Rorug03G0330500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0001250
Physical Location & Seq
Forward (+)
38359922 .. 38375313
15392 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0330500.1

Sequence Viewer

Length: 2196 bp
ATGGAAGAAGAAGAAGAAGAAGAGCAAGTGGCGACGGAGCCTCCCAAAATTCACCGCCTAGACGAGTCCGTAGTGAACCGAATCGCCGCCGGTGAGGTCATCCAACGCCCCGTCTCGGCCGTCAAGGAGCTCGTCGAGAACAGCCTCGACGCCCACTCCTCCTCCATTAACGTCGTCGTCAAGGACGGCGGCCTCAAACTCATCCAAGTCTCCGACGACGGCCACGGAATCCGATATGAGGACTTGCCGATACTGTGCCAGCGGCATACGACGTCGAAATTGTCGTCGTTTGAAGACCTGCAGTCCATAAAGTCGATGGGGTTTCGAGGAGAAGCTCTTGCGAGCATGACGTATGTGGCTCATGTGACGGTGACGACGATCACCAAAGGGCAGTTGCATGGTTACAGGGTTTCTTATAAAGATGGAGTGATGGAGAATGAGCCCAAGGCGTGTGCTGCCGTAAAAGGAACTCAGATAATGATTGAGAACTTATTCTATAACATGTCTGCCCGGAGAAAGAATCTGCAAAACTCTGCTGATGATTATTCAAAGATTGTAGATTTGTTAAGCCGGTTTGCCATTCATCACACAAGTGTTAGCTTCTCCTGCAGAAAGCATGGAGCCGGTAGAGCAGATGTTAGTTCTGTTGCCACAATATCAAGAATTGATGCGATTCGTTCAGTTTACGGGGTGTCAGTTGCCCGCAGTCTGATGAAAGTAGAAGAAGCTTTGGACAATGATCCGTCAAGCTCAGTTTTCCAGATGGATGGCTTTATCTCCAATTCTGAATATGTTGCGAAGAAGATAACTATGGTGCTTTTTATAAACGATAGATTGGTGGATTGCACTGCATTGAAGAGAGCTCTAGAAATTGTTTATGCCGCTACATTGCCGAAAGCAGCAAAACCCTTCATATACATGTCAATTGTATTACCACCTGAACATGTTGATGTGAATGTTCACCCAACAAAGAGAGAGGTGAGTCTTCTGAATCAGGAAGTCATCATTGAGAAGATACAGTCAGTGGTTGAATCAAGATTGAGAAGCTCCAATGAGACACAGATATTTCAGGAGCAGACAGTTGAACCACCTTCATCCAGCCAAATGATTTCTAGCAAGGATTCAAATCGTAATCCTACGCCATCTGGGTCAAAATCACAAAAGGTTCCAGTGAATAAAATGGTCAGAACAGATTCATCGGATCCTGCTGGAAGGTTGCATATTTACTTGCACGCAGAGTCTCGTGGCCATCTTGAAAAGAATACTAGCTTGACTGCTGTTAGATCGTCTGTTAGACAAAGAAGGAACCCAAAGGAAACTGCTGATCTGAGTAGCATTCAGGAGCTTATTGCTGATATTGATAGCAATTGTCATTCTGGTATGCTAGACATTGTGAGACACTGCACATACATTGGAATGGCAGATGACGTCTTTGCATTGCTTCAGCATGACACACACCTCTACCTTGCAAATATAGTGAGCTTGAGCAAAGAGCTCATGTATCAGCAAGTTCTACGTCGATTTGCTCATTTTAATGCTATACAATTAAGTAACCCAGCCCCGCTGAAGGAGTTGATTGTGTTGGCACTGAAAGAGGGGGACACAGATCCAGAATCCACTGAGAATGATGAACTAAATGAAAAGATTGCAGAAATGAATTCAGAACTACTTAAGCAAAAGGCTGATCTACTAGAGGAGTACTTTTCCATTCACATAGATAAAGATGGAAATTTGTCCAGGCTTCCTGTCATACTTGACCAATACACACCTGACATGGATCATGTCCCAGAATTTGTGCTTTGTTTGGGCAACGATGTTGATTGGGAAGAAGAGAAAAAATGCTTCCAAGTAATTTCAGCTGCACTTGGGAACTTTTACGCCATGCATCCTCCTATGTTACCCAACCCATCTGGTGATGGTTTGCAATTTTACCAAAAAAGGAAGTTGTTCAGGAATAATGAAGGAAGTCTCTCTTGCAATACTGGTGCGGATGATATGATGACGGAGGACGAAATTGAGCACGAACTAGTTGCAGAAGCAGAGACTGCATGGGCACAGCGCGAATGGTCAATCCAGCATGTATTGTTTCCATCAATGAGGCTCTTTTTTAAGCCACCAAATTCTATGGCTACAAATGGAACATTTGTTCGAGTTGCTTCACTAGAAAAGCTGTACAGGATTTTTGAAAGATGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AT_hook

Protein Analysis

731

Amino Acids

82.04

Weight (kDa)

5.51

Isoelectric Point (pI)

46.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HATPase_c PF02518 36 - 99 9.2e-07 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_3 PF13589 39 - 141 1.8e-14 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNA_mis_repair PF01119 225 - 347 2.7e-28 DNA mismatch repair protein, C-terminal domain
Mlh1_C PF16413 443 - 731 1.9e-83 DNA mismatch repair protein Mlh1 C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 417, 824
AatII GACGTC 2 cut(s) 275, 1431
Acc36I ACCTGC 1 cut(s) 306
AccII CGCG 1 cut(s) 2061
AciI CCGC 8 cut(s) 55, 87, 189, 262, 703, 882, 1562, 1988
AclWI GGATC 5 cut(s) 734, 1196, 1209, 1601, 1785
AcoI YGGCCR 3 cut(s) 117, 220, 1246
AcsI RAATTY 5 cut(s) 48, 1657, 1729, 1790, 2119
AcuI CTGAAG 2 cut(s) 1427, 1586
AcyI GRCGYC 3 cut(s) 150, 272, 1428
AfaI GTAC 2 cut(s) 1700, 2174
AfiI CCNNNNNNNGG 3 cut(s) 115, 238, 1567
AflII CTTAAG 1 cut(s) 1670
AflIII ACRYGT 3 cut(s) 501, 918, 943
AgsI TTSAA 8 cut(s) 293, 549, 856, 1031, 1085, 1125, 1256, 2186
AhdI GACNNNNNGTC 1 cut(s) 301
AhlI ACTAGT 1 cut(s) 2026
AjnI CCWGG 1 cut(s) 1736
AleI CACNNNNGTG 1 cut(s) 591
AloI GAACNNNNNNTCC 2 cut(s) 2130, 2162
Alw21I GWGCWC 4 cut(s) 132, 865, 1497, 2022
Alw26I GTCTC 7 cut(s) 118, 214, 1049, 1245, 1390, 1973, 2036
AlwI GGATC 5 cut(s) 734, 1196, 1209, 1601, 1785
AlwNI CAGNNNCTG 1 cut(s) 2045
AoxI GGCC 4 cut(s) 117, 190, 220, 1246
ApeKI GCWGC 3 cut(s) 455, 899, 1859
ApoI RAATTY 5 cut(s) 48, 1657, 1729, 1790, 2119
ArsI GACNNNNNNTTYG 2 cut(s) 269, 301
Asp700I GAANNNNTTC 3 cut(s) 491, 1192, 1946
AspLEI GCGC 1 cut(s) 2061
AsuC2I CCSGG 1 cut(s) 511
AsuHPI GGTGA 7 cut(s) 44, 104, 373, 382, 953, 991, 1925
BaeGI GKGCMC 1 cut(s) 2056
BalI TGGCCA 1 cut(s) 1248
BamHI GGATCC 1 cut(s) 1201
BanII GRGCYC 4 cut(s) 132, 444, 865, 1497
BauI CACGAG 1 cut(s) 1242
BbsI GAAGAC 2 cut(s) 300, 977
Bbv12I GWGCWC 4 cut(s) 132, 865, 1497, 2022
BbvI GCAGC 3 cut(s) 442, 911, 1846
BceAI ACGGC 4 cut(s) 104, 202, 235, 443
BcgI CGANNNNNNTGC 2 cut(s) 2012, 2046
BciT130I CCWGG 1 cut(s) 1738
BcnI CCSGG 1 cut(s) 511
BcoDI GTCTC 7 cut(s) 118, 214, 1049, 1245, 1390, 1973, 2036
BcuI ACTAGT 1 cut(s) 2026
BfaI CTAG 8 cut(s) 59, 866, 1113, 1266, 1385, 1691, 2027, 2162
BfmI CTRYAG 2 cut(s) 299, 607
BfrI CTTAAG 1 cut(s) 1670
BfuAI ACCTGC 1 cut(s) 306
BisI GCNGC 7 cut(s) 87, 190, 263, 456, 882, 900, 1860
BlsI GCNGC 7 cut(s) 88, 191, 264, 457, 883, 901, 1861
BmcAI AGTACT 1 cut(s) 1700
Bme1390I CCNGG 2 cut(s) 511, 1738
BmeRI GACNNNNNGTC 1 cut(s) 301
BmiI GGNNCC 5 cut(s) 39, 622, 1167, 1203, 1307
BmrFI CCNGG 2 cut(s) 511, 1738
BmsI GCATC 3 cut(s) 658, 1894, 2180
BpiI GAAGAC 2 cut(s) 300, 977
BpuEI CTTGAG 1 cut(s) 1504
BpuMI CCSGG 1 cut(s) 511
BsaBI GATNNNNATC 1 cut(s) 1125
BsaHI GRCGYC 3 cut(s) 150, 272, 1428
BsaJI CCNNGG 2 cut(s) 223, 444
BsaXI ACNNNNNCTCC 6 cut(s) 25, 55, 140, 146, 170, 176
Bsc4I CCNNNNNNNGG 3 cut(s) 115, 238, 1567
Bse118I RCCGGY 3 cut(s) 89, 570, 623
Bse1I ACTGG 2 cut(s) 1169, 1987
Bse3DI GCAATG 2 cut(s) 887, 1436
Bse8I GATNNNNATC 1 cut(s) 1125
BseBI CCWGG 1 cut(s) 1738
BseDI CCNNGG 2 cut(s) 223, 444
BseGI GGATG 6 cut(s) 99, 201, 772, 1094, 1885, 1996
BseJI GATNNNNATC 1 cut(s) 1125
BseLI CCNNNNNNNGG 3 cut(s) 115, 238, 1567
BseMI GCAATG 2 cut(s) 887, 1436
BseMII CTCAG 4 cut(s) 485, 765, 1319, 1611
BseNI ACTGG 2 cut(s) 1169, 1987
BseRI GAGGAG 4 cut(s) 148, 151, 342, 1709
BseSI GKGCMC 1 cut(s) 2056
BseX3I CGGCCG 1 cut(s) 117
BseXI GCAGC 3 cut(s) 442, 911, 1846
BseYI CCCAGC 1 cut(s) 1555
BsgI GTGCAG 2 cut(s) 1387, 1845
Bsh1236I CGCG 1 cut(s) 2061
Bsh1285I CGRYCG 1 cut(s) 120
BshFI GGCC 4 cut(s) 119, 192, 222, 1248
BsiEI CGRYCG 1 cut(s) 120
BsiHKAI GWGCWC 4 cut(s) 132, 865, 1497, 2022
BsiSI CCGG 4 cut(s) 90, 511, 571, 624
BslFI GGGAC 2 cut(s) 1613, 1769
BslI CCNNNNNNNGG 3 cut(s) 115, 238, 1567
BsmAI GTCTC 7 cut(s) 118, 214, 1049, 1245, 1390, 1973, 2036
BsmBI CGTCTC 1 cut(s) 118
BsmFI GGGAC 2 cut(s) 1613, 1769
BsmI GAATGC 1 cut(s) 1335
BsnI GGCC 4 cut(s) 119, 192, 222, 1248
Bsp1286I GDGCHC 6 cut(s) 132, 444, 865, 1497, 2022, 2056
Bsp1407I TGTACA 1 cut(s) 2172
Bsp143I GATC 8 cut(s) 378, 739, 1201, 1283, 1324, 1606, 1684, 1777
BspACI CCGC 8 cut(s) 55, 87, 189, 262, 703, 882, 1562, 1988
BspANI GGCC 4 cut(s) 119, 192, 222, 1248
BspCNI CTCAG 4 cut(s) 484, 764, 1320, 1612
BspFNI CGCG 1 cut(s) 2061
BspLI GGNNCC 5 cut(s) 39, 622, 1167, 1203, 1307
BspMAI CTGCAG 2 cut(s) 303, 611
BspMI ACCTGC 1 cut(s) 306
BspPI GGATC 5 cut(s) 734, 1196, 1209, 1601, 1785
BspQI GCTCTTC 1 cut(s) 15
BspTI CTTAAG 1 cut(s) 1670
BsrDI GCAATG 2 cut(s) 887, 1436
BsrFI RCCGGY 3 cut(s) 89, 570, 623
BsrGI TGTACA 1 cut(s) 2172
BsrI ACTGG 2 cut(s) 1169, 1987
BssAI RCCGGY 3 cut(s) 89, 570, 623
BssECI CCNNGG 2 cut(s) 223, 444
BssMI GATC 8 cut(s) 378, 739, 1201, 1283, 1324, 1606, 1684, 1777
BssNI GRCGYC 3 cut(s) 150, 272, 1428
BssSI CACGAG 1 cut(s) 1242
BssT1I CCWWGG 1 cut(s) 444
Bst2BI CACGAG 1 cut(s) 1242
Bst2UI CCWGG 1 cut(s) 1738
Bst4CI ACNGT 4 cut(s) 255, 370, 1020, 1081
Bst6I CTCTTC 3 cut(s) 15, 851, 1824
BstACI GRCGYC 3 cut(s) 150, 272, 1428
BstAFI CTTAAG 1 cut(s) 1670
BstAPI GCANNNNNTGC 1 cut(s) 2045
BstAUI TGTACA 1 cut(s) 2172
BstC8I GCNNGC 4 cut(s) 260, 343, 703, 1233
BstDEI CTNAG 4 cut(s) 471, 751, 1328, 1620
BstDSI CCRYGG 1 cut(s) 223
BstF5I GGATG 6 cut(s) 99, 201, 772, 1094, 1885, 1996
BstFNI CGCG 1 cut(s) 2061
BstHHI GCGC 1 cut(s) 2061
BstKTI GATC 8 cut(s) 381, 742, 1204, 1286, 1327, 1609, 1687, 1780
BstMAI GTCTC 7 cut(s) 118, 214, 1049, 1245, 1390, 1973, 2036
BstMBI GATC 8 cut(s) 378, 739, 1201, 1283, 1324, 1606, 1684, 1777
BstMCI CGRYCG 1 cut(s) 120
BstMWI GCNNNNNNNGC 4 cut(s) 455, 606, 629, 2045
BstNI CCWGG 1 cut(s) 1738
BstNSI RCATGY 4 cut(s) 505, 922, 947, 2081
BstSCI CCNGG 2 cut(s) 509, 1736
BstSFI CTRYAG 2 cut(s) 299, 607
BstSLI GKGCMC 1 cut(s) 2056
BstUI CGCG 1 cut(s) 2061
BstV1I GCAGC 3 cut(s) 442, 911, 1846
BstV2I GAAGAC 2 cut(s) 300, 977
BstX2I RGATCY 2 cut(s) 1201, 1606
BstXI CCANNNNNNTGG 1 cut(s) 767
BstYI RGATCY 2 cut(s) 1201, 1606
BstZI CGGCCG 1 cut(s) 117
BsuRI GGCC 4 cut(s) 119, 192, 222, 1248
BtgI CCRYGG 1 cut(s) 223
BtsCI GGATG 6 cut(s) 99, 201, 772, 1094, 1885, 1996
BtsI GCAGTG 2 cut(s) 846, 1399
BtsIMutI CAGTG 6 cut(s) 846, 1029, 1176, 1399, 1586, 1617
BveI ACCTGC 1 cut(s) 306
Cac8I GCNNGC 4 cut(s) 260, 343, 703, 1233
CaiI CAGNNNCTG 1 cut(s) 2045
CfoI GCGC 1 cut(s) 2061
Cfr10I RCCGGY 3 cut(s) 89, 570, 623
CseI GACGC 1 cut(s) 158
Csp6I GTAC 2 cut(s) 1699, 2173
CviQI GTAC 2 cut(s) 1699, 2173
DdeI CTNAG 4 cut(s) 471, 751, 1328, 1620
DpnI GATC 8 cut(s) 380, 741, 1203, 1285, 1326, 1608, 1686, 1779
DpnII GATC 8 cut(s) 378, 739, 1201, 1283, 1324, 1606, 1684, 1777
DriI GACNNNNNGTC 1 cut(s) 301
EaeI YGGCCR 3 cut(s) 117, 220, 1246
EagI CGGCCG 1 cut(s) 117
Eam1104I CTCTTC 3 cut(s) 15, 851, 1824
Eam1105I GACNNNNNGTC 1 cut(s) 301
EarI CTCTTC 3 cut(s) 15, 851, 1824
Ecl136II GAGCTC 3 cut(s) 130, 863, 1495
EclXI CGGCCG 1 cut(s) 117
Eco130I CCWWGG 1 cut(s) 444
Eco24I GRGCYC 4 cut(s) 132, 444, 865, 1497
Eco52I CGGCCG 1 cut(s) 117
Eco53kI GAGCTC 3 cut(s) 130, 863, 1495
Eco57I CTGAAG 2 cut(s) 1427, 1586
EcoICRI GAGCTC 3 cut(s) 130, 863, 1495
EcoRI GAATTC 1 cut(s) 1657
EcoRII CCWGG 1 cut(s) 1736
EcoT14I CCWWGG 1 cut(s) 444
EcoT22I ATGCAT 1 cut(s) 1887
EcoT38I GRGCYC 4 cut(s) 132, 444, 865, 1497
ErhI CCWWGG 1 cut(s) 444
Esp3I CGTCTC 1 cut(s) 118
FalI AAGNNNNNCTT 2 cut(s) 1957, 1989
FaqI GGGAC 2 cut(s) 1613, 1769
FauI CCCGC 2 cut(s) 710, 1569
Fnu4HI GCNGC 7 cut(s) 87, 190, 263, 456, 882, 900, 1860
FokI GGATG 6 cut(s) 86, 188, 779, 1081, 1872, 2003
FriOI GRGCYC 4 cut(s) 132, 444, 865, 1497
Fsp4HI GCNGC 7 cut(s) 87, 190, 263, 456, 882, 900, 1860
FspBI CTAG 8 cut(s) 59, 866, 1113, 1266, 1385, 1691, 2027, 2162
GlaI GCGC 1 cut(s) 2060
GluI GCNGC 7 cut(s) 87, 190, 263, 456, 882, 900, 1860
GsaI CCCAGC 1 cut(s) 1559
HaeIII GGCC 4 cut(s) 119, 192, 222, 1248
HapII CCGG 4 cut(s) 90, 511, 571, 624
HgaI GACGC 1 cut(s) 158
HhaI GCGC 1 cut(s) 2061
Hin1I GRCGYC 3 cut(s) 150, 272, 1428
Hin6I GCGC 1 cut(s) 2059
HinP1I GCGC 1 cut(s) 2059
HindIII AAGCTT 1 cut(s) 726
HpaII CCGG 4 cut(s) 90, 511, 571, 624
HphI GGTGA 7 cut(s) 44, 104, 373, 382, 953, 991, 1925
Hpy166II GTNNAC 3 cut(s) 76, 685, 961
Hpy8I GTNNAC 3 cut(s) 76, 685, 961
HpyAV CCTTC 6 cut(s) 919, 1101, 1206, 1296, 1561, 1955
HpyCH4III ACNGT 4 cut(s) 255, 370, 1020, 1081
HpyCH4IV ACGT 5 cut(s) 171, 272, 350, 1428, 1516
HpyF10VI GCNNNNNNNGC 4 cut(s) 455, 606, 629, 2045
HpyF3I CTNAG 4 cut(s) 471, 751, 1328, 1620
HpySE526I ACGT 5 cut(s) 171, 272, 350, 1428, 1516
Hsp92I GRCGYC 3 cut(s) 150, 272, 1428
HspAI GCGC 1 cut(s) 2059
Kzo9I GATC 8 cut(s) 378, 739, 1201, 1283, 1324, 1606, 1684, 1777
LguI GCTCTTC 1 cut(s) 15
LmnI GCTCC 6 cut(s) 37, 127, 620, 1052, 1072, 1342
Lsp1109I GCAGC 3 cut(s) 442, 911, 1846
LweI GCATC 3 cut(s) 658, 1894, 2180
MaeI CTAG 8 cut(s) 59, 866, 1113, 1266, 1385, 1691, 2027, 2162
MaeII ACGT 5 cut(s) 171, 272, 350, 1428, 1516
MaeIII GTNAC 5 cut(s) 364, 370, 401, 1550, 1896
MalI GATC 8 cut(s) 380, 741, 1203, 1285, 1326, 1608, 1686, 1779
MboI GATC 8 cut(s) 378, 739, 1201, 1283, 1324, 1606, 1684, 1777
MfeI CAATTG 2 cut(s) 924, 1366
MflI RGATCY 2 cut(s) 1201, 1606
MhlI GDGCHC 6 cut(s) 132, 444, 865, 1497, 2022, 2056
MlsI TGGCCA 1 cut(s) 1248
MluNI TGGCCA 1 cut(s) 1248
MlyI GAGTC 3 cut(s) 74, 991, 1247
MmeI TCCRAC 2 cut(s) 127, 237
Mox20I TGGCCA 1 cut(s) 1248
Mph1103I ATGCAT 1 cut(s) 1887
MroXI GAANNNNTTC 3 cut(s) 491, 1192, 1946
MscI TGGCCA 1 cut(s) 1248
MseI TTAA 6 cut(s) 168, 566, 1533, 1547, 1671, 2109
MslI CAYNNNNRTG 5 cut(s) 591, 917, 948, 1415, 1533
Msp20I TGGCCA 1 cut(s) 1248
MspA1I CMGCKG 3 cut(s) 262, 1564, 1859
MspCI CTTAAG 1 cut(s) 1670
MspI CCGG 4 cut(s) 90, 511, 571, 624
MspR9I CCNGG 2 cut(s) 511, 1738
MunI CAATTG 2 cut(s) 924, 1366
Mva1269I GAATGC 1 cut(s) 1335
MvaI CCWGG 1 cut(s) 1738
MvnI CGCG 1 cut(s) 2061
MwoI GCNNNNNNNGC 4 cut(s) 455, 606, 629, 2045
NciI CCSGG 1 cut(s) 511
NdeII GATC 8 cut(s) 378, 739, 1201, 1283, 1324, 1606, 1684, 1777
NlaIV GGNNCC 5 cut(s) 39, 622, 1167, 1203, 1307
NmeAIII GCCGAG 1 cut(s) 95
NmuCI GTSAC 2 cut(s) 364, 370
NsiI ATGCAT 1 cut(s) 1887
NspI RCATGY 4 cut(s) 505, 922, 947, 2081
OliI CACNNNNGTG 1 cut(s) 591
PciI ACATGT 3 cut(s) 501, 918, 943
PciSI GCTCTTC 1 cut(s) 15
PcsI WCGNNNNNNNCGW 2 cut(s) 281, 374
PctI GAATGC 1 cut(s) 1335
PdmI GAANNNNTTC 3 cut(s) 491, 1192, 1946
PfeI GAWTC 9 cut(s) 81, 228, 520, 673, 991, 1031, 1121, 1193, 1613
PkrI GCNGC 7 cut(s) 88, 191, 264, 457, 883, 901, 1861
PleI GAGTC 3 cut(s) 73, 990, 1246
PpsI GAGTC 3 cut(s) 73, 990, 1246
PscI ACATGT 3 cut(s) 501, 918, 943
PsiI TTATAA 2 cut(s) 417, 824
Psp124BI GAGCTC 3 cut(s) 132, 865, 1497
Psp6I CCWGG 1 cut(s) 1736
PspFI CCCAGC 1 cut(s) 1555
PspGI CCWGG 1 cut(s) 1736
PspN4I GGNNCC 5 cut(s) 39, 622, 1167, 1203, 1307
PstI CTGCAG 2 cut(s) 303, 611
PstNI CAGNNNCTG 1 cut(s) 2045
PsuI RGATCY 2 cut(s) 1201, 1606
PvuII CAGCTG 1 cut(s) 1859
RsaI GTAC 2 cut(s) 1700, 2174
RsaNI GTAC 2 cut(s) 1699, 2173
RseI CAYNNNNRTG 5 cut(s) 591, 917, 948, 1415, 1533
SacI GAGCTC 3 cut(s) 132, 865, 1497
SapI GCTCTTC 1 cut(s) 15
SaqAI TTAA 6 cut(s) 168, 566, 1533, 1547, 1671, 2109
SatI GCNGC 7 cut(s) 87, 190, 263, 456, 882, 900, 1860
Sau3AI GATC 8 cut(s) 378, 739, 1201, 1283, 1324, 1606, 1684, 1777
ScaI AGTACT 1 cut(s) 1700
SchI GAGTC 3 cut(s) 74, 991, 1247
ScrFI CCNGG 2 cut(s) 511, 1738
SduI GDGCHC 6 cut(s) 132, 444, 865, 1497, 2022, 2056
SfaNI GCATC 3 cut(s) 658, 1894, 2180
SfcI CTRYAG 2 cut(s) 299, 607
SgrAI CRCCGGYG 1 cut(s) 89
SmiMI CAYNNNNRTG 5 cut(s) 591, 917, 948, 1415, 1533
SmlI CTYRAG 2 cut(s) 1483, 1670
SmoI CTYRAG 2 cut(s) 1483, 1670
SpeI ACTAGT 1 cut(s) 2026
SsiI CCGC 8 cut(s) 55, 87, 189, 262, 703, 882, 1562, 1988
SspMI CTAG 8 cut(s) 59, 866, 1113, 1266, 1385, 1691, 2027, 2162
SstI GAGCTC 3 cut(s) 132, 865, 1497
StyD4I CCNGG 2 cut(s) 509, 1736
StyI CCWWGG 1 cut(s) 444
TaaI ACNGT 4 cut(s) 255, 370, 1020, 1081
TaiI ACGT 5 cut(s) 174, 275, 353, 1431, 1519
TaqI TCGA 7 cut(s) 135, 147, 275, 314, 325, 1519, 2149
TatI WGTACW 2 cut(s) 1698, 2172
TauI GCSGC 4 cut(s) 89, 192, 265, 884
TfiI GAWTC 9 cut(s) 81, 228, 520, 673, 991, 1031, 1121, 1193, 1613
Tru1I TTAA 6 cut(s) 168, 566, 1533, 1547, 1671, 2109
Tru9I TTAA 6 cut(s) 168, 566, 1533, 1547, 1671, 2109
TscAI CASTG 6 cut(s) 853, 1029, 1176, 1406, 1593, 1624
TseFI GTSAC 2 cut(s) 364, 370
TseI GCWGC 3 cut(s) 455, 899, 1859
Tsp45I GTSAC 2 cut(s) 364, 370
TspDTI ATGAA 9 cut(s) 572, 728, 901, 1083, 1185, 1644, 1653, 1670, 1974
TspGWI ACGGA 5 cut(s) 50, 58, 240, 732, 2018
TspRI CASTG 6 cut(s) 853, 1029, 1176, 1406, 1593, 1624
Vha464I CTTAAG 1 cut(s) 1670
XapI RAATTY 5 cut(s) 48, 1657, 1729, 1790, 2119
XbaI TCTAGA 1 cut(s) 865
XceI RCATGY 4 cut(s) 505, 922, 947, 2081
XcmI CCANNNNNNNNNTGG 1 cut(s) 313
XmnI GAANNNNTTC 3 cut(s) 491, 1192, 1946
XspI CTAG 8 cut(s) 59, 866, 1113, 1266, 1385, 1691, 2027, 2162
ZraI GACGTC 2 cut(s) 273, 1429
ZrmI AGTACT 1 cut(s) 1700
Zsp2I ATGCAT 1 cut(s) 1887
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.