Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0000311

Physical Location & Seq

Genomic Coordinates Forward (+)

17814094 .. 17816231

Gene Structure 2138 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g21410.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1200 bp

ATGGTATTCCCTGGCTGTCCGGAGACATTTGAGGAGTCTGAGCAATCTGTTGAAGAACAACAGCAACAACAATGGCAAGGCCAACAAGGCGGAGGCCACCGCCAGCGACACGGACGTCGACAAGGGCAATTCGGAGAGCAAGGCCAACAAGAGTTTGAACAGCTAGACCGACACCAGAGGGTGCGACGCATCAAGGAAGGTGATGTTATCGCAATCCCCGCCGGAGCCACAACCTGGACTCACAACGATGGTGATCAATCTCTTGTTTTTGTTACTCTTCTAGACATCGGCAACAACCACAACCAGCTTGACCAAAACCCAAGAGGCGATTCTATCTTGCTGGTAACCCGCATGCAAGATGAGTTCAACCAACAAGGCCAAAGCCAATGGTGGAAACAAGGACAACAAGGCCAAAGCCAACGGGGACAGCAAGGCCGACAACAAGGAAGGAGCAGGCGCCAACAGCAGGGTAACAACAACAACAATGTCTTTGCCGGCTTCGACACCCAGCTCCTCGCCGATGCTCTCAACATTGACCAACAGACTGTCCAGCAGCTCCAGGGACAGAATGACAACAGGCCACAAATTGTTAGGGTTGAGGGACGTTTCGACTTTGTCGAGCCACCAGAGTCACAGAGGGAGGAAAGACAACTGCAAGGACAACAGGGCCGCCAGAATGGCTTTGAGGAGGTATTCTGCCACATGCAGATCAAGCAGAACATCGGCAAGCCTTCCATGGCTGACGTCTTCAGCCCACAAGCCGGTCGCATCAGCACCCTCAACAGCTTCAGCATGCCTATTCTCAGGCACCTCCGTCTCAGCGCTGAGAGAGGTTTCTTCTACAACAATGCTATCCACAGCCCCCGCTGGAACTTGAATGCTCATGAGATCATCTATGTCATCAGAGGTAGCGCCAGGGTTCAGGTGGTGAACGACAACGGTGAGACCATCTTGGACGACCAGGTCCGCCAGGGACAACTCTTCATCGTGCCGCAAAACCACGCCGTGTTGCAAAAAGCCCAGAGCAACGGGTACGAGTACATTGCCTTCAAGACCAATGACAATGCCATGGTCAACACTCTAGCTGGCAGGACCTCCGTCTTGCGATCACTCCCCGACGTGGTCCTCGCCAACGCCTACCAGATGGACCGCGAGCAGGCAAGGACCTCAAGTATAACAGGCAGGAGACTCTTGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009791 GO:0009987 GO:0010033 GO:0010154 GO:0010431 GO:0021700 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033095 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045735 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071695 GO:0097305 GO:0097306 GO:0097708 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

400

Amino Acids

45.56

Weight (kDa)

6.57

Isoelectric Point (pI)

61.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	55 - 102	1.8e-07	Cupin
Cupin_1	PF00190	240 - 387	1.3e-39	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03880 AT1G03890 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT5G44120 AT5G44120 AT5G44120
fragaria_vesca	FvH4_2g21390 FvH4_2g21390 FvH4_2g21400 FvH4_2g21410 FvH4_2g21410 FvH4_2g21410 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21440 FvH4_3g19080
malus_domestica	MD01G1024700.v1.1 MD05G1196800.v1.1 MD05G1196900.v1.1 MD17G1078200.v1.1
prunus_persica	Prupe.8G223300_v2.0.a1 Prupe.8G223400_v2.0.a1 Prupe.8G223400_v2.0.a1
pyrus_communis	pycom05g18380 pycom05g18390
rosa_chinensis	RchiOBHm_Chr6g0287991 RchiOBHm_Chr6g0288001 RchiOBHm_Chr6g0288021 RchiOBHm_Chr6g0288031 RchiOBHm_Chr6g0288041 RchiOBHm_Chr6g0288051 RchiOBHm_Chr6g0288071
rosa_laevigata	RLG00000012441 RLG00000012443 RLG00000012444 RLG00000012446 RLG00000012447 RLG00000012448
rosa_multiflora	Rmu_co8147412.1_g000001 Rmu_co8487931.1_g000001 Rmu_co8505755.1_g000001 Rmu_sc0001117.1_g000003 Rmu_sc0001117.1_g000005 Rmu_sc0001117.1_g000011 Rmu_sc0001117.1_g000013 Rmu_sc0005266.1_g000010 Rmu_sc0010960.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252330 Rroxscaffold_7G00180530 Rroxscaffold_7G00180550 Rroxscaffold_7G00180560 Rroxscaffold_7G00180570 Rroxscaffold_7G00180580 Rroxscaffold_7G00180590
rosa_rugosa	Rorug06G0041100 Rorug06G0041200 Rorug06G0041200 Rorug06G0041400 Rorug06G0193700 Rorug06G0193700 Rorug06G0193700 Rorug06G0193800 Rorug06G0193800 Rorug06G0193900 Rorug06G0194000 Rorug06G0194100
rosa_samantha	Rh6AG303300 Rh6AG303400 Rh6AG303500 Rh6AG303700 Rh6AG303800 Rh6AG303900 Rh6AG304100 Rh6AG304200 Rh6BG309500 Rh6BG309600 Rh6BG309700 Rh6BG309900 Rh6BG310000 Rh6BG310100 Rh6BG310200 Rh6CG299600 Rh6CG299800 Rh6CG300000 Rh6CG300200 Rh6CG300300 Rh6CG317100 Rh6CG317300 Rh6CG317500 Rh6CG317700 Rh6CG317800 Rh6CG318200 Rh6DG302000 Rh6DG302100 Rh6DG302300 Rh6DG302500 Rh6DG302600 Rh6DG302700 Rh6DG303100
rosa_wichuraiana	Rw6G026230 Rw6G026240 Rw6G026260 Rw6G026280 Rw6G026300 Rw6G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	114, 962
AatII	GACGTC	2 cut(s)	118, 747
AccB1I	GGYRCC	2 cut(s)	456, 807
AccB7I	CCANNNNNTGG	1 cut(s)	234
AccI	GTMKAC	1 cut(s)	118
AccII	CGCG	1 cut(s)	1152
AccIII	TCCGGA	1 cut(s)	19
AciI	CCGC	9 cut(s)	90, 100, 219, 349, 670, 865, 967, 992, 1150
AcuI	CTGAAG	2 cut(s)	733, 772
AcyI	GRCGYC	3 cut(s)	115, 457, 744
AdeI	CACNNNGTG	1 cut(s)	1006
AfaI	GTAC	2 cut(s)	1034, 1040
AfeI	AGCGCT	1 cut(s)	823
AfiI	CCNNNNNNNGG	5 cut(s)	234, 466, 761, 1120, 1156
AgsI	TTSAA	5 cut(s)	53, 158, 367, 877, 1051
AjiI	CACGTC	1 cut(s)	1120
AjnI	CCWGG	6 cut(s)	10, 233, 558, 914, 960, 969
AjuI	GAANNNNNNNTTGG	2 cut(s)	313, 345
AluBI	AGCT	6 cut(s)	163, 307, 511, 556, 786, 1085
AluI	AGCT	6 cut(s)	163, 307, 511, 556, 786, 1085
Alw26I	GTCTC	4 cut(s)	17, 821, 938, 1180
Aor13HI	TCCGGA	1 cut(s)	19
Aor51HI	AGCGCT	1 cut(s)	823
AoxI	GGCC	8 cut(s)	79, 94, 142, 376, 409, 433, 578, 667
ApeKI	GCWGC	1 cut(s)	553
ArsI	GACNNNNNNTTYG	1 cut(s)	1179
AspLEI	GCGC	3 cut(s)	459, 824, 914
AspS9I	GGNCC	6 cut(s)	667, 964, 1092, 1123, 1147, 1164
AsuHPI	GGTGA	4 cut(s)	212, 263, 940, 953
AvaII	GGWCC	5 cut(s)	964, 1092, 1123, 1147, 1164
BanI	GGYRCC	2 cut(s)	456, 807
BarI	GAAGNNNNNNTAC	2 cut(s)	1031, 1063
BbsI	GAAGAC	1 cut(s)	739
BbvI	GCAGC	1 cut(s)	565
BccI	CCATC	3 cut(s)	242, 956, 1138
BceAI	ACGGC	1 cut(s)	989
BcgI	CGANNNNNNTGC	2 cut(s)	1025, 1059
BciT130I	CCWGG	6 cut(s)	12, 235, 560, 916, 962, 971
BclI	TGATCA	1 cut(s)	253
BcoDI	GTCTC	4 cut(s)	17, 821, 938, 1180
BfaI	CTAG	3 cut(s)	164, 281, 1082
BfoI	RGCGCY	3 cut(s)	460, 825, 915
BglI	GCCNNNNNGGC	2 cut(s)	87, 678
BisI	GCNGC	3 cut(s)	554, 670, 992
BlsI	GCNGC	3 cut(s)	555, 671, 993
Bme1390I	CCNGG	6 cut(s)	12, 235, 560, 916, 962, 971
Bme18I	GGWCC	5 cut(s)	964, 1092, 1123, 1147, 1164
BmgBI	CACGTC	1 cut(s)	1120
BmgT120I	GGNCC	6 cut(s)	667, 964, 1092, 1123, 1147, 1164
BmiI	GGNNCC	3 cut(s)	226, 458, 809
BmrFI	CCNGG	6 cut(s)	12, 235, 560, 916, 962, 971
BmsI	GCATC	3 cut(s)	198, 511, 777
BoxI	GACNNNNGTC	1 cut(s)	1097
BpiI	GAAGAC	1 cut(s)	739
BpmI	CTGGAG	1 cut(s)	542
BpuEI	CTTGAG	1 cut(s)	1153
BsaBI	GATNNNNATC	1 cut(s)	252
BsaHI	GRCGYC	3 cut(s)	115, 457, 744
BsaI	GGTCTC	1 cut(s)	938
BsaJI	CCNNGG	6 cut(s)	10, 559, 735, 915, 970, 1068
BsaWI	WCCGGW	1 cut(s)	19
Bsc4I	CCNNNNNNNGG	5 cut(s)	234, 466, 761, 1120, 1156
Bse118I	RCCGGY	2 cut(s)	494, 761
Bse3DI	GCAATG	1 cut(s)	1041
Bse8I	GATNNNNATC	1 cut(s)	252
BseAI	TCCGGA	1 cut(s)	19
BseBI	CCWGG	6 cut(s)	12, 235, 560, 916, 962, 971
BseDI	CCNNGG	6 cut(s)	10, 559, 735, 915, 970, 1068
BseJI	GATNNNNATC	1 cut(s)	252
BseLI	CCNNNNNNNGG	5 cut(s)	234, 466, 761, 1120, 1156
BseMI	GCAATG	1 cut(s)	1041
BseMII	CTCAG	4 cut(s)	30, 816, 817, 832
BseRI	GAGGAG	3 cut(s)	47, 503, 701
BseXI	GCAGC	1 cut(s)	565
BseYI	CCCAGC	1 cut(s)	507
Bsh1236I	CGCG	1 cut(s)	1152
Bsh1285I	CGRYCG	1 cut(s)	766
BshFI	GGCC	8 cut(s)	81, 96, 144, 378, 411, 435, 580, 669
BshNI	GGYRCC	2 cut(s)	456, 807
BsiEI	CGRYCG	1 cut(s)	766
BsiSI	CCGG	4 cut(s)	20, 222, 495, 762
BslFI	GGGAC	4 cut(s)	438, 576, 615, 987
BslI	CCNNNNNNNGG	5 cut(s)	234, 466, 761, 1120, 1156
BsmAI	GTCTC	4 cut(s)	17, 821, 938, 1180
BsmBI	CGTCTC	1 cut(s)	821
BsmFI	GGGAC	4 cut(s)	438, 576, 615, 987
BsmI	GAATGC	1 cut(s)	883
BsnI	GGCC	8 cut(s)	81, 96, 144, 378, 411, 435, 580, 669
Bso31I	GGTCTC	1 cut(s)	938
Bsp13I	TCCGGA	1 cut(s)	19
Bsp143I	GATC	4 cut(s)	253, 708, 888, 1106
Bsp19I	CCATGG	2 cut(s)	735, 1068
BspACI	CCGC	9 cut(s)	90, 100, 219, 349, 670, 865, 967, 992, 1150
BspANI	GGCC	8 cut(s)	81, 96, 144, 378, 411, 435, 580, 669
BspCNI	CTCAG	4 cut(s)	31, 816, 817, 831
BspEI	TCCGGA	1 cut(s)	19
BspFNI	CGCG	1 cut(s)	1152
BspHI	TCATGA	1 cut(s)	883
BspLI	GGNNCC	3 cut(s)	226, 458, 809
BspT107I	GGYRCC	2 cut(s)	456, 807
BspTNI	GGTCTC	1 cut(s)	938
BsrDI	GCAATG	1 cut(s)	1041
BsrFI	RCCGGY	2 cut(s)	494, 761
BssAI	RCCGGY	2 cut(s)	494, 761
BssECI	CCNNGG	6 cut(s)	10, 559, 735, 915, 970, 1068
BssMI	GATC	4 cut(s)	253, 708, 888, 1106
BssNI	GRCGYC	3 cut(s)	115, 457, 744
BssT1I	CCWWGG	2 cut(s)	735, 1068
Bst2UI	CCWGG	6 cut(s)	12, 235, 560, 916, 962, 971
Bst4CI	ACNGT	2 cut(s)	547, 941
Bst6I	CTCTTC	2 cut(s)	282, 986
BstACI	GRCGYC	3 cut(s)	115, 457, 744
BstC8I	GCNNGC	9 cut(s)	104, 353, 455, 496, 728, 794, 1087, 1154, 1158
BstDEI	CTNAG	4 cut(s)	39, 803, 818, 825
BstDSI	CCRYGG	2 cut(s)	735, 1068
BstEII	GGTNACC	1 cut(s)	343
BstFNI	CGCG	1 cut(s)	1152
BstH2I	RGCGCY	3 cut(s)	460, 825, 915
BstHHI	GCGC	3 cut(s)	459, 824, 914
BstKTI	GATC	4 cut(s)	256, 711, 891, 1109
BstMAI	GTCTC	4 cut(s)	17, 821, 938, 1180
BstMBI	GATC	4 cut(s)	253, 708, 888, 1106
BstMCI	CGRYCG	1 cut(s)	766
BstMWI	GCNNNNNNNGC	5 cut(s)	87, 218, 463, 678, 712
BstNI	CCWGG	6 cut(s)	12, 235, 560, 916, 962, 971
BstNSI	RCATGY	3 cut(s)	355, 706, 796
BstPAI	GACNNNNGTC	1 cut(s)	1097
BstPI	GGTNACC	1 cut(s)	343
BstSCI	CCNGG	6 cut(s)	10, 233, 558, 914, 960, 969
BstUI	CGCG	1 cut(s)	1152
BstV1I	GCAGC	1 cut(s)	565
BstV2I	GAAGAC	1 cut(s)	739
BsuRI	GGCC	8 cut(s)	81, 96, 144, 378, 411, 435, 580, 669
BtgI	CCRYGG	2 cut(s)	735, 1068
BtrI	CACGTC	1 cut(s)	1120
Cac8I	GCNNGC	9 cut(s)	104, 353, 455, 496, 728, 794, 1087, 1154, 1158
CciI	TCATGA	1 cut(s)	883
CfoI	GCGC	3 cut(s)	459, 824, 914
Cfr10I	RCCGGY	2 cut(s)	494, 761
Cfr13I	GGNCC	6 cut(s)	667, 964, 1092, 1123, 1147, 1164
CseI	GACGC	1 cut(s)	195
CsiI	ACCWGGT	1 cut(s)	960
Csp6I	GTAC	2 cut(s)	1033, 1039
CviAII	CATG	6 cut(s)	352, 703, 736, 793, 884, 1069
CviQI	GTAC	2 cut(s)	1033, 1039
DdeI	CTNAG	4 cut(s)	39, 803, 818, 825
DinI	GGCGCC	1 cut(s)	458
DpnI	GATC	4 cut(s)	255, 710, 890, 1108
DpnII	GATC	4 cut(s)	253, 708, 888, 1106
DraIII	CACNNNGTG	1 cut(s)	1006
DrdI	GACNNNNNNGTC	2 cut(s)	114, 962
DseDI	GACNNNNNNGTC	2 cut(s)	114, 962
Eam1104I	CTCTTC	2 cut(s)	282, 986
EarI	CTCTTC	2 cut(s)	282, 986
EciI	GGCGGA	2 cut(s)	105, 956
Eco130I	CCWWGG	2 cut(s)	735, 1068
Eco31I	GGTCTC	1 cut(s)	938
Eco47I	GGWCC	5 cut(s)	964, 1092, 1123, 1147, 1164
Eco47III	AGCGCT	1 cut(s)	823
Eco57I	CTGAAG	2 cut(s)	733, 772
Eco91I	GGTNACC	1 cut(s)	343
EcoO109I	RGGNCCY	2 cut(s)	1092, 1164
EcoO65I	GGTNACC	1 cut(s)	343
EcoRII	CCWGG	6 cut(s)	10, 233, 558, 914, 960, 969
EcoT14I	CCWWGG	2 cut(s)	735, 1068
EgeI	GGCGCC	1 cut(s)	458
EheI	GGCGCC	1 cut(s)	458
ErhI	CCWWGG	2 cut(s)	735, 1068
Esp3I	CGTCTC	1 cut(s)	821
FaeI	CATG	6 cut(s)	355, 706, 739, 796, 887, 1072
FaiI	YATR	8 cut(s)	353, 704, 737, 794, 885, 897, 1070, 1175
FaqI	GGGAC	4 cut(s)	438, 576, 615, 987
FatI	CATG	6 cut(s)	351, 702, 735, 792, 883, 1068
FauI	CCCGC	3 cut(s)	226, 356, 872
FbaI	TGATCA	1 cut(s)	253
FblI	GTMKAC	1 cut(s)	118
Fnu4HI	GCNGC	3 cut(s)	554, 670, 992
Fsp4HI	GCNGC	3 cut(s)	554, 670, 992
FspBI	CTAG	3 cut(s)	164, 281, 1082
GlaI	GCGC	3 cut(s)	458, 823, 913
GluI	GCNGC	3 cut(s)	554, 670, 992
GsaI	CCCAGC	1 cut(s)	511
GsuI	CTGGAG	1 cut(s)	542
HaeII	RGCGCY	3 cut(s)	460, 825, 915
HaeIII	GGCC	8 cut(s)	81, 96, 144, 378, 411, 435, 580, 669
HapII	CCGG	4 cut(s)	20, 222, 495, 762
HgaI	GACGC	1 cut(s)	195
HhaI	GCGC	3 cut(s)	459, 824, 914
Hin1I	GRCGYC	3 cut(s)	115, 457, 744
Hin1II	CATG	6 cut(s)	355, 706, 739, 796, 887, 1072
Hin6I	GCGC	3 cut(s)	457, 822, 912
HinP1I	GCGC	3 cut(s)	457, 822, 912
HincII	GTYRAC	2 cut(s)	119, 1075
HindII	GTYRAC	2 cut(s)	119, 1075
HinfI	GANTC	5 cut(s)	35, 238, 329, 629, 1188
HpaII	CCGG	4 cut(s)	20, 222, 495, 762
HphI	GGTGA	4 cut(s)	212, 263, 940, 953
Hpy166II	GTNNAC	3 cut(s)	119, 931, 1075
Hpy188I	TCNGA	3 cut(s)	40, 134, 905
Hpy188III	TCNNGA	4 cut(s)	20, 281, 884, 1051
Hpy8I	GTNNAC	3 cut(s)	119, 931, 1075
Hpy99I	CGWCG	3 cut(s)	120, 189, 1121
HpyAV	CCTTC	4 cut(s)	191, 441, 741, 1057
HpyCH4III	ACNGT	2 cut(s)	547, 941
HpyCH4IV	ACGT	4 cut(s)	115, 604, 744, 1119
HpyCH4V	TGCA	4 cut(s)	355, 655, 706, 1012
HpyF10VI	GCNNNNNNNGC	5 cut(s)	87, 218, 463, 678, 712
HpyF3I	CTNAG	4 cut(s)	39, 803, 818, 825
HpySE526I	ACGT	4 cut(s)	115, 604, 744, 1119
Hsp92I	GRCGYC	3 cut(s)	115, 457, 744
Hsp92II	CATG	6 cut(s)	355, 706, 739, 796, 887, 1072
HspAI	GCGC	3 cut(s)	457, 822, 912
KasI	GGCGCC	1 cut(s)	456
Kpn2I	TCCGGA	1 cut(s)	19
KroI	GCCGGC	1 cut(s)	494
KroNI	GCCGGC	1 cut(s)	496
Ksp22I	TGATCA	1 cut(s)	253
Kzo9I	GATC	4 cut(s)	253, 708, 888, 1106
LmnI	GCTCC	4 cut(s)	224, 450, 516, 561
Lsp1109I	GCAGC	1 cut(s)	565
LweI	GCATC	3 cut(s)	198, 511, 777
MabI	ACCWGGT	1 cut(s)	960
MaeI	CTAG	3 cut(s)	164, 281, 1082
MaeII	ACGT	4 cut(s)	115, 604, 744, 1119
MaeIII	GTNAC	4 cut(s)	271, 343, 470, 630
MalI	GATC	4 cut(s)	255, 710, 890, 1108
MboI	GATC	4 cut(s)	253, 708, 888, 1106
MboII	GAAGA	5 cut(s)	65, 269, 739, 829, 973
MluCI	AATT	2 cut(s)	128, 585
Mly113I	GGCGCC	1 cut(s)	457
MlyI	GAGTC	4 cut(s)	44, 232, 638, 1182
MroI	TCCGGA	1 cut(s)	19
MroNI	GCCGGC	1 cut(s)	494
MslI	CAYNNNNRTG	1 cut(s)	246
MspA1I	CMGCKG	1 cut(s)	867
MspI	CCGG	4 cut(s)	20, 222, 495, 762
MspR9I	CCNGG	6 cut(s)	12, 235, 560, 916, 962, 971
Mva1269I	GAATGC	1 cut(s)	883
MvaI	CCWGG	6 cut(s)	12, 235, 560, 916, 962, 971
MvnI	CGCG	1 cut(s)	1152
MwoI	GCNNNNNNNGC	5 cut(s)	87, 218, 463, 678, 712
NaeI	GCCGGC	1 cut(s)	496
NarI	GGCGCC	1 cut(s)	457
NcoI	CCATGG	2 cut(s)	735, 1068
NdeII	GATC	4 cut(s)	253, 708, 888, 1106
NgoMIV	GCCGGC	1 cut(s)	494
NlaIII	CATG	6 cut(s)	355, 706, 739, 796, 887, 1072
NlaIV	GGNNCC	3 cut(s)	226, 458, 809
NmuCI	GTSAC	1 cut(s)	630
NspI	RCATGY	3 cut(s)	355, 706, 796
PaeI	GCATGC	2 cut(s)	355, 796
PagI	TCATGA	1 cut(s)	883
PcsI	WCGNNNNNNNCGW	1 cut(s)	615
PctI	GAATGC	1 cut(s)	883
PdiI	GCCGGC	1 cut(s)	496
PfeI	GAWTC	1 cut(s)	329
PflFI	GACNNNGTC	3 cut(s)	614, 962, 1121
PflMI	CCANNNNNTGG	1 cut(s)	234
PkrI	GCNGC	3 cut(s)	555, 671, 993
PleI	GAGTC	4 cut(s)	43, 232, 637, 1182
PluTI	GGCGCC	1 cut(s)	460
PpsI	GAGTC	4 cut(s)	43, 232, 637, 1182
PpuMI	RGGWCCY	2 cut(s)	1092, 1164
PshAI	GACNNNNGTC	1 cut(s)	1097
Psp5II	RGGWCCY	2 cut(s)	1092, 1164
Psp6I	CCWGG	6 cut(s)	10, 233, 558, 914, 960, 969
PspEI	GGTNACC	1 cut(s)	343
PspFI	CCCAGC	1 cut(s)	507
PspGI	CCWGG	6 cut(s)	10, 233, 558, 914, 960, 969
PspN4I	GGNNCC	3 cut(s)	226, 458, 809
PspPI	GGNCC	6 cut(s)	667, 964, 1092, 1123, 1147, 1164
PspPPI	RGGWCCY	2 cut(s)	1092, 1164
PsyI	GACNNNGTC	3 cut(s)	614, 962, 1121
RsaI	GTAC	2 cut(s)	1034, 1040
RsaNI	GTAC	2 cut(s)	1033, 1039
RseI	CAYNNNNRTG	1 cut(s)	246
SalI	GTCGAC	1 cut(s)	117
SatI	GCNGC	3 cut(s)	554, 670, 992
Sau3AI	GATC	4 cut(s)	253, 708, 888, 1106
Sau96I	GGNCC	6 cut(s)	667, 964, 1092, 1123, 1147, 1164
SchI	GAGTC	4 cut(s)	44, 232, 638, 1182
ScrFI	CCNGG	6 cut(s)	12, 235, 560, 916, 962, 971
SexAI	ACCWGGT	1 cut(s)	960
SfaNI	GCATC	3 cut(s)	198, 511, 777
SfoI	GGCGCC	1 cut(s)	458
SinI	GGWCC	5 cut(s)	964, 1092, 1123, 1147, 1164
SmiMI	CAYNNNNRTG	1 cut(s)	246
SmlI	CTYRAG	1 cut(s)	1168
SmoI	CTYRAG	1 cut(s)	1168
SphI	GCATGC	2 cut(s)	355, 796
Sse9I	AATT	2 cut(s)	128, 585
SsiI	CCGC	9 cut(s)	90, 100, 219, 349, 670, 865, 967, 992, 1150
SspDI	GGCGCC	1 cut(s)	456
SspMI	CTAG	3 cut(s)	164, 281, 1082
StyD4I	CCNGG	6 cut(s)	10, 233, 558, 914, 960, 969
StyI	CCWWGG	2 cut(s)	735, 1068
TaaI	ACNGT	2 cut(s)	547, 941
TaiI	ACGT	4 cut(s)	118, 607, 747, 1122
TaqI	TCGA	4 cut(s)	118, 501, 609, 618
TaqII	GACCGA	1 cut(s)	183
TasI	AATT	2 cut(s)	128, 585
TatI	WGTACW	1 cut(s)	1038
TauI	GCSGC	2 cut(s)	672, 994
TfiI	GAWTC	1 cut(s)	329
TseFI	GTSAC	1 cut(s)	630
TseI	GCWGC	1 cut(s)	553
Tsp45I	GTSAC	1 cut(s)	630
TspDTI	ATGAA	1 cut(s)	973
TspGWI	ACGGA	3 cut(s)	126, 803, 1087
Tth111I	GACNNNGTC	3 cut(s)	614, 962, 1121
Van91I	CCANNNNNTGG	1 cut(s)	234
VpaK11BI	GGWCC	5 cut(s)	964, 1092, 1123, 1147, 1164
XbaI	TCTAGA	1 cut(s)	280
XceI	RCATGY	3 cut(s)	355, 706, 796
XcmI	CCANNNNNNNNNTGG	1 cut(s)	922
XmiI	GTMKAC	1 cut(s)	118
XspI	CTAG	3 cut(s)	164, 281, 1082
ZraI	GACGTC	2 cut(s)	116, 745

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.