Rmu_sc0002665.1_g000018

cytochrome P450

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002665.1
Physical Location & Seq
Forward (+)
68912 .. 69294
383 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002665.1_g000018.1.cds

Sequence Viewer

Length: 315 bp
atggcctatgccatggggagaatgccttacatttggggagaagatgctgaggatttccaacctgaaagatggctcgataatggagttttcaagcccgaatcacctttcaaattcgtcgcatttcatgttagacctcggacctgtctagggaaggactttgcttacaggcagattaagatagtagcaatggctcttctttgctttttccgcttcaaattggctgatgaaacaagaaatgtaacctataggaccatgttcacccttcacatagatggcaccctccctatgcttgcacttccaaggaccacctcatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

104

Amino Acids

12.2

Weight (kDa)

9.06

Isoelectric Point (pI)

35.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000330)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G44890 AT2G44890 AT2G45510
fragaria_vesca FvH4_7g12200 FvH4_7g12250 FvH4_7g12281 FvH4_7g12281 FvH4_7g12281 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12282 FvH4_7g12300 FvH4_7g12310
malus_domestica MD02G1200000.v1.1 MD02G1200100.v1.1 MD02G1200300.v1.1 MD02G1200400.v1.1 MD02G1200500.v1.1 MD02G1200600.v1.1 MD02G1200700.v1.1
prunus_persica Prupe.2G148400_v2.0.a1 Prupe.2G148500_v2.0.a1 Prupe.2G148600_v2.0.a1 Prupe.2G148700_v2.0.a1
pyrus_communis pycom02g16390
rosa_chinensis RchiOBHm_Chr1g0350941 RchiOBHm_Chr1g0350951 RchiOBHm_Chr1g0350981 RchiOBHm_Chr1g0350991 RchiOBHm_Chr1g0351001 RchiOBHm_Chr1g0351031 RchiOBHm_Chr1g0351061 RchiOBHm_Chr1g0351071 RchiOBHm_Chr1g0351081 RchiOBHm_Chr1g0351091 RchiOBHm_Chr1g0351101 RchiOBHm_Chr1g0375431 RchiOBHm_Chr2g0142281
rosa_laevigata RLG00000026651 RLG00000028432 RLG00000028433 RLG00000028435 RLG00000028436 RLG00000028437 RLG00000028438 RLG00000028439
rosa_multiflora Rmu_co7992102.1_g000001 Rmu_sc0000429.1_g000085 Rmu_sc0002665.1_g000014 Rmu_sc0002665.1_g000018 Rmu_sc0006087.1_g000001 Rmu_sc0006458.1_g000011 Rmu_sc0008688.1_g000002 Rmu_sc0008688.1_g000006 Rmu_sc0009646.1_g000012 Rmu_sc0032693.1_g000003
rosa_roxburghii Rroxscaffold_4G00304080 Rroxscaffold_4G00304120 Rroxscaffold_4G00304150 Rroxscaffold_4G00304170 Rroxscaffold_4G00304180 Rroxscaffold_4G00304190 Rroxscaffold_4G00304210 Rroxscaffold_4G00304230 Rroxscaffold_4G00304280
rosa_rugosa Rorug01G0075700 Rorug01G0215400 Rorug01G0216000 Rorug01G0216100 Rorug01G0216200 Rorug01G0216300 Rorug01G0216300 Rorug01G0216300 Rorug02G0238800 Rorug04G0006700 Rorug06G0023400
rosa_samantha Rh1AG230300 Rh1AG230400 Rh1AG230700 Rh1AG230800 Rh1BG200100 Rh1BG200200 Rh1BG200600 Rh1DG227900 Rh1DG228000 Rh1DG228200
rosa_wichuraiana Rw0G010880 Rw1G019960 Rw1G019970 Rw1G019990 Rw1G020000 Rw1G020010 Rw1G020040 Rw1G020050 Rw1G020060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 275
AciI CCGC 1 cut(s) 208
AcsI RAATTY 1 cut(s) 110
AfiI CCNNNNNNNGG 1 cut(s) 147
AgsI TTSAA 3 cut(s) 91, 109, 214
AoxI GGCC 1 cut(s) 3
ApoI RAATTY 1 cut(s) 110
AspS9I GGNCC 3 cut(s) 138, 249, 303
AsuHPI GGTGA 2 cut(s) 93, 250
AvaII GGWCC 3 cut(s) 138, 249, 303
BanI GGYRCC 1 cut(s) 275
BbvCI CCTCAGC 1 cut(s) 48
BccI CCATC 2 cut(s) 63, 266
BfaI CTAG 1 cut(s) 146
BfmI CTRYAG 1 cut(s) 244
Bme18I GGWCC 3 cut(s) 138, 249, 303
BmgT120I GGNCC 3 cut(s) 138, 249, 303
BmiI GGNNCC 1 cut(s) 277
BmsI GCATC 1 cut(s) 34
Bpu10I CCTNAGC 1 cut(s) 48
BsaJI CCNNGG 3 cut(s) 12, 134, 299
Bsc4I CCNNNNNNNGG 1 cut(s) 147
Bse3DI GCAATG 1 cut(s) 192
BseDI CCNNGG 3 cut(s) 12, 134, 299
BseLI CCNNNNNNNGG 1 cut(s) 147
BseMI GCAATG 1 cut(s) 192
BseMII CTCAG 1 cut(s) 39
BshFI GGCC 1 cut(s) 5
BshNI GGYRCC 1 cut(s) 275
BslI CCNNNNNNNGG 1 cut(s) 147
BsmI GAATGC 1 cut(s) 27
BsnI GGCC 1 cut(s) 5
Bsp19I CCATGG 1 cut(s) 12
BspACI CCGC 1 cut(s) 208
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 1 cut(s) 40
BspLI GGNNCC 1 cut(s) 277
BspQI GCTCTTC 1 cut(s) 198
BspT107I GGYRCC 1 cut(s) 275
BsrDI GCAATG 1 cut(s) 192
BssECI CCNNGG 3 cut(s) 12, 134, 299
BssT1I CCWWGG 2 cut(s) 12, 299
Bst6I CTCTTC 1 cut(s) 198
BstC8I GCNNGC 1 cut(s) 291
BstDEI CTNAG 1 cut(s) 48
BstDSI CCRYGG 1 cut(s) 12
BstMWI GCNNNNNNNGC 1 cut(s) 207
BstSFI CTRYAG 1 cut(s) 244
BsuRI GGCC 1 cut(s) 5
BtgI CCRYGG 1 cut(s) 12
Cac8I GCNNGC 1 cut(s) 291
Cfr13I GGNCC 3 cut(s) 138, 249, 303
CviAII CATG 3 cut(s) 13, 125, 253
CviJI RGCY 5 cut(s) 5, 73, 94, 191, 221
CviKI_1 RGCY 5 cut(s) 5, 73, 94, 191, 221
DdeI CTNAG 1 cut(s) 48
Eam1104I CTCTTC 1 cut(s) 198
EarI CTCTTC 1 cut(s) 198
Eco130I CCWWGG 2 cut(s) 12, 299
Eco47I GGWCC 3 cut(s) 138, 249, 303
EcoT14I CCWWGG 2 cut(s) 12, 299
ErhI CCWWGG 2 cut(s) 12, 299
FaeI CATG 3 cut(s) 16, 128, 256
FaiI YATR 8 cut(s) 9, 14, 126, 246, 254, 269, 287, 313
FatI CATG 3 cut(s) 12, 124, 252
FspBI CTAG 1 cut(s) 146
HaeIII GGCC 1 cut(s) 5
Hin1II CATG 3 cut(s) 16, 128, 256
HinfI GANTC 1 cut(s) 98
HphI GGTGA 2 cut(s) 93, 250
Hpy166II GTNNAC 1 cut(s) 258
Hpy188I TCNGA 1 cut(s) 138
Hpy8I GTNNAC 1 cut(s) 258
Hpy99I CGWCG 1 cut(s) 119
HpyAV CCTTC 2 cut(s) 145, 272
HpyCH4V TGCA 1 cut(s) 293
HpyF10VI GCNNNNNNNGC 1 cut(s) 207
HpyF3I CTNAG 1 cut(s) 48
Hsp92II CATG 3 cut(s) 16, 128, 256
LguI GCTCTTC 1 cut(s) 198
LpnPI CCDG 3 cut(s) 75, 151, 154
LweI GCATC 1 cut(s) 34
MaeI CTAG 1 cut(s) 146
MaeIII GTNAC 1 cut(s) 238
MboII GAAGA 2 cut(s) 53, 185
MluCI AATT 2 cut(s) 110, 215
MmeI TCCRAC 1 cut(s) 82
MnlI CCTC 3 cut(s) 43, 144, 290
MseI TTAA 1 cut(s) 174
MslI CAYNNNNRTG 1 cut(s) 270
Mva1269I GAATGC 1 cut(s) 27
MwoI GCNNNNNNNGC 1 cut(s) 207
NcoI CCATGG 1 cut(s) 12
NlaIII CATG 3 cut(s) 16, 128, 256
NlaIV GGNNCC 1 cut(s) 277
PciSI GCTCTTC 1 cut(s) 198
PctI GAATGC 1 cut(s) 27
PfeI GAWTC 1 cut(s) 98
PspN4I GGNNCC 1 cut(s) 277
PspPI GGNCC 3 cut(s) 138, 249, 303
RseI CAYNNNNRTG 1 cut(s) 270
SapI GCTCTTC 1 cut(s) 198
SaqAI TTAA 1 cut(s) 174
Sau96I GGNCC 3 cut(s) 138, 249, 303
SetI ASST 6 cut(s) 64, 106, 136, 143, 245, 311
SfaNI GCATC 1 cut(s) 34
SfcI CTRYAG 1 cut(s) 244
SinI GGWCC 3 cut(s) 138, 249, 303
SmiMI CAYNNNNRTG 1 cut(s) 270
Sse9I AATT 2 cut(s) 110, 215
SsiI CCGC 1 cut(s) 208
SspMI CTAG 1 cut(s) 146
StyI CCWWGG 2 cut(s) 12, 299
TaqI TCGA 1 cut(s) 75
TasI AATT 2 cut(s) 110, 215
TfiI GAWTC 1 cut(s) 98
Tru1I TTAA 1 cut(s) 174
Tru9I TTAA 1 cut(s) 174
TspDTI ATGAA 2 cut(s) 113, 240
VpaK11BI GGWCC 3 cut(s) 138, 249, 303
XapI RAATTY 1 cut(s) 110
XspI CTAG 1 cut(s) 146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.