Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0000311

Physical Location & Seq

Genomic Coordinates Forward (+)

17821681 .. 17826700

Gene Structure 5020 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g21430.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGAGGTGTAAGAATGTGAAATGCTTTTGCCATGCAAAGATAAGAATGGCTTCAGACTATTTACAGATCTGCTTAGCAGCGCGCCAACAATCTCAGTCGAGCCAGCAGAATGAGTGCCAACTTGATCAGATCCAAGCCCGCGAACCTGATAACCGCATTGAGACTGAAGCGGGTAGGATCGAGTCCTGGAACTACAACCAGGACGACTTCCGGTGTGCTGGTGTTGCTGTTCAACGAATCACTGTTGAAAGAAATGGCCTTCACTTGCCTTCTTACACCCACGCACCACAGCTCATATATATTGTCCAAGGAAATGGTTTTCTATCTACTGTATTCCCTGGCTGTCCTGAGTCTTTTGAAGAATCAGAACAATCTGATGAAGAACAACAGGGTCAACAACAATGGCAAGGGCGTCATGGACAGCAAGGCCGTGAACAACAAGAGCAGCAAGACCGTGGACAGCATGGCCGTCATAGACAACAAGGCCAGCAAGGCCAACAGGGACAAGAAAGCTTCGAACAGCTAGACAGACACCAGAAGGTTCGACGCATCAGAGAAGGTGACGTTGTTGCTATTCCTGCCGGAGTCACCTACTGGTCCTACAATGACGGTGATCAACCTCTTGTTGCTGTCAGTCTTCTTGACATCGGCAACAACCAAAACCAGCTTGATCGTAACCCTAGGAGATTCTATCTAGCGGGTAATCCACAAGATGAGTTTAACCAACACGGGCAAAGCCAAAGGCAACGAGGACGGCAAGGACGTGGACAACAAGCGGAAGGCCAAAGTCAATGGGACCAGGACCAGCAACAGCAAGGAGAAAAGAGCAGGCACCAGCAACAGCAAGGAGGAAGGAGCAGGCACCAGCAACAACAACGACAAGGAAACAACAACATCTTTGCAGGCTTCAACACACAGCTCCTCGCTGATGCTTTGAACATTGACCAACAGACTGCCCAGCAGCTTCAGGGACAGAAAGACAACAGACCCCAAATCGTGAGAGTTAGAGGACGTCTCGATTTCATCCAGCCACCAGAGTCACAACAGGAGGAAAGACGAGAACAGGGAATTCAGAGACAACAGGGGCAACAAGGACAGAATGGTTTTGAGGAGACATTCTGCAACTTCAGGATCAAAGAGAATATTGGCAGGCCGTCACGCGCCGATGTCTTCAGTCCCCAAGCCGGTCGCGTCAGCACGCTCAACAGTTTTAAGTTGCCTATTCTCAGGCACCTTGACCTCAGCGCTGAGAGAGGCTTCCTCTACAACAATGCTATCTACAGCCCCCACTGGAACTTGAACGCTCATGAAGTGTACTATGTCATTAGAGGTAGCGCTAGGGTTCAGATTGTGAACAACAACGGCCAGGCCATCTTGGACAACGAGGTCCGCCAGGGCCAGCTCTTCATTGTGCCACAGAACCACGCAGTGTTACAGAAGGCTAGCAACAATGGCTACGAGTACATTGCCTTCAAGACCCAGGACAATGCCAAGATTAACACTCTGGCTGGCCGGACCTCAGTCTTGCGTGCACTCCCGGACGGTGTCCTTGCTAATGCGTACCAGATTGACCGACAACAGGCAAGGAATCTCAAATACAACAGACAGGAAACTGTTGCTTTGAGCTCTTCAAGGTCTTCCGAGTCCCAGAGGGCTATTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009791 GO:0009987 GO:0010033 GO:0010154 GO:0010431 GO:0021700 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033095 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045735 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071695 GO:0097305 GO:0097306 GO:0097708 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

555

Amino Acids

63.45

Weight (kDa)

8.71

Isoelectric Point (pI)

59.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	45 - 236	1.4e-25	Cupin
Cupin_1	PF00190	381 - 528	2.7e-41	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03880 AT1G03890 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT5G44120 AT5G44120 AT5G44120
fragaria_vesca	FvH4_2g21390 FvH4_2g21390 FvH4_2g21400 FvH4_2g21410 FvH4_2g21410 FvH4_2g21410 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21440 FvH4_3g19080
malus_domestica	MD01G1024700.v1.1 MD05G1196800.v1.1 MD05G1196900.v1.1 MD17G1078200.v1.1
prunus_persica	Prupe.8G223300_v2.0.a1 Prupe.8G223400_v2.0.a1 Prupe.8G223400_v2.0.a1
pyrus_communis	pycom05g18380 pycom05g18390
rosa_chinensis	RchiOBHm_Chr6g0287991 RchiOBHm_Chr6g0288001 RchiOBHm_Chr6g0288021 RchiOBHm_Chr6g0288031 RchiOBHm_Chr6g0288041 RchiOBHm_Chr6g0288051 RchiOBHm_Chr6g0288071
rosa_laevigata	RLG00000012441 RLG00000012443 RLG00000012444 RLG00000012446 RLG00000012447 RLG00000012448
rosa_multiflora	Rmu_co8147412.1_g000001 Rmu_co8487931.1_g000001 Rmu_co8505755.1_g000001 Rmu_sc0001117.1_g000003 Rmu_sc0001117.1_g000005 Rmu_sc0001117.1_g000011 Rmu_sc0001117.1_g000013 Rmu_sc0005266.1_g000010 Rmu_sc0010960.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252330 Rroxscaffold_7G00180530 Rroxscaffold_7G00180550 Rroxscaffold_7G00180560 Rroxscaffold_7G00180570 Rroxscaffold_7G00180580 Rroxscaffold_7G00180590
rosa_rugosa	Rorug06G0041100 Rorug06G0041200 Rorug06G0041200 Rorug06G0041400 Rorug06G0193700 Rorug06G0193700 Rorug06G0193700 Rorug06G0193800 Rorug06G0193800 Rorug06G0193900 Rorug06G0194000 Rorug06G0194100
rosa_samantha	Rh6AG303300 Rh6AG303400 Rh6AG303500 Rh6AG303700 Rh6AG303800 Rh6AG303900 Rh6AG304100 Rh6AG304200 Rh6BG309500 Rh6BG309600 Rh6BG309700 Rh6BG309900 Rh6BG310000 Rh6BG310100 Rh6BG310200 Rh6CG299600 Rh6CG299800 Rh6CG300000 Rh6CG300200 Rh6CG300300 Rh6CG317100 Rh6CG317300 Rh6CG317500 Rh6CG317700 Rh6CG317800 Rh6CG318200 Rh6DG302000 Rh6DG302100 Rh6DG302300 Rh6DG302500 Rh6DG302600 Rh6DG302700 Rh6DG303100
rosa_wichuraiana	Rw6G026230 Rw6G026240 Rw6G026260 Rw6G026280 Rw6G026300 Rw6G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1385
AatII	GACGTC	1 cut(s)	1015
AccB1I	GGYRCC	3 cut(s)	831, 861, 1230
AccII	CGCG	4 cut(s)	82, 141, 1161, 1191
AciI	CCGC	6 cut(s)	139, 154, 170, 698, 776, 1390
AclWI	GGATC	3 cut(s)	124, 185, 1139
AcoI	YGGCCR	3 cut(s)	466, 1363, 1510
AcsI	RAATTY	1 cut(s)	1068
AcuI	CTGAAG	5 cut(s)	36, 186, 950, 1111, 1156
AcyI	GRCGYC	2 cut(s)	412, 1012
AdeI	CACNNNGTG	1 cut(s)	1429
AfaI	GTAC	3 cut(s)	1316, 1463, 1562
AfeI	AGCGCT	2 cut(s)	1246, 1336
AfiI	CCNNNNNNNGG	2 cut(s)	1184, 1579
AgsI	TTSAA	8 cut(s)	233, 248, 359, 910, 937, 1300, 1474, 1632
AjiI	CACGTC	1 cut(s)	764
AjnI	CCWGG	7 cut(s)	185, 198, 337, 798, 1365, 1392, 1479
AluBI	AGCT	8 cut(s)	292, 513, 523, 667, 919, 964, 1402, 1626
AluI	AGCT	8 cut(s)	292, 513, 523, 667, 919, 964, 1402, 1626
Alw21I	GWGCWC	2 cut(s)	1534, 1628
Alw26I	GTCTC	4 cut(s)	155, 1019, 1069, 1106
Alw44I	GTGCAC	1 cut(s)	1530
AlwI	GGATC	3 cut(s)	124, 185, 1139
Aor51HI	AGCGCT	2 cut(s)	1246, 1336
ApaLI	GTGCAC	1 cut(s)	1530
ApeKI	GCWGC	3 cut(s)	77, 445, 961
ApoI	RAATTY	1 cut(s)	1068
Asp700I	GAANNNNTTC	1 cut(s)	49
AspA2I	CCTAGG	1 cut(s)	680
AspLEI	GCGC	5 cut(s)	82, 84, 1163, 1247, 1337
AspS9I	GGNCC	6 cut(s)	597, 796, 802, 1387, 1396, 1515
AsuC2I	CCSGG	1 cut(s)	1538
AsuHPI	GGTGA	3 cut(s)	572, 580, 623
AsuII	TTCGAA	1 cut(s)	516
AsuNHI	GCTAGC	1 cut(s)	1442
AvaII	GGWCC	5 cut(s)	597, 796, 802, 1387, 1515
AvrII	CCTAGG	1 cut(s)	680
BaeGI	GKGCMC	1 cut(s)	1534
BanI	GGYRCC	3 cut(s)	831, 861, 1230
BanII	GRGCYC	1 cut(s)	1628
BarI	GAAGNNNNNNTAC	2 cut(s)	1454, 1486
BbsI	GAAGAC	3 cut(s)	629, 1162, 1629
Bbv12I	GWGCWC	2 cut(s)	1534, 1628
BbvCI	CCTCAGC	1 cut(s)	1241
BbvI	GCAGC	3 cut(s)	89, 457, 973
BccI	CCATC	1 cut(s)	1379
BceAI	ACGGC	5 cut(s)	414, 453, 770, 1138, 1378
BcgI	CGANNNNNNTGC	2 cut(s)	1448, 1482
BciT130I	CCWGG	7 cut(s)	187, 200, 339, 800, 1367, 1394, 1481
BclI	TGATCA	2 cut(s)	124, 613
BcnI	CCSGG	1 cut(s)	1538
BcoDI	GTCTC	4 cut(s)	155, 1019, 1069, 1106
BfaI	CTAG	5 cut(s)	524, 681, 695, 1338, 1443
BfmI	CTRYAG	1 cut(s)	1279
BfoI	RGCGCY	2 cut(s)	1248, 1338
BglI	GCCNNNNNGGC	1 cut(s)	492
BglII	AGATCT	1 cut(s)	66
BisI	GCNGC	3 cut(s)	78, 446, 962
BlnI	CCTAGG	1 cut(s)	680
BlpI	GCTNAGC	1 cut(s)	73
BlsI	GCNGC	3 cut(s)	79, 447, 963
Bme1390I	CCNGG	8 cut(s)	187, 200, 339, 800, 1367, 1394, 1481, 1538
Bme18I	GGWCC	5 cut(s)	597, 796, 802, 1387, 1515
BmgBI	CACGTC	1 cut(s)	764
BmgT120I	GGNCC	6 cut(s)	597, 796, 802, 1387, 1396, 1515
BmiI	GGNNCC	4 cut(s)	797, 833, 863, 1232
BmrFI	CCNGG	8 cut(s)	187, 200, 339, 800, 1367, 1394, 1481, 1538
BmsI	GCATC	2 cut(s)	558, 919
BmtI	GCTAGC	1 cut(s)	1446
BoxI	GACNNNNGTC	1 cut(s)	1520
BpiI	GAAGAC	3 cut(s)	629, 1162, 1629
BplI	GAGNNNNNCTC	4 cut(s)	999, 1031, 1245, 1277
Bpu10I	CCTNAGC	1 cut(s)	1241
Bpu1102I	GCTNAGC	1 cut(s)	73
Bpu14I	TTCGAA	1 cut(s)	516
BpuMI	CCSGG	1 cut(s)	1538
BsaHI	GRCGYC	2 cut(s)	412, 1012
BsaJI	CCNNGG	6 cut(s)	307, 337, 454, 680, 1393, 1479
BsaWI	WCCGGW	1 cut(s)	210
Bsc4I	CCNNNNNNNGG	2 cut(s)	1184, 1579
Bse118I	RCCGGY	1 cut(s)	1184
Bse1I	ACTGG	2 cut(s)	599, 1295
Bse3DI	GCAATG	1 cut(s)	1464
BseBI	CCWGG	7 cut(s)	187, 200, 339, 800, 1367, 1394, 1481
BseDI	CCNNGG	6 cut(s)	307, 337, 454, 680, 1393, 1479
BseGI	GGATG	1 cut(s)	1023
BseLI	CCNNNNNNNGG	2 cut(s)	1184, 1579
BseMI	GCAATG	1 cut(s)	1464
BseMII	CTCAG	6 cut(s)	107, 339, 1239, 1240, 1255, 1533
BseNI	ACTGG	2 cut(s)	599, 1295
BsePI	GCGCGC	1 cut(s)	80
BseRI	GAGGAG	2 cut(s)	911, 1124
BseSI	GKGCMC	1 cut(s)	1534
BseXI	GCAGC	3 cut(s)	89, 457, 973
BseYI	CCCAGC	1 cut(s)	957
Bsh1236I	CGCG	4 cut(s)	82, 141, 1161, 1191
Bsh1285I	CGRYCG	1 cut(s)	1189
BshNI	GGYRCC	3 cut(s)	831, 861, 1230
BsiEI	CGRYCG	1 cut(s)	1189
BsiHKAI	GWGCWC	2 cut(s)	1534, 1628
BsiSI	CCGG	5 cut(s)	211, 582, 1185, 1513, 1538
BslFI	GGGAC	5 cut(s)	516, 809, 984, 1161, 1630
BslI	CCNNNNNNNGG	2 cut(s)	1184, 1579
BsmAI	GTCTC	4 cut(s)	155, 1019, 1069, 1106
BsmBI	CGTCTC	1 cut(s)	1019
BsmFI	GGGAC	5 cut(s)	516, 809, 984, 1161, 1630
Bsp119I	TTCGAA	1 cut(s)	516
Bsp1286I	GDGCHC	2 cut(s)	1534, 1628
Bsp143I	GATC	7 cut(s)	66, 124, 129, 177, 613, 670, 1131
Bsp1720I	GCTNAGC	1 cut(s)	73
BspACI	CCGC	6 cut(s)	139, 154, 170, 698, 776, 1390
BspCNI	CTCAG	6 cut(s)	106, 340, 1239, 1240, 1254, 1532
BspFNI	CGCG	4 cut(s)	82, 141, 1161, 1191
BspHI	TCATGA	1 cut(s)	1306
BspLI	GGNNCC	4 cut(s)	797, 833, 863, 1232
BspOI	GCTAGC	1 cut(s)	1446
BspPI	GGATC	3 cut(s)	124, 185, 1139
BspQI	GCTCTTC	2 cut(s)	1409, 1633
BspT104I	TTCGAA	1 cut(s)	516
BspT107I	GGYRCC	3 cut(s)	831, 861, 1230
BsrDI	GCAATG	1 cut(s)	1464
BsrFI	RCCGGY	1 cut(s)	1184
BsrI	ACTGG	2 cut(s)	599, 1295
BssAI	RCCGGY	1 cut(s)	1184
BssECI	CCNNGG	6 cut(s)	307, 337, 454, 680, 1393, 1479
BssHII	GCGCGC	1 cut(s)	80
BssMI	GATC	7 cut(s)	66, 124, 129, 177, 613, 670, 1131
BssNI	GRCGYC	2 cut(s)	412, 1012
BssT1I	CCWWGG	2 cut(s)	307, 680
Bst2UI	CCWGG	7 cut(s)	187, 200, 339, 800, 1367, 1394, 1481
Bst4CI	ACNGT	7 cut(s)	244, 331, 455, 611, 1208, 1544, 1615
Bst6I	CTCTTC	2 cut(s)	1409, 1633
BstACI	GRCGYC	2 cut(s)	412, 1012
BstBI	TTCGAA	1 cut(s)	516
BstDEI	CTNAG	7 cut(s)	73, 93, 348, 1226, 1241, 1248, 1519
BstDSI	CCRYGG	1 cut(s)	454
BstF5I	GGATG	1 cut(s)	1023
BstFNI	CGCG	4 cut(s)	82, 141, 1161, 1191
BstH2I	RGCGCY	2 cut(s)	1248, 1338
BstHHI	GCGC	5 cut(s)	82, 84, 1163, 1247, 1337
BstKTI	GATC	7 cut(s)	69, 127, 132, 180, 616, 673, 1134
BstMAI	GTCTC	4 cut(s)	155, 1019, 1069, 1106
BstMBI	GATC	7 cut(s)	66, 124, 129, 177, 613, 670, 1131
BstMCI	CGRYCG	1 cut(s)	1189
BstMWI	GCNNNNNNNGC	4 cut(s)	224, 492, 578, 1452
BstNI	CCWGG	7 cut(s)	187, 200, 339, 800, 1367, 1394, 1481
BstPAI	GACNNNNGTC	1 cut(s)	1520
BstSCI	CCNGG	8 cut(s)	185, 198, 337, 798, 1365, 1392, 1479, 1536
BstSFI	CTRYAG	1 cut(s)	1279
BstSLI	GKGCMC	1 cut(s)	1534
BstUI	CGCG	4 cut(s)	82, 141, 1161, 1191
BstV1I	GCAGC	3 cut(s)	89, 457, 973
BstV2I	GAAGAC	3 cut(s)	629, 1162, 1629
BstX2I	RGATCY	2 cut(s)	66, 129
BstXI	CCANNNNNNTGG	1 cut(s)	314
BstYI	RGATCY	2 cut(s)	66, 129
BtgI	CCRYGG	1 cut(s)	454
BtrI	CACGTC	1 cut(s)	764
BtsCI	GGATG	1 cut(s)	1023
BtsI	GCAGTG	1 cut(s)	1434
BtsIMutI	CAGTG	3 cut(s)	240, 1288, 1434
CciI	TCATGA	1 cut(s)	1306
CfoI	GCGC	5 cut(s)	82, 84, 1163, 1247, 1337
Cfr10I	RCCGGY	1 cut(s)	1184
Cfr13I	GGNCC	6 cut(s)	597, 796, 802, 1387, 1396, 1515
CseI	GACGC	3 cut(s)	401, 555, 1180
Csp6I	GTAC	3 cut(s)	1315, 1462, 1561
CviAII	CATG	4 cut(s)	32, 416, 464, 1307
CviQI	GTAC	3 cut(s)	1315, 1462, 1561
DdeI	CTNAG	7 cut(s)	73, 93, 348, 1226, 1241, 1248, 1519
DpnI	GATC	7 cut(s)	68, 126, 131, 179, 615, 672, 1133
DpnII	GATC	7 cut(s)	66, 124, 129, 177, 613, 670, 1131
DraIII	CACNNNGTG	1 cut(s)	1429
DrdI	GACNNNNNNGTC	1 cut(s)	1385
DseDI	GACNNNNNNGTC	1 cut(s)	1385
EaeI	YGGCCR	3 cut(s)	466, 1363, 1510
Eam1104I	CTCTTC	2 cut(s)	1409, 1633
EarI	CTCTTC	2 cut(s)	1409, 1633
EciI	GGCGGA	1 cut(s)	1379
Ecl136II	GAGCTC	1 cut(s)	1626
Eco130I	CCWWGG	2 cut(s)	307, 680
Eco24I	GRGCYC	1 cut(s)	1628
Eco47I	GGWCC	5 cut(s)	597, 796, 802, 1387, 1515
Eco47III	AGCGCT	2 cut(s)	1246, 1336
Eco53kI	GAGCTC	1 cut(s)	1626
Eco57I	CTGAAG	5 cut(s)	36, 186, 950, 1111, 1156
EcoICRI	GAGCTC	1 cut(s)	1626
EcoRI	GAATTC	1 cut(s)	1068
EcoRII	CCWGG	7 cut(s)	185, 198, 337, 798, 1365, 1392, 1479
EcoT14I	CCWWGG	2 cut(s)	307, 680
EcoT38I	GRGCYC	1 cut(s)	1628
ErhI	CCWWGG	2 cut(s)	307, 680
Esp3I	CGTCTC	1 cut(s)	1019
FaeI	CATG	4 cut(s)	35, 419, 467, 1310
FaiI	YATR	9 cut(s)	33, 296, 298, 300, 417, 465, 474, 1308, 1320
FalI	AAGNNNNNCTT	2 cut(s)	34, 66
FaqI	GGGAC	5 cut(s)	516, 809, 984, 1161, 1630
FatI	CATG	4 cut(s)	31, 415, 463, 1306
FauI	CCCGC	3 cut(s)	146, 163, 691
FbaI	TGATCA	2 cut(s)	124, 613
Fnu4HI	GCNGC	3 cut(s)	78, 446, 962
FokI	GGATG	1 cut(s)	1010
FriOI	GRGCYC	1 cut(s)	1628
Fsp4HI	GCNGC	3 cut(s)	78, 446, 962
FspBI	CTAG	5 cut(s)	524, 681, 695, 1338, 1443
GlaI	GCGC	5 cut(s)	81, 83, 1162, 1246, 1336
GluI	GCNGC	3 cut(s)	78, 446, 962
GsaI	CCCAGC	1 cut(s)	961
HaeII	RGCGCY	2 cut(s)	1248, 1338
HapII	CCGG	5 cut(s)	211, 582, 1185, 1513, 1538
HgaI	GACGC	3 cut(s)	401, 555, 1180
HhaI	GCGC	5 cut(s)	82, 84, 1163, 1247, 1337
Hin1I	GRCGYC	2 cut(s)	412, 1012
Hin1II	CATG	4 cut(s)	35, 419, 467, 1310
Hin6I	GCGC	5 cut(s)	80, 82, 1161, 1245, 1335
HinP1I	GCGC	5 cut(s)	80, 82, 1161, 1245, 1335
HincII	GTYRAC	1 cut(s)	395
HindII	GTYRAC	1 cut(s)	395
HindIII	AAGCTT	1 cut(s)	511
HinfI	GANTC	9 cut(s)	182, 237, 350, 362, 585, 687, 1037, 1588, 1643
HpaII	CCGG	5 cut(s)	211, 582, 1185, 1513, 1538
HphI	GGTGA	3 cut(s)	572, 580, 623
Hpy166II	GTNNAC	7 cut(s)	395, 434, 458, 767, 1315, 1354, 1532
Hpy188I	TCNGA	8 cut(s)	55, 129, 367, 376, 554, 1074, 1347, 1642
Hpy188III	TCNNGA	7 cut(s)	347, 641, 997, 1016, 1129, 1307, 1474
Hpy8I	GTNNAC	7 cut(s)	395, 434, 458, 767, 1315, 1354, 1532
Hpy99I	CGWCG	1 cut(s)	549
HpyAV	CCTTC	8 cut(s)	269, 279, 532, 551, 773, 846, 1432, 1480
HpyCH4III	ACNGT	7 cut(s)	244, 331, 455, 611, 1208, 1544, 1615
HpyCH4IV	ACGT	3 cut(s)	564, 763, 1012
HpyCH4V	TGCA	4 cut(s)	35, 902, 1122, 1532
HpyF10VI	GCNNNNNNNGC	4 cut(s)	224, 492, 578, 1452
HpyF3I	CTNAG	7 cut(s)	73, 93, 348, 1226, 1241, 1248, 1519
HpySE526I	ACGT	3 cut(s)	564, 763, 1012
Hsp92I	GRCGYC	2 cut(s)	412, 1012
Hsp92II	CATG	4 cut(s)	35, 419, 467, 1310
HspAI	GCGC	5 cut(s)	80, 82, 1161, 1245, 1335
Ksp22I	TGATCA	2 cut(s)	124, 613
Kzo9I	GATC	7 cut(s)	66, 124, 129, 177, 613, 670, 1131
LguI	GCTCTTC	2 cut(s)	1409, 1633
LmnI	GCTCC	2 cut(s)	855, 924
Lsp1109I	GCAGC	3 cut(s)	89, 457, 973
LweI	GCATC	2 cut(s)	558, 919
MaeI	CTAG	5 cut(s)	524, 681, 695, 1338, 1443
MaeII	ACGT	3 cut(s)	564, 763, 1012
MaeIII	GTNAC	6 cut(s)	560, 586, 674, 1038, 1155, 1431
MalI	GATC	7 cut(s)	68, 126, 131, 179, 615, 672, 1133
MboI	GATC	7 cut(s)	66, 124, 129, 177, 613, 670, 1131
MboII	GAAGA	7 cut(s)	371, 392, 629, 1162, 1396, 1620, 1629
MflI	RGATCY	2 cut(s)	66, 129
MhlI	GDGCHC	2 cut(s)	1534, 1628
MluCI	AATT	1 cut(s)	1068
MlyI	GAGTC	5 cut(s)	191, 359, 594, 1046, 1652
MroXI	GAANNNNTTC	1 cut(s)	49
MseI	TTAA	4 cut(s)	720, 1212, 1497, 1663
MspI	CCGG	5 cut(s)	211, 582, 1185, 1513, 1538
MspR9I	CCNGG	8 cut(s)	187, 200, 339, 800, 1367, 1394, 1481, 1538
MvaI	CCWGG	7 cut(s)	187, 200, 339, 800, 1367, 1394, 1481
MvnI	CGCG	4 cut(s)	82, 141, 1161, 1191
MwoI	GCNNNNNNNGC	4 cut(s)	224, 492, 578, 1452
NciI	CCSGG	1 cut(s)	1538
NdeII	GATC	7 cut(s)	66, 124, 129, 177, 613, 670, 1131
NheI	GCTAGC	1 cut(s)	1442
NlaIII	CATG	4 cut(s)	35, 419, 467, 1310
NlaIV	GGNNCC	4 cut(s)	797, 833, 863, 1232
NmuCI	GTSAC	4 cut(s)	560, 586, 1038, 1155
NspV	TTCGAA	1 cut(s)	516
PagI	TCATGA	1 cut(s)	1306
PauI	GCGCGC	1 cut(s)	80
PciSI	GCTCTTC	2 cut(s)	1409, 1633
PcsI	WCGNNNNNNNCGW	1 cut(s)	760
PdmI	GAANNNNTTC	1 cut(s)	49
PfeI	GAWTC	4 cut(s)	237, 362, 687, 1588
PflFI	GACNNNGTC	1 cut(s)	1544
PfoI	TCCNGGA	2 cut(s)	185, 1536
PkrI	GCNGC	3 cut(s)	79, 447, 963
PleI	GAGTC	5 cut(s)	190, 358, 593, 1045, 1651
PpsI	GAGTC	5 cut(s)	190, 358, 593, 1045, 1651
PshAI	GACNNNNGTC	1 cut(s)	1520
Psp124BI	GAGCTC	1 cut(s)	1628
Psp6I	CCWGG	7 cut(s)	185, 198, 337, 798, 1365, 1392, 1479
PspFI	CCCAGC	1 cut(s)	957
PspGI	CCWGG	7 cut(s)	185, 198, 337, 798, 1365, 1392, 1479
PspN4I	GGNNCC	4 cut(s)	797, 833, 863, 1232
PspPI	GGNCC	6 cut(s)	597, 796, 802, 1387, 1396, 1515
PsuI	RGATCY	2 cut(s)	66, 129
PsyI	GACNNNGTC	1 cut(s)	1544
PteI	GCGCGC	1 cut(s)	80
RsaI	GTAC	3 cut(s)	1316, 1463, 1562
RsaNI	GTAC	3 cut(s)	1315, 1462, 1561
SacI	GAGCTC	1 cut(s)	1628
SapI	GCTCTTC	2 cut(s)	1409, 1633
SaqAI	TTAA	4 cut(s)	720, 1212, 1497, 1663
SatI	GCNGC	3 cut(s)	78, 446, 962
Sau3AI	GATC	7 cut(s)	66, 124, 129, 177, 613, 670, 1131
Sau96I	GGNCC	6 cut(s)	597, 796, 802, 1387, 1396, 1515
SchI	GAGTC	5 cut(s)	191, 359, 594, 1046, 1652
ScrFI	CCNGG	8 cut(s)	187, 200, 339, 800, 1367, 1394, 1481, 1538
SduI	GDGCHC	2 cut(s)	1534, 1628
SfaNI	GCATC	2 cut(s)	558, 919
SfcI	CTRYAG	1 cut(s)	1279
SfiI	GGCCNNNNNGGCC	1 cut(s)	492
SfuI	TTCGAA	1 cut(s)	516
SinI	GGWCC	5 cut(s)	597, 796, 802, 1387, 1515
Sse9I	AATT	1 cut(s)	1068
SsiI	CCGC	6 cut(s)	139, 154, 170, 698, 776, 1390
SspI	AATATT	1 cut(s)	1144
SspMI	CTAG	5 cut(s)	524, 681, 695, 1338, 1443
SstI	GAGCTC	1 cut(s)	1628
StyD4I	CCNGG	8 cut(s)	185, 198, 337, 798, 1365, 1392, 1479, 1536
StyI	CCWWGG	2 cut(s)	307, 680
TaaI	ACNGT	7 cut(s)	244, 331, 455, 611, 1208, 1544, 1615
TaiI	ACGT	3 cut(s)	567, 766, 1015
TaqI	TCGA	5 cut(s)	98, 180, 516, 544, 1017
TaqII	GACCGA	1 cut(s)	1587
TasI	AATT	1 cut(s)	1068
TatI	WGTACW	2 cut(s)	1314, 1461
TfiI	GAWTC	4 cut(s)	237, 362, 687, 1588
Tru1I	TTAA	4 cut(s)	720, 1212, 1497, 1663
Tru9I	TTAA	4 cut(s)	720, 1212, 1497, 1663
TscAI	CASTG	3 cut(s)	247, 1295, 1434
TseFI	GTSAC	4 cut(s)	560, 586, 1038, 1155
TseI	GCWGC	3 cut(s)	77, 445, 961
Tsp45I	GTSAC	4 cut(s)	560, 586, 1038, 1155
TspDTI	ATGAA	4 cut(s)	393, 1012, 1323, 1396
TspRI	CASTG	3 cut(s)	247, 1295, 1434
Tth111I	GACNNNGTC	1 cut(s)	1544
VneI	GTGCAC	1 cut(s)	1530
VpaK11BI	GGWCC	5 cut(s)	597, 796, 802, 1387, 1515
XapI	RAATTY	1 cut(s)	1068
XmaJI	CCTAGG	1 cut(s)	680
XmnI	GAANNNNTTC	1 cut(s)	49
XspI	CTAG	5 cut(s)	524, 681, 695, 1338, 1443
ZraI	GACGTC	1 cut(s)	1013

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.