Rroxscaffold_4G00304120

cytochrome P450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000330
Physical Location & Seq
Reverse (-)
24791965 .. 24794525
2561 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00304120.1

Sequence Viewer

Length: 1719 bp
ATGGGTTTCCTCTATTTCATCTTCACATTCACATTTCTGTTACTCCTTCTGTTCCTCACCTTCGTGTCTTTTCTCATATTCAAAATCTTCACCGGCAAATCCCTCAGAGACCCAAACTACCCACCTATAAAGGGCACTGTCTTCCACCAGCTCCTCTACTTCACCACACTCTATGACCACCAAACCAAAGTAGCCCGAGACACCCCAACTTACCGGCTCGTCGCGCCGGAGCACAGCGAAGTCTACACCGCCGACCCCCGAAACGTCGAGCATGTTCTCAAAACCAACTTTGCCAATTACACAAGAGGTGATTACCATGTGGGTATTATGTCTGATATCTTTGGCCAGGGAATATTTGTTGCTGATGGACAGAAATGGAAGCAGCAGAGGAAGCTTGCCAGTTTCGAGTTTTCGACGAGAGTTCTAAAGGATTTCAGCTGTTCTGTTTTCAGAAGAAATGGTGCTAAATTGGTCAAAGTTATTTCTGAGTACTCTGTTGCAAATGGAGTTTTTGATATGCAGACTGGCTCTATGCCTCTATGTACTGGTCGACTAGCTCAGCTTGATCTCCTAGTGCATGACCTTACTGCTGTATGGTCAGGCCTAACTGATTTGCTTATGAGATGTACTTTGGATTCAATATTCAAAGTTGGGTTTGGAATAGAACTGAATTGCTTGGAGGGTTCAAGCAAAGAAGCGATAGAATTTATGAAGGCATTTGATGAGTCAACTGCTTTGACCTATTGGCGATATGTTGATCCATTCTGGCAATTGAAAAGGTTTCTCAATATTGGTTGTGAGGCCACCCTTAAAAAGTATGTCAAAGTCATTCATGATTTTGTGCACCAACATATCAGGAGAAAGAGGGAATTGCTAGCTGTGAAGAAAGATGGTTTTCAATTTATGAATTTTGATTCAATGCGTCAACTTAAGATTGCCTGGTGGCTGCTGGTATCTTTGGTTAAATGTTTTGAATTCTGTTATGTTATGAAGAATGACAAGGAGGACATACTCTCGAGGTTTCTATTGGAGAGTGAGAATAATCCAGAGGAGATGAATGATAAATATTTAAGCGACATAATTCTGAATTTTATGATTGCTGGGAAAGATACCAGTGCAAACACACTGTCATGGTTCTTCTACATGCTCTGTAAGTACCCTCTCATACAAGAAAAAGTTGCACAAGAAGTGAGGGATGTAATTGGTAATCAGGAAGTAGACATTGAGGCATTTGTGGAGGAAATAACTGATGCATCTCTTGAACAACTTCATTATCTTCATGCCACACTAACAGAGACCTTGAGGCTGTACCCTGCAGTTCCTGTGGATGGGAGATGTGCAGAGAAGGATGACATTCTTCCTGATGGCTTTAGACTGAAAAAAGGAGACGGAATAAACTACATGGCCTATTCCATGGGGAGAATGCCTTATATTTGGGGACAAGATGCTGAGGATTTCAGACCTGAAAGATGGCTCAACAATGGAGTTTTCCAGCCTGAATCGACTTTCAAATTTGTCACATTTCATGCAGGCCCTCGGATCTGTCTAGGAAAGGACTTTGCTTACAGACAGATGAAGATAGTAACAACGGCTCTTCTTTACTTCTTCCGGTTCAAATTGGCTGATGAAACAACAATTGTAACCTACAGAACCATGTTCACTCTTCACATCCATGGTTCTCTCCCTATGCTTGCAGTTCCAAGGACCAAGCACAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

572

Amino Acids

66.54

Weight (kDa)

7.58

Isoelectric Point (pI)

31.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 54 - 174 7.1e-07 Cytochrome P450
p450 PF00067 202 - 548 8.1e-63 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000330)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G44890 AT2G44890 AT2G45510
fragaria_vesca FvH4_7g12200 FvH4_7g12250 FvH4_7g12281 FvH4_7g12281 FvH4_7g12281 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12300 FvH4_7g12310
malus_domestica MD02G1200000.v1.1 MD02G1200100.v1.1 MD02G1200300.v1.1 MD02G1200400.v1.1 MD02G1200500.v1.1 MD02G1200600.v1.1 MD02G1200700.v1.1
prunus_persica Prupe.2G148400_v2.0.a1 Prupe.2G148500_v2.0.a1 Prupe.2G148600_v2.0.a1 Prupe.2G148700_v2.0.a1
pyrus_communis pycom02g16390
rosa_chinensis RchiOBHm_Chr1g0350941 RchiOBHm_Chr1g0350951 RchiOBHm_Chr1g0350981 RchiOBHm_Chr1g0350991 RchiOBHm_Chr1g0351001 RchiOBHm_Chr1g0351031 RchiOBHm_Chr1g0351061 RchiOBHm_Chr1g0351071 RchiOBHm_Chr1g0351081 RchiOBHm_Chr1g0351091 RchiOBHm_Chr1g0351101 RchiOBHm_Chr1g0375431 RchiOBHm_Chr2g0142281
rosa_laevigata RLG00000026651 RLG00000028432 RLG00000028433 RLG00000028435 RLG00000028436 RLG00000028437 RLG00000028438 RLG00000028439
rosa_multiflora Rmu_co7992102.1_g000001 Rmu_sc0000429.1_g000085 Rmu_sc0002665.1_g000014 Rmu_sc0002665.1_g000018 Rmu_sc0006087.1_g000001 Rmu_sc0006458.1_g000011 Rmu_sc0008688.1_g000002 Rmu_sc0008688.1_g000006 Rmu_sc0009646.1_g000012 Rmu_sc0032693.1_g000003
rosa_roxburghii Rroxscaffold_4G00304080 Rroxscaffold_4G00304120 Rroxscaffold_4G00304150 Rroxscaffold_4G00304170 Rroxscaffold_4G00304180 Rroxscaffold_4G00304190 Rroxscaffold_4G00304210 Rroxscaffold_4G00304230 Rroxscaffold_4G00304280
rosa_rugosa Rorug01G0075700 Rorug01G0215400 Rorug01G0216000 Rorug01G0216100 Rorug01G0216200 Rorug01G0216300 Rorug01G0216300 Rorug01G0216300 Rorug02G0238800 Rorug04G0006700 Rorug06G0023400
rosa_samantha Rh1AG230300 Rh1AG230400 Rh1AG230700 Rh1AG230800 Rh1BG200100 Rh1BG200200 Rh1BG200600 Rh1DG227900 Rh1DG228000 Rh1DG228200
rosa_wichuraiana Rw0G010880 Rw1G019960 Rw1G019970 Rw1G019990 Rw1G020000 Rw1G020010 Rw1G020040 Rw1G020050 Rw1G020060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 243, 550, 1218
AccII CGCG 1 cut(s) 224
AciI CCGC 1 cut(s) 249
AclWI GGATC 2 cut(s) 752, 1547
AcoI YGGCCR 1 cut(s) 343
AcsI RAATTY 5 cut(s) 704, 907, 974, 1087, 1511
AfaI GTAC 5 cut(s) 491, 544, 628, 1157, 1310
AfiI CCNNNNNNNGG 2 cut(s) 131, 1328
AflII CTTAAG 1 cut(s) 929
AjnI CCWGG 2 cut(s) 345, 938
AleI CACNNNNGTG 1 cut(s) 62
AluBI AGCT 6 cut(s) 151, 394, 438, 557, 562, 878
AluI AGCT 6 cut(s) 151, 394, 438, 557, 562, 878
Alw21I GWGCWC 2 cut(s) 234, 846
Alw26I GTCTC 4 cut(s) 102, 192, 1289, 1380
Alw44I GTGCAC 1 cut(s) 842
AlwI GGATC 2 cut(s) 752, 1547
AlwNI CAGNNNCTG 1 cut(s) 1322
Ama87I CYCGRG 2 cut(s) 195, 1015
AoxI GGCC 5 cut(s) 343, 601, 801, 1404, 1531
ApaLI GTGCAC 1 cut(s) 842
ApeKI GCWGC 2 cut(s) 382, 946
ApoI RAATTY 5 cut(s) 704, 907, 974, 1087, 1511
ArsI GACNNNNNNTTYG 2 cut(s) 1112, 1144
Asp700I GAANNNNTTC 1 cut(s) 1266
AspLEI GCGC 1 cut(s) 226
AspS9I GGNCC 2 cut(s) 1532, 1704
AsuHPI GGTGA 4 cut(s) 49, 82, 154, 320
AsuNHI GCTAGC 1 cut(s) 874
AvaI CYCGRG 2 cut(s) 195, 1015
AvaII GGWCC 1 cut(s) 1704
BaeGI GKGCMC 2 cut(s) 137, 846
BalI TGGCCA 1 cut(s) 345
BbsI GAAGAC 1 cut(s) 133
Bbv12I GWGCWC 2 cut(s) 234, 846
BbvCI CCTCAGC 1 cut(s) 1449
BbvI GCAGC 2 cut(s) 394, 933
BccI CCATC 5 cut(s) 359, 884, 1322, 1358, 1464
BceAI ACGGC 1 cut(s) 1605
BciT130I CCWGG 2 cut(s) 347, 940
BcoDI GTCTC 4 cut(s) 102, 192, 1289, 1380
BfaI CTAG 4 cut(s) 554, 572, 875, 1547
BfmI CTRYAG 2 cut(s) 1314, 1645
BfrI CTTAAG 1 cut(s) 929
BisI GCNGC 2 cut(s) 383, 947
BlpI GCTNAGC 1 cut(s) 558
BlsI GCNGC 2 cut(s) 384, 948
BmcAI AGTACT 1 cut(s) 491
Bme1390I CCNGG 2 cut(s) 347, 940
Bme18I GGWCC 1 cut(s) 1704
BmeT110I CYCGRG 2 cut(s) 195, 1015
BmgT120I GGNCC 2 cut(s) 1532, 1704
BmrFI CCNGG 2 cut(s) 347, 940
BmsI GCATC 3 cut(s) 1240, 1262, 1435
BmtI GCTAGC 1 cut(s) 878
BpiI GAAGAC 1 cut(s) 133
Bpu10I CCTNAGC 1 cut(s) 1449
Bpu1102I GCTNAGC 1 cut(s) 558
BpuEI CTTGAG 1 cut(s) 1321
BsaI GGTCTC 2 cut(s) 102, 1289
BsaJI CCNNGG 5 cut(s) 346, 1413, 1535, 1672, 1700
BsaWI WCCGGW 1 cut(s) 1608
Bsc4I CCNNNNNNNGG 2 cut(s) 131, 1328
Bse118I RCCGGY 2 cut(s) 92, 213
Bse1I ACTGG 4 cut(s) 399, 529, 550, 1113
BseBI CCWGG 2 cut(s) 347, 940
BseDI CCNNGG 5 cut(s) 346, 1413, 1535, 1672, 1700
BseGI GGATG 4 cut(s) 1201, 1333, 1354, 1668
BseLI CCNNNNNNNGG 2 cut(s) 131, 1328
BseMII CTCAG 4 cut(s) 118, 477, 572, 1440
BseNI ACTGG 4 cut(s) 399, 529, 550, 1113
BseRI GAGGAG 2 cut(s) 143, 1064
BseSI GKGCMC 2 cut(s) 137, 846
BseXI GCAGC 2 cut(s) 394, 933
BseYI CCCAGC 1 cut(s) 1100
BsgI GTGCAG 1 cut(s) 1359
Bsh1236I CGCG 1 cut(s) 224
BshFI GGCC 5 cut(s) 345, 603, 803, 1406, 1533
BsiHKAI GWGCWC 2 cut(s) 234, 846
BsiHKCI CYCGRG 2 cut(s) 195, 1015
BsiSI CCGG 4 cut(s) 93, 214, 227, 1609
BslFI GGGAC 1 cut(s) 1452
BslI CCNNNNNNNGG 2 cut(s) 131, 1328
BsmAI GTCTC 4 cut(s) 102, 192, 1289, 1380
BsmBI CGTCTC 1 cut(s) 1380
BsmFI GGGAC 1 cut(s) 1452
BsmI GAATGC 1 cut(s) 1428
BsnI GGCC 5 cut(s) 345, 603, 803, 1406, 1533
Bso31I GGTCTC 2 cut(s) 102, 1289
BsoBI CYCGRG 2 cut(s) 195, 1015
Bsp1286I GDGCHC 3 cut(s) 137, 234, 846
Bsp143I GATC 3 cut(s) 565, 757, 1539
Bsp1720I GCTNAGC 1 cut(s) 558
Bsp19I CCATGG 2 cut(s) 1413, 1672
BspACI CCGC 1 cut(s) 249
BspANI GGCC 5 cut(s) 345, 603, 803, 1406, 1533
BspCNI CTCAG 4 cut(s) 117, 478, 571, 1441
BspFNI CGCG 1 cut(s) 224
BspHI TCATGA 1 cut(s) 832
BspMAI CTGCAG 1 cut(s) 1318
BspOI GCTAGC 1 cut(s) 878
BspPI GGATC 2 cut(s) 752, 1547
BspQI GCTCTTC 1 cut(s) 1599
BspTI CTTAAG 1 cut(s) 929
BspTNI GGTCTC 2 cut(s) 102, 1289
BsrFI RCCGGY 2 cut(s) 92, 213
BsrI ACTGG 4 cut(s) 399, 529, 550, 1113
BssAI RCCGGY 2 cut(s) 92, 213
BssECI CCNNGG 5 cut(s) 346, 1413, 1535, 1672, 1700
BssMI GATC 3 cut(s) 565, 757, 1539
BssT1I CCWWGG 3 cut(s) 1413, 1672, 1700
Bst2UI CCWGG 2 cut(s) 347, 940
Bst4CI ACNGT 2 cut(s) 139, 1128
Bst6I CTCTTC 2 cut(s) 1599, 1668
BstAFI CTTAAG 1 cut(s) 929
BstC8I GCNNGC 4 cut(s) 396, 876, 1531, 1692
BstDEI CTNAG 4 cut(s) 104, 486, 558, 1449
BstDSI CCRYGG 2 cut(s) 1413, 1672
BstF5I GGATG 4 cut(s) 1201, 1333, 1354, 1668
BstFNI CGCG 1 cut(s) 224
BstHHI GCGC 1 cut(s) 226
BstKTI GATC 3 cut(s) 568, 760, 1542
BstMAI GTCTC 4 cut(s) 102, 192, 1289, 1380
BstMBI GATC 3 cut(s) 565, 757, 1539
BstMWI GCNNNNNNNGC 2 cut(s) 223, 391
BstNI CCWGG 2 cut(s) 347, 940
BstNSI RCATGY 2 cut(s) 275, 1147
BstSCI CCNGG 2 cut(s) 345, 938
BstSFI CTRYAG 2 cut(s) 1314, 1645
BstSLI GKGCMC 2 cut(s) 137, 846
BstUI CGCG 1 cut(s) 224
BstV1I GCAGC 2 cut(s) 394, 933
BstV2I GAAGAC 1 cut(s) 133
BstX2I RGATCY 1 cut(s) 1539
BstYI RGATCY 1 cut(s) 1539
BsuRI GGCC 5 cut(s) 345, 603, 803, 1406, 1533
BtgI CCRYGG 2 cut(s) 1413, 1672
BtsCI GGATG 4 cut(s) 1201, 1333, 1354, 1668
BtsIMutI CAGTG 3 cut(s) 135, 1120, 1124
Cac8I GCNNGC 4 cut(s) 396, 876, 1531, 1692
CaiI CAGNNNCTG 1 cut(s) 1322
CciI TCATGA 1 cut(s) 832
CfoI GCGC 1 cut(s) 226
Cfr10I RCCGGY 2 cut(s) 92, 213
Cfr13I GGNCC 2 cut(s) 1532, 1704
CseI GACGC 1 cut(s) 911
Csp6I GTAC 5 cut(s) 490, 543, 627, 1156, 1309
CviQI GTAC 5 cut(s) 490, 543, 627, 1156, 1309
DdeI CTNAG 4 cut(s) 104, 486, 558, 1449
DpnI GATC 3 cut(s) 567, 759, 1541
DpnII GATC 3 cut(s) 565, 757, 1539
EaeI YGGCCR 1 cut(s) 343
Eam1104I CTCTTC 2 cut(s) 1599, 1668
EarI CTCTTC 2 cut(s) 1599, 1668
Eco130I CCWWGG 3 cut(s) 1413, 1672, 1700
Eco147I AGGCCT 1 cut(s) 603
Eco31I GGTCTC 2 cut(s) 102, 1289
Eco32I GATATC 1 cut(s) 337
Eco47I GGWCC 1 cut(s) 1704
Eco88I CYCGRG 2 cut(s) 195, 1015
EcoO109I RGGNCCY 1 cut(s) 1532
EcoRI GAATTC 1 cut(s) 974
EcoRII CCWGG 2 cut(s) 345, 938
EcoRV GATATC 1 cut(s) 337
EcoT14I CCWWGG 3 cut(s) 1413, 1672, 1700
EcoT22I ATGCAT 1 cut(s) 1255
ErhI CCWWGG 3 cut(s) 1413, 1672, 1700
Esp3I CGTCTC 1 cut(s) 1380
FaqI GGGAC 1 cut(s) 1452
FblI GTMKAC 3 cut(s) 243, 550, 1218
Fnu4HI GCNGC 2 cut(s) 383, 947
FokI GGATG 4 cut(s) 1208, 1340, 1361, 1655
Fsp4HI GCNGC 2 cut(s) 383, 947
FspBI CTAG 4 cut(s) 554, 572, 875, 1547
GlaI GCGC 1 cut(s) 225
GluI GCNGC 2 cut(s) 383, 947
GsaI CCCAGC 1 cut(s) 1104
HaeIII GGCC 5 cut(s) 345, 603, 803, 1406, 1533
HapII CCGG 4 cut(s) 93, 214, 227, 1609
HgaI GACGC 1 cut(s) 911
HhaI GCGC 1 cut(s) 226
Hin6I GCGC 1 cut(s) 224
HinP1I GCGC 1 cut(s) 224
HincII GTYRAC 3 cut(s) 551, 729, 926
HindII GTYRAC 3 cut(s) 551, 729, 926
HindIII AAGCTT 1 cut(s) 392
HinfI GANTC 4 cut(s) 635, 725, 914, 1499
HpaII CCGG 4 cut(s) 93, 214, 227, 1609
HphI GGTGA 4 cut(s) 49, 82, 154, 320
Hpy166II GTNNAC 7 cut(s) 244, 551, 729, 844, 926, 1219, 1659
Hpy188I TCNGA 7 cut(s) 107, 334, 452, 487, 1086, 1460, 1539
Hpy188III TCNNGA 7 cut(s) 833, 856, 1015, 1046, 1211, 1259, 1361
Hpy8I GTNNAC 7 cut(s) 244, 551, 729, 844, 926, 1219, 1659
Hpy99I CGWCG 3 cut(s) 224, 269, 418
HpyAV CCTTC 4 cut(s) 56, 70, 706, 1339
HpyCH4III ACNGT 2 cut(s) 139, 1128
HpyCH4IV ACGT 1 cut(s) 264
HpyF10VI GCNNNNNNNGC 2 cut(s) 223, 391
HpyF3I CTNAG 4 cut(s) 104, 486, 558, 1449
HpySE526I ACGT 1 cut(s) 264
HspAI GCGC 1 cut(s) 224
Kzo9I GATC 3 cut(s) 565, 757, 1539
LguI GCTCTTC 1 cut(s) 1599
LmnI GCTCC 2 cut(s) 156, 229
Lsp1109I GCAGC 2 cut(s) 394, 933
LweI GCATC 3 cut(s) 1240, 1262, 1435
MaeI CTAG 4 cut(s) 554, 572, 875, 1547
MaeII ACGT 1 cut(s) 264
MaeIII GTNAC 4 cut(s) 39, 1516, 1582, 1639
MalI GATC 3 cut(s) 567, 759, 1541
MboI GATC 3 cut(s) 565, 757, 1539
MfeI CAATTG 2 cut(s) 770, 1635
MflI RGATCY 1 cut(s) 1539
MhlI GDGCHC 3 cut(s) 137, 234, 846
MlsI TGGCCA 1 cut(s) 345
MluNI TGGCCA 1 cut(s) 345
MlyI GAGTC 1 cut(s) 734
Mox20I TGGCCA 1 cut(s) 345
Mph1103I ATGCAT 1 cut(s) 1255
MroXI GAANNNNTTC 1 cut(s) 1266
MscI TGGCCA 1 cut(s) 345
MseI TTAA 4 cut(s) 810, 930, 963, 1070
MslI CAYNNNNRTG 3 cut(s) 62, 1129, 1671
Msp20I TGGCCA 1 cut(s) 345
MspA1I CMGCKG 1 cut(s) 438
MspCI CTTAAG 1 cut(s) 929
MspI CCGG 4 cut(s) 93, 214, 227, 1609
MspR9I CCNGG 2 cut(s) 347, 940
MunI CAATTG 2 cut(s) 770, 1635
Mva1269I GAATGC 1 cut(s) 1428
MvaI CCWGG 2 cut(s) 347, 940
MvnI CGCG 1 cut(s) 224
MwoI GCNNNNNNNGC 2 cut(s) 223, 391
NcoI CCATGG 2 cut(s) 1413, 1672
NdeII GATC 3 cut(s) 565, 757, 1539
NheI GCTAGC 1 cut(s) 874
NmuCI GTSAC 1 cut(s) 1516
NsiI ATGCAT 1 cut(s) 1255
NspI RCATGY 2 cut(s) 275, 1147
OliI CACNNNNGTG 1 cut(s) 62
PaeR7I CTCGAG 1 cut(s) 1015
PagI TCATGA 1 cut(s) 832
PceI AGGCCT 1 cut(s) 603
PciSI GCTCTTC 1 cut(s) 1599
PctI GAATGC 1 cut(s) 1428
PdmI GAANNNNTTC 1 cut(s) 1266
PfeI GAWTC 3 cut(s) 635, 914, 1499
PkrI GCNGC 2 cut(s) 384, 948
PleI GAGTC 1 cut(s) 733
PpsI GAGTC 1 cut(s) 733
Psp6I CCWGG 2 cut(s) 345, 938
PspFI CCCAGC 1 cut(s) 1100
PspGI CCWGG 2 cut(s) 345, 938
PspPI GGNCC 2 cut(s) 1532, 1704
PstI CTGCAG 1 cut(s) 1318
PstNI CAGNNNCTG 1 cut(s) 1322
PsuI RGATCY 1 cut(s) 1539
PvuII CAGCTG 1 cut(s) 438
RsaI GTAC 5 cut(s) 491, 544, 628, 1157, 1310
RsaNI GTAC 5 cut(s) 490, 543, 627, 1156, 1309
RseI CAYNNNNRTG 3 cut(s) 62, 1129, 1671
SalI GTCGAC 1 cut(s) 549
SapI GCTCTTC 1 cut(s) 1599
SaqAI TTAA 4 cut(s) 810, 930, 963, 1070
SatI GCNGC 2 cut(s) 383, 947
Sau3AI GATC 3 cut(s) 565, 757, 1539
Sau96I GGNCC 2 cut(s) 1532, 1704
ScaI AGTACT 1 cut(s) 491
SchI GAGTC 1 cut(s) 734
ScrFI CCNGG 2 cut(s) 347, 940
SduI GDGCHC 3 cut(s) 137, 234, 846
SfaNI GCATC 3 cut(s) 1240, 1262, 1435
SfcI CTRYAG 2 cut(s) 1314, 1645
Sfr274I CTCGAG 1 cut(s) 1015
SinI GGWCC 1 cut(s) 1704
SlaI CTCGAG 1 cut(s) 1015
SmiMI CAYNNNNRTG 3 cut(s) 62, 1129, 1671
SmlI CTYRAG 3 cut(s) 929, 1015, 1300
SmoI CTYRAG 3 cut(s) 929, 1015, 1300
SseBI AGGCCT 1 cut(s) 603
SsiI CCGC 1 cut(s) 249
SspI AATATT 4 cut(s) 354, 642, 790, 1067
SspMI CTAG 4 cut(s) 554, 572, 875, 1547
StuI AGGCCT 1 cut(s) 603
StyD4I CCNGG 2 cut(s) 345, 938
StyI CCWWGG 3 cut(s) 1413, 1672, 1700
TaaI ACNGT 2 cut(s) 139, 1128
TaiI ACGT 1 cut(s) 267
TaqI TCGA 6 cut(s) 267, 405, 413, 550, 1016, 1502
TatI WGTACW 3 cut(s) 489, 542, 626
TfiI GAWTC 3 cut(s) 635, 914, 1499
Tru1I TTAA 4 cut(s) 810, 930, 963, 1070
Tru9I TTAA 4 cut(s) 810, 930, 963, 1070
TscAI CASTG 3 cut(s) 142, 1120, 1131
TseFI GTSAC 1 cut(s) 1516
TseI GCWGC 2 cut(s) 382, 946
Tsp45I GTSAC 1 cut(s) 1516
TspGWI ACGGA 1 cut(s) 1404
TspRI CASTG 3 cut(s) 142, 1120, 1131
Vha464I CTTAAG 1 cut(s) 929
VneI GTGCAC 1 cut(s) 842
VpaK11BI GGWCC 1 cut(s) 1704
XapI RAATTY 5 cut(s) 704, 907, 974, 1087, 1511
XceI RCATGY 2 cut(s) 275, 1147
XhoI CTCGAG 1 cut(s) 1015
XmiI GTMKAC 3 cut(s) 243, 550, 1218
XmnI GAANNNNTTC 1 cut(s) 1266
XspI CTAG 4 cut(s) 554, 572, 875, 1547
ZrmI AGTACT 1 cut(s) 491
Zsp2I ATGCAT 1 cut(s) 1255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.