4III | ACNGT | 3 cut(s) | 764, 1455, 1935 |
| HpyCH4IV | ACGT | 2 cut(s) | 76, 748 |
| HpyCH4V | TGCA | 8 cut(s) | 491, 502, 704, 896, 908, 926, 1339, 1831 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 902, 1045 |
| HpySE526I | ACGT | 2 cut(s) | 76, 748 |
| Hsp92II | CATG | 8 cut(s) | 222, 252, 451, 589, 661, 860, 1343, 1907 |
| Ksp22I | TGATCA | 1 cut(s) | 775 |
| LmnI | GCTCC | 5 cut(s) | 23, 268, 407, 626, 1657 |
| Lsp1109I | GCAGC | 5 cut(s) | 503, 585, 892, 938, 1815 |
| LweI | GCATC | 1 cut(s) | 478 |
| MaeII | ACGT | 2 cut(s) | 76, 748 |
| MaeIII | GTNAC | 6 cut(s) | 90, 176, 252, 344, 1618, 1715 |
| MflI | RGATCY | 3 cut(s) | 565, 1369, 1890 |
| MhlI | GDGCHC | 1 cut(s) | 20 |
| MlsI | TGGCCA | 1 cut(s) | 843 |
| MluNI | TGGCCA | 1 cut(s) | 843 |
| MlyI | GAGTC | 4 cut(s) | 311, 375, 598, 971 |
| MmeI | TCCRAC | 3 cut(s) | 556, 961, 1578 |
| Mox20I | TGGCCA | 1 cut(s) | 843 |
| MroXI | GAANNNNTTC | 2 cut(s) | 567, 1488 |
| MscI | TGGCCA | 1 cut(s) | 843 |
| MseI | TTAA | 4 cut(s) | 62, 171, 714, 1058 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1725 |
| Msp20I | TGGCCA | 1 cut(s) | 843 |
| MspA1I | CMGCKG | 1 cut(s) | 905 |
| MspCI | CTTAAG | 1 cut(s) | 713 |
| MspR9I | CCNGG | 4 cut(s) | 1050, 1563, 1767, 1865 |
| MvaI | CCWGG | 4 cut(s) | 1050, 1563, 1767, 1865 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 902, 1045 |
| NheI | GCTAGC | 1 cut(s) | 718 |
| NlaIII | CATG | 8 cut(s) | 222, 252, 451, 589, 661, 860, 1343, 1907 |
| NlaIV | GGNNCC | 2 cut(s) | 270, 1139 |
| NmeAIII | GCCGAG | 1 cut(s) | 411 |
| NmuCI | GTSAC | 2 cut(s) | 176, 1715 |
| NspI | RCATGY | 3 cut(s) | 451, 1343, 1907 |
| PagI | TCATGA | 2 cut(s) | 585, 657 |
| PdmI | GAANNNNTTC | 2 cut(s) | 567, 1488 |
| PfeI | GAWTC | 4 cut(s) | 668, 977, 1191, 1511 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1562 |
| PfoI | TCCNGGA | 1 cut(s) | 1561 |
| PkrI | GCNGC | 6 cut(s) | 493, 575, 907, 928, 1219, 1830 |
| PleI | GAGTC | 4 cut(s) | 310, 374, 597, 970 |
| PpsI | GAGTC | 4 cut(s) | 310, 374, 597, 970 |
| PpuMI | RGGWCCY | 3 cut(s) | 551, 1138, 1249 |
| PshBI | ATTAAT | 1 cut(s) | 171 |
| Psp124BI | GAGCTC | 1 cut(s) | 20 |
| Psp5II | RGGWCCY | 3 cut(s) | 551, 1138, 1249 |
| Psp6I | CCWGG | 4 cut(s) | 1048, 1561, 1765, 1863 |
| PspEI | GGTNACC | 2 cut(s) | 344, 1715 |
| PspGI | CCWGG | 4 cut(s) | 1048, 1561, 1765, 1863 |
| PspN4I | GGNNCC | 2 cut(s) | 270, 1139 |
| PspPI | GGNCC | 3 cut(s) | 551, 1138, 1249 |
| PspPPI | RGGWCCY | 3 cut(s) | 551, 1138, 1249 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1335, 1367, 1630, 1662 |
| PsuI | RGATCY | 3 cut(s) | 565, 1369, 1890 |
| PvuII | CAGCTG | 1 cut(s) | 905 |
| RsaI | GTAC | 6 cut(s) | 766, 1209, 1344, 1504, 1662, 1847 |
| RsaNI | GTAC | 6 cut(s) | 765, 1208, 1343, 1503, 1661, 1846 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1725 |
| SacI | GAGCTC | 1 cut(s) | 20 |
| SaqAI | TTAA | 4 cut(s) | 62, 171, 714, 1058 |
| SatI | GCNGC | 6 cut(s) | 492, 574, 906, 927, 1218, 1829 |
| Sau96I | GGNCC | 3 cut(s) | 551, 1138, 1249 |
| ScaI | AGTACT | 2 cut(s) | 1209, 1504 |
| SchI | GAGTC | 4 cut(s) | 311, 375, 598, 971 |
| ScrFI | CCNGG | 4 cut(s) | 1050, 1563, 1767, 1865 |
| SduI | GDGCHC | 1 cut(s) | 20 |
| SfaNI | GCATC | 1 cut(s) | 478 |
| SfcI | CTRYAG | 3 cut(s) | 469, 1071, 1934 |
| SinI | GGWCC | 3 cut(s) | 551, 1138, 1249 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1725 |
| SmlI | CTYRAG | 5 cut(s) | 398, 713, 1200, 1704, 1823 |
| SmoI | CTYRAG | 5 cut(s) | 398, 713, 1200, 1704, 1823 |
| SsiI | CCGC | 1 cut(s) | 1218 |
| SstI | GAGCTC | 1 cut(s) | 20 |
| StyD4I | CCNGG | 4 cut(s) | 1048, 1561, 1765, 1863 |
| StyI | CCWWGG | 1 cut(s) | 1374 |
| TaaI | ACNGT | 3 cut(s) | 764, 1455, 1935 |
| TaiI | ACGT | 2 cut(s) | 79, 751 |
| TaqI | TCGA | 2 cut(s) | 155, 1804 |
| TatI | WGTACW | 5 cut(s) | 764, 1207, 1342, 1502, 1845 |
| TauI | GCSGC | 1 cut(s) | 1220 |
| TfiI | GAWTC | 4 cut(s) | 668, 977, 1191, 1511 |
| Tru1I | TTAA | 4 cut(s) | 62, 171, 714, 1058 |
| Tru9I | TTAA | 4 cut(s) | 62, 171, 714, 1058 |
| TscAI | CASTG | 6 cut(s) | 93, 767, 877, 898, 1219, 1938 |
| TseFI | GTSAC | 2 cut(s) | 176, 1715 |
| TseI | GCWGC | 5 cut(s) | 491, 573, 905, 926, 1828 |
| Tsp45I | GTSAC | 2 cut(s) | 176, 1715 |
| TspRI | CASTG | 6 cut(s) | 93, 767, 877, 898, 1219, 1938 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1562 |
| Vha464I | CTTAAG | 1 cut(s) | 713 |
| VpaK11BI | GGWCC | 3 cut(s) | 551, 1138, 1249 |
| VspI | ATTAAT | 1 cut(s) | 171 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 738 |
| XapI | RAATTY | 5 cut(s) | 45, 259, 920, 998, 1601 |
| XceI | RCATGY | 3 cut(s) | 451, 1343, 1907 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 836 |
| XmnI | GAANNNNTTC | 2 cut(s) | 567, 1488 |
| ZrmI | AGTACT | 2 cut(s) | 1209, 1504 |