transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 240, 1682 |
| AcsI | RAATTY | 6 cut(s) | 101, 775, 832, 866, 959, 1383 |
| AcuI | CTGAAG | 2 cut(s) | 711, 993 |
| AfaI | GTAC | 3 cut(s) | 704, 1015, 1549 |
| AflII | CTTAAG | 1 cut(s) | 499 |
| AflIII | ACRYGT | 1 cut(s) | 754 |
| AjnI | CCWGG | 3 cut(s) | 792, 1144, 1666 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 33 |
| Alw26I | GTCTC | 3 cut(s) | 614, 709, 1453 |
| AlwI | GGATC | 2 cut(s) | 240, 1682 |
| Ama87I | CYCGRG | 1 cut(s) | 315 |
| AoxI | GGCC | 1 cut(s) | 1589 |
| ApeKI | GCWGC | 5 cut(s) | 311, 732, 797, 800, 872 |
| ApoI | RAATTY | 6 cut(s) | 101, 775, 832, 866, 959, 1383 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 101, 594 |
| AspA2I | CCTAGG | 1 cut(s) | 952 |
| AsuHPI | GGTGA | 6 cut(s) | 619, 771, 829, 920, 1153, 1190 |
| AsuII | TTCGAA | 3 cut(s) | 583, 598, 1381 |
| AvaI | CYCGRG | 1 cut(s) | 315 |
| AvrII | CCTAGG | 1 cut(s) | 952 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1692, 1724 |
| BauI | CACGAG | 2 cut(s) | 1482, 1742 |
| BbsI | GAAGAC | 1 cut(s) | 1175 |
| BbvI | GCAGC | 5 cut(s) | 298, 744, 809, 812, 884 |
| BccI | CCATC | 2 cut(s) | 562, 1439 |
| BciT130I | CCWGG | 3 cut(s) | 794, 1146, 1668 |
| BcoDI | GTCTC | 3 cut(s) | 614, 709, 1453 |
| BfaI | CTAG | 6 cut(s) | 123, 413, 444, 645, 953, 1215 |
| BfmI | CTRYAG | 2 cut(s) | 1086, 1404 |
| BfrI | CTTAAG | 1 cut(s) | 499 |
| BglII | AGATCT | 1 cut(s) | 1153 |
| BisI | GCNGC | 5 cut(s) | 312, 733, 798, 801, 873 |
| BlnI | CCTAGG | 1 cut(s) | 952 |
| BlsI | GCNGC | 5 cut(s) | 313, 734, 799, 802, 874 |
| BmcAI | AGTACT | 1 cut(s) | 1549 |
| Bme1390I | CCNGG | 3 cut(s) | 794, 1146, 1668 |
| BmeT110I | CYCGRG | 1 cut(s) | 315 |
| BmrFI | CCNGG | 3 cut(s) | 794, 1146, 1668 |
| BmsI | GCATC | 2 cut(s) | 274, 644 |
| BpiI | GAAGAC | 1 cut(s) | 1175 |
| Bpu14I | TTCGAA | 3 cut(s) | 583, 598, 1381 |
| BsaI | GGTCTC | 2 cut(s) | 614, 709 |
| BsaJI | CCNNGG | 2 cut(s) | 952, 1666 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1513, 1543 |
| BseBI | CCWGG | 3 cut(s) | 794, 1146, 1668 |
| BseDI | CCNNGG | 2 cut(s) | 952, 1666 |
| BseGI | GGATG | 3 cut(s) | 1063, 1612, 1672 |
| BseMII | CTCAG | 6 cut(s) | 429, 537, 895, 1092, 1683, 1776 |
| BseRI | GAGGAG | 1 cut(s) | 482 |
| BseXI | GCAGC | 5 cut(s) | 298, 744, 809, 812, 884 |
| BseYI | CCCAGC | 1 cut(s) | 5 |
| BsgI | GTGCAG | 1 cut(s) | 930 |
| BshFI | GGCC | 1 cut(s) | 1591 |
| BsiHKCI | CYCGRG | 1 cut(s) | 315 |
| BsmAI | GTCTC | 3 cut(s) | 614, 709, 1453 |
| BsnI | GGCC | 1 cut(s) | 1591 |
| Bso31I | GGTCTC | 2 cut(s) | 614, 709 |
| BsoBI | CYCGRG | 1 cut(s) | 315 |
| Bsp119I | TTCGAA | 3 cut(s) | 583, 598, 1381 |
| Bsp1407I | TGTACA | 1 cut(s) | 702 |
| Bsp143I | GATC | 5 cut(s) | 232, 346, 1090, 1153, 1687 |
| BspANI | GGCC | 1 cut(s) | 1591 |
| BspCNI | CTCAG | 6 cut(s) | 430, 538, 894, 1091, 1684, 1775 |
| BspPI | GGATC | 2 cut(s) | 240, 1682 |
| BspT104I | TTCGAA | 3 cut(s) | 583, 598, 1381 |
| BspTI | CTTAAG | 1 cut(s) | 499 |
| BspTNI | GGTCTC | 2 cut(s) | 614, 709 |
| BsrGI | TGTACA | 1 cut(s) | 702 |
| BssECI | CCNNGG | 2 cut(s) | 952, 1666 |
| BssMI | GATC | 5 cut(s) | 232, 346, 1090, 1153, 1687 |
| BssSI | CACGAG | 2 cut(s) | 1482, 1742 |
| BssT1I | CCWWGG | 1 cut(s) | 952 |
| Bst2BI | CACGAG | 2 cut(s) | 1482, 1742 |
| Bst2UI | CCWGG | 3 cut(s) | 794, 1146, 1668 |
| Bst4CI | ACNGT | 1 cut(s) | 919 |
| Bst6I | CTCTTC | 2 cut(s) | 580, 1638 |
| BstAFI | CTTAAG | 1 cut(s) | 499 |
| BstAUI | TGTACA | 1 cut(s) | 702 |
| BstBI | TTCGAA | 3 cut(s) | 583, 598, 1381 |
| BstC8I | GCNNGC | 4 cut(s) | 496, 687, 967, 1706 |
| BstDEI | CTNAG | 9 cut(s) | 80, 156, 438, 546, 881, 1078, 1539, 1692, 1762 |
| BstF5I | GGATG | 3 cut(s) | 1063, 1612, 1672 |
| BstKTI | GATC | 5 cut(s) | 235, 349, 1093, 1156, 1690 |
| BstMAI | GTCTC | 3 cut(s) | 614, 709, 1453 |
| BstMBI | GATC | 5 cut(s) | 232, 346, 1090, 1153, 1687 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1535, 1753 |
| BstNI | CCWGG | 3 cut(s) | 794, 1146, 1668 |
| BstNSI | RCATGY | 1 cut(s) | 758 |
| BstSCI | CCNGG | 3 cut(s) | 792, 1144, 1666 |
| BstSFI | CTRYAG | 2 cut(s) | 1086, 1404 |
| BstV1I | GCAGC | 5 cut(s) | 298, 744, 809, 812, 884 |
| BstV2I | GAAGAC | 1 cut(s) | 1175 |
| BstX2I | RGATCY | 1 cut(s) | 1153 |
| BstYI | RGATCY | 1 cut(s) | 1153 |
| BsuRI | GGCC | 1 cut(s) | 1591 |
| BtsCI | GGATG | 3 cut(s) | 1063, 1612, 1672 |
| BtsIMutI | CAGTG | 1 cut(s) | 1775 |
| Cac8I | GCNNGC | 4 cut(s) | 496, 687, 967, 1706 |
| Csp6I | GTAC | 3 cut(s) | 703, 1014, 1548 |
| CviQI | GTAC | 3 cut(s) | 703, 1014, 1548 |
| DdeI | CTNAG | 9 cut(s) | 80, 156, 438, 546, 881, 1078, 1539, 1692, 1762 |
| DpnI | GATC | 5 cut(s) | 234, 348, 1092, 1155, 1689 |
| DpnII | GATC | 5 cut(s) | 232, 346, 1090, 1153, 1687 |
| Eam1104I | CTCTTC | 2 cut(s) | 580, 1638 |
| EarI | CTCTTC | 2 cut(s) | 580, 1638 |
| Eco130I | CCWWGG | 1 cut(s) | 952 |
| Eco31I | GGTCTC | 2 cut(s) | 614, 709 |
| Eco57I | CTGAAG | 2 cut(s) | 711, 993 |
| Eco88I | CYCGRG | 1 cut(s) | 315 |
| EcoRI | GAATTC | 3 cut(s) | 101, 775, 1383 |
| EcoRII | CCWGG | 3 cut(s) | 792, 1144, 1666 |
| EcoT14I | CCWWGG | 1 cut(s) | 952 |
| EcoT22I | ATGCAT | 2 cut(s) | 267, 900 |
| ErhI | CCWWGG | 1 cut(s) | 952 |
| FauNDI | CATATG | 2 cut(s) | 894, 1501 |
| Fnu4HI | GCNGC | 5 cut(s) | 312, 733, 798, 801, 873 |
| FokI | GGATG | 3 cut(s) | 1070, 1619, 1659 |
| Fsp4HI | GCNGC | 5 cut(s) | 312, 733, 798, 801, 873 |
| FspBI | CTAG | 6 cut(s) | 123, 413, 444, 645, 953, 1215 |
| GluI | GCNGC | 5 cut(s) | 312, 733, 798, 801, 873 |
| GsaI | CCCAGC | 1 cut(s) | 9 |
| HaeIII | GGCC | 1 cut(s) | 1591 |
| HindIII | AAGCTT | 5 cut(s) | 158, 496, 1005, 1433, 1706 |
| HinfI | GANTC | 7 cut(s) | 59, 200, 215, 274, 1076, 1185, 1201 |
| HphI | GGTGA | 6 cut(s) | 619, 771, 829, 920, 1153, 1190 |
| Hpy166II | GTNNAC | 2 cut(s) | 703, 1510 |
| Hpy188I | TCNGA | 7 cut(s) | 52, 303, 508, 640, 884, 1255, 1444 |
| Hpy188III | TCNNGA | 4 cut(s) | 271, 1080, 1313, 1691 |
| Hpy8I | GTNNAC | 2 cut(s) | 703, 1510 |
| HpyAV | CCTTC | 4 cut(s) | 144, 353, 1036, 1175 |
| HpyCH4III | ACNGT | 1 cut(s) | 919 |
| HpyCH4IV | ACGT | 1 cut(s) | 76 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1535, 1753 |
| HpyF3I | CTNAG | 9 cut(s) | 80, 156, 438, 546, 881, 1078, 1539, 1692, 1762 |
| HpySE526I | ACGT | 1 cut(s) | 76 |
| Kzo9I | GATC | 5 cut(s) | 232, 346, 1090, 1153, 1687 |
| LmnI | GCTCC | 3 cut(s) | 492, 1082, 1534 |
| Lsp1109I | GCAGC | 5 cut(s) | 298, 744, 809, 812, 884 |
| LweI | GCATC | 2 cut(s) | 274, 644 |
| MaeI | CTAG | 6 cut(s) | 123, 413, 444, 645, 953, 1215 |
| MaeII | ACGT | 1 cut(s) | 76 |
| MaeIII | GTNAC | 2 cut(s) | 130, 1198 |
| MalI | GATC | 5 cut(s) | 234, 348, 1092, 1155, 1689 |
| MboI | GATC | 5 cut(s) | 232, 346, 1090, 1153, 1687 |
| MflI | RGATCY | 1 cut(s) | 1153 |
| MluCI | AATT | 8 cut(s) | 101, 775, 832, 866, 959, 1297, 1383, 1736 |
| MlyI | GAGTC | 4 cut(s) | 68, 194, 1070, 1195 |
| MmeI | TCCRAC | 3 cut(s) | 730, 752, 1397 |
| Mph1103I | ATGCAT | 2 cut(s) | 267, 900 |
| MroXI | GAANNNNTTC | 2 cut(s) | 101, 594 |
| MseI | TTAA | 4 cut(s) | 455, 500, 857, 1730 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1359, 1443 |
| MspCI | CTTAAG | 1 cut(s) | 499 |
| MspR9I | CCNGG | 3 cut(s) | 794, 1146, 1668 |
| MvaI | CCWGG | 3 cut(s) | 794, 1146, 1668 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1535, 1753 |
| NdeI | CATATG | 2 cut(s) | 894, 1501 |
| NdeII | GATC | 5 cut(s) | 232, 346, 1090, 1153, 1687 |
| NmuCI | GTSAC | 1 cut(s) | 1198 |
| NsiI | ATGCAT | 2 cut(s) | 267, 900 |
| NspI | RCATGY | 1 cut(s) | 758 |
| NspV | TTCGAA | 3 cut(s) | 583, 598, 1381 |
| PaeR7I | CTCGAG | 1 cut(s) | 315 |
| PciI | ACATGT | 1 cut(s) | 754 |
| PdmI | GAANNNNTTC | 2 cut(s) | 101, 594 |
| PfeI | GAWTC | 3 cut(s) | 215, 274, 1185 |
| PkrI | GCNGC | 5 cut(s) | 313, 734, 799, 802, 874 |
| PleI | GAGTC | 4 cut(s) | 67, 194, 1070, 1195 |
| PpsI | GAGTC | 4 cut(s) | 67, 194, 1070, 1195 |
| PscI | ACATGT | 1 cut(s) | 754 |
| Psp6I | CCWGG | 3 cut(s) | 792, 1144, 1666 |
| PspFI | CCCAGC | 1 cut(s) | 5 |
| PspGI | CCWGG | 3 cut(s) | 792, 1144, 1666 |
| PspXI | VCTCGAGB | 1 cut(s) | 315 |
| PsuI | RGATCY | 1 cut(s) | 1153 |
| RsaI | GTAC | 3 cut(s) | 704, 1015, 1549 |
| RsaNI | GTAC | 3 cut(s) | 703, 1014, 1548 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1359, 1443 |
| SaqAI | TTAA | 4 cut(s) | 455, 500, 857, 1730 |
| SatI | GCNGC | 5 cut(s) | 312, 733, 798, 801, 873 |
| Sau3AI | GATC | 5 cut(s) | 232, 346, 1090, 1153, 1687 |
| ScaI | AGTACT | 1 cut(s) | 1549 |
| SchI | GAGTC | 4 cut(s) | 68, 194, 1070, 1195 |
| ScrFI | CCNGG | 3 cut(s) | 794, 1146, 1668 |
| SfaNI | GCATC | 2 cut(s) | 274, 644 |
| SfcI | CTRYAG | 2 cut(s) | 1086, 1404 |
| Sfr274I | CTCGAG | 1 cut(s) | 315 |
| SfuI | TTCGAA | 3 cut(s) | 583, 598, 1381 |
| SlaI | CTCGAG | 1 cut(s) | 315 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1359, 1443 |
| SmlI | CTYRAG | 3 cut(s) | 315, 499, 1774 |
| SmoI | CTYRAG | 3 cut(s) | 315, 499, 1774 |
| Sse9I | AATT | 8 cut(s) | 101, 775, 832, 866, 959, 1297, 1383, 1736 |
| SspMI | CTAG | 6 cut(s) | 123, 413, 444, 645, 953, 1215 |
| StyD4I | CCNGG | 3 cut(s) | 792, 1144, 1666 |
| StyI | CCWWGG | 1 cut(s) | 952 |
| TaaI | ACNGT | 1 cut(s) | 919 |
| TaiI | ACGT | 1 cut(s) | 79 |
| TaqI | TCGA | 4 cut(s) | 316, 583, 598, 1381 |
| TasI | AATT | 8 cut(s) | 101, 775, 832, 866, 959, 1297, 1383, 1736 |
| TatI | WGTACW | 2 cut(s) | 702, 1547 |
| TfiI | GAWTC | 3 cut(s) | 215, 274, 1185 |
| Tru1I | TTAA | 4 cut(s) | 455, 500, 857, 1730 |
| Tru9I | TTAA | 4 cut(s) | 455, 500, 857, 1730 |
| TscAI | CASTG | 1 cut(s) | 1775 |
| TseFI | GTSAC | 1 cut(s) | 1198 |
| TseI | GCWGC | 5 cut(s) | 311, 732, 797, 800, 872 |
| Tsp45I | GTSAC | 1 cut(s) | 1198 |
| TspRI | CASTG | 1 cut(s) | 1775 |
| Vha464I | CTTAAG | 1 cut(s) | 499 |
| XapI | RAATTY | 6 cut(s) | 101, 775, 832, 866, 959, 1383 |
| XceI | RCATGY | 1 cut(s) | 758 |
| XhoI | CTCGAG | 1 cut(s) | 315 |
| XmaJI | CCTAGG | 1 cut(s) | 952 |
| XmnI | GAANNNNTTC | 2 cut(s) | 101, 594 |
| XspI | CTAG | 6 cut(s) | 123, 413, 444, 645, 953, 1215 |
| ZrmI | AGTACT | 1 cut(s) | 1549 |
| Zsp2I | ATGCAT | 2 cut(s) | 267, 900 |