Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000311

Physical Location & Seq

Genomic Coordinates Forward (+)

989198 .. 991020

Gene Structure 1823 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G03890.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1356 bp

ATGCATAAGCTTTTGTTTTCTCTTCTCTCCGTCGTCTCACTCTCATTTCTCCTCTTCTTCCATGGCGCCGAGGCACGCCAGCGAGAGGCGCCGTTTCCAAACGCCTGCCATTTCAGCCAAATCAACAGCCTCGCGCCCGCTCAGGCGACGAAGTTCGAAGCCGGTCAGATGGAAGTATGGGACCACATGAGCCCTGAGCTCCGATGCGCCGGTGTAACGGTGGCTCGCATCACCCTTCAGCCCAATTCCATTTTCTTGCCCGCTTTCTTTAGCCCACCTGCCCTTGCTTACGTTGTCCAAGGAGAAGGAGTTATGGGGACGATTGCTTCTGGTTGTCCTGAGACTTTTGCAGAAGTTGAAGGATCATCAGGAAGAGGAGGAGGAGGAGACCCGGGTCGACGTTTTGAGGACATGCACCAGAAGTTGGAGAATTTCCGGCGAGGGGATGTGTTTGCTTCGCTTGCCGGAGTTTCACAGTGGTGGTACAACCGCGGTGATTCCGATGCCGTCATTGTCATTGTTCTTGATGTCACCAACAGAGAAAACCAGCTTGACCAAGTCCCTAGGATGTTCCAACTAGCCGGGAGCAGAACGCAAGAAGAAGAACAACCATTAACGTGGCCATCAGGCAACAACGCTTTCAGCGGTTTCGACCCAAACATAATCGCGGAAGCATTCAAAATCAACATCGAGACAGCTAAGCAACTACAAAACCAGAAGGACAACAGAGGAAACATAATCCGAGCAAATGGTCCTCTCCATTTCGTCATCCCACCGCCTCGTGAATGGCAGCAAGATGGCATTGCTAATGGCATCGAAGAGACTTATTGCACGGCTAAGATTCATGAGAATATCGATGATCCAGAACGGTCTGACCATTTTAGCACACGAGCCGGAAGAATCAGCACTCTTAACAGCCTTAATCTCCCTGTTCTACGTCTAGTCAGACTTAACGCCCTTAGAGGTTATCTCTACAGCGGAGGAATGGTGTTGCCACAATGGACGGCAAACGCGCACACGGTGCTATACGTCACAGGAGGTCAAGCCAAGATACAAGTGGTGGACGACAATGGTCAGTCGGTGTTCAATGAGCAAGTGGGACAAGGCCAAATCATTGTGATTCCACAAGGCTTTGCAGTTTCAAAAACGGCTGGTGAAACGGGTTTCGAGTGGATATCATTCAAGACAAACGATAACGCTTACATTAACACACTGAGCGGCCAAACATCGTACTTGAGAGCAGTTCCAGTGGATGTGATCAAAGCGTCATATGGAGTGAACGAGGAAGAAGCCAAGAGGATCAAGTTTAGTCAGCAAGAGACCATGTTGTCTATGACACCAAGCTCTTCTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009791 GO:0009987 GO:0010033 GO:0010154 GO:0010431 GO:0021700 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033095 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045735 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071695 GO:0097305 GO:0097306 GO:0097708 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

451

Amino Acids

49.67

Weight (kDa)

5.47

Isoelectric Point (pI)

44.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	42 - 198	2.4e-27	Cupin
Cupin_1	PF00190	284 - 432	2.2e-38	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03880 AT1G03890 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT5G44120 AT5G44120 AT5G44120
fragaria_vesca	FvH4_2g21390 FvH4_2g21390 FvH4_2g21400 FvH4_2g21410 FvH4_2g21410 FvH4_2g21410 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21440 FvH4_3g19080
malus_domestica	MD01G1024700.v1.1 MD05G1196800.v1.1 MD05G1196900.v1.1 MD17G1078200.v1.1
prunus_persica	Prupe.8G223300_v2.0.a1 Prupe.8G223400_v2.0.a1 Prupe.8G223400_v2.0.a1
pyrus_communis	pycom05g18380 pycom05g18390
rosa_chinensis	RchiOBHm_Chr6g0287991 RchiOBHm_Chr6g0288001 RchiOBHm_Chr6g0288021 RchiOBHm_Chr6g0288031 RchiOBHm_Chr6g0288041 RchiOBHm_Chr6g0288051 RchiOBHm_Chr6g0288071
rosa_laevigata	RLG00000012441 RLG00000012443 RLG00000012444 RLG00000012446 RLG00000012447 RLG00000012448
rosa_multiflora	Rmu_co8147412.1_g000001 Rmu_co8487931.1_g000001 Rmu_co8505755.1_g000001 Rmu_sc0001117.1_g000003 Rmu_sc0001117.1_g000005 Rmu_sc0001117.1_g000011 Rmu_sc0001117.1_g000013 Rmu_sc0005266.1_g000010 Rmu_sc0010960.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252330 Rroxscaffold_7G00180530 Rroxscaffold_7G00180550 Rroxscaffold_7G00180560 Rroxscaffold_7G00180570 Rroxscaffold_7G00180580 Rroxscaffold_7G00180590
rosa_rugosa	Rorug06G0041100 Rorug06G0041200 Rorug06G0041200 Rorug06G0041400 Rorug06G0193700 Rorug06G0193700 Rorug06G0193700 Rorug06G0193800 Rorug06G0193800 Rorug06G0193900 Rorug06G0194000 Rorug06G0194100
rosa_samantha	Rh6AG303300 Rh6AG303400 Rh6AG303500 Rh6AG303700 Rh6AG303800 Rh6AG303900 Rh6AG304100 Rh6AG304200 Rh6BG309500 Rh6BG309600 Rh6BG309700 Rh6BG309900 Rh6BG310000 Rh6BG310100 Rh6BG310200 Rh6CG299600 Rh6CG299800 Rh6CG300000 Rh6CG300200 Rh6CG300300 Rh6CG317100 Rh6CG317300 Rh6CG317500 Rh6CG317700 Rh6CG317800 Rh6CG318200 Rh6DG302000 Rh6DG302100 Rh6DG302300 Rh6DG302500 Rh6DG302600 Rh6DG302700 Rh6DG303100
rosa_wichuraiana	Rw6G026230 Rw6G026240 Rw6G026260 Rw6G026280 Rw6G026300 Rw6G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	286
AasI	GACNNNNNNGTC	1 cut(s)	1327
Acc36I	ACCTGC	1 cut(s)	286
AccB1I	GGYRCC	2 cut(s)	65, 88
AccB7I	CCANNNNNTGG	1 cut(s)	424
AccBSI	CCGCTC	2 cut(s)	140, 1218
AccI	GTMKAC	1 cut(s)	397
AccII	CGCG	4 cut(s)	134, 492, 668, 1013
AciI	CCGC	9 cut(s)	138, 261, 490, 492, 645, 668, 776, 978, 1218
AclWI	GGATC	3 cut(s)	370, 854, 1307
AcoI	YGGCCR	2 cut(s)	620, 1219
AcsI	RAATTY	1 cut(s)	430
AcuI	CTGAAG	1 cut(s)	221
AcyI	GRCGYC	2 cut(s)	66, 89
AdeI	CACNNNGTG	1 cut(s)	1021
AfaI	GTAC	2 cut(s)	485, 1232
AfiI	CCNNNNNNNGG	3 cut(s)	85, 424, 442
AgsI	TTSAA	5 cut(s)	359, 679, 1087, 1143, 1183
AjuI	GAANNNNNNNTTGG	3 cut(s)	236, 268, 1333
AleI	CACNNNNGTG	1 cut(s)	478
AluBI	AGCT	5 cut(s)	10, 199, 550, 698, 1344
AluI	AGCT	5 cut(s)	10, 199, 550, 698, 1344
Alw21I	GWGCWC	1 cut(s)	201
Alw26I	GTCTC	6 cut(s)	40, 335, 381, 686, 815, 1313
AlwI	GGATC	3 cut(s)	370, 854, 1307
Ama87I	CYCGRG	1 cut(s)	391
AoxI	GGCC	3 cut(s)	620, 1105, 1219
ApeKI	GCWGC	1 cut(s)	790
ApoI	RAATTY	1 cut(s)	430
AspA2I	CCTAGG	1 cut(s)	563
AspLEI	GCGC	5 cut(s)	68, 91, 136, 209, 1015
AspS9I	GGNCC	2 cut(s)	181, 752
AsuC2I	CCSGG	3 cut(s)	392, 393, 583
AsuHPI	GGTGA	4 cut(s)	223, 506, 523, 1166
AsuII	TTCGAA	1 cut(s)	156
AvaI	CYCGRG	1 cut(s)	391
AvaII	GGWCC	2 cut(s)	181, 752
AvrII	CCTAGG	1 cut(s)	563
BalI	TGGCCA	1 cut(s)	622
BanI	GGYRCC	2 cut(s)	65, 88
BanII	GRGCYC	2 cut(s)	194, 201
BauI	CACGAG	2 cut(s)	780, 888
Bbv12I	GWGCWC	1 cut(s)	201
BbvI	GCAGC	1 cut(s)	802
BccI	CCATC	3 cut(s)	163, 631, 791
BceAI	ACGGC	5 cut(s)	76, 491, 849, 1020, 1164
BclI	TGATCA	1 cut(s)	1257
BcnI	CCSGG	3 cut(s)	392, 393, 583
BcoDI	GTCTC	6 cut(s)	40, 335, 381, 686, 815, 1313
BfaI	CTAG	3 cut(s)	564, 578, 941
BfmI	CTRYAG	1 cut(s)	973
BfoI	RGCGCY	2 cut(s)	69, 92
BfuAI	ACCTGC	1 cut(s)	286
BisI	GCNGC	2 cut(s)	791, 1219
BlnI	CCTAGG	1 cut(s)	563
BlpI	GCTNAGC	1 cut(s)	699
BlsI	GCNGC	2 cut(s)	792, 1220
Bme1390I	CCNGG	3 cut(s)	392, 393, 583
Bme18I	GGWCC	2 cut(s)	181, 752
BmeT110I	CYCGRG	1 cut(s)	391
BmgT120I	GGNCC	2 cut(s)	181, 752
BmiI	GGNNCC	3 cut(s)	67, 90, 182
BmrFI	CCNGG	3 cut(s)	392, 393, 583
BmsI	GCATC	4 cut(s)	194, 237, 493, 822
BoxI	GACNNNNGTC	2 cut(s)	393, 1071
BplI	GAGNNNNNCTC	2 cut(s)	954, 986
Bpu10I	CCTNAGC	2 cut(s)	141, 195
Bpu1102I	GCTNAGC	1 cut(s)	699
Bpu14I	TTCGAA	1 cut(s)	156
BpuEI	CTTGAG	1 cut(s)	1255
BpuMI	CCSGG	3 cut(s)	392, 393, 583
Bsa29I	ATCGAT	1 cut(s)	855
BsaHI	GRCGYC	2 cut(s)	66, 89
BsaI	GGTCTC	2 cut(s)	381, 1313
BsaJI	CCNNGG	6 cut(s)	61, 69, 298, 391, 490, 563
BsaXI	ACNNNNNCTCC	4 cut(s)	294, 324, 972, 1002
Bsc4I	CCNNNNNNNGG	3 cut(s)	85, 424, 442
Bse118I	RCCGGY	2 cut(s)	161, 209
Bse1I	ACTGG	1 cut(s)	1247
Bse3DI	GCAATG	1 cut(s)	801
BseCI	ATCGAT	1 cut(s)	855
BseDI	CCNNGG	6 cut(s)	61, 69, 298, 391, 490, 563
BseGI	GGATG	4 cut(s)	451, 573, 768, 1258
BseLI	CCNNNNNNNGG	3 cut(s)	85, 424, 442
BseMI	GCAATG	1 cut(s)	801
BseMII	CTCAG	4 cut(s)	155, 186, 330, 1205
BseNI	ACTGG	1 cut(s)	1247
BseRI	GAGGAG	5 cut(s)	41, 390, 393, 396, 399
BseXI	GCAGC	1 cut(s)	802
Bsh1236I	CGCG	4 cut(s)	134, 492, 668, 1013
BshFI	GGCC	3 cut(s)	622, 1107, 1221
BshNI	GGYRCC	2 cut(s)	65, 88
BshVI	ATCGAT	1 cut(s)	855
BsiHKAI	GWGCWC	1 cut(s)	201
BsiHKCI	CYCGRG	1 cut(s)	391
BsiSI	CCGG	7 cut(s)	162, 210, 392, 436, 465, 582, 894
BslFI	GGGAC	4 cut(s)	194, 331, 545, 1113
BslI	CCNNNNNNNGG	3 cut(s)	85, 424, 442
BsmAI	GTCTC	6 cut(s)	40, 335, 381, 686, 815, 1313
BsmBI	CGTCTC	1 cut(s)	40
BsmFI	GGGAC	4 cut(s)	194, 331, 545, 1113
BsmI	GAATGC	1 cut(s)	674
BsnI	GGCC	3 cut(s)	622, 1107, 1221
Bso31I	GGTCTC	2 cut(s)	381, 1313
BsoBI	CYCGRG	1 cut(s)	391
Bsp119I	TTCGAA	1 cut(s)	156
Bsp1286I	GDGCHC	2 cut(s)	194, 201
Bsp143I	GATC	4 cut(s)	362, 859, 1257, 1299
Bsp1720I	GCTNAGC	1 cut(s)	699
Bsp19I	CCATGG	1 cut(s)	61
BspACI	CCGC	9 cut(s)	138, 261, 490, 492, 645, 668, 776, 978, 1218
BspANI	GGCC	3 cut(s)	622, 1107, 1221
BspCNI	CTCAG	4 cut(s)	154, 187, 331, 1206
BspDI	ATCGAT	1 cut(s)	855
BspFNI	CGCG	4 cut(s)	134, 492, 668, 1013
BspHI	TCATGA	1 cut(s)	844
BspLI	GGNNCC	3 cut(s)	67, 90, 182
BspMI	ACCTGC	1 cut(s)	286
BspPI	GGATC	3 cut(s)	370, 854, 1307
BspQI	GCTCTTC	1 cut(s)	1351
BspT104I	TTCGAA	1 cut(s)	156
BspT107I	GGYRCC	2 cut(s)	65, 88
BspTNI	GGTCTC	2 cut(s)	381, 1313
BsrBI	CCGCTC	2 cut(s)	140, 1218
BsrDI	GCAATG	1 cut(s)	801
BsrFI	RCCGGY	2 cut(s)	161, 209
BsrI	ACTGG	1 cut(s)	1247
BssAI	RCCGGY	2 cut(s)	161, 209
BssECI	CCNNGG	6 cut(s)	61, 69, 298, 391, 490, 563
BssMI	GATC	4 cut(s)	362, 859, 1257, 1299
BssNI	GRCGYC	2 cut(s)	66, 89
BssSI	CACGAG	2 cut(s)	780, 888
BssT1I	CCWWGG	3 cut(s)	61, 298, 563
Bst2BI	CACGAG	2 cut(s)	780, 888
Bst4CI	ACNGT	4 cut(s)	220, 477, 870, 1021
Bst6I	CTCTTC	5 cut(s)	27, 59, 367, 813, 1351
BstACI	GRCGYC	2 cut(s)	66, 89
BstAPI	GCANNNNNTGC	1 cut(s)	1021
BstBI	TTCGAA	1 cut(s)	156
BstC8I	GCNNGC	7 cut(s)	76, 80, 106, 138, 226, 261, 462
BstDEI	CTNAG	7 cut(s)	141, 195, 339, 699, 837, 959, 1214
BstDSI	CCRYGG	2 cut(s)	61, 490
BstF5I	GGATG	4 cut(s)	451, 573, 768, 1258
BstFNI	CGCG	4 cut(s)	134, 492, 668, 1013
BstH2I	RGCGCY	2 cut(s)	69, 92
BstHHI	GCGC	5 cut(s)	68, 91, 136, 209, 1015
BstKTI	GATC	4 cut(s)	365, 862, 1260, 1302
BstMAI	GTCTC	6 cut(s)	40, 335, 381, 686, 815, 1313
BstMBI	GATC	4 cut(s)	362, 859, 1257, 1299
BstMWI	GCNNNNNNNGC	4 cut(s)	88, 114, 461, 1021
BstNSI	RCATGY	1 cut(s)	415
BstPAI	GACNNNNGTC	2 cut(s)	393, 1071
BstSCI	CCNGG	3 cut(s)	390, 391, 581
BstSFI	CTRYAG	1 cut(s)	973
BstUI	CGCG	4 cut(s)	134, 492, 668, 1013
BstV1I	GCAGC	1 cut(s)	802
BstXI	CCANNNNNNTGG	1 cut(s)	618
Bsu15I	ATCGAT	1 cut(s)	855
BsuRI	GGCC	3 cut(s)	622, 1107, 1221
BsuTUI	ATCGAT	1 cut(s)	855
BtgI	CCRYGG	2 cut(s)	61, 490
BtsCI	GGATG	4 cut(s)	451, 573, 768, 1258
BtsIMutI	CAGTG	3 cut(s)	482, 1211, 1254
BveI	ACCTGC	1 cut(s)	286
Cac8I	GCNNGC	7 cut(s)	76, 80, 106, 138, 226, 261, 462
CciI	TCATGA	1 cut(s)	844
CfoI	GCGC	5 cut(s)	68, 91, 136, 209, 1015
Cfr10I	RCCGGY	2 cut(s)	161, 209
Cfr13I	GGNCC	2 cut(s)	181, 752
Cfr42I	CCGCGG	1 cut(s)	493
Cfr9I	CCCGGG	1 cut(s)	391
ClaI	ATCGAT	1 cut(s)	855
CseI	GACGC	1 cut(s)	1254
Csp6I	GTAC	2 cut(s)	484, 1231
CviAII	CATG	5 cut(s)	62, 187, 412, 845, 1324
CviQI	GTAC	2 cut(s)	484, 1231
DdeI	CTNAG	7 cut(s)	141, 195, 339, 699, 837, 959, 1214
DinI	GGCGCC	2 cut(s)	67, 90
DpnI	GATC	4 cut(s)	364, 861, 1259, 1301
DpnII	GATC	4 cut(s)	362, 859, 1257, 1299
DraIII	CACNNNGTG	1 cut(s)	1021
DrdI	GACNNNNNNGTC	1 cut(s)	1327
DseDI	GACNNNNNNGTC	1 cut(s)	1327
EaeI	YGGCCR	2 cut(s)	620, 1219
Eam1104I	CTCTTC	5 cut(s)	27, 59, 367, 813, 1351
EarI	CTCTTC	5 cut(s)	27, 59, 367, 813, 1351
Ecl136II	GAGCTC	1 cut(s)	199
Eco130I	CCWWGG	3 cut(s)	61, 298, 563
Eco24I	GRGCYC	2 cut(s)	194, 201
Eco31I	GGTCTC	2 cut(s)	381, 1313
Eco32I	GATATC	1 cut(s)	1176
Eco47I	GGWCC	2 cut(s)	181, 752
Eco53kI	GAGCTC	1 cut(s)	199
Eco57I	CTGAAG	1 cut(s)	221
Eco88I	CYCGRG	1 cut(s)	391
EcoICRI	GAGCTC	1 cut(s)	199
EcoRV	GATATC	1 cut(s)	1176
EcoT14I	CCWWGG	3 cut(s)	61, 298, 563
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	2 cut(s)	194, 201
EgeI	GGCGCC	2 cut(s)	67, 90
EheI	GGCGCC	2 cut(s)	67, 90
ErhI	CCWWGG	3 cut(s)	61, 298, 563
Esp3I	CGTCTC	1 cut(s)	40
FaeI	CATG	5 cut(s)	65, 190, 415, 848, 1327
FalI	AAGNNNNNCTT	1 cut(s)	1333
FaqI	GGGAC	4 cut(s)	194, 331, 545, 1113
FatI	CATG	5 cut(s)	61, 186, 411, 844, 1323
FauI	CCCGC	2 cut(s)	145, 268
FauNDI	CATATG	1 cut(s)	1270
FbaI	TGATCA	1 cut(s)	1257
FblI	GTMKAC	1 cut(s)	397
Fnu4HI	GCNGC	2 cut(s)	791, 1219
FokI	GGATG	4 cut(s)	458, 580, 755, 1265
FriOI	GRGCYC	2 cut(s)	194, 201
Fsp4HI	GCNGC	2 cut(s)	791, 1219
FspBI	CTAG	3 cut(s)	564, 578, 941
GlaI	GCGC	5 cut(s)	67, 90, 135, 208, 1014
GluI	GCNGC	2 cut(s)	791, 1219
HaeII	RGCGCY	2 cut(s)	69, 92
HaeIII	GGCC	3 cut(s)	622, 1107, 1221
HapII	CCGG	7 cut(s)	162, 210, 392, 436, 465, 582, 894
HgaI	GACGC	1 cut(s)	1254
HhaI	GCGC	5 cut(s)	68, 91, 136, 209, 1015
Hin1I	GRCGYC	2 cut(s)	66, 89
Hin1II	CATG	5 cut(s)	65, 190, 415, 848, 1327
Hin6I	GCGC	5 cut(s)	66, 89, 134, 207, 1013
HinP1I	GCGC	5 cut(s)	66, 89, 134, 207, 1013
HincII	GTYRAC	1 cut(s)	398
HindII	GTYRAC	1 cut(s)	398
HindIII	AAGCTT	1 cut(s)	8
HinfI	GANTC	4 cut(s)	497, 841, 900, 1120
HpaII	CCGG	7 cut(s)	162, 210, 392, 436, 465, 582, 894
HphI	GGTGA	4 cut(s)	223, 506, 523, 1166
Hpy166II	GTNNAC	3 cut(s)	398, 1063, 1279
Hpy188I	TCNGA	6 cut(s)	168, 203, 502, 743, 874, 947
Hpy188III	TCNNGA	8 cut(s)	338, 369, 524, 691, 782, 845, 863, 1183
Hpy8I	GTNNAC	3 cut(s)	398, 1063, 1279
Hpy99I	CGWCG	3 cut(s)	35, 151, 402
HpyAV	CCTTC	4 cut(s)	245, 299, 353, 712
HpyCH4III	ACNGT	4 cut(s)	220, 477, 870, 1021
HpyCH4IV	ACGT	5 cut(s)	291, 400, 617, 937, 1029
HpyCH4V	TGCA	5 cut(s)	4, 350, 415, 831, 1136
HpyF10VI	GCNNNNNNNGC	4 cut(s)	88, 114, 461, 1021
HpyF3I	CTNAG	7 cut(s)	141, 195, 339, 699, 837, 959, 1214
HpySE526I	ACGT	5 cut(s)	291, 400, 617, 937, 1029
Hsp92I	GRCGYC	2 cut(s)	66, 89
Hsp92II	CATG	5 cut(s)	65, 190, 415, 848, 1327
HspAI	GCGC	5 cut(s)	66, 89, 134, 207, 1013
KasI	GGCGCC	2 cut(s)	65, 88
Ksp22I	TGATCA	1 cut(s)	1257
KspI	CCGCGG	1 cut(s)	493
Kzo9I	GATC	4 cut(s)	362, 859, 1257, 1299
LguI	GCTCTTC	1 cut(s)	1351
LmnI	GCTCC	2 cut(s)	204, 585
Lsp1109I	GCAGC	1 cut(s)	802
LweI	GCATC	4 cut(s)	194, 237, 493, 822
MaeI	CTAG	3 cut(s)	564, 578, 941
MaeII	ACGT	5 cut(s)	291, 400, 617, 937, 1029
MaeIII	GTNAC	3 cut(s)	214, 529, 1030
MalI	GATC	4 cut(s)	364, 861, 1259, 1301
MbiI	CCGCTC	2 cut(s)	140, 1218
MboI	GATC	4 cut(s)	362, 859, 1257, 1299
MhlI	GDGCHC	2 cut(s)	194, 201
MlsI	TGGCCA	1 cut(s)	622
MluCI	AATT	2 cut(s)	244, 430
MluNI	TGGCCA	1 cut(s)	622
Mly113I	GGCGCC	2 cut(s)	66, 89
MmeI	TCCRAC	2 cut(s)	405, 598
Mox20I	TGGCCA	1 cut(s)	622
Mph1103I	ATGCAT	1 cut(s)	6
MscI	TGGCCA	1 cut(s)	622
MseI	TTAA	6 cut(s)	614, 912, 921, 951, 1206, 1354
MslI	CAYNNNNRTG	2 cut(s)	478, 616
Msp20I	TGGCCA	1 cut(s)	622
MspA1I	CMGCKG	3 cut(s)	492, 645, 978
MspI	CCGG	7 cut(s)	162, 210, 392, 436, 465, 582, 894
MspR9I	CCNGG	3 cut(s)	392, 393, 583
Mva1269I	GAATGC	1 cut(s)	674
MvnI	CGCG	4 cut(s)	134, 492, 668, 1013
MwoI	GCNNNNNNNGC	4 cut(s)	88, 114, 461, 1021
NarI	GGCGCC	2 cut(s)	66, 89
NciI	CCSGG	3 cut(s)	392, 393, 583
NcoI	CCATGG	1 cut(s)	61
NdeI	CATATG	1 cut(s)	1270
NdeII	GATC	4 cut(s)	362, 859, 1257, 1299
NlaIII	CATG	5 cut(s)	65, 190, 415, 848, 1327
NlaIV	GGNNCC	3 cut(s)	67, 90, 182
NmeAIII	GCCGAG	1 cut(s)	94
NmuCI	GTSAC	2 cut(s)	529, 1030
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	415
NspV	TTCGAA	1 cut(s)	156
OliI	CACNNNNGTG	1 cut(s)	478
PagI	TCATGA	1 cut(s)	844
PaqCI	CACCTGC	1 cut(s)	286
PciSI	GCTCTTC	1 cut(s)	1351
PctI	GAATGC	1 cut(s)	674
PfeI	GAWTC	4 cut(s)	497, 841, 900, 1120
PflFI	GACNNNGTC	1 cut(s)	557
PflMI	CCANNNNNTGG	1 cut(s)	424
PkrI	GCNGC	2 cut(s)	792, 1220
PluTI	GGCGCC	2 cut(s)	69, 92
PshAI	GACNNNNGTC	2 cut(s)	393, 1071
Psp124BI	GAGCTC	1 cut(s)	201
PspN4I	GGNNCC	3 cut(s)	67, 90, 182
PspPI	GGNCC	2 cut(s)	181, 752
PsyI	GACNNNGTC	1 cut(s)	557
RsaI	GTAC	2 cut(s)	485, 1232
RsaNI	GTAC	2 cut(s)	484, 1231
RseI	CAYNNNNRTG	2 cut(s)	478, 616
SacI	GAGCTC	1 cut(s)	201
SacII	CCGCGG	1 cut(s)	493
SalI	GTCGAC	1 cut(s)	396
SapI	GCTCTTC	1 cut(s)	1351
SaqAI	TTAA	6 cut(s)	614, 912, 921, 951, 1206, 1354
SatI	GCNGC	2 cut(s)	791, 1219
Sau3AI	GATC	4 cut(s)	362, 859, 1257, 1299
Sau96I	GGNCC	2 cut(s)	181, 752
ScrFI	CCNGG	3 cut(s)	392, 393, 583
SduI	GDGCHC	2 cut(s)	194, 201
SfaNI	GCATC	4 cut(s)	194, 237, 493, 822
SfcI	CTRYAG	1 cut(s)	973
SfoI	GGCGCC	2 cut(s)	67, 90
Sfr303I	CCGCGG	1 cut(s)	493
SfuI	TTCGAA	1 cut(s)	156
SgrAI	CRCCGGYG	1 cut(s)	209
SgrBI	CCGCGG	1 cut(s)	493
SinI	GGWCC	2 cut(s)	181, 752
SmaI	CCCGGG	1 cut(s)	393
SmiMI	CAYNNNNRTG	2 cut(s)	478, 616
SmlI	CTYRAG	1 cut(s)	1234
SmoI	CTYRAG	1 cut(s)	1234
Sse9I	AATT	2 cut(s)	244, 430
SsiI	CCGC	9 cut(s)	138, 261, 490, 492, 645, 668, 776, 978, 1218
SspDI	GGCGCC	2 cut(s)	65, 88
SspMI	CTAG	3 cut(s)	564, 578, 941
SstI	GAGCTC	1 cut(s)	201
StyD4I	CCNGG	3 cut(s)	390, 391, 581
StyI	CCWWGG	3 cut(s)	61, 298, 563
TaaI	ACNGT	4 cut(s)	220, 477, 870, 1021
TaiI	ACGT	5 cut(s)	294, 403, 620, 940, 1032
TaqI	TCGA	7 cut(s)	156, 397, 651, 690, 816, 855, 1167
TasI	AATT	2 cut(s)	244, 430
TauI	GCSGC	1 cut(s)	1221
TfiI	GAWTC	4 cut(s)	497, 841, 900, 1120
Tru1I	TTAA	6 cut(s)	614, 912, 921, 951, 1206, 1354
Tru9I	TTAA	6 cut(s)	614, 912, 921, 951, 1206, 1354
TscAI	CASTG	3 cut(s)	482, 1218, 1254
TseFI	GTSAC	2 cut(s)	529, 1030
TseI	GCWGC	1 cut(s)	790
Tsp45I	GTSAC	2 cut(s)	529, 1030
TspDTI	ATGAA	1 cut(s)	833
TspGWI	ACGGA	1 cut(s)	19
TspMI	CCCGGG	1 cut(s)	391
TspRI	CASTG	3 cut(s)	482, 1218, 1254
Tth111I	GACNNNGTC	1 cut(s)	557
Van91I	CCANNNNNTGG	1 cut(s)	424
VpaK11BI	GGWCC	2 cut(s)	181, 752
XapI	RAATTY	1 cut(s)	430
XceI	RCATGY	1 cut(s)	415
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1054
XmaI	CCCGGG	1 cut(s)	391
XmaJI	CCTAGG	1 cut(s)	563
XmiI	GTMKAC	1 cut(s)	397
XspI	CTAG	3 cut(s)	564, 578, 941
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.