Rh2BG429800

AT-rich interactive domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
60787072 .. 60791373
4302 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG429800.1

Sequence Viewer

Length: 327 bp
ATGAGTGAAGCTACTGCCAGGATGGTCACAGATACAAGCTGCCGGGATGGTGTTTCTGGGTTGGGTGCTGCTGGGTGGGATATTAGTAACCGAGAGGAGGTTCAAACTCTGACTAACCGCAAAGAGAAGTTCCGTAAATTGCTTGAATCGTATAAGCCGAGTTTTGTATACTTGCAGGGAGAGCAGCTTGAAAATGATGAAGTTGGTTCTTTTGCCTGGAGAGATGCTGATTTGCCAACTGCTGAATCTCATGCTCCTTTCCTTTACTACTTGGGCTCCTTTGCTGGTGGAATTCCGGTGAGCACCAATCGATACTCTTTCACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

108

Amino Acids

12.04

Weight (kDa)

4.91

Isoelectric Point (pI)

30.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 168
AciI CCGC 1 cut(s) 118
AcsI RAATTY 1 cut(s) 291
AfiI CCNNNNNNNGG 1 cut(s) 97
AgsI TTSAA 3 cut(s) 104, 146, 191
AjnI CCWGG 2 cut(s) 17, 215
AluBI AGCT 3 cut(s) 11, 39, 187
AluI AGCT 3 cut(s) 11, 39, 187
Alw21I GWGCWC 1 cut(s) 305
ApeKI GCWGC 3 cut(s) 39, 68, 184
ApoI RAATTY 1 cut(s) 291
AsuC2I CCSGG 1 cut(s) 44
AsuHPI GGTGA 1 cut(s) 310
BanII GRGCYC 1 cut(s) 278
Bbv12I GWGCWC 1 cut(s) 305
BbvI GCAGC 3 cut(s) 26, 55, 196
BccI CCATC 2 cut(s) 16, 41
BciT130I CCWGG 2 cut(s) 19, 217
BcnI CCSGG 1 cut(s) 44
BisI GCNGC 3 cut(s) 40, 69, 185
BlsI GCNGC 3 cut(s) 41, 70, 186
Bme1390I CCNGG 3 cut(s) 19, 44, 217
BmiI GGNNCC 1 cut(s) 277
BmrFI CCNGG 3 cut(s) 19, 44, 217
BmsI GCATC 1 cut(s) 214
BpmI CTGGAG 1 cut(s) 238
BpuMI CCSGG 1 cut(s) 44
Bsa29I ATCGAT 1 cut(s) 310
BsaWI WCCGGW 1 cut(s) 295
BsaXI ACNNNNNCTCC 2 cut(s) 260, 290
Bsc4I CCNNNNNNNGG 1 cut(s) 97
BseBI CCWGG 2 cut(s) 19, 217
BseCI ATCGAT 1 cut(s) 310
BseGI GGATG 2 cut(s) 27, 52
BseLI CCNNNNNNNGG 1 cut(s) 97
BseRI GAGGAG 1 cut(s) 110
BseXI GCAGC 3 cut(s) 26, 55, 196
BseYI CCCAGC 1 cut(s) 71
BshVI ATCGAT 1 cut(s) 310
BsiHKAI GWGCWC 1 cut(s) 305
BsiSI CCGG 2 cut(s) 43, 296
BslI CCNNNNNNNGG 1 cut(s) 97
Bsp1286I GDGCHC 2 cut(s) 278, 305
BspACI CCGC 1 cut(s) 118
BspDI ATCGAT 1 cut(s) 310
BspLI GGNNCC 1 cut(s) 277
BssNAI GTATAC 1 cut(s) 169
Bst1107I GTATAC 1 cut(s) 169
Bst2UI CCWGG 2 cut(s) 19, 217
BstDEI CTNAG 1 cut(s) 324
BstF5I GGATG 2 cut(s) 27, 52
BstMWI GCNNNNNNNGC 1 cut(s) 181
BstNI CCWGG 2 cut(s) 19, 217
BstSCI CCNGG 3 cut(s) 17, 42, 215
BstV1I GCAGC 3 cut(s) 26, 55, 196
BstZ17I GTATAC 1 cut(s) 169
Bsu15I ATCGAT 1 cut(s) 310
BsuTUI ATCGAT 1 cut(s) 310
BtsCI GGATG 2 cut(s) 27, 52
ClaI ATCGAT 1 cut(s) 310
CviAII CATG 1 cut(s) 251
CviJI RGCY 5 cut(s) 11, 39, 157, 187, 276
CviKI_1 RGCY 5 cut(s) 11, 39, 157, 187, 276
DdeI CTNAG 1 cut(s) 324
Eco24I GRGCYC 1 cut(s) 278
EcoRI GAATTC 1 cut(s) 291
EcoRII CCWGG 2 cut(s) 17, 215
EcoT38I GRGCYC 1 cut(s) 278
FaeI CATG 1 cut(s) 254
FaiI YATR 3 cut(s) 153, 169, 252
FatI CATG 1 cut(s) 250
FblI GTMKAC 1 cut(s) 168
Fnu4HI GCNGC 3 cut(s) 40, 69, 185
FokI GGATG 2 cut(s) 34, 59
FriOI GRGCYC 1 cut(s) 278
Fsp4HI GCNGC 3 cut(s) 40, 69, 185
GluI GCNGC 3 cut(s) 40, 69, 185
GsaI CCCAGC 1 cut(s) 75
GsuI CTGGAG 1 cut(s) 238
HapII CCGG 2 cut(s) 43, 296
Hin1II CATG 1 cut(s) 254
HinfI GANTC 2 cut(s) 146, 245
HpaII CCGG 2 cut(s) 43, 296
HphI GGTGA 1 cut(s) 310
Hpy166II GTNNAC 1 cut(s) 169
Hpy188I TCNGA 1 cut(s) 111
Hpy8I GTNNAC 1 cut(s) 169
HpyCH4V TGCA 1 cut(s) 175
HpyF10VI GCNNNNNNNGC 1 cut(s) 181
HpyF3I CTNAG 1 cut(s) 324
Hsp92II CATG 1 cut(s) 254
LmnI GCTCC 2 cut(s) 259, 281
Lsp1109I GCAGC 3 cut(s) 26, 55, 196
LweI GCATC 1 cut(s) 214
MaeIII GTNAC 2 cut(s) 25, 86
MhlI GDGCHC 2 cut(s) 278, 305
MluCI AATT 2 cut(s) 137, 291
MnlI CCTC 2 cut(s) 88, 91
MspI CCGG 2 cut(s) 43, 296
MspR9I CCNGG 3 cut(s) 19, 44, 217
MvaI CCWGG 2 cut(s) 19, 217
MwoI GCNNNNNNNGC 1 cut(s) 181
NciI CCSGG 1 cut(s) 44
NlaIII CATG 1 cut(s) 254
NlaIV GGNNCC 1 cut(s) 277
NmeAIII GCCGAG 1 cut(s) 183
NmuCI GTSAC 1 cut(s) 25
PcsI WCGNNNNNNNCGW 1 cut(s) 155
PfeI GAWTC 2 cut(s) 146, 245
PkrI GCNGC 3 cut(s) 41, 70, 186
Psp6I CCWGG 2 cut(s) 17, 215
PspFI CCCAGC 1 cut(s) 71
PspGI CCWGG 2 cut(s) 17, 215
PspN4I GGNNCC 1 cut(s) 277
SatI GCNGC 3 cut(s) 40, 69, 185
ScrFI CCNGG 3 cut(s) 19, 44, 217
SduI GDGCHC 2 cut(s) 278, 305
SetI ASST 4 cut(s) 13, 41, 102, 189
SfaNI GCATC 1 cut(s) 214
Sse9I AATT 2 cut(s) 137, 291
SsiI CCGC 1 cut(s) 118
StyD4I CCNGG 3 cut(s) 17, 42, 215
TaqI TCGA 1 cut(s) 310
TasI AATT 2 cut(s) 137, 291
TfiI GAWTC 2 cut(s) 146, 245
TseFI GTSAC 1 cut(s) 25
TseI GCWGC 3 cut(s) 39, 68, 184
Tsp45I GTSAC 1 cut(s) 25
TspDTI ATGAA 1 cut(s) 213
TspGWI ACGGA 1 cut(s) 122
XapI RAATTY 1 cut(s) 291
XmiI GTMKAC 1 cut(s) 168
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.