WD40 repeats
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 106, 119 |
| AcsI | RAATTY | 1 cut(s) | 15 |
| AfaI | GTAC | 1 cut(s) | 190 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 68 |
| AhlI | ACTAGT | 1 cut(s) | 23 |
| AluBI | AGCT | 2 cut(s) | 50, 182 |
| AluI | AGCT | 2 cut(s) | 50, 182 |
| AlwI | GGATC | 2 cut(s) | 106, 119 |
| AoxI | GGCC | 2 cut(s) | 76, 197 |
| ApoI | RAATTY | 1 cut(s) | 15 |
| AspS9I | GGNCC | 1 cut(s) | 198 |
| AsuNHI | GCTAGC | 1 cut(s) | 178 |
| BamHI | GGATCC | 1 cut(s) | 111 |
| BceAI | ACGGC | 1 cut(s) | 122 |
| BcuI | ACTAGT | 1 cut(s) | 23 |
| BfaI | CTAG | 3 cut(s) | 24, 179, 183 |
| BfmI | CTRYAG | 1 cut(s) | 66 |
| BmgT120I | GGNCC | 1 cut(s) | 198 |
| BmiI | GGNNCC | 2 cut(s) | 113, 200 |
| BmrI | ACTGGG | 1 cut(s) | 196 |
| BmtI | GCTAGC | 1 cut(s) | 182 |
| BmuI | ACTGGG | 1 cut(s) | 196 |
| BsaJI | CCNNGG | 1 cut(s) | 138 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 68 |
| Bse1I | ACTGG | 1 cut(s) | 202 |
| BseDI | CCNNGG | 1 cut(s) | 138 |
| BseGI | GGATG | 1 cut(s) | 58 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 68 |
| BseNI | ACTGG | 1 cut(s) | 202 |
| BsgI | GTGCAG | 1 cut(s) | 48 |
| BshFI | GGCC | 2 cut(s) | 78, 199 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 68 |
| BsnI | GGCC | 2 cut(s) | 78, 199 |
| Bsp143I | GATC | 1 cut(s) | 111 |
| BspANI | GGCC | 2 cut(s) | 78, 199 |
| BspLI | GGNNCC | 2 cut(s) | 113, 200 |
| BspOI | GCTAGC | 1 cut(s) | 182 |
| BspPI | GGATC | 2 cut(s) | 106, 119 |
| BsrI | ACTGG | 1 cut(s) | 202 |
| BssECI | CCNNGG | 1 cut(s) | 138 |
| BssMI | GATC | 1 cut(s) | 111 |
| BstC8I | GCNNGC | 1 cut(s) | 180 |
| BstDEI | CTNAG | 1 cut(s) | 93 |
| BstDSI | CCRYGG | 1 cut(s) | 138 |
| BstF5I | GGATG | 1 cut(s) | 58 |
| BstKTI | GATC | 1 cut(s) | 114 |
| BstMBI | GATC | 1 cut(s) | 111 |
| BstNSI | RCATGY | 1 cut(s) | 178 |
| BstSFI | CTRYAG | 1 cut(s) | 66 |
| BstX2I | RGATCY | 1 cut(s) | 111 |
| BstYI | RGATCY | 1 cut(s) | 111 |
| BsuRI | GGCC | 2 cut(s) | 78, 199 |
| BtgI | CCRYGG | 1 cut(s) | 138 |
| BtsCI | GGATG | 1 cut(s) | 58 |
| Cac8I | GCNNGC | 1 cut(s) | 180 |
| Cfr13I | GGNCC | 1 cut(s) | 198 |
| Csp6I | GTAC | 1 cut(s) | 189 |
| CviAII | CATG | 2 cut(s) | 134, 175 |
| CviJI | RGCY | 4 cut(s) | 50, 78, 182, 199 |
| CviKI_1 | RGCY | 4 cut(s) | 50, 78, 182, 199 |
| CviQI | GTAC | 1 cut(s) | 189 |
| DdeI | CTNAG | 1 cut(s) | 93 |
| DpnI | GATC | 1 cut(s) | 113 |
| DpnII | GATC | 1 cut(s) | 111 |
| EcoO109I | RGGNCCY | 1 cut(s) | 198 |
| EcoRI | GAATTC | 1 cut(s) | 15 |
| FaeI | CATG | 2 cut(s) | 137, 178 |
| FaiI | YATR | 5 cut(s) | 87, 123, 135, 147, 176 |
| FatI | CATG | 2 cut(s) | 133, 174 |
| FokI | GGATG | 1 cut(s) | 45 |
| FspBI | CTAG | 3 cut(s) | 24, 179, 183 |
| HaeIII | GGCC | 2 cut(s) | 78, 199 |
| Hin1II | CATG | 2 cut(s) | 137, 178 |
| HincII | GTYRAC | 1 cut(s) | 43 |
| HindII | GTYRAC | 1 cut(s) | 43 |
| Hpy166II | GTNNAC | 1 cut(s) | 43 |
| Hpy8I | GTNNAC | 1 cut(s) | 43 |
| HpyAV | CCTTC | 1 cut(s) | 92 |
| HpyCH4IV | ACGT | 1 cut(s) | 45 |
| HpyCH4V | TGCA | 1 cut(s) | 29 |
| HpyF3I | CTNAG | 1 cut(s) | 93 |
| HpySE526I | ACGT | 1 cut(s) | 45 |
| Hsp92II | CATG | 2 cut(s) | 137, 178 |
| Kzo9I | GATC | 1 cut(s) | 111 |
| MaeI | CTAG | 3 cut(s) | 24, 179, 183 |
| MaeII | ACGT | 1 cut(s) | 45 |
| MalI | GATC | 1 cut(s) | 113 |
| MboI | GATC | 1 cut(s) | 111 |
| MboII | GAAGA | 1 cut(s) | 44 |
| MflI | RGATCY | 1 cut(s) | 111 |
| MluCI | AATT | 2 cut(s) | 15, 157 |
| MnlI | CCTC | 5 cut(s) | 31, 65, 73, 125, 179 |
| MseI | TTAA | 2 cut(s) | 107, 165 |
| NdeII | GATC | 1 cut(s) | 111 |
| NheI | GCTAGC | 1 cut(s) | 178 |
| NlaIII | CATG | 2 cut(s) | 137, 178 |
| NlaIV | GGNNCC | 2 cut(s) | 113, 200 |
| NspI | RCATGY | 1 cut(s) | 178 |
| PspN4I | GGNNCC | 2 cut(s) | 113, 200 |
| PspPI | GGNCC | 1 cut(s) | 198 |
| PsuI | RGATCY | 1 cut(s) | 111 |
| RsaI | GTAC | 1 cut(s) | 190 |
| RsaNI | GTAC | 1 cut(s) | 189 |
| SaqAI | TTAA | 2 cut(s) | 107, 165 |
| Sau3AI | GATC | 1 cut(s) | 111 |
| Sau96I | GGNCC | 1 cut(s) | 198 |
| SetI | ASST | 6 cut(s) | 42, 48, 52, 76, 184, 190 |
| SfcI | CTRYAG | 1 cut(s) | 66 |
| SgeI | CNNG | 9 cut(s) | 20, 36, 63, 92, 146, 151, 187, 191, 195 |
| SpeI | ACTAGT | 1 cut(s) | 23 |
| Sse9I | AATT | 2 cut(s) | 15, 157 |
| SspMI | CTAG | 3 cut(s) | 24, 179, 183 |
| TaiI | ACGT | 1 cut(s) | 48 |
| TasI | AATT | 2 cut(s) | 15, 157 |
| Tru1I | TTAA | 2 cut(s) | 107, 165 |
| Tru9I | TTAA | 2 cut(s) | 107, 165 |
| TspDTI | ATGAA | 2 cut(s) | 47, 183 |
| XapI | RAATTY | 1 cut(s) | 15 |
| XceI | RCATGY | 1 cut(s) | 178 |
| XspI | CTAG | 3 cut(s) | 24, 179, 183 |