Encoded by
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 1478, 1580 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1170 |
| AccI | GTMKAC | 2 cut(s) | 153, 615 |
| AciI | CCGC | 1 cut(s) | 27 |
| AclI | AACGTT | 1 cut(s) | 1056 |
| AclWI | GGATC | 3 cut(s) | 195, 1603, 1616 |
| AcoI | YGGCCR | 1 cut(s) | 1283 |
| AcsI | RAATTY | 4 cut(s) | 347, 653, 960, 1511 |
| AcuI | CTGAAG | 4 cut(s) | 98, 283, 742, 1001 |
| AcyI | GRCGYC | 1 cut(s) | 1123 |
| AfaI | GTAC | 4 cut(s) | 898, 1136, 1441, 1626 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1170 |
| AgsI | TTSAA | 9 cut(s) | 233, 326, 346, 443, 653, 717, 935, 1039, 1362 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1041, 1073 |
| AluBI | AGCT | 8 cut(s) | 297, 372, 425, 596, 664, 979, 985, 1079 |
| AluI | AGCT | 8 cut(s) | 297, 372, 425, 596, 664, 979, 985, 1079 |
| Alw21I | GWGCWC | 1 cut(s) | 859 |
| Alw26I | GTCTC | 3 cut(s) | 215, 334, 1563 |
| AlwI | GGATC | 3 cut(s) | 195, 1603, 1616 |
| AoxI | GGCC | 1 cut(s) | 1283 |
| ApeKI | GCWGC | 5 cut(s) | 24, 38, 369, 1520, 1523 |
| ApoI | RAATTY | 4 cut(s) | 347, 653, 960, 1511 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 737, 769 |
| AspS9I | GGNCC | 2 cut(s) | 304, 1201 |
| AsuC2I | CCSGG | 2 cut(s) | 1186, 1586 |
| AsuHPI | GGTGA | 2 cut(s) | 1256, 1358 |
| AsuII | TTCGAA | 1 cut(s) | 1325 |
| AvaII | GGWCC | 2 cut(s) | 304, 1201 |
| BaeGI | GKGCMC | 1 cut(s) | 1585 |
| BamHI | GGATCC | 1 cut(s) | 1608 |
| BanI | GGYRCC | 2 cut(s) | 1478, 1580 |
| BbsI | GAAGAC | 1 cut(s) | 269 |
| Bbv12I | GWGCWC | 1 cut(s) | 859 |
| BbvI | GCAGC | 5 cut(s) | 25, 36, 381, 1532, 1535 |
| BccI | CCATC | 5 cut(s) | 172, 594, 769, 933, 1457 |
| BceAI | ACGGC | 2 cut(s) | 382, 1270 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1142, 1176 |
| BciVI | GTATCC | 3 cut(s) | 259, 724, 1192 |
| BclI | TGATCA | 1 cut(s) | 133 |
| BcnI | CCSGG | 2 cut(s) | 1186, 1586 |
| BcoDI | GTCTC | 3 cut(s) | 215, 334, 1563 |
| BfaI | CTAG | 6 cut(s) | 218, 480, 597, 665, 1337, 1613 |
| BfmI | CTRYAG | 1 cut(s) | 911 |
| BfuI | GTATCC | 3 cut(s) | 259, 724, 1192 |
| BisI | GCNGC | 5 cut(s) | 25, 39, 370, 1521, 1524 |
| BlpI | GCTNAGC | 1 cut(s) | 16 |
| BlsI | GCNGC | 5 cut(s) | 26, 40, 371, 1522, 1525 |
| BmcAI | AGTACT | 1 cut(s) | 1441 |
| Bme1390I | CCNGG | 2 cut(s) | 1186, 1586 |
| Bme18I | GGWCC | 2 cut(s) | 304, 1201 |
| BmgT120I | GGNCC | 2 cut(s) | 304, 1201 |
| BmiI | GGNNCC | 4 cut(s) | 305, 1480, 1582, 1610 |
| BmrFI | CCNGG | 2 cut(s) | 1186, 1586 |
| BmsI | GCATC | 3 cut(s) | 196, 552, 1380 |
| BpiI | GAAGAC | 1 cut(s) | 269 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 438, 470 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 16 |
| Bpu14I | TTCGAA | 1 cut(s) | 1325 |
| BpuEI | CTTGAG | 1 cut(s) | 504 |
| BpuMI | CCSGG | 2 cut(s) | 1186, 1586 |
| BsaBI | GATNNNNATC | 1 cut(s) | 138 |
| BsaHI | GRCGYC | 1 cut(s) | 1123 |
| BsaJI | CCNNGG | 3 cut(s) | 433, 1185, 1584 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1041, 1071, 1103, 1133 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1170 |
| Bse3DI | GCAATG | 2 cut(s) | 385, 566 |
| Bse8I | GATNNNNATC | 1 cut(s) | 138 |
| BseDI | CCNNGG | 3 cut(s) | 433, 1185, 1584 |
| BseGI | GGATG | 4 cut(s) | 64, 246, 466, 910 |
| BseJI | GATNNNNATC | 1 cut(s) | 138 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1170 |
| BseMI | GCAATG | 2 cut(s) | 385, 566 |
| BseMII | CTCAG | 3 cut(s) | 322, 514, 1248 |
| BseRI | GAGGAG | 1 cut(s) | 197 |
| BseSI | GKGCMC | 1 cut(s) | 1585 |
| BseXI | GCAGC | 5 cut(s) | 25, 36, 381, 1532, 1535 |
| BsgI | GTGCAG | 1 cut(s) | 470 |
| BshFI | GGCC | 1 cut(s) | 1285 |
| BshNI | GGYRCC | 2 cut(s) | 1478, 1580 |
| BsiHKAI | GWGCWC | 1 cut(s) | 859 |
| BsiSI | CCGG | 2 cut(s) | 1185, 1586 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1170 |
| BsmAI | GTCTC | 3 cut(s) | 215, 334, 1563 |
| BsmBI | CGTCTC | 1 cut(s) | 1563 |
| BsmI | GAATGC | 3 cut(s) | 473, 585, 955 |
| BsnI | GGCC | 1 cut(s) | 1285 |
| Bsp119I | TTCGAA | 1 cut(s) | 1325 |
| Bsp1286I | GDGCHC | 2 cut(s) | 859, 1585 |
| Bsp1407I | TGTACA | 1 cut(s) | 1624 |
| Bsp143I | GATC | 4 cut(s) | 133, 187, 1270, 1608 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 16 |
| BspACI | CCGC | 1 cut(s) | 27 |
| BspANI | GGCC | 1 cut(s) | 1285 |
| BspCNI | CTCAG | 3 cut(s) | 321, 513, 1247 |
| BspLI | GGNNCC | 4 cut(s) | 305, 1480, 1582, 1610 |
| BspPI | GGATC | 3 cut(s) | 195, 1603, 1616 |
| BspT104I | TTCGAA | 1 cut(s) | 1325 |
| BspT107I | GGYRCC | 2 cut(s) | 1478, 1580 |
| BsrDI | GCAATG | 2 cut(s) | 385, 566 |
| BsrGI | TGTACA | 1 cut(s) | 1624 |
| BssECI | CCNNGG | 3 cut(s) | 433, 1185, 1584 |
| BssMI | GATC | 4 cut(s) | 133, 187, 1270, 1608 |
| BssNAI | GTATAC | 1 cut(s) | 616 |
| BssNI | GRCGYC | 1 cut(s) | 1123 |
| BssT1I | CCWWGG | 1 cut(s) | 433 |
| Bst1107I | GTATAC | 1 cut(s) | 616 |
| Bst4CI | ACNGT | 3 cut(s) | 620, 915, 1012 |
| BstACI | GRCGYC | 1 cut(s) | 1123 |
| BstAUI | TGTACA | 1 cut(s) | 1624 |
| BstBI | TTCGAA | 1 cut(s) | 1325 |
| BstC8I | GCNNGC | 3 cut(s) | 22, 407, 485 |
| BstDEI | CTNAG | 7 cut(s) | 16, 293, 308, 410, 500, 1234, 1255 |
| BstF5I | GGATG | 4 cut(s) | 64, 246, 466, 910 |
| BstKTI | GATC | 4 cut(s) | 136, 190, 1273, 1611 |
| BstMAI | GTCTC | 3 cut(s) | 215, 334, 1563 |
| BstMBI | GATC | 4 cut(s) | 133, 187, 1270, 1608 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 21, 30, 1487, 1544 |
| BstNSI | RCATGY | 2 cut(s) | 409, 515 |
| BstSCI | CCNGG | 2 cut(s) | 1184, 1584 |
| BstSFI | CTRYAG | 1 cut(s) | 911 |
| BstSLI | GKGCMC | 1 cut(s) | 1585 |
| BstV1I | GCAGC | 5 cut(s) | 25, 36, 381, 1532, 1535 |
| BstV2I | GAAGAC | 1 cut(s) | 269 |
| BstX2I | RGATCY | 2 cut(s) | 187, 1608 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 96 |
| BstYI | RGATCY | 2 cut(s) | 187, 1608 |
| BstZ17I | GTATAC | 1 cut(s) | 616 |
| BsuI | GTATCC | 3 cut(s) | 259, 724, 1192 |
| BsuRI | GGCC | 1 cut(s) | 1285 |
| BtgZI | GCGATG | 1 cut(s) | 840 |
| BtsCI | GGATG | 4 cut(s) | 64, 246, 466, 910 |
| BtsI | GCAGTG | 3 cut(s) | 33, 285, 1623 |
| BtsIMutI | CAGTG | 5 cut(s) | 33, 285, 859, 1008, 1623 |
| Cac8I | GCNNGC | 3 cut(s) | 22, 407, 485 |
| Cfr13I | GGNCC | 2 cut(s) | 304, 1201 |
| CseI | GACGC | 2 cut(s) | 39, 1112 |
| Csp6I | GTAC | 4 cut(s) | 897, 1135, 1440, 1625 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1363, 1398 |
| CviAII | CATG | 7 cut(s) | 317, 355, 406, 512, 551, 1170, 1268 |
| CviQI | GTAC | 4 cut(s) | 897, 1135, 1440, 1625 |
| DdeI | CTNAG | 7 cut(s) | 16, 293, 308, 410, 500, 1234, 1255 |
| DpnI | GATC | 4 cut(s) | 135, 189, 1272, 1610 |
| DpnII | GATC | 4 cut(s) | 133, 187, 1270, 1608 |
| DraI | TTTAAA | 1 cut(s) | 706 |
| EaeI | YGGCCR | 1 cut(s) | 1283 |
| Eco130I | CCWWGG | 1 cut(s) | 433 |
| Eco32I | GATATC | 1 cut(s) | 1176 |
| Eco47I | GGWCC | 2 cut(s) | 304, 1201 |
| Eco57I | CTGAAG | 4 cut(s) | 98, 283, 742, 1001 |
| EcoO109I | RGGNCCY | 1 cut(s) | 304 |
| EcoRV | GATATC | 1 cut(s) | 1176 |
| EcoT14I | CCWWGG | 1 cut(s) | 433 |
| EcoT22I | ATGCAT | 2 cut(s) | 556, 1171 |
| ErhI | CCWWGG | 1 cut(s) | 433 |
| Esp3I | CGTCTC | 1 cut(s) | 1563 |
| FaeI | CATG | 7 cut(s) | 320, 358, 409, 515, 554, 1173, 1271 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 740, 772 |
| FatI | CATG | 7 cut(s) | 316, 354, 405, 511, 550, 1169, 1267 |
| FauNDI | CATATG | 1 cut(s) | 631 |
| FbaI | TGATCA | 1 cut(s) | 133 |
| FblI | GTMKAC | 2 cut(s) | 153, 615 |
| Fnu4HI | GCNGC | 5 cut(s) | 25, 39, 370, 1521, 1524 |
| FokI | GGATG | 4 cut(s) | 71, 233, 473, 917 |
| Fsp4HI | GCNGC | 5 cut(s) | 25, 39, 370, 1521, 1524 |
| FspBI | CTAG | 6 cut(s) | 218, 480, 597, 665, 1337, 1613 |
| GluI | GCNGC | 5 cut(s) | 25, 39, 370, 1521, 1524 |
| HaeIII | GGCC | 1 cut(s) | 1285 |
| HapII | CCGG | 2 cut(s) | 1185, 1586 |
| HgaI | GACGC | 2 cut(s) | 39, 1112 |
| Hin1I | GRCGYC | 1 cut(s) | 1123 |
| Hin1II | CATG | 7 cut(s) | 320, 358, 409, 515, 554, 1173, 1271 |
| HincII | GTYRAC | 1 cut(s) | 1107 |
| HindII | GTYRAC | 1 cut(s) | 1107 |
| HindIII | AAGCTT | 3 cut(s) | 295, 423, 1077 |
| HinfI | GANTC | 5 cut(s) | 212, 547, 1261, 1403, 1603 |
| HpaI | GTTAAC | 1 cut(s) | 1107 |
| HpaII | CCGG | 2 cut(s) | 1185, 1586 |
| HphI | GGTGA | 2 cut(s) | 1256, 1358 |
| Hpy166II | GTNNAC | 5 cut(s) | 154, 616, 1054, 1107, 1137 |
| Hpy188I | TCNGA | 7 cut(s) | 192, 311, 811, 970, 1237, 1396, 1608 |
| Hpy188III | TCNNGA | 2 cut(s) | 56, 521 |
| Hpy8I | GTNNAC | 5 cut(s) | 154, 616, 1054, 1107, 1137 |
| HpyAV | CCTTC | 5 cut(s) | 437, 721, 766, 1033, 1321 |
| HpyCH4III | ACNGT | 3 cut(s) | 620, 915, 1012 |
| HpyCH4IV | ACGT | 2 cut(s) | 1056, 1378 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 21, 30, 1487, 1544 |
| HpyF3I | CTNAG | 7 cut(s) | 16, 293, 308, 410, 500, 1234, 1255 |
| HpySE526I | ACGT | 2 cut(s) | 1056, 1378 |
| Hsp92I | GRCGYC | 1 cut(s) | 1123 |
| Hsp92II | CATG | 7 cut(s) | 320, 358, 409, 515, 554, 1173, 1271 |
| Ksp22I | TGATCA | 1 cut(s) | 133 |
| KspAI | GTTAAC | 1 cut(s) | 1107 |
| Kzo9I | GATC | 4 cut(s) | 133, 187, 1270, 1608 |
| LmnI | GCTCC | 1 cut(s) | 1042 |
| Lsp1109I | GCAGC | 5 cut(s) | 25, 36, 381, 1532, 1535 |
| LweI | GCATC | 3 cut(s) | 196, 552, 1380 |
| MaeI | CTAG | 6 cut(s) | 218, 480, 597, 665, 1337, 1613 |
| MaeII | ACGT | 2 cut(s) | 1056, 1378 |
| MaeIII | GTNAC | 4 cut(s) | 213, 362, 514, 1124 |
| MalI | GATC | 4 cut(s) | 135, 189, 1272, 1610 |
| MboI | GATC | 4 cut(s) | 133, 187, 1270, 1608 |
| MboII | GAAGA | 6 cut(s) | 104, 269, 1052, 1459, 1462, 1485 |
| MflI | RGATCY | 2 cut(s) | 187, 1608 |
| MhlI | GDGCHC | 2 cut(s) | 859, 1585 |
| MlyI | GAGTC | 2 cut(s) | 221, 556 |
| MmeI | TCCRAC | 1 cut(s) | 274 |
| Mph1103I | ATGCAT | 2 cut(s) | 556, 1171 |
| MseI | TTAA | 6 cut(s) | 63, 375, 705, 1106, 1248, 1307 |
| MslI | CAYNNNNRTG | 2 cut(s) | 57, 1249 |
| MspA1I | CMGCKG | 2 cut(s) | 27, 979 |
| MspI | CCGG | 2 cut(s) | 1185, 1586 |
| MspR9I | CCNGG | 2 cut(s) | 1186, 1586 |
| Mva1269I | GAATGC | 3 cut(s) | 473, 585, 955 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 21, 30, 1487, 1544 |
| NciI | CCSGG | 2 cut(s) | 1186, 1586 |
| NdeI | CATATG | 1 cut(s) | 631 |
| NdeII | GATC | 4 cut(s) | 133, 187, 1270, 1608 |
| NlaIII | CATG | 7 cut(s) | 320, 358, 409, 515, 554, 1173, 1271 |
| NlaIV | GGNNCC | 4 cut(s) | 305, 1480, 1582, 1610 |
| NmuCI | GTSAC | 3 cut(s) | 213, 362, 1124 |
| NsiI | ATGCAT | 2 cut(s) | 556, 1171 |
| NspI | RCATGY | 2 cut(s) | 409, 515 |
| NspV | TTCGAA | 1 cut(s) | 1325 |
| PaeI | GCATGC | 1 cut(s) | 409 |
| PctI | GAATGC | 3 cut(s) | 473, 585, 955 |
| PfeI | GAWTC | 3 cut(s) | 1261, 1403, 1603 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1170 |
| PkrI | GCNGC | 5 cut(s) | 26, 40, 371, 1522, 1525 |
| PleI | GAGTC | 2 cut(s) | 220, 555 |
| PpsI | GAGTC | 2 cut(s) | 220, 555 |
| PpuMI | RGGWCCY | 1 cut(s) | 304 |
| Psp1406I | AACGTT | 1 cut(s) | 1056 |
| Psp5II | RGGWCCY | 1 cut(s) | 304 |
| PspN4I | GGNNCC | 4 cut(s) | 305, 1480, 1582, 1610 |
| PspPI | GGNCC | 2 cut(s) | 304, 1201 |
| PspPPI | RGGWCCY | 1 cut(s) | 304 |
| PsuI | RGATCY | 2 cut(s) | 187, 1608 |
| PvuII | CAGCTG | 1 cut(s) | 979 |
| RsaI | GTAC | 4 cut(s) | 898, 1136, 1441, 1626 |
| RsaNI | GTAC | 4 cut(s) | 897, 1135, 1440, 1625 |
| RseI | CAYNNNNRTG | 2 cut(s) | 57, 1249 |
| SaqAI | TTAA | 6 cut(s) | 63, 375, 705, 1106, 1248, 1307 |
| SatI | GCNGC | 5 cut(s) | 25, 39, 370, 1521, 1524 |
| Sau3AI | GATC | 4 cut(s) | 133, 187, 1270, 1608 |
| Sau96I | GGNCC | 2 cut(s) | 304, 1201 |
| ScaI | AGTACT | 1 cut(s) | 1441 |
| SchI | GAGTC | 2 cut(s) | 221, 556 |
| ScrFI | CCNGG | 2 cut(s) | 1186, 1586 |
| SduI | GDGCHC | 2 cut(s) | 859, 1585 |
| SfaNI | GCATC | 3 cut(s) | 196, 552, 1380 |
| SfcI | CTRYAG | 1 cut(s) | 911 |
| SfuI | TTCGAA | 1 cut(s) | 1325 |
| SinI | GGWCC | 2 cut(s) | 304, 1201 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 57, 1249 |
| SmlI | CTYRAG | 1 cut(s) | 519 |
| SmoI | CTYRAG | 1 cut(s) | 519 |
| SphI | GCATGC | 1 cut(s) | 409 |
| SsiI | CCGC | 1 cut(s) | 27 |
| SspI | AATATT | 1 cut(s) | 1473 |
| SspMI | CTAG | 6 cut(s) | 218, 480, 597, 665, 1337, 1613 |
| StyD4I | CCNGG | 2 cut(s) | 1184, 1584 |
| StyI | CCWWGG | 1 cut(s) | 433 |
| TaaI | ACNGT | 3 cut(s) | 620, 915, 1012 |
| TaiI | ACGT | 2 cut(s) | 1059, 1381 |
| TaqI | TCGA | 2 cut(s) | 1325, 1540 |
| TatI | WGTACW | 3 cut(s) | 1134, 1439, 1624 |
| TfiI | GAWTC | 3 cut(s) | 1261, 1403, 1603 |
| Tru1I | TTAA | 6 cut(s) | 63, 375, 705, 1106, 1248, 1307 |
| Tru9I | TTAA | 6 cut(s) | 63, 375, 705, 1106, 1248, 1307 |
| TscAI | CASTG | 5 cut(s) | 40, 292, 859, 1015, 1623 |
| TseFI | GTSAC | 3 cut(s) | 213, 362, 1124 |
| TseI | GCWGC | 5 cut(s) | 24, 38, 369, 1520, 1523 |
| Tsp45I | GTSAC | 3 cut(s) | 213, 362, 1124 |
| TspDTI | ATGAA | 9 cut(s) | 269, 343, 417, 435, 648, 921, 1032, 1254, 1469 |
| TspGWI | ACGGA | 2 cut(s) | 171, 1124 |
| TspRI | CASTG | 5 cut(s) | 40, 292, 859, 1015, 1623 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1170 |
| VpaK11BI | GGWCC | 2 cut(s) | 304, 1201 |
| XapI | RAATTY | 4 cut(s) | 347, 653, 960, 1511 |
| XceI | RCATGY | 2 cut(s) | 409, 515 |
| XmiI | GTMKAC | 2 cut(s) | 153, 615 |
| XspI | CTAG | 6 cut(s) | 218, 480, 597, 665, 1337, 1613 |
| ZrmI | AGTACT | 1 cut(s) | 1441 |
| Zsp2I | ATGCAT | 2 cut(s) | 556, 1171 |