transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 240 |
| AcsI | RAATTY | 4 cut(s) | 101, 285, 833, 965 |
| AcuI | CTGAAG | 1 cut(s) | 383 |
| AfaI | GTAC | 1 cut(s) | 737 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1026 |
| AflII | CTTAAG | 1 cut(s) | 547 |
| AflIII | ACRYGT | 1 cut(s) | 787 |
| AgsI | TTSAA | 8 cut(s) | 97, 106, 374, 610, 632, 760, 1034, 1100 |
| AjnI | CCWGG | 2 cut(s) | 692, 1024 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 33 |
| Alw26I | GTCTC | 1 cut(s) | 662 |
| AlwI | GGATC | 1 cut(s) | 240 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 771 |
| Ama87I | CYCGRG | 1 cut(s) | 363 |
| ApeKI | GCWGC | 3 cut(s) | 359, 765, 971 |
| ApoI | RAATTY | 4 cut(s) | 101, 285, 833, 965 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 101, 642 |
| AsuHPI | GGTGA | 3 cut(s) | 667, 928, 1019 |
| AsuII | TTCGAA | 1 cut(s) | 646 |
| AvaI | CYCGRG | 1 cut(s) | 363 |
| BbsI | GAAGAC | 1 cut(s) | 297 |
| BbvCI | CCTCAGC | 1 cut(s) | 513 |
| BbvI | GCAGC | 3 cut(s) | 371, 777, 958 |
| BccI | CCATC | 1 cut(s) | 610 |
| BciT130I | CCWGG | 2 cut(s) | 694, 1026 |
| BcoDI | GTCTC | 1 cut(s) | 662 |
| BfaI | CTAG | 3 cut(s) | 123, 461, 492 |
| BfrI | CTTAAG | 1 cut(s) | 547 |
| BisI | GCNGC | 3 cut(s) | 360, 766, 972 |
| BlsI | GCNGC | 3 cut(s) | 361, 767, 973 |
| Bme1390I | CCNGG | 2 cut(s) | 694, 1026 |
| BmeT110I | CYCGRG | 1 cut(s) | 363 |
| BmrFI | CCNGG | 2 cut(s) | 694, 1026 |
| BmsI | GCATC | 4 cut(s) | 322, 436, 692, 984 |
| BpiI | GAAGAC | 1 cut(s) | 297 |
| Bpu10I | CCTNAGC | 2 cut(s) | 513, 819 |
| Bpu14I | TTCGAA | 1 cut(s) | 646 |
| BsaBI | GATNNNNATC | 1 cut(s) | 63 |
| BsaI | GGTCTC | 1 cut(s) | 662 |
| BsaJI | CCNNGG | 3 cut(s) | 264, 693, 1025 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 923, 953 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1026 |
| Bse8I | GATNNNNATC | 1 cut(s) | 63 |
| BseBI | CCWGG | 2 cut(s) | 694, 1026 |
| BseDI | CCNNGG | 3 cut(s) | 264, 693, 1025 |
| BseGI | GGATG | 1 cut(s) | 34 |
| BseJI | GATNNNNATC | 1 cut(s) | 63 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1026 |
| BseMII | CTCAG | 5 cut(s) | 291, 504, 585, 810, 909 |
| BseRI | GAGGAG | 1 cut(s) | 530 |
| BseXI | GCAGC | 3 cut(s) | 371, 777, 958 |
| BseYI | CCCAGC | 1 cut(s) | 5 |
| BsgI | GTGCAG | 1 cut(s) | 1029 |
| BsiHKCI | CYCGRG | 1 cut(s) | 363 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1026 |
| BsmAI | GTCTC | 1 cut(s) | 662 |
| Bso31I | GGTCTC | 1 cut(s) | 662 |
| BsoBI | CYCGRG | 1 cut(s) | 363 |
| Bsp119I | TTCGAA | 1 cut(s) | 646 |
| Bsp1407I | TGTACA | 1 cut(s) | 735 |
| Bsp143I | GATC | 2 cut(s) | 232, 394 |
| Bsp19I | CCATGG | 1 cut(s) | 264 |
| BspCNI | CTCAG | 5 cut(s) | 292, 505, 586, 811, 910 |
| BspPI | GGATC | 1 cut(s) | 240 |
| BspT104I | TTCGAA | 1 cut(s) | 646 |
| BspTI | CTTAAG | 1 cut(s) | 547 |
| BspTNI | GGTCTC | 1 cut(s) | 662 |
| BsrGI | TGTACA | 1 cut(s) | 735 |
| BssECI | CCNNGG | 3 cut(s) | 264, 693, 1025 |
| BssMI | GATC | 2 cut(s) | 232, 394 |
| BssT1I | CCWWGG | 1 cut(s) | 264 |
| Bst2UI | CCWGG | 2 cut(s) | 694, 1026 |
| Bst4CI | ACNGT | 1 cut(s) | 773 |
| BstAFI | CTTAAG | 1 cut(s) | 547 |
| BstAUI | TGTACA | 1 cut(s) | 735 |
| BstBI | TTCGAA | 1 cut(s) | 646 |
| BstC8I | GCNNGC | 3 cut(s) | 544, 720, 1066 |
| BstDEI | CTNAG | 8 cut(s) | 80, 156, 300, 513, 594, 819, 918, 980 |
| BstDSI | CCRYGG | 1 cut(s) | 264 |
| BstF5I | GGATG | 1 cut(s) | 34 |
| BstKTI | GATC | 2 cut(s) | 235, 397 |
| BstMAI | GTCTC | 1 cut(s) | 662 |
| BstMBI | GATC | 2 cut(s) | 232, 394 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 890 |
| BstNI | CCWGG | 2 cut(s) | 694, 1026 |
| BstNSI | RCATGY | 1 cut(s) | 791 |
| BstSCI | CCNGG | 2 cut(s) | 692, 1024 |
| BstV1I | GCAGC | 3 cut(s) | 371, 777, 958 |
| BstV2I | GAAGAC | 1 cut(s) | 297 |
| BtgI | CCRYGG | 1 cut(s) | 264 |
| BtsCI | GGATG | 1 cut(s) | 34 |
| BtsI | GCAGTG | 1 cut(s) | 1041 |
| BtsIMutI | CAGTG | 1 cut(s) | 1041 |
| Cac8I | GCNNGC | 3 cut(s) | 544, 720, 1066 |
| CaiI | CAGNNNCTG | 1 cut(s) | 771 |
| Csp6I | GTAC | 1 cut(s) | 736 |
| CviAII | CATG | 5 cut(s) | 244, 265, 326, 788, 1021 |
| CviQI | GTAC | 1 cut(s) | 736 |
| DdeI | CTNAG | 8 cut(s) | 80, 156, 300, 513, 594, 819, 918, 980 |
| DpnI | GATC | 2 cut(s) | 234, 396 |
| DpnII | GATC | 2 cut(s) | 232, 394 |
| Eco130I | CCWWGG | 1 cut(s) | 264 |
| Eco31I | GGTCTC | 1 cut(s) | 662 |
| Eco57I | CTGAAG | 1 cut(s) | 383 |
| Eco88I | CYCGRG | 1 cut(s) | 363 |
| EcoRI | GAATTC | 1 cut(s) | 101 |
| EcoRII | CCWGG | 2 cut(s) | 692, 1024 |
| EcoT14I | CCWWGG | 1 cut(s) | 264 |
| EcoT22I | ATGCAT | 2 cut(s) | 315, 999 |
| ErhI | CCWWGG | 1 cut(s) | 264 |
| FaeI | CATG | 5 cut(s) | 247, 268, 329, 791, 1024 |
| FatI | CATG | 5 cut(s) | 243, 264, 325, 787, 1020 |
| Fnu4HI | GCNGC | 3 cut(s) | 360, 766, 972 |
| FokI | GGATG | 1 cut(s) | 41 |
| Fsp4HI | GCNGC | 3 cut(s) | 360, 766, 972 |
| FspBI | CTAG | 3 cut(s) | 123, 461, 492 |
| GluI | GCNGC | 3 cut(s) | 360, 766, 972 |
| GsaI | CCCAGC | 1 cut(s) | 9 |
| Hin1II | CATG | 5 cut(s) | 247, 268, 329, 791, 1024 |
| HindIII | AAGCTT | 2 cut(s) | 158, 544 |
| HinfI | GANTC | 5 cut(s) | 200, 215, 302, 322, 871 |
| HphI | GGTGA | 3 cut(s) | 667, 928, 1019 |
| Hpy166II | GTNNAC | 2 cut(s) | 413, 736 |
| Hpy188I | TCNGA | 6 cut(s) | 52, 301, 351, 556, 688, 919 |
| Hpy188III | TCNNGA | 2 cut(s) | 319, 818 |
| Hpy8I | GTNNAC | 2 cut(s) | 413, 736 |
| HpyAV | CCTTC | 5 cut(s) | 144, 401, 839, 998, 1028 |
| HpyCH4III | ACNGT | 1 cut(s) | 773 |
| HpyCH4IV | ACGT | 1 cut(s) | 76 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 890 |
| HpyF3I | CTNAG | 8 cut(s) | 80, 156, 300, 513, 594, 819, 918, 980 |
| HpySE526I | ACGT | 1 cut(s) | 76 |
| Hsp92II | CATG | 5 cut(s) | 247, 268, 329, 791, 1024 |
| Kzo9I | GATC | 2 cut(s) | 232, 394 |
| LmnI | GCTCC | 1 cut(s) | 540 |
| LpnPI | CCDG | 9 cut(s) | 304, 679, 700, 706, 778, 831, 1011, 1038, 1050 |
| Lsp1109I | GCAGC | 3 cut(s) | 371, 777, 958 |
| LweI | GCATC | 4 cut(s) | 322, 436, 692, 984 |
| MaeI | CTAG | 3 cut(s) | 123, 461, 492 |
| MaeII | ACGT | 1 cut(s) | 76 |
| MaeIII | GTNAC | 2 cut(s) | 130, 1037 |
| MalI | GATC | 2 cut(s) | 234, 396 |
| MboI | GATC | 2 cut(s) | 232, 394 |
| MboII | GAAGA | 9 cut(s) | 39, 297, 389, 575, 650, 660, 894, 897, 1022 |
| MluCI | AATT | 4 cut(s) | 101, 285, 833, 965 |
| MlyI | GAGTC | 2 cut(s) | 194, 311 |
| MmeI | TCCRAC | 2 cut(s) | 763, 848 |
| Mph1103I | ATGCAT | 2 cut(s) | 315, 999 |
| MroXI | GAANNNNTTC | 2 cut(s) | 101, 642 |
| MseI | TTAA | 4 cut(s) | 503, 548, 569, 956 |
| MspCI | CTTAAG | 1 cut(s) | 547 |
| MspR9I | CCNGG | 2 cut(s) | 694, 1026 |
| MvaI | CCWGG | 2 cut(s) | 694, 1026 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 890 |
| NcoI | CCATGG | 1 cut(s) | 264 |
| NdeII | GATC | 2 cut(s) | 232, 394 |
| NlaIII | CATG | 5 cut(s) | 247, 268, 329, 791, 1024 |
| NmuCI | GTSAC | 1 cut(s) | 1037 |
| NsiI | ATGCAT | 2 cut(s) | 315, 999 |
| NspI | RCATGY | 1 cut(s) | 791 |
| NspV | TTCGAA | 1 cut(s) | 646 |
| PaeR7I | CTCGAG | 1 cut(s) | 363 |
| PciI | ACATGT | 1 cut(s) | 787 |
| PdmI | GAANNNNTTC | 2 cut(s) | 101, 642 |
| PfeI | GAWTC | 3 cut(s) | 215, 322, 871 |
| PkrI | GCNGC | 3 cut(s) | 361, 767, 973 |
| PleI | GAGTC | 2 cut(s) | 194, 310 |
| PpsI | GAGTC | 2 cut(s) | 194, 310 |
| PscI | ACATGT | 1 cut(s) | 787 |
| Psp6I | CCWGG | 2 cut(s) | 692, 1024 |
| PspFI | CCCAGC | 1 cut(s) | 5 |
| PspGI | CCWGG | 2 cut(s) | 692, 1024 |
| PspXI | VCTCGAGB | 1 cut(s) | 363 |
| PstNI | CAGNNNCTG | 1 cut(s) | 771 |
| RsaI | GTAC | 1 cut(s) | 737 |
| RsaNI | GTAC | 1 cut(s) | 736 |
| SaqAI | TTAA | 4 cut(s) | 503, 548, 569, 956 |
| SatI | GCNGC | 3 cut(s) | 360, 766, 972 |
| Sau3AI | GATC | 2 cut(s) | 232, 394 |
| SchI | GAGTC | 2 cut(s) | 194, 311 |
| ScrFI | CCNGG | 2 cut(s) | 694, 1026 |
| SfaNI | GCATC | 4 cut(s) | 322, 436, 692, 984 |
| Sfr274I | CTCGAG | 1 cut(s) | 363 |
| SfuI | TTCGAA | 1 cut(s) | 646 |
| SlaI | CTCGAG | 1 cut(s) | 363 |
| SmlI | CTYRAG | 2 cut(s) | 363, 547 |
| SmoI | CTYRAG | 2 cut(s) | 363, 547 |
| Sse9I | AATT | 4 cut(s) | 101, 285, 833, 965 |
| SspMI | CTAG | 3 cut(s) | 123, 461, 492 |
| StyD4I | CCNGG | 2 cut(s) | 692, 1024 |
| StyI | CCWWGG | 1 cut(s) | 264 |
| TaaI | ACNGT | 1 cut(s) | 773 |
| TaiI | ACGT | 1 cut(s) | 79 |
| TaqI | TCGA | 2 cut(s) | 364, 646 |
| TasI | AATT | 4 cut(s) | 101, 285, 833, 965 |
| TatI | WGTACW | 1 cut(s) | 735 |
| TfiI | GAWTC | 3 cut(s) | 215, 322, 871 |
| Tru1I | TTAA | 4 cut(s) | 503, 548, 569, 956 |
| Tru9I | TTAA | 4 cut(s) | 503, 548, 569, 956 |
| TscAI | CASTG | 1 cut(s) | 1048 |
| TseFI | GTSAC | 1 cut(s) | 1037 |
| TseI | GCWGC | 3 cut(s) | 359, 765, 971 |
| Tsp45I | GTSAC | 1 cut(s) | 1037 |
| TspDTI | ATGAA | 7 cut(s) | 45, 114, 471, 576, 602, 674, 978 |
| TspRI | CASTG | 1 cut(s) | 1048 |
| Vha464I | CTTAAG | 1 cut(s) | 547 |
| XapI | RAATTY | 4 cut(s) | 101, 285, 833, 965 |
| XceI | RCATGY | 1 cut(s) | 791 |
| XhoI | CTCGAG | 1 cut(s) | 363 |
| XmnI | GAANNNNTTC | 2 cut(s) | 101, 642 |
| XspI | CTAG | 3 cut(s) | 123, 461, 492 |
| Zsp2I | ATGCAT | 2 cut(s) | 315, 999 |