Rroxscaffold_7G00169950

Glycosyl hydrolases family 28

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000579
Physical Location & Seq
Reverse (-)
10445588 .. 10452476
6889 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00169950.1

Sequence Viewer

Length: 1356 bp
ATGGTCGACGGCTTTTCCAGTGAAGATGTTGCGCGATGGCGGGGTGCGGATCGGTCCAAAGATCCGGATTTGGTATCCGGGTCACTTTGGTGGAAGATTGATCTCTGTTTGGCGTATTTTTTACGTGGAAGATGTTTCAATGGTCACATCACCGGTTACATTGTTAGAAGATTGCCCTTTCGTGCTTTTGACTTAAAGGAGCTATCCTCAGTTAGCTTTTGGTTTTTGGTTATTGCTTCATCATCTATTTTTGGCCTTGGATATGGCCAAAATGGCACTTTTGATGTGCGAGATTTTGGTGAGACTGGGAATGGCCTAGATGATGATTCTCGAGCTTTTCTGGAGGCCTGGCAAAGAGCGTGTGGTGCCGTTGGAGAAACACAAACCCTAAACATCCCAAAGGGGAGAAAATACAAGGTTGATGGAAGCATTGAGGCTCCTTCGACGATTGGTGAGTGGACGGGATGCGAATCGGGAAGCTGGCTAGAGTTCCAAAATGTGAAGGGTCTCACCATCAAGGGAGCAGGAGTTATAGATGGCAAGGGTTCAATTTGGTGGAGTCACAAGCCTCGAATAACTAGCTACACAACTGGGACCAATTGTACGGCAGCACCCACGGCTCTACGATTGCGCTACTGCGACCAACTTGCCTTAAGTGGATTCACTTCTCTCAACAGCCCAAATAAGCATATCCTGATACATGGTTCCAATGGTGTAGATATATCAAGCGTTCATGTCAATGCACCTCAACATAGCCCCAACACTGATGGAATTGTTCTTTCTGGGTCAACTCGAGTAAATATTTTCGAATCTGTCTTTAAAACTGGTGATGACTGCATTGCACTTAAGAGCGGCTGTTCTTTTGTATACATAACTCGTGTAGCATGTGGACCAGGTCATGGTATTAGTGTCGGAAGTTTGGGAAGACATCCTAATGATAAAGTTGAAGAAGTGAACGTTAGTAATTGTGTCTTTAACGGAGCTCAGAATGGTGCAAGAATCAAAACAATTAGGGGAGGATCTGATGGGTATATTAGGGCGATTTCGTTTAAGGAAATCAGACTAGTGCAGACTAGAAATCCAATTTTTATTGACCAACACTACTACAGTGGGTGGCACTCTGGCAACGGAGAAATAAAGGTAAGCGACATAACATTCAGGGGTTTCCAAGGAACTTCAGCTTCCCATGCAGCAATAAGACTCGAGTGCTCTAACCTGTGGTGCACCAACATTGTAATGGATCATGTCAACATATCTTCAATGATTCCCGGAAAGTCAACCTATTCTTACTGCGAGAATCCCAAGGGAAGATCAAGGTTTACTACACCTGCTGTTCCTTGCCTGGAAAAGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00040 ko01100 map00040 map01100
Pfam Domains
Protein Families
Glyco_hydro_28

Protein Analysis

451

Amino Acids

49.3

Weight (kDa)

8.58

Isoelectric Point (pI)

30.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_28 PF00295 134 - 435 1.5e-72 Glycosyl hydrolases family 28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000579)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G32370 AT4G32375 AT4G32380 AT4G32380
fragaria_vesca FvH4_2g29242 FvH4_2g29270 FvH4_4g07180 FvH4_4g07190 FvH4_6g32320 FvH4_6g35100
malus_domestica MD03G1260700.v1.1 MD03G1260800.v1.1 MD09G1203400.v1.1 MD15G1065500.v1.1 MD15G1124200.v1.1 MD15G1124300.v1.1
prunus_persica Prupe.1G247300_v2.0.a1 Prupe.1G247300_v2.0.a1 Prupe.1G479600_v2.0.a1 Prupe.1G479700_v2.0.a1 Prupe.3G043600_v2.0.a1 Prupe.4G130600_v2.0.a1 Prupe.7G064200_v2.0.a1
pyrus_communis pycom03g20830 pycom15g06200
rosa_chinensis RchiOBHm_Chr2g0140421 RchiOBHm_Chr2g0146281 RchiOBHm_Chr3g0458021 RchiOBHm_Chr3g0481551 RchiOBHm_Chr4g0399361 RchiOBHm_Chr4g0399381 RchiOBHm_Chr4g0399391 RchiOBHm_Chr4g0399401 RchiOBHm_Chr4g0399411 RchiOBHm_Chr4g0399471
rosa_laevigata RLG00000009265 RLG00000009272 RLG00000011536 RLG00000011537 RLG00000019863 RLG00000020193 RLG00000023386
rosa_multiflora Rmu_sc0000384.1_g000011 Rmu_sc0002800.1_g000011 Rmu_sc0002800.1_g000012 Rmu_sc0017309.1_g000001 Rmu_sc0022824.1_g000003
rosa_roxburghii Rroxscaffold_153G00436780 Rroxscaffold_2G00100180 Rroxscaffold_5G00344320 Rroxscaffold_5G00344370 Rroxscaffold_6G00400330 Rroxscaffold_6G00421350 Rroxscaffold_7G00169940 Rroxscaffold_7G00169950
rosa_rugosa Rorug02G0362600 Rorug02G0394100 Rorug03G0024300 Rorug03G0192500 Rorug04G0016900 Rorug04G0017100 Rorug06G0278700
rosa_samantha Rh2CG399600 Rh2CG437200 Rh3AG084800 Rh3BG087600 Rh3CG088100 Rh3DG088500 Rh3DG270800 Rh4BG091900 Rh4BG092300 Rh5AG287300 Rh6DG389600
rosa_wichuraiana Rw0G012400 Rw2G033880 Rw2G036760 Rw3G007220 Rw3G021790 Rw4G007750 Rw4G007770 Rw4G007810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1336
Acc36I ACCTGC 1 cut(s) 1336
AccB1I GGYRCC 1 cut(s) 365
AccB7I CCANNNNNTGG 1 cut(s) 899
AccBSI CCGCTC 1 cut(s) 852
AccI GTMKAC 2 cut(s) 6, 867
AccII CGCG 1 cut(s) 34
AccIII TCCGGA 1 cut(s) 64
AciI CCGC 3 cut(s) 40, 47, 852
AclI AACGTT 1 cut(s) 957
AclWI GGATC 4 cut(s) 56, 57, 1027, 1248
AcoI YGGCCR 1 cut(s) 265
AcuI CTGAAG 1 cut(s) 1161
AfaI GTAC 1 cut(s) 604
AfiI CCNNNNNNNGG 1 cut(s) 899
AflII CTTAAG 2 cut(s) 652, 845
AgeI ACCGGT 1 cut(s) 152
AgsI TTSAA 4 cut(s) 139, 549, 947, 1260
AhlI ACTAGT 1 cut(s) 1063
AjnI CCWGG 3 cut(s) 347, 892, 1341
AleI CACNNNNGTG 1 cut(s) 88
AluBI AGCT 7 cut(s) 202, 216, 335, 480, 582, 983, 1181
AluI AGCT 7 cut(s) 202, 216, 335, 480, 582, 983, 1181
Alw21I GWGCWC 3 cut(s) 985, 1211, 1226
Alw26I GTCTC 2 cut(s) 296, 512
Alw44I GTGCAC 1 cut(s) 1222
AlwI GGATC 4 cut(s) 56, 57, 1027, 1248
Ama87I CYCGRG 3 cut(s) 330, 792, 1202
Aor13HI TCCGGA 1 cut(s) 64
AoxI GGCC 4 cut(s) 253, 265, 313, 345
ApaLI GTGCAC 1 cut(s) 1222
ApeKI GCWGC 2 cut(s) 608, 1190
AsiGI ACCGGT 1 cut(s) 152
AspLEI GCGC 2 cut(s) 34, 633
AspS9I GGNCC 3 cut(s) 54, 594, 890
AsuC2I CCSGG 2 cut(s) 79, 1269
AsuHPI GGTGA 5 cut(s) 142, 311, 464, 502, 839
AsuII TTCGAA 1 cut(s) 807
AvaI CYCGRG 3 cut(s) 330, 792, 1202
AvaII GGWCC 3 cut(s) 54, 594, 890
BaeGI GKGCMC 1 cut(s) 1226
BalI TGGCCA 1 cut(s) 267
BanI GGYRCC 1 cut(s) 365
BanII GRGCYC 1 cut(s) 985
BauI CACGAG 1 cut(s) 876
BbsI GAAGAC 1 cut(s) 931
Bbv12I GWGCWC 3 cut(s) 985, 1211, 1226
BbvI GCAGC 2 cut(s) 620, 1202
BccI CCATC 6 cut(s) 30, 416, 521, 530, 761, 1019
BceAI ACGGC 4 cut(s) 25, 353, 621, 633
BcgI CGANNNNNNTGC 2 cut(s) 629, 663
BciT130I CCWGG 3 cut(s) 349, 894, 1343
BciVI GTATCC 1 cut(s) 85
BcnI CCSGG 2 cut(s) 79, 1269
BcoDI GTCTC 2 cut(s) 296, 512
BcuI ACTAGT 1 cut(s) 1063
BfaI CTAG 5 cut(s) 317, 485, 579, 1064, 1074
BfmI CTRYAG 1 cut(s) 1105
BfrI CTTAAG 2 cut(s) 652, 845
BfuAI ACCTGC 1 cut(s) 1336
BfuI GTATCC 1 cut(s) 85
BglI GCCNNNNNGGC 1 cut(s) 273
BisI GCNGC 3 cut(s) 609, 853, 1191
BlsI GCNGC 3 cut(s) 610, 854, 1192
Bme1390I CCNGG 5 cut(s) 79, 349, 894, 1269, 1343
Bme18I GGWCC 3 cut(s) 54, 594, 890
BmeT110I CYCGRG 3 cut(s) 330, 792, 1202
BmgT120I GGNCC 3 cut(s) 54, 594, 890
BmiI GGNNCC 4 cut(s) 367, 438, 595, 706
BmrFI CCNGG 5 cut(s) 79, 349, 894, 1269, 1343
BmrI ACTGGG 2 cut(s) 315, 600
BmsI GCATC 1 cut(s) 455
BmuI ACTGGG 2 cut(s) 315, 600
BpiI GAAGAC 1 cut(s) 931
BplI GAGNNNNNCTC 2 cut(s) 191, 223
BpmI CTGGAG 1 cut(s) 362
Bpu14I TTCGAA 1 cut(s) 807
BpuMI CCSGG 2 cut(s) 79, 1269
BsaAI YACGTR 1 cut(s) 125
BsaBI GATNNNNATC 1 cut(s) 469
BsaI GGTCTC 1 cut(s) 512
BsaJI CCNNGG 4 cut(s) 256, 615, 1168, 1302
BsaWI WCCGGW 2 cut(s) 64, 152
BsaXI ACNNNNNCTCC 2 cut(s) 513, 543
Bsc4I CCNNNNNNNGG 1 cut(s) 899
Bse118I RCCGGY 1 cut(s) 152
Bse1I ACTGG 4 cut(s) 18, 310, 595, 829
Bse3DI GCAATG 1 cut(s) 837
Bse8I GATNNNNATC 1 cut(s) 469
BseAI TCCGGA 1 cut(s) 64
BseBI CCWGG 3 cut(s) 349, 894, 1343
BseDI CCNNGG 4 cut(s) 256, 615, 1168, 1302
BseGI GGATG 3 cut(s) 393, 470, 928
BseJI GATNNNNATC 1 cut(s) 469
BseLI CCNNNNNNNGG 1 cut(s) 899
BseMI GCAATG 1 cut(s) 837
BseMII CTCAG 2 cut(s) 222, 998
BseNI ACTGG 4 cut(s) 18, 310, 595, 829
BseSI GKGCMC 1 cut(s) 1226
BseXI GCAGC 2 cut(s) 620, 1202
BsgI GTGCAG 1 cut(s) 1088
Bsh1236I CGCG 1 cut(s) 34
BshFI GGCC 4 cut(s) 255, 267, 315, 347
BshNI GGYRCC 1 cut(s) 365
BshTI ACCGGT 1 cut(s) 152
BsiHKAI GWGCWC 3 cut(s) 985, 1211, 1226
BsiHKCI CYCGRG 3 cut(s) 330, 792, 1202
BsiSI CCGG 4 cut(s) 65, 78, 153, 1269
BslFI GGGAC 1 cut(s) 607
BslI CCNNNNNNNGG 1 cut(s) 899
BsmAI GTCTC 2 cut(s) 296, 512
BsmFI GGGAC 1 cut(s) 607
BsnI GGCC 4 cut(s) 255, 267, 315, 347
Bso31I GGTCTC 1 cut(s) 512
BsoBI CYCGRG 3 cut(s) 330, 792, 1202
Bsp119I TTCGAA 1 cut(s) 807
Bsp1286I GDGCHC 3 cut(s) 985, 1211, 1226
Bsp13I TCCGGA 1 cut(s) 64
Bsp143I GATC 6 cut(s) 49, 61, 100, 1019, 1240, 1310
BspACI CCGC 3 cut(s) 40, 47, 852
BspANI GGCC 4 cut(s) 255, 267, 315, 347
BspCNI CTCAG 2 cut(s) 221, 997
BspEI TCCGGA 1 cut(s) 64
BspFNI CGCG 1 cut(s) 34
BspLI GGNNCC 4 cut(s) 367, 438, 595, 706
BspMI ACCTGC 1 cut(s) 1336
BspPI GGATC 4 cut(s) 56, 57, 1027, 1248
BspT104I TTCGAA 1 cut(s) 807
BspT107I GGYRCC 1 cut(s) 365
BspTI CTTAAG 2 cut(s) 652, 845
BspTNI GGTCTC 1 cut(s) 512
BsrBI CCGCTC 1 cut(s) 852
BsrDI GCAATG 1 cut(s) 837
BsrFI RCCGGY 1 cut(s) 152
BsrI ACTGG 4 cut(s) 18, 310, 595, 829
BssAI RCCGGY 1 cut(s) 152
BssECI CCNNGG 4 cut(s) 256, 615, 1168, 1302
BssMI GATC 6 cut(s) 49, 61, 100, 1019, 1240, 1310
BssNAI GTATAC 1 cut(s) 868
BssSI CACGAG 1 cut(s) 876
BssT1I CCWWGG 3 cut(s) 256, 1168, 1302
Bst1107I GTATAC 1 cut(s) 868
Bst2BI CACGAG 1 cut(s) 876
Bst2UI CCWGG 3 cut(s) 349, 894, 1343
Bst4CI ACNGT 1 cut(s) 1109
BstAFI CTTAAG 2 cut(s) 652, 845
BstBAI YACGTR 1 cut(s) 125
BstBI TTCGAA 1 cut(s) 807
BstC8I GCNNGC 1 cut(s) 482
BstDEI CTNAG 2 cut(s) 208, 984
BstDSI CCRYGG 1 cut(s) 615
BstF5I GGATG 3 cut(s) 393, 470, 928
BstFNI CGCG 1 cut(s) 34
BstHHI GCGC 2 cut(s) 34, 633
BstKTI GATC 6 cut(s) 52, 64, 103, 1022, 1243, 1313
BstMAI GTCTC 2 cut(s) 296, 512
BstMBI GATC 6 cut(s) 49, 61, 100, 1019, 1240, 1310
BstMWI GCNNNNNNNGC 4 cut(s) 273, 365, 617, 1187
BstNI CCWGG 3 cut(s) 349, 894, 1343
BstNSI RCATGY 1 cut(s) 888
BstSCI CCNGG 5 cut(s) 77, 347, 892, 1267, 1341
BstSFI CTRYAG 1 cut(s) 1105
BstSLI GKGCMC 1 cut(s) 1226
BstUI CGCG 1 cut(s) 34
BstV1I GCAGC 2 cut(s) 620, 1202
BstV2I GAAGAC 1 cut(s) 931
BstX2I RGATCY 2 cut(s) 61, 1019
BstYI RGATCY 2 cut(s) 61, 1019
BstZ17I GTATAC 1 cut(s) 868
BsuI GTATCC 1 cut(s) 85
BsuRI GGCC 4 cut(s) 255, 267, 315, 347
BtgI CCRYGG 1 cut(s) 615
BtgZI GCGATG 1 cut(s) 49
BtsCI GGATG 3 cut(s) 393, 470, 928
BtsIMutI CAGTG 3 cut(s) 25, 762, 1114
BveI ACCTGC 1 cut(s) 1336
Cac8I GCNNGC 1 cut(s) 482
CfoI GCGC 2 cut(s) 34, 633
Cfr10I RCCGGY 1 cut(s) 152
Cfr13I GGNCC 3 cut(s) 54, 594, 890
CsiI ACCWGGT 1 cut(s) 892
Csp6I GTAC 1 cut(s) 603
CspAI ACCGGT 1 cut(s) 152
CviAII CATG 6 cut(s) 701, 734, 885, 899, 1187, 1244
CviQI GTAC 1 cut(s) 603
DdeI CTNAG 2 cut(s) 208, 984
DpnI GATC 6 cut(s) 51, 63, 102, 1021, 1242, 1312
DpnII GATC 6 cut(s) 49, 61, 100, 1019, 1240, 1310
DraI TTTAAA 1 cut(s) 820
EaeI YGGCCR 1 cut(s) 265
Ecl136II GAGCTC 1 cut(s) 983
Eco130I CCWWGG 3 cut(s) 256, 1168, 1302
Eco147I AGGCCT 1 cut(s) 347
Eco24I GRGCYC 1 cut(s) 985
Eco31I GGTCTC 1 cut(s) 512
Eco47I GGWCC 3 cut(s) 54, 594, 890
Eco53kI GAGCTC 1 cut(s) 983
Eco57I CTGAAG 1 cut(s) 1161
Eco88I CYCGRG 3 cut(s) 330, 792, 1202
EcoICRI GAGCTC 1 cut(s) 983
EcoRII CCWGG 3 cut(s) 347, 892, 1341
EcoT14I CCWWGG 3 cut(s) 256, 1168, 1302
EcoT38I GRGCYC 1 cut(s) 985
ErhI CCWWGG 3 cut(s) 256, 1168, 1302
FaeI CATG 6 cut(s) 704, 737, 888, 902, 1190, 1247
FaqI GGGAC 1 cut(s) 607
FatI CATG 6 cut(s) 700, 733, 884, 898, 1186, 1243
FauI CCCGC 1 cut(s) 33
FblI GTMKAC 2 cut(s) 6, 867
Fnu4HI GCNGC 3 cut(s) 609, 853, 1191
FokI GGATG 3 cut(s) 380, 477, 915
FriOI GRGCYC 1 cut(s) 985
Fsp4HI GCNGC 3 cut(s) 609, 853, 1191
FspBI CTAG 5 cut(s) 317, 485, 579, 1064, 1074
GlaI GCGC 2 cut(s) 33, 632
GluI GCNGC 3 cut(s) 609, 853, 1191
GsuI CTGGAG 1 cut(s) 362
HaeIII GGCC 4 cut(s) 255, 267, 315, 347
HapII CCGG 4 cut(s) 65, 78, 153, 1269
HhaI GCGC 2 cut(s) 34, 633
Hin1II CATG 6 cut(s) 704, 737, 888, 902, 1190, 1247
Hin6I GCGC 2 cut(s) 32, 631
HinP1I GCGC 2 cut(s) 32, 631
HincII GTYRAC 4 cut(s) 7, 789, 1249, 1278
HindII GTYRAC 4 cut(s) 7, 789, 1249, 1278
HinfI GANTC 9 cut(s) 326, 470, 559, 660, 809, 999, 1200, 1264, 1297
HpaII CCGG 4 cut(s) 65, 78, 153, 1269
HphI GGTGA 5 cut(s) 142, 311, 464, 502, 839
Hpy188I TCNGA 4 cut(s) 914, 987, 1024, 1061
Hpy188III TCNNGA 5 cut(s) 65, 330, 341, 474, 694
Hpy99I CGWCG 2 cut(s) 11, 448
HpyAV CCTTC 2 cut(s) 450, 496
HpyCH4III ACNGT 1 cut(s) 1109
HpyCH4IV ACGT 2 cut(s) 124, 957
HpyCH4V TGCA 7 cut(s) 743, 837, 842, 995, 1069, 1190, 1224
HpyF10VI GCNNNNNNNGC 4 cut(s) 273, 365, 617, 1187
HpyF3I CTNAG 2 cut(s) 208, 984
HpySE526I ACGT 2 cut(s) 124, 957
Hsp92II CATG 6 cut(s) 704, 737, 888, 902, 1190, 1247
HspAI GCGC 2 cut(s) 32, 631
Kpn2I TCCGGA 1 cut(s) 64
Kzo9I GATC 6 cut(s) 49, 61, 100, 1019, 1240, 1310
LmnI GCTCC 4 cut(s) 199, 442, 521, 980
Lsp1109I GCAGC 2 cut(s) 620, 1202
LweI GCATC 1 cut(s) 455
MabI ACCWGGT 1 cut(s) 892
MaeI CTAG 5 cut(s) 317, 485, 579, 1064, 1074
MaeII ACGT 2 cut(s) 124, 957
MaeIII GTNAC 4 cut(s) 81, 143, 155, 560
MalI GATC 6 cut(s) 51, 63, 102, 1021, 1242, 1312
MbiI CCGCTC 1 cut(s) 852
MboI GATC 6 cut(s) 49, 61, 100, 1019, 1240, 1310
MboII GAAGA 8 cut(s) 35, 106, 141, 180, 936, 959, 1248, 1320
MfeI CAATTG 1 cut(s) 598
MflI RGATCY 2 cut(s) 61, 1019
MhlI GDGCHC 3 cut(s) 985, 1211, 1226
MlsI TGGCCA 1 cut(s) 267
MluCI AATT 6 cut(s) 549, 598, 771, 964, 1008, 1083
MluNI TGGCCA 1 cut(s) 267
MlyI GAGTC 2 cut(s) 568, 1194
MmeI TCCRAC 2 cut(s) 352, 892
MnlI CCTC 6 cut(s) 217, 337, 427, 579, 756, 1010
Mox20I TGGCCA 1 cut(s) 267
MroI TCCGGA 1 cut(s) 64
MscI TGGCCA 1 cut(s) 267
MseI TTAA 6 cut(s) 194, 653, 819, 846, 975, 1050
MslI CAYNNNNRTG 4 cut(s) 88, 738, 933, 1235
Msp20I TGGCCA 1 cut(s) 267
MspCI CTTAAG 2 cut(s) 652, 845
MspI CCGG 4 cut(s) 65, 78, 153, 1269
MspR9I CCNGG 5 cut(s) 79, 349, 894, 1269, 1343
MunI CAATTG 1 cut(s) 598
MvaI CCWGG 3 cut(s) 349, 894, 1343
MvnI CGCG 1 cut(s) 34
MwoI GCNNNNNNNGC 4 cut(s) 273, 365, 617, 1187
NciI CCSGG 2 cut(s) 79, 1269
NdeII GATC 6 cut(s) 49, 61, 100, 1019, 1240, 1310
NlaIII CATG 6 cut(s) 704, 737, 888, 902, 1190, 1247
NlaIV GGNNCC 4 cut(s) 367, 438, 595, 706
NmuCI GTSAC 3 cut(s) 81, 143, 560
NspI RCATGY 1 cut(s) 888
NspV TTCGAA 1 cut(s) 807
OliI CACNNNNGTG 1 cut(s) 88
PaeR7I CTCGAG 3 cut(s) 330, 792, 1202
PaqCI CACCTGC 1 cut(s) 1336
PceI AGGCCT 1 cut(s) 347
PfeI GAWTC 7 cut(s) 326, 470, 660, 809, 999, 1264, 1297
PflFI GACNNNGTC 1 cut(s) 894
PflMI CCANNNNNTGG 1 cut(s) 899
PfoI TCCNGGA 1 cut(s) 1267
PinAI ACCGGT 1 cut(s) 152
PkrI GCNGC 3 cut(s) 610, 854, 1192
PleI GAGTC 2 cut(s) 567, 1194
PpsI GAGTC 2 cut(s) 567, 1194
Ppu21I YACGTR 1 cut(s) 125
Psp124BI GAGCTC 1 cut(s) 985
Psp1406I AACGTT 1 cut(s) 957
Psp6I CCWGG 3 cut(s) 347, 892, 1341
PspGI CCWGG 3 cut(s) 347, 892, 1341
PspN4I GGNNCC 4 cut(s) 367, 438, 595, 706
PspPI GGNCC 3 cut(s) 54, 594, 890
PspXI VCTCGAGB 2 cut(s) 792, 1202
PsuI RGATCY 2 cut(s) 61, 1019
PsyI GACNNNGTC 1 cut(s) 894
RsaI GTAC 1 cut(s) 604
RsaNI GTAC 1 cut(s) 603
RseI CAYNNNNRTG 4 cut(s) 88, 738, 933, 1235
SacI GAGCTC 1 cut(s) 985
SalI GTCGAC 1 cut(s) 5
SaqAI TTAA 6 cut(s) 194, 653, 819, 846, 975, 1050
SatI GCNGC 3 cut(s) 609, 853, 1191
Sau3AI GATC 6 cut(s) 49, 61, 100, 1019, 1240, 1310
Sau96I GGNCC 3 cut(s) 54, 594, 890
SchI GAGTC 2 cut(s) 568, 1194
ScrFI CCNGG 5 cut(s) 79, 349, 894, 1269, 1343
SduI GDGCHC 3 cut(s) 985, 1211, 1226
SexAI ACCWGGT 1 cut(s) 892
SfaNI GCATC 1 cut(s) 455
SfcI CTRYAG 1 cut(s) 1105
Sfr274I CTCGAG 3 cut(s) 330, 792, 1202
SfuI TTCGAA 1 cut(s) 807
SinI GGWCC 3 cut(s) 54, 594, 890
SlaI CTCGAG 3 cut(s) 330, 792, 1202
SmiMI CAYNNNNRTG 4 cut(s) 88, 738, 933, 1235
SmlI CTYRAG 5 cut(s) 330, 652, 792, 845, 1202
SmoI CTYRAG 5 cut(s) 330, 652, 792, 845, 1202
SpeI ACTAGT 1 cut(s) 1063
Sse9I AATT 6 cut(s) 549, 598, 771, 964, 1008, 1083
SseBI AGGCCT 1 cut(s) 347
SsiI CCGC 3 cut(s) 40, 47, 852
SspI AATATT 1 cut(s) 802
SspMI CTAG 5 cut(s) 317, 485, 579, 1064, 1074
SstI GAGCTC 1 cut(s) 985
StuI AGGCCT 1 cut(s) 347
StyD4I CCNGG 5 cut(s) 77, 347, 892, 1267, 1341
StyI CCWWGG 3 cut(s) 256, 1168, 1302
TaaI ACNGT 1 cut(s) 1109
TaiI ACGT 2 cut(s) 127, 960
TaqI TCGA 7 cut(s) 6, 331, 443, 571, 793, 807, 1203
TaqII GACCGA 1 cut(s) 42
TasI AATT 6 cut(s) 549, 598, 771, 964, 1008, 1083
TauI GCSGC 1 cut(s) 855
TfiI GAWTC 7 cut(s) 326, 470, 660, 809, 999, 1264, 1297
Tru1I TTAA 6 cut(s) 194, 653, 819, 846, 975, 1050
Tru9I TTAA 6 cut(s) 194, 653, 819, 846, 975, 1050
TscAI CASTG 3 cut(s) 25, 769, 1114
TseFI GTSAC 3 cut(s) 81, 143, 560
TseI GCWGC 2 cut(s) 608, 1190
Tsp45I GTSAC 3 cut(s) 81, 143, 560
TspDTI ATGAA 2 cut(s) 228, 722
TspGWI ACGGA 2 cut(s) 993, 1143
TspRI CASTG 3 cut(s) 25, 769, 1114
Tth111I GACNNNGTC 1 cut(s) 894
Van91I CCANNNNNTGG 1 cut(s) 899
Vha464I CTTAAG 2 cut(s) 652, 845
VneI GTGCAC 1 cut(s) 1222
VpaK11BI GGWCC 3 cut(s) 54, 594, 890
XceI RCATGY 1 cut(s) 888
XcmI CCANNNNNNNNNTGG 1 cut(s) 1234
XhoI CTCGAG 3 cut(s) 330, 792, 1202
XmiI GTMKAC 2 cut(s) 6, 867
XspI CTAG 5 cut(s) 317, 485, 579, 1064, 1074
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.