RLG00000008015

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000621
Physical Location & Seq
Forward (+)
24285081 .. 24299468
14388 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000008015

Sequence Viewer

Length: 1356 bp
ATGGTGACTGTGAAGAAAACCAAGAAGACCCATGAGTCTACCAACAACAGGCTCGCTTTCGTCATGGAGACCGCTGCTGTCACCGACAACCTTGCTGGCCCCACCGCCGTCAACAATGCCATCGATAGCAACCAGATCTCAAGCCAAAGACCCAGGATCATTAACCAGCACAAAGTTCTCCTGGCTGCTGCGTCGTCGCTGGTGGTATGCCAGCAAGCTGGGCTTGCGGAAAATGGGACAAGCCGAGACCTTCACGAGCCACGTGTCGGGGCACCTCCGATGGAACAGGTGACCACGTGCAGGGAGTTTCTGACACCATTGGCCTTCCCGAAACGCGGCCAGGCCCTCTCTGCATTAGGTTTAGGGACAATCGCAACCCGCAAAGCCGTCTCCACCTTCACCTTGCCACCAACCAGAACATTCTCCTTCATCGAGATTCGCACTCTAGATCTACGCTCAAAGATACAAACAAAATTCAAGGTTGGGCCATTTGGATCAGAAACTGGAGGGGAAATTTTTGATGATGGTATTTACTCAACAGTGAGGCAGTTGGTGATAAATTATAGATCGTCCAATGTTGATTCCATCAGGATTGAATATGATAACAATGGGAGCTCATTTTGGTCGGACCAACATGGTTCCAGCCTGCTTTCTAGCAAAACAGACACGATCAAGCTTGATTATCCGGACGAATTTTTGACTTCAGTTCATGGACATTATGATAAGCTGTGGTACTTGCCGACCCATGTTTGCTCCCTTACTTTCAAGAGCAACAAGAAGAGTTATGGACCATATGGAAAGGAAGTAGGAAGATTGTTTTCAATTCAAGTGCCTGGGAGTAAGATTGTTGGCTTTCATGGCAGGTCTTCCCATTATATGGATATTCGGGCAATAGGCGCTCACCTAAAGCCTCTTGATCATCACGAGAATGAAAAGTACCTCCAGTCAAAACCTCTCGAGCTTAAAGACTCTTCAGTGGTGCCGGTGGTACAAAATGCGTCGACGCCTCTACTTCTAGATGGATATCCTTCTCAGACCATGCTGATCAAGGAAGATTACGACAAAGTTAACAAACCGATATCATGCGTAATTTCCAATAACCAAGTTCAGGGAAACGAGGGCAACCACTGTGGAACTTACGCTGTTGGAAATACATATAATTTTGATATCAAGGTAGACATTGAAGACAAAGACGACGACCACCAGTATAATGGCGACAATTACGAGCGCGAGGTTGAAATCTCCATTGTAACATCAGCTACTCCCGATTCAAATCGAGCGATCAAGAGGCTTGGGAAAATTCGAATGGATATGCAGGGGAAGAAGGTGAGAGAGAGAGAGATTGGGGAAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Jacalin

Protein Analysis

452

Amino Acids

50.16

Weight (kDa)

8.11

Isoelectric Point (pI)

29.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Jacalin PF01419 161 - 301 1.4e-36 Jacalin-like lectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000621)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g32560 FvH4_3g35880 FvH4_4g19501 FvH4_4g19530 FvH4_4g19531 FvH4_4g19540 FvH4_4g19540
prunus_persica Prupe.1G121600_v2.0.a1 Prupe.1G121700_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0416301 RchiOBHm_Chr4g0424661
rosa_laevigata RLG00000007388 RLG00000007432 RLG00000007434 RLG00000007435 RLG00000007439 RLG00000007441 RLG00000007442 RLG00000007458 RLG00000007465 RLG00000007997 RLG00000008015 RLG00000008016 RLG00000008017 RLG00000035315
rosa_multiflora Rmu_co8150926.1_g000001 Rmu_co8225682.1_g000001 Rmu_co8296077.1_g000001 Rmu_sc0004841.1_g000022 Rmu_sc0006553.1_g000008 Rmu_sc0008889.1_g000002
rosa_roxburghii Rroxscaffold_1G00030220 Rroxscaffold_2G00114820 Rroxscaffold_3G00219510 Rroxscaffold_3G00255600 Rroxscaffold_4G00304060 Rroxscaffold_4G00330360 Rroxscaffold_4G00330400 Rroxscaffold_5G00359920 Rroxscaffold_5G00359930 Rroxscaffold_5G00359960 Rroxscaffold_5G00366600 Rroxscaffold_5G00366630 Rroxscaffold_5G00366640 Rroxscaffold_5G00366710 Rroxscaffold_5G00366970
rosa_rugosa Rorug04G0138400 Rorug04G0138500 Rorug04G0138700 Rorug04G0140600 Rorug04G0199000 Rorug07G0061600
rosa_samantha Rh4AG255800 Rh4AG255900 Rh4AG256000 Rh4AG256200 Rh4BG261200 Rh4BG261300 Rh4BG261600 Rh4CG212100 Rh4CG212800 Rh4CG212900 Rh4CG272300 Rh4CG272500 Rh4CG272600 Rh4CG272800 Rh4CG275800 Rh4DG255800 Rh4DG255900 Rh4DG256200 Rh4DG257200 Rh4DG257300 Rh7BG190600 Rh7CG198100
rosa_wichuraiana Rw1G001980 Rw4G022090 Rw4G024000 Rw4G024010 Rw7G016430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 34
Acc36I ACCTGC 1 cut(s) 852
AccB1I GGYRCC 2 cut(s) 271, 979
AccB7I CCANNNNNTGG 1 cut(s) 877
AccI GTMKAC 3 cut(s) 38, 1001, 1176
AccII CGCG 2 cut(s) 336, 1230
AccIII TCCGGA 1 cut(s) 685
AciI CCGC 5 cut(s) 72, 105, 227, 336, 379
AclWI GGATC 2 cut(s) 164, 502
AcoI YGGCCR 1 cut(s) 337
AcsI RAATTY 4 cut(s) 473, 513, 692, 1299
AcuI CTGAAG 2 cut(s) 687, 957
AcvI CACGTG 2 cut(s) 263, 297
AcyI GRCGYC 1 cut(s) 1004
AfaI GTAC 3 cut(s) 734, 938, 990
AfiI CCNNNNNNNGG 6 cut(s) 48, 266, 300, 335, 877, 1108
AflIII ACRYGT 1 cut(s) 262
AgsI TTSAA 8 cut(s) 478, 596, 766, 822, 827, 1184, 1238, 1272
AjnI CCWGG 4 cut(s) 152, 180, 339, 832
AluBI AGCT 6 cut(s) 218, 615, 676, 727, 961, 1259
AluI AGCT 6 cut(s) 218, 615, 676, 727, 961, 1259
Alw21I GWGCWC 1 cut(s) 617
Alw26I GTCTC 3 cut(s) 62, 240, 394
AlwI GGATC 2 cut(s) 164, 502
AlwNI CAGNNNCTG 1 cut(s) 503
Ama87I CYCGRG 1 cut(s) 956
Aor13HI TCCGGA 1 cut(s) 685
AoxI GGCC 5 cut(s) 97, 321, 337, 342, 485
ApeKI GCWGC 3 cut(s) 74, 185, 188
ApoI RAATTY 4 cut(s) 473, 513, 692, 1299
AspLEI GCGC 2 cut(s) 899, 1230
AspS9I GGNCC 5 cut(s) 98, 343, 485, 628, 788
AsuHPI GGTGA 7 cut(s) 16, 73, 301, 391, 565, 893, 1339
AsuII TTCGAA 1 cut(s) 1303
AvaI CYCGRG 1 cut(s) 956
AvaII GGWCC 2 cut(s) 628, 788
BaeGI GKGCMC 1 cut(s) 274
BanI GGYRCC 2 cut(s) 271, 979
BanII GRGCYC 1 cut(s) 617
BauI CACGAG 2 cut(s) 254, 923
BbrPI CACGTG 2 cut(s) 263, 297
BbsI GAAGAC 3 cut(s) 32, 858, 1191
Bbv12I GWGCWC 1 cut(s) 617
BbvI GCAGC 3 cut(s) 61, 172, 175
BccI CCATC 5 cut(s) 128, 274, 518, 593, 1013
BceAI ACGGC 2 cut(s) 92, 371
BcgI CGANNNNNNTGC 2 cut(s) 74, 108
BciT130I CCWGG 4 cut(s) 154, 182, 341, 834
BclI TGATCA 2 cut(s) 916, 1044
BcoDI GTCTC 3 cut(s) 62, 240, 394
BfaI CTAG 3 cut(s) 446, 654, 1016
BfoI RGCGCY 1 cut(s) 900
BfuAI ACCTGC 1 cut(s) 852
BglII AGATCT 2 cut(s) 135, 448
BisI GCNGC 4 cut(s) 75, 186, 189, 337
BlsI GCNGC 4 cut(s) 76, 187, 190, 338
Bme1390I CCNGG 4 cut(s) 154, 182, 341, 834
Bme18I GGWCC 2 cut(s) 628, 788
BmeT110I CYCGRG 1 cut(s) 956
BmgT120I GGNCC 5 cut(s) 98, 343, 485, 628, 788
BmiI GGNNCC 4 cut(s) 100, 273, 640, 981
BmrFI CCNGG 4 cut(s) 154, 182, 341, 834
BpiI GAAGAC 3 cut(s) 32, 858, 1191
BpmI CTGGAG 2 cut(s) 525, 926
Bpu14I TTCGAA 1 cut(s) 1303
BpuEI CTTGAG 1 cut(s) 124
Bsa29I ATCGAT 1 cut(s) 123
BsaAI YACGTR 2 cut(s) 263, 297
BsaBI GATNNNNATC 2 cut(s) 1023, 1272
BsaHI GRCGYC 1 cut(s) 1004
BsaI GGTCTC 2 cut(s) 62, 240
BsaJI CCNNGG 2 cut(s) 152, 833
BsaWI WCCGGW 1 cut(s) 685
Bsc4I CCNNNNNNNGG 6 cut(s) 48, 266, 300, 335, 877, 1108
Bse118I RCCGGY 1 cut(s) 982
Bse1I ACTGG 3 cut(s) 508, 943, 1204
Bse8I GATNNNNATC 2 cut(s) 1023, 1272
BseAI TCCGGA 1 cut(s) 685
BseBI CCWGG 4 cut(s) 154, 182, 341, 834
BseCI ATCGAT 1 cut(s) 123
BseDI CCNNGG 2 cut(s) 152, 833
BseJI GATNNNNATC 2 cut(s) 1023, 1272
BseLI CCNNNNNNNGG 6 cut(s) 48, 266, 300, 335, 877, 1108
BseMII CTCAG 1 cut(s) 1046
BseNI ACTGG 3 cut(s) 508, 943, 1204
BseSI GKGCMC 1 cut(s) 274
BseXI GCAGC 3 cut(s) 61, 172, 175
BseYI CCCAGC 1 cut(s) 218
BsgI GTGCAG 1 cut(s) 319
Bsh1236I CGCG 2 cut(s) 336, 1230
BshFI GGCC 5 cut(s) 99, 323, 339, 344, 487
BshNI GGYRCC 2 cut(s) 271, 979
BshVI ATCGAT 1 cut(s) 123
BsiHKAI GWGCWC 1 cut(s) 617
BsiHKCI CYCGRG 1 cut(s) 956
BsiSI CCGG 2 cut(s) 686, 983
BslFI GGGAC 2 cut(s) 250, 379
BslI CCNNNNNNNGG 6 cut(s) 48, 266, 300, 335, 877, 1108
BsmAI GTCTC 3 cut(s) 62, 240, 394
BsmBI CGTCTC 1 cut(s) 394
BsmFI GGGAC 2 cut(s) 250, 379
BsnI GGCC 5 cut(s) 99, 323, 339, 344, 487
Bso31I GGTCTC 2 cut(s) 62, 240
BsoBI CYCGRG 1 cut(s) 956
Bsp119I TTCGAA 1 cut(s) 1303
Bsp1286I GDGCHC 2 cut(s) 274, 617
Bsp13I TCCGGA 1 cut(s) 685
Bsp143I GATC 9 cut(s) 135, 156, 448, 494, 566, 669, 916, 1044, 1281
BspACI CCGC 5 cut(s) 72, 105, 227, 336, 379
BspANI GGCC 5 cut(s) 99, 323, 339, 344, 487
BspCNI CTCAG 1 cut(s) 1045
BspDI ATCGAT 1 cut(s) 123
BspEI TCCGGA 1 cut(s) 685
BspFNI CGCG 2 cut(s) 336, 1230
BspLI GGNNCC 4 cut(s) 100, 273, 640, 981
BspMI ACCTGC 1 cut(s) 852
BspPI GGATC 2 cut(s) 164, 502
BspT104I TTCGAA 1 cut(s) 1303
BspT107I GGYRCC 2 cut(s) 271, 979
BspTNI GGTCTC 2 cut(s) 62, 240
BsrFI RCCGGY 1 cut(s) 982
BsrI ACTGG 3 cut(s) 508, 943, 1204
BssAI RCCGGY 1 cut(s) 982
BssECI CCNNGG 2 cut(s) 152, 833
BssMI GATC 9 cut(s) 135, 156, 448, 494, 566, 669, 916, 1044, 1281
BssNI GRCGYC 1 cut(s) 1004
BssSI CACGAG 2 cut(s) 254, 923
Bst2BI CACGAG 2 cut(s) 254, 923
Bst2UI CCWGG 4 cut(s) 154, 182, 341, 834
Bst4CI ACNGT 3 cut(s) 10, 541, 1130
Bst6I CTCTTC 2 cut(s) 773, 976
BstACI GRCGYC 1 cut(s) 1004
BstBAI YACGTR 2 cut(s) 263, 297
BstBI TTCGAA 1 cut(s) 1303
BstC8I GCNNGC 6 cut(s) 54, 97, 212, 216, 225, 647
BstDEI CTNAG 1 cut(s) 1032
BstEII GGTNACC 1 cut(s) 289
BstFNI CGCG 2 cut(s) 336, 1230
BstH2I RGCGCY 1 cut(s) 900
BstHHI GCGC 2 cut(s) 899, 1230
BstKTI GATC 9 cut(s) 138, 159, 451, 497, 569, 672, 919, 1047, 1284
BstMAI GTCTC 3 cut(s) 62, 240, 394
BstMBI GATC 9 cut(s) 135, 156, 448, 494, 566, 669, 916, 1044, 1281
BstMWI GCNNNNNNNGC 5 cut(s) 220, 224, 350, 858, 896
BstNI CCWGG 4 cut(s) 154, 182, 341, 834
BstPI GGTNACC 1 cut(s) 289
BstSCI CCNGG 4 cut(s) 152, 180, 339, 832
BstSLI GKGCMC 1 cut(s) 274
BstUI CGCG 2 cut(s) 336, 1230
BstV1I GCAGC 3 cut(s) 61, 172, 175
BstV2I GAAGAC 3 cut(s) 32, 858, 1191
BstX2I RGATCY 2 cut(s) 135, 448
BstXI CCANNNNNNTGG 2 cut(s) 218, 1211
BstYI RGATCY 2 cut(s) 135, 448
Bsu15I ATCGAT 1 cut(s) 123
BsuRI GGCC 5 cut(s) 99, 323, 339, 344, 487
BsuTUI ATCGAT 1 cut(s) 123
BtsIMutI CAGTG 3 cut(s) 546, 981, 1126
BveI ACCTGC 1 cut(s) 852
Cac8I GCNNGC 6 cut(s) 54, 97, 212, 216, 225, 647
CaiI CAGNNNCTG 1 cut(s) 503
CfoI GCGC 2 cut(s) 899, 1230
Cfr10I RCCGGY 1 cut(s) 982
Cfr13I GGNCC 5 cut(s) 98, 343, 485, 628, 788
ClaI ATCGAT 1 cut(s) 123
CseI GACGC 3 cut(s) 180, 987, 1012
Csp6I GTAC 3 cut(s) 733, 937, 989
CspCI CAANNNNNGTGG 2 cut(s) 1111, 1146
CviAII CATG 8 cut(s) 32, 64, 635, 710, 746, 857, 1039, 1083
CviQI GTAC 3 cut(s) 733, 937, 989
DdeI CTNAG 1 cut(s) 1032
DpnI GATC 9 cut(s) 137, 158, 450, 496, 568, 671, 918, 1046, 1283
DpnII GATC 9 cut(s) 135, 156, 448, 494, 566, 669, 916, 1044, 1281
DrdI GACNNNNNNGTC 1 cut(s) 34
DseDI GACNNNNNNGTC 1 cut(s) 34
EaeI YGGCCR 1 cut(s) 337
Eam1104I CTCTTC 2 cut(s) 773, 976
EarI CTCTTC 2 cut(s) 773, 976
Ecl136II GAGCTC 1 cut(s) 615
Eco24I GRGCYC 1 cut(s) 617
Eco31I GGTCTC 2 cut(s) 62, 240
Eco32I GATATC 3 cut(s) 1025, 1080, 1168
Eco47I GGWCC 2 cut(s) 628, 788
Eco53kI GAGCTC 1 cut(s) 615
Eco57I CTGAAG 2 cut(s) 687, 957
Eco72I CACGTG 2 cut(s) 263, 297
Eco88I CYCGRG 1 cut(s) 956
Eco91I GGTNACC 1 cut(s) 289
EcoICRI GAGCTC 1 cut(s) 615
EcoO109I RGGNCCY 1 cut(s) 343
EcoO65I GGTNACC 1 cut(s) 289
EcoRII CCWGG 4 cut(s) 152, 180, 339, 832
EcoRV GATATC 3 cut(s) 1025, 1080, 1168
EcoT38I GRGCYC 1 cut(s) 617
Esp3I CGTCTC 1 cut(s) 394
FaeI CATG 8 cut(s) 35, 67, 638, 713, 749, 860, 1042, 1086
FalI AAGNNNNNCTT 2 cut(s) 207, 239
FaqI GGGAC 2 cut(s) 250, 379
FatI CATG 8 cut(s) 31, 63, 634, 709, 745, 856, 1038, 1082
FauI CCCGC 1 cut(s) 386
FauNDI CATATG 1 cut(s) 793
FbaI TGATCA 2 cut(s) 916, 1044
FblI GTMKAC 3 cut(s) 38, 1001, 1176
Fnu4HI GCNGC 4 cut(s) 75, 186, 189, 337
FriOI GRGCYC 1 cut(s) 617
Fsp4HI GCNGC 4 cut(s) 75, 186, 189, 337
FspBI CTAG 3 cut(s) 446, 654, 1016
GlaI GCGC 2 cut(s) 898, 1229
GluI GCNGC 4 cut(s) 75, 186, 189, 337
GsaI CCCAGC 1 cut(s) 222
GsuI CTGGAG 2 cut(s) 525, 926
HaeII RGCGCY 1 cut(s) 900
HaeIII GGCC 5 cut(s) 99, 323, 339, 344, 487
HapII CCGG 2 cut(s) 686, 983
HgaI GACGC 3 cut(s) 180, 987, 1012
HhaI GCGC 2 cut(s) 899, 1230
Hin1I GRCGYC 1 cut(s) 1004
Hin1II CATG 8 cut(s) 35, 67, 638, 713, 749, 860, 1042, 1086
Hin6I GCGC 2 cut(s) 897, 1228
HinP1I GCGC 2 cut(s) 897, 1228
HincII GTYRAC 3 cut(s) 112, 1002, 1069
HindII GTYRAC 3 cut(s) 112, 1002, 1069
HindIII AAGCTT 1 cut(s) 674
HinfI GANTC 5 cut(s) 35, 436, 581, 968, 1268
HpaI GTTAAC 1 cut(s) 1069
HpaII CCGG 2 cut(s) 686, 983
HphI GGTGA 7 cut(s) 16, 73, 301, 391, 565, 893, 1339
Hpy166II GTNNAC 5 cut(s) 39, 112, 1002, 1069, 1177
Hpy188I TCNGA 6 cut(s) 279, 312, 499, 628, 1035, 1355
Hpy8I GTNNAC 5 cut(s) 39, 112, 1002, 1069, 1177
Hpy99I CGWCG 5 cut(s) 196, 199, 1003, 1006, 1199
HpyAV CCTTC 6 cut(s) 260, 334, 406, 436, 1038, 1318
HpyCH4III ACNGT 3 cut(s) 10, 541, 1130
HpyCH4IV ACGT 2 cut(s) 262, 296
HpyCH4V TGCA 3 cut(s) 300, 353, 1315
HpyF10VI GCNNNNNNNGC 5 cut(s) 220, 224, 350, 858, 896
HpyF3I CTNAG 1 cut(s) 1032
HpySE526I ACGT 2 cut(s) 262, 296
Hsp92I GRCGYC 1 cut(s) 1004
Hsp92II CATG 8 cut(s) 35, 67, 638, 713, 749, 860, 1042, 1086
HspAI GCGC 2 cut(s) 897, 1228
Kpn2I TCCGGA 1 cut(s) 685
Ksp22I TGATCA 2 cut(s) 916, 1044
KspAI GTTAAC 1 cut(s) 1069
Kzo9I GATC 9 cut(s) 135, 156, 448, 494, 566, 669, 916, 1044, 1281
LmnI GCTCC 2 cut(s) 612, 758
Lsp1109I GCAGC 3 cut(s) 61, 172, 175
MaeI CTAG 3 cut(s) 446, 654, 1016
MaeII ACGT 2 cut(s) 262, 296
MaeIII GTNAC 4 cut(s) 4, 79, 289, 1249
MalI GATC 9 cut(s) 137, 158, 450, 496, 568, 671, 918, 1046, 1283
MboI GATC 9 cut(s) 135, 156, 448, 494, 566, 669, 916, 1044, 1281
MboII GAAGA 9 cut(s) 25, 37, 790, 822, 858, 963, 1064, 1196, 1333
MflI RGATCY 2 cut(s) 135, 448
MhlI GDGCHC 2 cut(s) 274, 617
MluCI AATT 9 cut(s) 473, 513, 559, 692, 822, 1089, 1159, 1219, 1299
MlyI GAGTC 2 cut(s) 44, 962
MmeI TCCRAC 2 cut(s) 606, 1126
MroI TCCGGA 1 cut(s) 685
MseI TTAA 3 cut(s) 162, 963, 1068
MslI CAYNNNNRTG 1 cut(s) 927
MspA1I CMGCKG 1 cut(s) 74
MspI CCGG 2 cut(s) 686, 983
MspR9I CCNGG 4 cut(s) 154, 182, 341, 834
MvaI CCWGG 4 cut(s) 154, 182, 341, 834
MvnI CGCG 2 cut(s) 336, 1230
MwoI GCNNNNNNNGC 5 cut(s) 220, 224, 350, 858, 896
NdeI CATATG 1 cut(s) 793
NdeII GATC 9 cut(s) 135, 156, 448, 494, 566, 669, 916, 1044, 1281
NlaIII CATG 8 cut(s) 35, 67, 638, 713, 749, 860, 1042, 1086
NlaIV GGNNCC 4 cut(s) 100, 273, 640, 981
NmeAIII GCCGAG 1 cut(s) 269
NmuCI GTSAC 3 cut(s) 4, 79, 289
NspV TTCGAA 1 cut(s) 1303
PaeR7I CTCGAG 1 cut(s) 956
PfeI GAWTC 3 cut(s) 436, 581, 1268
PflMI CCANNNNNTGG 1 cut(s) 877
PkrI GCNGC 4 cut(s) 76, 187, 190, 338
PleI GAGTC 2 cut(s) 43, 962
PmaCI CACGTG 2 cut(s) 263, 297
PmlI CACGTG 2 cut(s) 263, 297
PpsI GAGTC 2 cut(s) 43, 962
Ppu21I YACGTR 2 cut(s) 263, 297
Psp124BI GAGCTC 1 cut(s) 617
Psp6I CCWGG 4 cut(s) 152, 180, 339, 832
PspCI CACGTG 2 cut(s) 263, 297
PspEI GGTNACC 1 cut(s) 289
PspFI CCCAGC 1 cut(s) 218
PspGI CCWGG 4 cut(s) 152, 180, 339, 832
PspN4I GGNNCC 4 cut(s) 100, 273, 640, 981
PspPI GGNCC 5 cut(s) 98, 343, 485, 628, 788
PstNI CAGNNNCTG 1 cut(s) 503
PsuI RGATCY 2 cut(s) 135, 448
RsaI GTAC 3 cut(s) 734, 938, 990
RsaNI GTAC 3 cut(s) 733, 937, 989
RseI CAYNNNNRTG 1 cut(s) 927
SacI GAGCTC 1 cut(s) 617
SalI GTCGAC 1 cut(s) 1000
SaqAI TTAA 3 cut(s) 162, 963, 1068
SatI GCNGC 4 cut(s) 75, 186, 189, 337
Sau3AI GATC 9 cut(s) 135, 156, 448, 494, 566, 669, 916, 1044, 1281
Sau96I GGNCC 5 cut(s) 98, 343, 485, 628, 788
SchI GAGTC 2 cut(s) 44, 962
ScrFI CCNGG 4 cut(s) 154, 182, 341, 834
SduI GDGCHC 2 cut(s) 274, 617
Sfr274I CTCGAG 1 cut(s) 956
SfuI TTCGAA 1 cut(s) 1303
SgrDI CGTCGACG 1 cut(s) 1000
SinI GGWCC 2 cut(s) 628, 788
SlaI CTCGAG 1 cut(s) 956
SmiMI CAYNNNNRTG 1 cut(s) 927
SmlI CTYRAG 2 cut(s) 139, 956
SmoI CTYRAG 2 cut(s) 139, 956
Sse9I AATT 9 cut(s) 473, 513, 559, 692, 822, 1089, 1159, 1219, 1299
SsiI CCGC 5 cut(s) 72, 105, 227, 336, 379
SspMI CTAG 3 cut(s) 446, 654, 1016
SstI GAGCTC 1 cut(s) 617
StyD4I CCNGG 4 cut(s) 152, 180, 339, 832
TaaI ACNGT 3 cut(s) 10, 541, 1130
TaiI ACGT 2 cut(s) 265, 299
TaqI TCGA 6 cut(s) 123, 432, 957, 1001, 1276, 1303
TasI AATT 9 cut(s) 473, 513, 559, 692, 822, 1089, 1159, 1219, 1299
TauI GCSGC 1 cut(s) 339
TfiI GAWTC 3 cut(s) 436, 581, 1268
Tru1I TTAA 3 cut(s) 162, 963, 1068
Tru9I TTAA 3 cut(s) 162, 963, 1068
TscAI CASTG 3 cut(s) 546, 981, 1133
TseFI GTSAC 3 cut(s) 4, 79, 289
TseI GCWGC 3 cut(s) 74, 185, 188
Tsp45I GTSAC 3 cut(s) 4, 79, 289
TspDTI ATGAA 4 cut(s) 418, 698, 845, 945
TspRI CASTG 3 cut(s) 546, 981, 1133
Van91I CCANNNNNTGG 1 cut(s) 877
VpaK11BI GGWCC 2 cut(s) 628, 788
XapI RAATTY 4 cut(s) 473, 513, 692, 1299
XbaI TCTAGA 2 cut(s) 445, 1015
XcmI CCANNNNNNNNNTGG 1 cut(s) 1208
XhoI CTCGAG 1 cut(s) 956
XmiI GTMKAC 3 cut(s) 38, 1001, 1176
XspI CTAG 3 cut(s) 446, 654, 1016
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.