RLG00000028432

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000330
Physical Location & Seq
Reverse (-)
22750591 .. 22756324
5734 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028432

Sequence Viewer

Length: 2784 bp
ATGGGTTTTCTCTATCTCCTCTTCATCTTCACACTTTCATCACTTTTGCTCTTCCTAGCCTTCGTCTCGTTTCTCATACTCAAACTCTACACAGGCAAGTCTATCAAAGACCCAAACTATCCACCTGTAAAAGGCACCGTCTTCCACCAGCTCTTTTATTTCAACAAACTTTACGACCACGAAGCCGAAATCGCCAGAGAAAACCCTACTTACCGGCTACTCGCGGCGGACCACAGCGCTATATATACGTGCGATCCAAGAAACATCGAGCACATGCTCAAAACCAGATTTGCTCACTACACGAAAGGGGAGTATAACCAGACTATTGTCAGTGATGTTTTTGGGCATGGGATTTTTGCTGTGGATGGAGATAAGTGGAGGCAACAGAGGAAGCTTGCAAGTTTCGAGTTTTCGACAAGGGTTTTGAGGGATTTTAGCTGTTCTGTCTTCAGAAGAAATGCTGCAAAAATTGTCAGAAAGGTTTCGGAGCTTTCCGAGTCCAGTGAGGTTTTTGATATGCAGGATTTGCTTATGAGATGTACCCTGGATTCCATATTCAAAGTTGGATTTGGAATAGAACTGAATTGCTTGGAGGGGTCAAGCAAAGAAGGGCTAGCATTCATGAAGGCATTTGATGAGTCAACTGCTCTGACCTATTGGCGCTATGTTGATCCATTCTGGAAATTGAAAAGATTTCTCAACAATGGTTCTGAAGCCACCCTTAGAAACTATGTCAAAGTTATTCATGACTTTGTGCACCAACTTATCAGGAGAAAGAGGACATTGCTAGCTAGCCAGAAAGATGGTAATGACAAGGAGGACATACTGTCAAGGTTTCTATTGGAGAGTGAGAAGAATCCGGAGGACATGAATGATAAATATCTATGTGACATAATTCTGAACTTCATGATTGCTGGGAAAGATACCAGTGCAAATACACTCTCATGGTTCTTCTACATGCTCAGCAAGAACCCTCTAATACAGGAAAAAGTCGCACAAGAAGTGAGGGATGTTGTTGGTCTGGATCATGAAGCCAACATTTATGAATTTGTGGCCAATATAACTGATGCAGCTCTTGAAAAAATGCACTATCTTCATGCGGCAATAACAGAGACCCTGAGGCTATACCCAGCAGTTCCTATTGATGGTAGAAGTGCAGAGGTAGATGACATTCTTCCTGATGGCTTTAGAGTGAAAAAAGGAGATAGTGTCAACTACATGAGTTATGCCATGGGCAGAATGCCTTATATTTGGGGAAAGGATGCAGAGGAGTTTAGACCTGAAAGATGGCTCAACAATGGAATTTTCCAGCCGGAATCACCTTTCAAATTTGTTGCATTTCATGCTGGTCCTCGGATCTGTCTGGGGAAGGACTTTGCTTATCGGCAGATGAAGATAGTAGCAATGGCTCTTCTTTGCTTCTTCCGCTTCAAGATCTTCACAGGCAAGTCCATCAGAGACCCAAGCTACCCGCCTGTAAAAGGCACCGTTTTTCACCAGCTCTTATACTTCACCAAACTCTATGACCACCAAACCCAAATAGCCAGAGAAACCCCAACTTACCGGCTTCTTTCTCCTAACCACAGCTCTGGGATATTTGTTGTTGATGGAGAGAAGTGGAGGCAGCAGAGGAAGCTTGCAAGTATGGAATTCTCGACCAGGATTCTTAGAGATTTTAGCTGCTCCGTGTTTAGAAGAAATGCAGCCAAACTGGTTAAAGTTGTTCATGAGTTTTCAGATTCCAATTGTTCTTTTGATATGCAGGACTTGCTTATGAGATGTACCTTGGATTCAATATTCAAAGTTGGGTTTGGAATAGAGCTGAATTGCCTGGAGGAGTCAAGCAAATCAGGGTTAGGATTTATGAAGGCTTTTGATGAGTCAACTTCTCTGACTTACCGGCGATATGTTGATCCATTCTGGAAAGTTAAAAAATTTCTGAACTTTGGTTCTGAGGCCAGCCTTAGAAAGTATGTCAAAGTCATTAACGATTTTGTGGACCATCTAATCAGGAGCAAGAGGAAATTGCTAGCTGGGGAGAAAGCTGGTAATGACAAGGAGGACATATTATCGAGGTTCCTTGTGGAAAGTGAGAAGGATCCGGAGCAAATGAATGACAAATATCTAAGTGATATAATTCTGAATTTTATGATTGCTGGCAAAGATACAAGTGCAAATACACTCTCATGGTTCTTCTACATGCTCAGCAAGAACCCTTTAATACAGGAGAAAGTTGCACAAGAAGTGATGGATGTCGTTAGTCTAAATCATGAAGCTAACATTGATGACTTTGTGGCAGATATAACTGATGCAGCTCTCGAACAAATGCATTATCTTCACGCTACTCTAACTGAGACTTTGAGGCTATATCCTGCAGTTCCCCTGGATGGGAGATCTGCTGAGGTAGATGACATTCTTCCTGATGGCTTTAGAGTGAAAAAAGGAGATCGAATAACCTATATGGCCTATGCCATGGGAAGAATGCCTTACATATGGGGAAACGATGCTGAGGATTTCCGACCTGAAAGATGGCTTGAGAATGGAATTTTCAAGCCAGAGTCACCTTTCAAATTCGTTGCATTTCATGCAGGGCCTCGGATCTGTCTAGGGAAGGACTTTGCGTACCGACAGATGAAGATAGTAGCAATGGCTCTTCTCTGCTTTTTCCGCTTCAAATTGGCTGATGAGACAAAGAACGTAACCTATAGAACTATGTTCACCCTTCACATGGATTGCAGCCTCACTATGCTTGCAGTTCCAAGGAAATCCTTGAACATTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

928

Amino Acids

107.34

Weight (kDa)

8.28

Isoelectric Point (pI)

39.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 55 - 503 1.1e-77 Cytochrome P450
p450 PF00067 515 - 901 6e-75 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000330)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G44890 AT2G44890 AT2G45510
fragaria_vesca FvH4_7g12200 FvH4_7g12250 FvH4_7g12281 FvH4_7g12281 FvH4_7g12281 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12300 FvH4_7g12310
malus_domestica MD02G1200000.v1.1 MD02G1200100.v1.1 MD02G1200300.v1.1 MD02G1200400.v1.1 MD02G1200500.v1.1 MD02G1200600.v1.1 MD02G1200700.v1.1
prunus_persica Prupe.2G148400_v2.0.a1 Prupe.2G148500_v2.0.a1 Prupe.2G148600_v2.0.a1 Prupe.2G148700_v2.0.a1
pyrus_communis pycom02g16390
rosa_chinensis RchiOBHm_Chr1g0350941 RchiOBHm_Chr1g0350951 RchiOBHm_Chr1g0350981 RchiOBHm_Chr1g0350991 RchiOBHm_Chr1g0351001 RchiOBHm_Chr1g0351031 RchiOBHm_Chr1g0351061 RchiOBHm_Chr1g0351071 RchiOBHm_Chr1g0351081 RchiOBHm_Chr1g0351091 RchiOBHm_Chr1g0351101 RchiOBHm_Chr1g0375431 RchiOBHm_Chr2g0142281
rosa_laevigata RLG00000026651 RLG00000028432 RLG00000028433 RLG00000028435 RLG00000028436 RLG00000028437 RLG00000028438 RLG00000028439
rosa_multiflora Rmu_co7992102.1_g000001 Rmu_sc0000429.1_g000085 Rmu_sc0002665.1_g000014 Rmu_sc0002665.1_g000018 Rmu_sc0006087.1_g000001 Rmu_sc0006458.1_g000011 Rmu_sc0008688.1_g000002 Rmu_sc0008688.1_g000006 Rmu_sc0009646.1_g000012 Rmu_sc0032693.1_g000003
rosa_roxburghii Rroxscaffold_4G00304080 Rroxscaffold_4G00304120 Rroxscaffold_4G00304150 Rroxscaffold_4G00304170 Rroxscaffold_4G00304180 Rroxscaffold_4G00304190 Rroxscaffold_4G00304210 Rroxscaffold_4G00304230 Rroxscaffold_4G00304280
rosa_rugosa Rorug01G0075700 Rorug01G0215400 Rorug01G0216000 Rorug01G0216100 Rorug01G0216200 Rorug01G0216300 Rorug01G0216300 Rorug01G0216300 Rorug02G0238800 Rorug04G0006700 Rorug06G0023400
rosa_samantha Rh1AG230300 Rh1AG230400 Rh1AG230700 Rh1AG230800 Rh1BG200100 Rh1BG200200 Rh1BG200600 Rh1DG227900 Rh1DG228000 Rh1DG228200
rosa_wichuraiana Rw0G010880 Rw1G019960 Rw1G019970 Rw1G019990 Rw1G020000 Rw1G020010 Rw1G020040 Rw1G020050 Rw1G020060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 134, 1484
AccII CGCG 1 cut(s) 224
AccIII TCCGGA 2 cut(s) 859, 2101
AciI CCGC 6 cut(s) 224, 227, 1100, 1426, 1472, 2668
AclWI GGATC 8 cut(s) 248, 665, 1032, 1364, 1907, 2093, 2106, 2606
AcoI YGGCCR 1 cut(s) 1053
AcsI RAATTY 8 cut(s) 1046, 1302, 1328, 1649, 1934, 2143, 2544, 2570
AcuI CTGAAG 2 cut(s) 433, 732
AfaI GTAC 3 cut(s) 541, 1783, 2624
AfeI AGCGCT 1 cut(s) 238
AfiI CCNNNNNNNGG 6 cut(s) 131, 1145, 1481, 2387, 2388, 2728
AhdI GACNNNNNGTC 1 cut(s) 826
AjnI CCWGG 4 cut(s) 543, 1658, 1830, 2382
Alw21I GWGCWC 2 cut(s) 273, 759
Alw26I GTCTC 5 cut(s) 70, 1106, 1452, 2348, 2681
Alw44I GTGCAC 1 cut(s) 755
AlwI GGATC 8 cut(s) 248, 665, 1032, 1364, 1907, 2093, 2106, 2606
Aor13HI TCCGGA 2 cut(s) 859, 2101
Aor51HI AGCGCT 1 cut(s) 238
AoxI GGCC 4 cut(s) 1053, 1956, 2463, 2591
ApaLI GTGCAC 1 cut(s) 755
ApeKI GCWGC 7 cut(s) 461, 1070, 1624, 1680, 1703, 2312, 2736
ApoI RAATTY 8 cut(s) 1046, 1302, 1328, 1649, 1934, 2143, 2544, 2570
ArsI GACNNNNNNTTYG 2 cut(s) 406, 438
Asp700I GAANNNNTTC 1 cut(s) 481
AspLEI GCGC 2 cut(s) 239, 663
AspS9I GGNCC 4 cut(s) 229, 1349, 1999, 2591
AsuHPI GGTGA 5 cut(s) 1311, 1487, 1504, 2553, 2710
AsuNHI GCTAGC 4 cut(s) 613, 787, 791, 2029
AvaII GGWCC 3 cut(s) 229, 1349, 1999
AxyI CCTNAGG 1 cut(s) 1118
BaeGI GKGCMC 1 cut(s) 759
BalI TGGCCA 1 cut(s) 1055
BamHI GGATCC 1 cut(s) 2098
BanI GGYRCC 2 cut(s) 134, 1484
BbsI GAAGAC 2 cut(s) 133, 439
Bbv12I GWGCWC 2 cut(s) 273, 759
BbvCI CCTCAGC 2 cut(s) 2400, 2508
BbvI GCAGC 7 cut(s) 448, 1082, 1636, 1667, 1715, 2324, 2748
BciT130I CCWGG 4 cut(s) 545, 1660, 1832, 2384
BcoDI GTCTC 5 cut(s) 70, 1106, 1452, 2348, 2681
BfaI CTAG 6 cut(s) 56, 614, 788, 792, 2030, 2606
BfmI CTRYAG 2 cut(s) 2373, 2704
BfoI RGCGCY 2 cut(s) 240, 664
BglII AGATCT 2 cut(s) 1434, 2393
BisI GCNGC 9 cut(s) 225, 462, 1071, 1101, 1625, 1681, 1704, 2313, 2737
BlpI GCTNAGC 2 cut(s) 962, 2204
BlsI GCNGC 9 cut(s) 226, 463, 1072, 1102, 1626, 1682, 1705, 2314, 2738
Bme1390I CCNGG 4 cut(s) 545, 1660, 1832, 2384
Bme18I GGWCC 3 cut(s) 229, 1349, 1999
BmeRI GACNNNNNGTC 1 cut(s) 826
BmgT120I GGNCC 4 cut(s) 229, 1349, 1999, 2591
BmiI GGNNCC 4 cut(s) 136, 1486, 2078, 2100
BmrFI CCNGG 4 cut(s) 545, 1660, 1832, 2384
BmsI GCATC 4 cut(s) 1057, 1252, 2299, 2494
BmtI GCTAGC 4 cut(s) 617, 791, 795, 2033
BoxI GACNNNNGTC 1 cut(s) 326
BpiI GAAGAC 2 cut(s) 133, 439
BpmI CTGGAG 1 cut(s) 1853
Bpu10I CCTNAGC 2 cut(s) 2400, 2508
Bpu1102I GCTNAGC 2 cut(s) 962, 2204
BpuEI CTTGAG 1 cut(s) 2555
BsaAI YACGTR 1 cut(s) 249
BsaBI GATNNNNATC 1 cut(s) 879
BsaI GGTCTC 2 cut(s) 1106, 1452
BsaJI CCNNGG 8 cut(s) 543, 1230, 1352, 1785, 2382, 2472, 2594, 2759
BsaWI WCCGGW 2 cut(s) 859, 2101
BsaXI ACNNNNNCTCC 2 cut(s) 1194, 1224
Bsc4I CCNNNNNNNGG 6 cut(s) 131, 1145, 1481, 2387, 2388, 2728
Bse118I RCCGGY 3 cut(s) 213, 1563, 1899
Bse1I ACTGG 3 cut(s) 501, 927, 1716
Bse21I CCTNAGG 1 cut(s) 1118
Bse3DI GCAATG 3 cut(s) 782, 1410, 2652
Bse8I GATNNNNATC 1 cut(s) 879
BseAI TCCGGA 2 cut(s) 859, 2101
BseBI CCWGG 4 cut(s) 545, 1660, 1832, 2384
BseDI CCNNGG 8 cut(s) 543, 1230, 1352, 1785, 2382, 2472, 2594, 2759
BseGI GGATG 5 cut(s) 370, 1015, 1267, 2257, 2392
BseJI GATNNNNATC 1 cut(s) 879
BseLI CCNNNNNNNGG 6 cut(s) 131, 1145, 1481, 2387, 2388, 2728
BseMI GCAATG 3 cut(s) 782, 1410, 2652
BseMII CTCAG 7 cut(s) 976, 1109, 1944, 2218, 2343, 2391, 2499
BseNI ACTGG 3 cut(s) 501, 927, 1716
BseRI GAGGAG 3 cut(s) 8, 1283, 1850
BseSI GKGCMC 1 cut(s) 759
BseXI GCAGC 7 cut(s) 448, 1082, 1636, 1667, 1715, 2324, 2748
BseYI CCCAGC 3 cut(s) 914, 1129, 2033
BsgI GTGCAG 1 cut(s) 1176
Bsh1236I CGCG 1 cut(s) 224
BshFI GGCC 4 cut(s) 1055, 1958, 2465, 2593
BshNI GGYRCC 2 cut(s) 134, 1484
BsiHKAI GWGCWC 2 cut(s) 273, 759
BsiSI CCGG 6 cut(s) 214, 860, 1313, 1564, 1900, 2102
BslI CCNNNNNNNGG 6 cut(s) 131, 1145, 1481, 2387, 2388, 2728
BsmAI GTCTC 5 cut(s) 70, 1106, 1452, 2348, 2681
BsmBI CGTCTC 1 cut(s) 70
BsmI GAATGC 3 cut(s) 617, 1245, 2487
BsnI GGCC 4 cut(s) 1055, 1958, 2465, 2593
Bso31I GGTCTC 2 cut(s) 1106, 1452
Bsp1286I GDGCHC 2 cut(s) 273, 759
Bsp13I TCCGGA 2 cut(s) 859, 2101
Bsp1720I GCTNAGC 2 cut(s) 962, 2204
Bsp19I CCATGG 2 cut(s) 1230, 2472
BspACI CCGC 6 cut(s) 224, 227, 1100, 1426, 1472, 2668
BspANI GGCC 4 cut(s) 1055, 1958, 2465, 2593
BspCNI CTCAG 7 cut(s) 975, 1110, 1945, 2217, 2344, 2392, 2500
BspEI TCCGGA 2 cut(s) 859, 2101
BspFNI CGCG 1 cut(s) 224
BspHI TCATGA 7 cut(s) 621, 745, 906, 1027, 1726, 2269, 2780
BspLI GGNNCC 4 cut(s) 136, 1486, 2078, 2100
BspMAI CTGCAG 1 cut(s) 2377
BspOI GCTAGC 4 cut(s) 617, 791, 795, 2033
BspPI GGATC 8 cut(s) 248, 665, 1032, 1364, 1907, 2093, 2106, 2606
BspQI GCTCTTC 3 cut(s) 56, 1416, 2658
BspT107I GGYRCC 2 cut(s) 134, 1484
BspTNI GGTCTC 2 cut(s) 1106, 1452
BsrDI GCAATG 3 cut(s) 782, 1410, 2652
BsrFI RCCGGY 3 cut(s) 213, 1563, 1899
BsrI ACTGG 3 cut(s) 501, 927, 1716
BssAI RCCGGY 3 cut(s) 213, 1563, 1899
BssECI CCNNGG 8 cut(s) 543, 1230, 1352, 1785, 2382, 2472, 2594, 2759
BssT1I CCWWGG 4 cut(s) 1230, 1785, 2472, 2759
Bst2UI CCWGG 4 cut(s) 545, 1660, 1832, 2384
Bst4CI ACNGT 3 cut(s) 139, 828, 1489
Bst6I CTCTTC 4 cut(s) 26, 56, 1416, 2658
BstAPI GCANNNNNTGC 4 cut(s) 526, 1343, 1768, 2585
BstBAI YACGTR 1 cut(s) 249
BstC8I GCNNGC 9 cut(s) 396, 615, 789, 793, 1638, 1960, 2031, 2158, 2751
BstDSI CCRYGG 2 cut(s) 1230, 2472
BstENI CCTNNNNNAGG 2 cut(s) 129, 1479
BstF5I GGATG 5 cut(s) 370, 1015, 1267, 2257, 2392
BstFNI CGCG 1 cut(s) 224
BstH2I RGCGCY 2 cut(s) 240, 664
BstHHI GCGC 2 cut(s) 239, 663
BstMAI GTCTC 5 cut(s) 70, 1106, 1452, 2348, 2681
BstMWI GCNNNNNNNGC 8 cut(s) 191, 526, 1343, 1425, 1633, 1768, 2585, 2667
BstNI CCWGG 4 cut(s) 545, 1660, 1832, 2384
BstNSI RCATGY 3 cut(s) 277, 961, 2203
BstPAI GACNNNNGTC 1 cut(s) 326
BstSCI CCNGG 4 cut(s) 543, 1658, 1830, 2382
BstSFI CTRYAG 2 cut(s) 2373, 2704
BstSLI GKGCMC 1 cut(s) 759
BstUI CGCG 1 cut(s) 224
BstV1I GCAGC 7 cut(s) 448, 1082, 1636, 1667, 1715, 2324, 2748
BstV2I GAAGAC 2 cut(s) 133, 439
BstX2I RGATCY 5 cut(s) 1356, 1434, 2098, 2393, 2598
BstXI CCANNNNNNTGG 2 cut(s) 803, 1589
BstYI RGATCY 5 cut(s) 1356, 1434, 2098, 2393, 2598
Bsu36I CCTNAGG 1 cut(s) 1118
BsuRI GGCC 4 cut(s) 1055, 1958, 2465, 2593
BtgI CCRYGG 2 cut(s) 1230, 2472
BtsCI GGATG 5 cut(s) 370, 1015, 1267, 2257, 2392
BtsIMutI CAGTG 3 cut(s) 337, 508, 934
Cac8I GCNNGC 9 cut(s) 396, 615, 789, 793, 1638, 1960, 2031, 2158, 2751
CciI TCATGA 7 cut(s) 621, 745, 906, 1027, 1726, 2269, 2780
CfoI GCGC 2 cut(s) 239, 663
Cfr10I RCCGGY 3 cut(s) 213, 1563, 1899
Cfr13I GGNCC 4 cut(s) 229, 1349, 1999, 2591
Csp6I GTAC 3 cut(s) 540, 1782, 2623
CviQI GTAC 3 cut(s) 540, 1782, 2623
DriI GACNNNNNGTC 1 cut(s) 826
EaeI YGGCCR 1 cut(s) 1053
Eam1104I CTCTTC 4 cut(s) 26, 56, 1416, 2658
Eam1105I GACNNNNNGTC 1 cut(s) 826
EarI CTCTTC 4 cut(s) 26, 56, 1416, 2658
EciI GGCGGA 1 cut(s) 242
Eco130I CCWWGG 4 cut(s) 1230, 1785, 2472, 2759
Eco31I GGTCTC 2 cut(s) 1106, 1452
Eco47I GGWCC 3 cut(s) 229, 1349, 1999
Eco47III AGCGCT 1 cut(s) 238
Eco57I CTGAAG 2 cut(s) 433, 732
Eco81I CCTNAGG 1 cut(s) 1118
EcoNI CCTNNNNNAGG 2 cut(s) 129, 1479
EcoO109I RGGNCCY 1 cut(s) 2591
EcoRI GAATTC 1 cut(s) 1649
EcoRII CCWGG 4 cut(s) 543, 1658, 1830, 2382
EcoT14I CCWWGG 4 cut(s) 1230, 1785, 2472, 2759
EcoT22I ATGCAT 1 cut(s) 2331
ErhI CCWWGG 4 cut(s) 1230, 1785, 2472, 2759
Esp3I CGTCTC 1 cut(s) 70
FalI AAGNNNNNCTT 4 cut(s) 705, 737, 2470, 2502
FauI CCCGC 1 cut(s) 1479
FauNDI CATATG 1 cut(s) 2492
Fnu4HI GCNGC 9 cut(s) 225, 462, 1071, 1101, 1625, 1681, 1704, 2313, 2737
FokI GGATG 5 cut(s) 377, 1022, 1274, 2264, 2399
Fsp4HI GCNGC 9 cut(s) 225, 462, 1071, 1101, 1625, 1681, 1704, 2313, 2737
FspBI CTAG 6 cut(s) 56, 614, 788, 792, 2030, 2606
GlaI GCGC 2 cut(s) 238, 662
GluI GCNGC 9 cut(s) 225, 462, 1071, 1101, 1625, 1681, 1704, 2313, 2737
GsaI CCCAGC 3 cut(s) 918, 1133, 2037
GsuI CTGGAG 1 cut(s) 1853
HaeII RGCGCY 2 cut(s) 240, 664
HaeIII GGCC 4 cut(s) 1055, 1958, 2465, 2593
HapII CCGG 6 cut(s) 214, 860, 1313, 1564, 1900, 2102
HhaI GCGC 2 cut(s) 239, 663
Hin6I GCGC 2 cut(s) 237, 661
HinP1I GCGC 2 cut(s) 237, 661
HincII GTYRAC 3 cut(s) 642, 1213, 1884
HindII GTYRAC 3 cut(s) 642, 1213, 1884
HindIII AAGCTT 2 cut(s) 392, 1634
HpaII CCGG 6 cut(s) 214, 860, 1313, 1564, 1900, 2102
HphI GGTGA 5 cut(s) 1311, 1487, 1504, 2553, 2710
Hpy166II GTNNAC 6 cut(s) 642, 757, 1213, 1884, 1999, 2718
Hpy8I GTNNAC 6 cut(s) 642, 757, 1213, 1884, 1999, 2718
HpyAV CCTTC 8 cut(s) 70, 602, 619, 1363, 1861, 2089, 2605, 2732
HpyCH4III ACNGT 3 cut(s) 139, 828, 1489
HpyCH4IV ACGT 2 cut(s) 248, 2697
HpyF10VI GCNNNNNNNGC 8 cut(s) 191, 526, 1343, 1425, 1633, 1768, 2585, 2667
HpySE526I ACGT 2 cut(s) 248, 2697
HspAI GCGC 2 cut(s) 237, 661
Kpn2I TCCGGA 2 cut(s) 859, 2101
LguI GCTCTTC 3 cut(s) 56, 1416, 2658
LmnI GCTCC 4 cut(s) 487, 1688, 2013, 2104
Lsp1109I GCAGC 7 cut(s) 448, 1082, 1636, 1667, 1715, 2324, 2748
LweI GCATC 4 cut(s) 1057, 1252, 2299, 2494
MaeI CTAG 6 cut(s) 56, 614, 788, 792, 2030, 2606
MaeII ACGT 2 cut(s) 248, 2697
MaeIII GTNAC 3 cut(s) 887, 2559, 2698
MfeI CAATTG 1 cut(s) 1744
MflI RGATCY 5 cut(s) 1356, 1434, 2098, 2393, 2598
MhlI GDGCHC 2 cut(s) 273, 759
MlsI TGGCCA 1 cut(s) 1055
MluNI TGGCCA 1 cut(s) 1055
MlyI GAGTC 5 cut(s) 506, 647, 1847, 1889, 2567
MmeI TCCRAC 2 cut(s) 544, 2542
Mox20I TGGCCA 1 cut(s) 1055
Mph1103I ATGCAT 1 cut(s) 2331
MroI TCCGGA 2 cut(s) 859, 2101
MroXI GAANNNNTTC 1 cut(s) 481
MscI TGGCCA 1 cut(s) 1055
MseI TTAA 4 cut(s) 1716, 1929, 1986, 2219
MslI CAYNNNNRTG 2 cut(s) 943, 2185
Msp20I TGGCCA 1 cut(s) 1055
MspI CCGG 6 cut(s) 214, 860, 1313, 1564, 1900, 2102
MspR9I CCNGG 4 cut(s) 545, 1660, 1832, 2384
MunI CAATTG 1 cut(s) 1744
Mva1269I GAATGC 3 cut(s) 617, 1245, 2487
MvaI CCWGG 4 cut(s) 545, 1660, 1832, 2384
MvnI CGCG 1 cut(s) 224
MwoI GCNNNNNNNGC 8 cut(s) 191, 526, 1343, 1425, 1633, 1768, 2585, 2667
NcoI CCATGG 2 cut(s) 1230, 2472
NdeI CATATG 1 cut(s) 2492
NheI GCTAGC 4 cut(s) 613, 787, 791, 2029
NlaIV GGNNCC 4 cut(s) 136, 1486, 2078, 2100
NmuCI GTSAC 2 cut(s) 887, 2559
NsiI ATGCAT 1 cut(s) 2331
NspI RCATGY 3 cut(s) 277, 961, 2203
PagI TCATGA 7 cut(s) 621, 745, 906, 1027, 1726, 2269, 2780
PciSI GCTCTTC 3 cut(s) 56, 1416, 2658
PctI GAATGC 3 cut(s) 617, 1245, 2487
PdmI GAANNNNTTC 1 cut(s) 481
PfeI GAWTC 6 cut(s) 548, 856, 1316, 1663, 1739, 1790
PkrI GCNGC 9 cut(s) 226, 463, 1072, 1102, 1626, 1682, 1705, 2314, 2738
PleI GAGTC 5 cut(s) 505, 646, 1846, 1888, 2566
PpsI GAGTC 5 cut(s) 505, 646, 1846, 1888, 2566
Ppu21I YACGTR 1 cut(s) 249
PshAI GACNNNNGTC 1 cut(s) 326
Psp6I CCWGG 4 cut(s) 543, 1658, 1830, 2382
PspFI CCCAGC 3 cut(s) 914, 1129, 2033
PspGI CCWGG 4 cut(s) 543, 1658, 1830, 2382
PspN4I GGNNCC 4 cut(s) 136, 1486, 2078, 2100
PspPI GGNCC 4 cut(s) 229, 1349, 1999, 2591
PstI CTGCAG 1 cut(s) 2377
PsuI RGATCY 5 cut(s) 1356, 1434, 2098, 2393, 2598
RsaI GTAC 3 cut(s) 541, 1783, 2624
RsaNI GTAC 3 cut(s) 540, 1782, 2623
RseI CAYNNNNRTG 2 cut(s) 943, 2185
SapI GCTCTTC 3 cut(s) 56, 1416, 2658
SaqAI TTAA 4 cut(s) 1716, 1929, 1986, 2219
SatI GCNGC 9 cut(s) 225, 462, 1071, 1101, 1625, 1681, 1704, 2313, 2737
Sau96I GGNCC 4 cut(s) 229, 1349, 1999, 2591
SchI GAGTC 5 cut(s) 506, 647, 1847, 1889, 2567
ScrFI CCNGG 4 cut(s) 545, 1660, 1832, 2384
SduI GDGCHC 2 cut(s) 273, 759
SfaNI GCATC 4 cut(s) 1057, 1252, 2299, 2494
SfcI CTRYAG 2 cut(s) 2373, 2704
SinI GGWCC 3 cut(s) 229, 1349, 1999
SmiMI CAYNNNNRTG 2 cut(s) 943, 2185
SmlI CTYRAG 1 cut(s) 2534
SmoI CTYRAG 1 cut(s) 2534
SsiI CCGC 6 cut(s) 224, 227, 1100, 1426, 1472, 2668
SspI AATATT 1 cut(s) 1797
SspMI CTAG 6 cut(s) 56, 614, 788, 792, 2030, 2606
StyD4I CCNGG 4 cut(s) 543, 1658, 1830, 2382
StyI CCWWGG 4 cut(s) 1230, 1785, 2472, 2759
TaaI ACNGT 3 cut(s) 139, 828, 1489
TaiI ACGT 2 cut(s) 251, 2700
TaqI TCGA 7 cut(s) 267, 405, 413, 1655, 2072, 2319, 2449
TauI GCSGC 2 cut(s) 227, 1103
TfiI GAWTC 6 cut(s) 548, 856, 1316, 1663, 1739, 1790
Tru1I TTAA 4 cut(s) 1716, 1929, 1986, 2219
Tru9I TTAA 4 cut(s) 1716, 1929, 1986, 2219
TscAI CASTG 3 cut(s) 337, 508, 934
TseFI GTSAC 2 cut(s) 887, 2559
TseI GCWGC 7 cut(s) 461, 1070, 1624, 1680, 1703, 2312, 2736
Tsp45I GTSAC 2 cut(s) 887, 2559
TspGWI ACGGA 1 cut(s) 1675
TspRI CASTG 3 cut(s) 337, 508, 934
VneI GTGCAC 1 cut(s) 755
VpaK11BI GGWCC 3 cut(s) 229, 1349, 1999
XagI CCTNNNNNAGG 2 cut(s) 129, 1479
XapI RAATTY 8 cut(s) 1046, 1302, 1328, 1649, 1934, 2143, 2544, 2570
XceI RCATGY 3 cut(s) 277, 961, 2203
XmnI GAANNNNTTC 1 cut(s) 481
XspI CTAG 6 cut(s) 56, 614, 788, 792, 2030, 2606
Zsp2I ATGCAT 1 cut(s) 2331
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.