Rh3BG275700

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Reverse (-)
26995540 .. 26998150
2611 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG275700.1

Sequence Viewer

Length: 378 bp
ATGTCTACACCACTCTCTAGTGCAAATGACTTGCAGTCGCAACTCTATGGAATCCTGAAAAAATTGGTGGTGTTGGTGCCCCCAGAGAGGGAAACTACTAGTACAAATAGGAGCATGCGTCAGTTCTCTTTCTTTGAAAGGCTGAAAGGGTGGAAAATCGAGGTCAGGCGAAGAAAAAATAATCCGGCGTTCGACTCGTATTTTCACCACGAAAAACTAAAGAAAGTTTTGCGTTCGTATATGGAGGTGGTAGGTTTTATCCTCTATGAGGATACAACGGCTGTGCAATCGGAAAAGAGAAAGACAACATCTTTACCGAAGGAAGAATCTACTAACAAAAGAATCAAGGTCGAGATGAAAGAAAGTGCACGACTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

125

Amino Acids

14.71

Weight (kDa)

9.99

Isoelectric Point (pI)

68.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 76
AccI GTMKAC 1 cut(s) 5
AfaI GTAC 1 cut(s) 103
AfiI CCNNNNNNNGG 3 cut(s) 87, 88, 268
AgsI TTSAA 1 cut(s) 137
AhdI GACNNNNNGTC 1 cut(s) 34
AhlI ACTAGT 1 cut(s) 98
Alw21I GWGCWC 1 cut(s) 370
Alw44I GTGCAC 1 cut(s) 366
ApaLI GTGCAC 1 cut(s) 366
AsuHPI GGTGA 1 cut(s) 197
BaeGI GKGCMC 2 cut(s) 81, 370
BanI GGYRCC 1 cut(s) 76
Bbv12I GWGCWC 1 cut(s) 370
BceAI ACGGC 1 cut(s) 294
BciVI GTATCC 1 cut(s) 265
BcuI ACTAGT 1 cut(s) 98
BfaI CTAG 2 cut(s) 18, 99
BfuI GTATCC 1 cut(s) 265
BmeRI GACNNNNNGTC 1 cut(s) 34
BmiI GGNNCC 1 cut(s) 78
BsaXI ACNNNNNCTCC 2 cut(s) 103, 133
Bsc4I CCNNNNNNNGG 3 cut(s) 87, 88, 268
BseLI CCNNNNNNNGG 3 cut(s) 87, 88, 268
BseSI GKGCMC 2 cut(s) 81, 370
BshNI GGYRCC 1 cut(s) 76
BsiHKAI GWGCWC 1 cut(s) 370
BsiSI CCGG 1 cut(s) 185
BslI CCNNNNNNNGG 3 cut(s) 87, 88, 268
Bsp1286I GDGCHC 2 cut(s) 81, 370
BspLI GGNNCC 1 cut(s) 78
BspT107I GGYRCC 1 cut(s) 76
BstC8I GCNNGC 1 cut(s) 116
BstENI CCTNNNNNAGG 1 cut(s) 266
BstNSI RCATGY 1 cut(s) 118
BstSLI GKGCMC 2 cut(s) 81, 370
BsuI GTATCC 1 cut(s) 265
Cac8I GCNNGC 1 cut(s) 116
CseI GACGC 1 cut(s) 107
Csp6I GTAC 1 cut(s) 102
CviAII CATG 1 cut(s) 115
CviJI RGCY 2 cut(s) 142, 281
CviKI_1 RGCY 2 cut(s) 142, 281
CviQI GTAC 1 cut(s) 102
DriI GACNNNNNGTC 1 cut(s) 34
Eam1105I GACNNNNNGTC 1 cut(s) 34
EcoNI CCTNNNNNAGG 1 cut(s) 266
FaeI CATG 1 cut(s) 118
FaiI YATR 5 cut(s) 48, 116, 240, 242, 267
FatI CATG 1 cut(s) 114
FblI GTMKAC 1 cut(s) 5
FspBI CTAG 2 cut(s) 18, 99
HapII CCGG 1 cut(s) 185
HgaI GACGC 1 cut(s) 107
Hin1II CATG 1 cut(s) 118
HinfI GANTC 4 cut(s) 51, 194, 326, 342
HpaII CCGG 1 cut(s) 185
HphI GGTGA 1 cut(s) 197
Hpy166II GTNNAC 2 cut(s) 6, 368
Hpy188I TCNGA 1 cut(s) 292
Hpy188III TCNNGA 2 cut(s) 55, 352
Hpy8I GTNNAC 2 cut(s) 6, 368
HpyAV CCTTC 1 cut(s) 313
HpyCH4V TGCA 4 cut(s) 23, 34, 286, 368
Hsp92II CATG 1 cut(s) 118
LmnI GCTCC 1 cut(s) 111
LpnPI CCDG 4 cut(s) 68, 96, 151, 198
MaeI CTAG 2 cut(s) 18, 99
MboII GAAGA 2 cut(s) 183, 335
MhlI GDGCHC 2 cut(s) 81, 370
MluCI AATT 1 cut(s) 62
MlyI GAGTC 1 cut(s) 188
MnlI CCTC 5 cut(s) 81, 154, 238, 262, 272
MspI CCGG 1 cut(s) 185
NlaIII CATG 1 cut(s) 118
NlaIV GGNNCC 1 cut(s) 78
NspI RCATGY 1 cut(s) 118
PaeI GCATGC 1 cut(s) 118
PfeI GAWTC 3 cut(s) 51, 326, 342
PleI GAGTC 1 cut(s) 188
PpsI GAGTC 1 cut(s) 188
PspN4I GGNNCC 1 cut(s) 78
RsaI GTAC 1 cut(s) 103
RsaNI GTAC 1 cut(s) 102
SchI GAGTC 1 cut(s) 188
SduI GDGCHC 2 cut(s) 81, 370
SetI ASST 4 cut(s) 165, 249, 256, 351
SpeI ACTAGT 1 cut(s) 98
SphI GCATGC 1 cut(s) 118
Sse9I AATT 1 cut(s) 62
SspMI CTAG 2 cut(s) 18, 99
TaqI TCGA 3 cut(s) 159, 192, 351
TasI AATT 1 cut(s) 62
TatI WGTACW 1 cut(s) 101
TfiI GAWTC 3 cut(s) 51, 326, 342
TspDTI ATGAA 1 cut(s) 371
VneI GTGCAC 1 cut(s) 366
XagI CCTNNNNNAGG 1 cut(s) 266
XceI RCATGY 1 cut(s) 118
XmiI GTMKAC 1 cut(s) 5
XspI CTAG 2 cut(s) 18, 99
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.