Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000311

Physical Location & Seq

Genomic Coordinates Forward (+)

51312632 .. 51316363

Gene Structure 3732 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ25843

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGGCTAAGCCTATAGCTCTCACCTTTTCTCTCTGCTTGCTTGTCCTCTTCCACAGCTGCTTAGCAGCTCGCCAACAATCTCAGTCGAGCCAGCAGAATGAGTGCCAACTAGATCAGCTCCAAGCCCGCGAACCTGATAACCGCATTGAGACTGAAGCGGGTAGGATTGAGTCCTGGGACTACAACCAGGACGACTTCCAGTGTGCTGGTGTTGCCGTTCAACGAATTACCATTGAAAGAAATGGCCTTCACTTGCCTTCTTACACCCACACTCCACAACTCACTTATGTCGTCCAAGGCAATGGTTTTCTATCAACTGTTTTCCCTGGCTGTCCTGAAACTTTTGAAGAAACTGAGCAATCTGATGAAGAACAACAAGGCCAGCAAGGGCGCCGCAGACAGCAAGGTCGTGGACAACAAGAGCAGCAAGAACAAGAAGAGTATGAGCAACAACAACAACAACAAGGCCGTGGACAACAAGGTCGACAAGGCCGTGGACAGCAAGGTCGTCATAGACAACAAGGGCAGCAAGGCCAACAGGGACAAGAGAGCTTTGAACAGCTAGACAGACACCAGAAGGTTCGACGCATCAGAGAAGGTGATGTGATTGCTATTCCTGCTGGTGTCACTTACTGGTCCTACAACGACGGTGACCAACCTCTTGTTGCTGTCAATCTTCTTGATATCAGCAACCAACAAAACCAGCTTGACCGTAACCCCAGGAGATTCTATCTTGCTGGTAACCCACAAGATGAGTTTAACCAACAAGGGCAAAGCCAGAGTCGACGGGGCCAGCAAGGACGTGGACAACAAGGGCAAGGCCAAAGTCAATGGGACCAGGACCAGCAACAGCAACAGCATGGTGGAAGGAGCAGGCACCAGCAACAACAAGAAGGAAACAACAACAACAACATCTTCGCCGGCTTCAACACACAGCTTCTCGGTGACTCTCTGAACATCGATCAACAGACTGCCCAGCAGCTTCAGGGACAAAACGACAACAGACCCCAAATTGTGAGAGTTAGAGGACGTCTTGATTTCATCGAACCACCACGATCACAACAGGAGGAAAGACAACAACAGGGAATACAGAGACAACAGGGAGAACAAGGACAGAATGGTTTTGAGGAGACATTCTGTAACTTCAGGATCAGAGAGAATATTGGCAGGCCTTCACGCGCCGACGTCTTCAATCCCCAAGCTGGTCGCATCAGCACCCTCAACAGCTTTAAGTTGCCTATTCTCAGGTACCTTGACCTCAGCGCTGAGAGAGGCTTCTTCTACAATAATGCTATCTACAGTCCTCACTGGAACTTGAACGCCCATGAAGTCTACTACGTCATTAGAGGTAGTGCTAGGGTTCAGGTTGTGAATGACAATGGCCAGGCCATCTTGGACAATGAGGTCCGCCAGGGACAGCTCTTCATAGTGCCACAGAACCATGCAGTGTTGCAGAAGGCTAGCAACAATGGATACGAGTACATTGCTTTCAAGACCCAAGACAATGCTAAGATTAACACTCTTGCCGGCCGGACCTCAGTCTTGCGGGCACTCCCCGACGTGGTCCTCGCTAACGCGTACCAGATTGATCGACAACAGGCAAGGACTCTCAAGTACAACAGGCAGGAGACTGTTGCTTTGAGCTCATCAAGGTCTTCCCGATCTCAGAGGAACTGGTGGGATATTGCTGAAATGTTTGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009791 GO:0009987 GO:0010033 GO:0010154 GO:0010431 GO:0021700 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033095 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045735 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071695 GO:0097305 GO:0097306 GO:0097708 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

567

Amino Acids

65.11

Weight (kDa)

6.41

Isoelectric Point (pI)

66.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	41 - 249	1.9e-24	Cupin
Cupin_1	PF00190	387 - 534	1.5e-40	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03880 AT1G03890 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT5G44120 AT5G44120 AT5G44120
fragaria_vesca	FvH4_2g21390 FvH4_2g21390 FvH4_2g21400 FvH4_2g21410 FvH4_2g21410 FvH4_2g21410 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21440 FvH4_3g19080
malus_domestica	MD01G1024700.v1.1 MD05G1196800.v1.1 MD05G1196900.v1.1 MD17G1078200.v1.1
prunus_persica	Prupe.8G223300_v2.0.a1 Prupe.8G223400_v2.0.a1 Prupe.8G223400_v2.0.a1
pyrus_communis	pycom05g18380 pycom05g18390
rosa_chinensis	RchiOBHm_Chr6g0287991 RchiOBHm_Chr6g0288001 RchiOBHm_Chr6g0288021 RchiOBHm_Chr6g0288031 RchiOBHm_Chr6g0288041 RchiOBHm_Chr6g0288051 RchiOBHm_Chr6g0288071
rosa_laevigata	RLG00000012441 RLG00000012443 RLG00000012444 RLG00000012446 RLG00000012447 RLG00000012448
rosa_multiflora	Rmu_co8147412.1_g000001 Rmu_co8487931.1_g000001 Rmu_co8505755.1_g000001 Rmu_sc0001117.1_g000003 Rmu_sc0001117.1_g000005 Rmu_sc0001117.1_g000011 Rmu_sc0001117.1_g000013 Rmu_sc0005266.1_g000010 Rmu_sc0010960.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252330 Rroxscaffold_7G00180530 Rroxscaffold_7G00180550 Rroxscaffold_7G00180560 Rroxscaffold_7G00180570 Rroxscaffold_7G00180580 Rroxscaffold_7G00180590
rosa_rugosa	Rorug06G0041100 Rorug06G0041200 Rorug06G0041200 Rorug06G0041400 Rorug06G0193700 Rorug06G0193700 Rorug06G0193700 Rorug06G0193800 Rorug06G0193800 Rorug06G0193900 Rorug06G0194000 Rorug06G0194100
rosa_samantha	Rh6AG303300 Rh6AG303400 Rh6AG303500 Rh6AG303700 Rh6AG303800 Rh6AG303900 Rh6AG304100 Rh6AG304200 Rh6BG309500 Rh6BG309600 Rh6BG309700 Rh6BG309900 Rh6BG310000 Rh6BG310100 Rh6BG310200 Rh6CG299600 Rh6CG299800 Rh6CG300000 Rh6CG300200 Rh6CG300300 Rh6CG317100 Rh6CG317300 Rh6CG317500 Rh6CG317700 Rh6CG317800 Rh6CG318200 Rh6DG302000 Rh6DG302100 Rh6DG302300 Rh6DG302500 Rh6DG302600 Rh6DG302700 Rh6DG303100
rosa_wichuraiana	Rw6G026230 Rw6G026240 Rw6G026260 Rw6G026280 Rw6G026300 Rw6G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	4 cut(s)	405, 480, 504, 1403
AatII	GACGTC	2 cut(s)	1033, 1188
Acc65I	GGTACC	1 cut(s)	1248
AccB1I	GGYRCC	3 cut(s)	390, 876, 1248
AccI	GTMKAC	3 cut(s)	484, 784, 1332
AccII	CGCG	3 cut(s)	129, 1179, 1577
AciI	CCGC	6 cut(s)	127, 142, 158, 394, 1408, 1546
AclWI	GGATC	1 cut(s)	1157
AcoI	YGGCCR	2 cut(s)	1381, 1528
AcuI	CTGAAG	3 cut(s)	174, 968, 1129
AcyI	GRCGYC	3 cut(s)	391, 1030, 1185
AfaI	GTAC	4 cut(s)	1250, 1481, 1580, 1616
AfeI	AGCGCT	1 cut(s)	1264
AfiI	CCNNNNNNNGG	2 cut(s)	1202, 1561
AflIII	ACRYGT	1 cut(s)	1575
AgsI	TTSAA	8 cut(s)	221, 236, 347, 557, 928, 1192, 1318, 1492
AjiI	CACGTC	2 cut(s)	803, 1561
AjnI	CCWGG	7 cut(s)	173, 186, 325, 719, 837, 1383, 1410
Alw21I	GWGCWC	1 cut(s)	1646
Alw26I	GTCTC	4 cut(s)	143, 1087, 1124, 1622
AlwI	GGATC	1 cut(s)	1157
Aor51HI	AGCGCT	1 cut(s)	1264
ApeKI	GCWGC	5 cut(s)	57, 65, 424, 526, 979
ArsI	GACNNNNNNTTYG	4 cut(s)	766, 798, 1621, 1653
Asp718I	GGTACC	1 cut(s)	1248
AspLEI	GCGC	3 cut(s)	393, 1181, 1265
AspS9I	GGNCC	7 cut(s)	636, 790, 835, 841, 1405, 1533, 1564
AsuHPI	GGTGA	4 cut(s)	13, 611, 662, 956
AsuNHI	GCTAGC	1 cut(s)	1460
AvaII	GGWCC	6 cut(s)	636, 835, 841, 1405, 1533, 1564
BaeGI	GKGCMC	1 cut(s)	1552
BalI	TGGCCA	1 cut(s)	1383
BanI	GGYRCC	3 cut(s)	390, 876, 1248
BanII	GRGCYC	1 cut(s)	1646
BbsI	GAAGAC	2 cut(s)	1180, 1647
Bbv12I	GWGCWC	1 cut(s)	1646
BbvCI	CCTCAGC	1 cut(s)	1259
BbvI	GCAGC	5 cut(s)	44, 77, 436, 538, 991
BccI	CCATC	1 cut(s)	1397
BceAI	ACGGC	3 cut(s)	200, 453, 477
BcgI	CGANNNNNNTGC	2 cut(s)	1466, 1500
BciT130I	CCWGG	7 cut(s)	175, 188, 327, 721, 839, 1385, 1412
BciVI	GTATCC	1 cut(s)	1466
BcoDI	GTCTC	4 cut(s)	143, 1087, 1124, 1622
BfaI	CTAG	4 cut(s)	110, 563, 1356, 1461
BfmI	CTRYAG	2 cut(s)	12, 1297
BfoI	RGCGCY	2 cut(s)	394, 1266
BfuI	GTATCC	1 cut(s)	1466
BisI	GCNGC	6 cut(s)	58, 66, 394, 425, 527, 980
BlpI	GCTNAGC	2 cut(s)	6, 61
BlsI	GCNGC	6 cut(s)	59, 67, 395, 426, 528, 981
Bme1390I	CCNGG	7 cut(s)	175, 188, 327, 721, 839, 1385, 1412
Bme18I	GGWCC	6 cut(s)	636, 835, 841, 1405, 1533, 1564
BmgBI	CACGTC	2 cut(s)	803, 1561
BmgT120I	GGNCC	7 cut(s)	636, 790, 835, 841, 1405, 1533, 1564
BmiI	GGNNCC	5 cut(s)	392, 791, 836, 878, 1250
BmrFI	CCNGG	7 cut(s)	175, 188, 327, 721, 839, 1385, 1412
BmsI	GCATC	2 cut(s)	597, 1218
BmtI	GCTAGC	1 cut(s)	1464
BoxI	GACNNNNGTC	1 cut(s)	1538
BpiI	GAAGAC	2 cut(s)	1180, 1647
Bpu10I	CCTNAGC	1 cut(s)	1259
Bpu1102I	GCTNAGC	2 cut(s)	6, 61
BpuEI	CTTGAG	1 cut(s)	1595
Bsa29I	ATCGAT	1 cut(s)	960
BsaHI	GRCGYC	3 cut(s)	391, 1030, 1185
BsaJI	CCNNGG	7 cut(s)	174, 295, 325, 469, 493, 719, 1411
BsaXI	ACNNNNNCTCC	2 cut(s)	256, 286
Bsc4I	CCNNNNNNNGG	2 cut(s)	1202, 1561
Bse118I	RCCGGY	2 cut(s)	920, 1526
Bse1I	ACTGG	4 cut(s)	199, 638, 1313, 1679
Bse3DI	GCAATG	2 cut(s)	307, 1482
BseBI	CCWGG	7 cut(s)	175, 188, 327, 721, 839, 1385, 1412
BseCI	ATCGAT	1 cut(s)	960
BseDI	CCNNGG	7 cut(s)	174, 295, 325, 469, 493, 719, 1411
BseLI	CCNNNNNNNGG	2 cut(s)	1202, 1561
BseMI	GCAATG	2 cut(s)	307, 1482
BseMII	CTCAG	7 cut(s)	95, 345, 1257, 1258, 1273, 1551, 1679
BseNI	ACTGG	4 cut(s)	199, 638, 1313, 1679
BseRI	GAGGAG	1 cut(s)	1142
BseSI	GKGCMC	1 cut(s)	1552
BseX3I	CGGCCG	1 cut(s)	1528
BseXI	GCAGC	5 cut(s)	44, 77, 436, 538, 991
BseYI	CCCAGC	1 cut(s)	975
Bsh1236I	CGCG	3 cut(s)	129, 1179, 1577
Bsh1285I	CGRYCG	1 cut(s)	1531
BshNI	GGYRCC	3 cut(s)	390, 876, 1248
BshVI	ATCGAT	1 cut(s)	960
BsiEI	CGRYCG	1 cut(s)	1531
BsiHKAI	GWGCWC	1 cut(s)	1646
BsiSI	CCGG	3 cut(s)	921, 1527, 1531
BslFI	GGGAC	5 cut(s)	191, 555, 848, 1002, 1428
BslI	CCNNNNNNNGG	2 cut(s)	1202, 1561
BsmAI	GTCTC	4 cut(s)	143, 1087, 1124, 1622
BsmFI	GGGAC	5 cut(s)	191, 555, 848, 1002, 1428
Bsp1286I	GDGCHC	2 cut(s)	1552, 1646
Bsp143I	GATC	6 cut(s)	112, 961, 1055, 1149, 1588, 1661
Bsp1720I	GCTNAGC	2 cut(s)	6, 61
BspACI	CCGC	6 cut(s)	127, 142, 158, 394, 1408, 1546
BspCNI	CTCAG	7 cut(s)	94, 346, 1257, 1258, 1272, 1550, 1678
BspDI	ATCGAT	1 cut(s)	960
BspFNI	CGCG	3 cut(s)	129, 1179, 1577
BspLI	GGNNCC	5 cut(s)	392, 791, 836, 878, 1250
BspOI	GCTAGC	1 cut(s)	1464
BspPI	GGATC	1 cut(s)	1157
BspQI	GCTCTTC	1 cut(s)	1427
BspT107I	GGYRCC	3 cut(s)	390, 876, 1248
BsrDI	GCAATG	2 cut(s)	307, 1482
BsrFI	RCCGGY	2 cut(s)	920, 1526
BsrI	ACTGG	4 cut(s)	199, 638, 1313, 1679
BssAI	RCCGGY	2 cut(s)	920, 1526
BssECI	CCNNGG	7 cut(s)	174, 295, 325, 469, 493, 719, 1411
BssMI	GATC	6 cut(s)	112, 961, 1055, 1149, 1588, 1661
BssNI	GRCGYC	3 cut(s)	391, 1030, 1185
BssT1I	CCWWGG	1 cut(s)	295
Bst2UI	CCWGG	7 cut(s)	175, 188, 327, 721, 839, 1385, 1412
Bst4CI	ACNGT	5 cut(s)	319, 650, 713, 1301, 1633
Bst6I	CTCTTC	3 cut(s)	53, 432, 1427
BstACI	GRCGYC	3 cut(s)	391, 1030, 1185
BstDSI	CCRYGG	2 cut(s)	469, 493
BstEII	GGTNACC	2 cut(s)	650, 740
BstFNI	CGCG	3 cut(s)	129, 1179, 1577
BstH2I	RGCGCY	2 cut(s)	394, 1266
BstHHI	GCGC	3 cut(s)	393, 1181, 1265
BstKTI	GATC	6 cut(s)	115, 964, 1058, 1152, 1591, 1664
BstMAI	GTCTC	4 cut(s)	143, 1087, 1124, 1622
BstMBI	GATC	6 cut(s)	112, 961, 1055, 1149, 1588, 1661
BstMCI	CGRYCG	1 cut(s)	1531
BstMWI	GCNNNNNNNGC	2 cut(s)	212, 617
BstNI	CCWGG	7 cut(s)	175, 188, 327, 721, 839, 1385, 1412
BstPAI	GACNNNNGTC	1 cut(s)	1538
BstPI	GGTNACC	2 cut(s)	650, 740
BstSCI	CCNGG	7 cut(s)	173, 186, 325, 719, 837, 1383, 1410
BstSFI	CTRYAG	2 cut(s)	12, 1297
BstSLI	GKGCMC	1 cut(s)	1552
BstUI	CGCG	3 cut(s)	129, 1179, 1577
BstV1I	GCAGC	5 cut(s)	44, 77, 436, 538, 991
BstV2I	GAAGAC	2 cut(s)	1180, 1647
BstXI	CCANNNNNNTGG	2 cut(s)	206, 302
BstZI	CGGCCG	1 cut(s)	1528
Bsu15I	ATCGAT	1 cut(s)	960
BsuI	GTATCC	1 cut(s)	1466
BsuTUI	ATCGAT	1 cut(s)	960
BtgI	CCRYGG	2 cut(s)	469, 493
BtrI	CACGTC	2 cut(s)	803, 1561
BtsI	GCAGTG	1 cut(s)	1452
BtsIMutI	CAGTG	3 cut(s)	206, 1306, 1452
CfoI	GCGC	3 cut(s)	393, 1181, 1265
Cfr10I	RCCGGY	2 cut(s)	920, 1526
Cfr13I	GGNCC	7 cut(s)	636, 790, 835, 841, 1405, 1533, 1564
ClaI	ATCGAT	1 cut(s)	960
CseI	GACGC	1 cut(s)	594
Csp6I	GTAC	4 cut(s)	1249, 1480, 1579, 1615
CviAII	CATG	3 cut(s)	860, 1325, 1442
CviQI	GTAC	4 cut(s)	1249, 1480, 1579, 1615
DinI	GGCGCC	1 cut(s)	392
DpnI	GATC	6 cut(s)	114, 963, 1057, 1151, 1590, 1663
DpnII	GATC	6 cut(s)	112, 961, 1055, 1149, 1588, 1661
DrdI	GACNNNNNNGTC	4 cut(s)	405, 480, 504, 1403
DseDI	GACNNNNNNGTC	4 cut(s)	405, 480, 504, 1403
EaeI	YGGCCR	2 cut(s)	1381, 1528
EagI	CGGCCG	1 cut(s)	1528
Eam1104I	CTCTTC	3 cut(s)	53, 432, 1427
EarI	CTCTTC	3 cut(s)	53, 432, 1427
EciI	GGCGGA	1 cut(s)	1397
Ecl136II	GAGCTC	1 cut(s)	1644
EclXI	CGGCCG	1 cut(s)	1528
Eco130I	CCWWGG	1 cut(s)	295
Eco147I	AGGCCT	1 cut(s)	1171
Eco24I	GRGCYC	1 cut(s)	1646
Eco32I	GATATC	1 cut(s)	685
Eco47I	GGWCC	6 cut(s)	636, 835, 841, 1405, 1533, 1564
Eco47III	AGCGCT	1 cut(s)	1264
Eco52I	CGGCCG	1 cut(s)	1528
Eco53kI	GAGCTC	1 cut(s)	1644
Eco57I	CTGAAG	3 cut(s)	174, 968, 1129
Eco91I	GGTNACC	2 cut(s)	650, 740
EcoICRI	GAGCTC	1 cut(s)	1644
EcoO65I	GGTNACC	2 cut(s)	650, 740
EcoRII	CCWGG	7 cut(s)	173, 186, 325, 719, 837, 1383, 1410
EcoRV	GATATC	1 cut(s)	685
EcoT14I	CCWWGG	1 cut(s)	295
EcoT38I	GRGCYC	1 cut(s)	1646
EgeI	GGCGCC	1 cut(s)	392
EheI	GGCGCC	1 cut(s)	392
ErhI	CCWWGG	1 cut(s)	295
FaeI	CATG	3 cut(s)	863, 1328, 1445
FaiI	YATR	8 cut(s)	14, 288, 444, 513, 861, 1326, 1427, 1443
FaqI	GGGAC	5 cut(s)	191, 555, 848, 1002, 1428
FatI	CATG	3 cut(s)	859, 1324, 1441
FauI	CCCGC	3 cut(s)	134, 151, 1539
FblI	GTMKAC	3 cut(s)	484, 784, 1332
Fnu4HI	GCNGC	6 cut(s)	58, 66, 394, 425, 527, 980
FriOI	GRGCYC	1 cut(s)	1646
Fsp4HI	GCNGC	6 cut(s)	58, 66, 394, 425, 527, 980
FspBI	CTAG	4 cut(s)	110, 563, 1356, 1461
GlaI	GCGC	3 cut(s)	392, 1180, 1264
GluI	GCNGC	6 cut(s)	58, 66, 394, 425, 527, 980
GsaI	CCCAGC	1 cut(s)	979
HaeII	RGCGCY	2 cut(s)	394, 1266
HapII	CCGG	3 cut(s)	921, 1527, 1531
HgaI	GACGC	1 cut(s)	594
HhaI	GCGC	3 cut(s)	393, 1181, 1265
Hin1I	GRCGYC	3 cut(s)	391, 1030, 1185
Hin1II	CATG	3 cut(s)	863, 1328, 1445
Hin6I	GCGC	3 cut(s)	391, 1179, 1263
HinP1I	GCGC	3 cut(s)	391, 1179, 1263
HincII	GTYRAC	2 cut(s)	485, 785
HindII	GTYRAC	2 cut(s)	485, 785
HinfI	GANTC	5 cut(s)	170, 726, 781, 947, 1606
HpaII	CCGG	3 cut(s)	921, 1527, 1531
HphI	GGTGA	4 cut(s)	13, 611, 662, 956
Hpy166II	GTNNAC	7 cut(s)	413, 473, 485, 497, 785, 806, 1333
Hpy188I	TCNGA	5 cut(s)	364, 593, 954, 1154, 1668
Hpy188III	TCNNGA	6 cut(s)	335, 680, 1034, 1147, 1492, 1659
Hpy8I	GTNNAC	7 cut(s)	413, 473, 485, 497, 785, 806, 1333
Hpy99I	CGWCG	5 cut(s)	588, 650, 789, 1187, 1562
HpyAV	CCTTC	8 cut(s)	257, 267, 571, 590, 861, 887, 1182, 1450
HpyCH4III	ACNGT	5 cut(s)	319, 650, 713, 1301, 1633
HpyCH4IV	ACGT	5 cut(s)	802, 1030, 1185, 1338, 1560
HpyCH4V	TGCA	2 cut(s)	1445, 1453
HpyF10VI	GCNNNNNNNGC	2 cut(s)	212, 617
HpySE526I	ACGT	5 cut(s)	802, 1030, 1185, 1338, 1560
Hsp92I	GRCGYC	3 cut(s)	391, 1030, 1185
Hsp92II	CATG	3 cut(s)	863, 1328, 1445
HspAI	GCGC	3 cut(s)	391, 1179, 1263
KasI	GGCGCC	1 cut(s)	390
KpnI	GGTACC	1 cut(s)	1252
KroI	GCCGGC	2 cut(s)	920, 1526
KroNI	GCCGGC	2 cut(s)	922, 1528
Kzo9I	GATC	6 cut(s)	112, 961, 1055, 1149, 1588, 1661
LguI	GCTCTTC	1 cut(s)	1427
LmnI	GCTCC	2 cut(s)	123, 870
Lsp1109I	GCAGC	5 cut(s)	44, 77, 436, 538, 991
LweI	GCATC	2 cut(s)	597, 1218
MaeI	CTAG	4 cut(s)	110, 563, 1356, 1461
MaeII	ACGT	5 cut(s)	802, 1030, 1185, 1338, 1560
MaeIII	GTNAC	6 cut(s)	625, 650, 713, 740, 944, 1139
MalI	GATC	6 cut(s)	114, 963, 1057, 1151, 1590, 1663
MboI	GATC	6 cut(s)	112, 961, 1055, 1149, 1588, 1661
MhlI	GDGCHC	2 cut(s)	1552, 1646
MlsI	TGGCCA	1 cut(s)	1383
MluCI	AATT	2 cut(s)	225, 1011
MluI	ACGCGT	1 cut(s)	1575
MluNI	TGGCCA	1 cut(s)	1383
Mly113I	GGCGCC	1 cut(s)	391
MlyI	GAGTC	4 cut(s)	179, 790, 941, 1600
Mox20I	TGGCCA	1 cut(s)	1383
MroNI	GCCGGC	2 cut(s)	920, 1526
MscI	TGGCCA	1 cut(s)	1383
MseI	TTAA	3 cut(s)	759, 1230, 1515
Msp20I	TGGCCA	1 cut(s)	1383
MspA1I	CMGCKG	1 cut(s)	57
MspI	CCGG	3 cut(s)	921, 1527, 1531
MspR9I	CCNGG	7 cut(s)	175, 188, 327, 721, 839, 1385, 1412
MvaI	CCWGG	7 cut(s)	175, 188, 327, 721, 839, 1385, 1412
MvnI	CGCG	3 cut(s)	129, 1179, 1577
MwoI	GCNNNNNNNGC	2 cut(s)	212, 617
NaeI	GCCGGC	2 cut(s)	922, 1528
NarI	GGCGCC	1 cut(s)	391
NdeII	GATC	6 cut(s)	112, 961, 1055, 1149, 1588, 1661
NgoMIV	GCCGGC	2 cut(s)	920, 1526
NheI	GCTAGC	1 cut(s)	1460
NlaIII	CATG	3 cut(s)	863, 1328, 1445
NlaIV	GGNNCC	5 cut(s)	392, 791, 836, 878, 1250
NmuCI	GTSAC	3 cut(s)	625, 650, 944
PceI	AGGCCT	1 cut(s)	1171
PciSI	GCTCTTC	1 cut(s)	1427
PcsI	WCGNNNNNNNCGW	1 cut(s)	490
PdiI	GCCGGC	2 cut(s)	922, 1528
PfeI	GAWTC	1 cut(s)	726
PflFI	GACNNNGTC	1 cut(s)	1562
PkrI	GCNGC	6 cut(s)	59, 67, 395, 426, 528, 981
PleI	GAGTC	4 cut(s)	178, 789, 941, 1600
PluTI	GGCGCC	1 cut(s)	394
PpsI	GAGTC	4 cut(s)	178, 789, 941, 1600
PshAI	GACNNNNGTC	1 cut(s)	1538
Psp124BI	GAGCTC	1 cut(s)	1646
Psp6I	CCWGG	7 cut(s)	173, 186, 325, 719, 837, 1383, 1410
PspEI	GGTNACC	2 cut(s)	650, 740
PspFI	CCCAGC	1 cut(s)	975
PspGI	CCWGG	7 cut(s)	173, 186, 325, 719, 837, 1383, 1410
PspN4I	GGNNCC	5 cut(s)	392, 791, 836, 878, 1250
PspPI	GGNCC	7 cut(s)	636, 790, 835, 841, 1405, 1533, 1564
PsyI	GACNNNGTC	1 cut(s)	1562
PvuII	CAGCTG	1 cut(s)	57
RsaI	GTAC	4 cut(s)	1250, 1481, 1580, 1616
RsaNI	GTAC	4 cut(s)	1249, 1480, 1579, 1615
SacI	GAGCTC	1 cut(s)	1646
SalI	GTCGAC	2 cut(s)	483, 783
SapI	GCTCTTC	1 cut(s)	1427
SaqAI	TTAA	3 cut(s)	759, 1230, 1515
SatI	GCNGC	6 cut(s)	58, 66, 394, 425, 527, 980
Sau3AI	GATC	6 cut(s)	112, 961, 1055, 1149, 1588, 1661
Sau96I	GGNCC	7 cut(s)	636, 790, 835, 841, 1405, 1533, 1564
SchI	GAGTC	4 cut(s)	179, 790, 941, 1600
ScrFI	CCNGG	7 cut(s)	175, 188, 327, 721, 839, 1385, 1412
SduI	GDGCHC	2 cut(s)	1552, 1646
SfaNI	GCATC	2 cut(s)	597, 1218
SfcI	CTRYAG	2 cut(s)	12, 1297
SfoI	GGCGCC	1 cut(s)	392
SinI	GGWCC	6 cut(s)	636, 835, 841, 1405, 1533, 1564
SmlI	CTYRAG	1 cut(s)	1610
SmoI	CTYRAG	1 cut(s)	1610
Sse9I	AATT	2 cut(s)	225, 1011
SseBI	AGGCCT	1 cut(s)	1171
SsiI	CCGC	6 cut(s)	127, 142, 158, 394, 1408, 1546
SspDI	GGCGCC	1 cut(s)	390
SspI	AATATT	1 cut(s)	1162
SspMI	CTAG	4 cut(s)	110, 563, 1356, 1461
SstI	GAGCTC	1 cut(s)	1646
StuI	AGGCCT	1 cut(s)	1171
StyD4I	CCNGG	7 cut(s)	173, 186, 325, 719, 837, 1383, 1410
StyI	CCWWGG	1 cut(s)	295
TaaI	ACNGT	5 cut(s)	319, 650, 713, 1301, 1633
TaiI	ACGT	5 cut(s)	805, 1033, 1188, 1341, 1563
TaqI	TCGA	7 cut(s)	86, 484, 583, 784, 960, 1044, 1591
TasI	AATT	2 cut(s)	225, 1011
TatI	WGTACW	2 cut(s)	1479, 1614
TauI	GCSGC	1 cut(s)	396
TfiI	GAWTC	1 cut(s)	726
Tru1I	TTAA	3 cut(s)	759, 1230, 1515
Tru9I	TTAA	3 cut(s)	759, 1230, 1515
TscAI	CASTG	3 cut(s)	206, 1313, 1452
TseFI	GTSAC	3 cut(s)	625, 650, 944
TseI	GCWGC	5 cut(s)	57, 65, 424, 526, 979
Tsp45I	GTSAC	3 cut(s)	625, 650, 944
TspDTI	ATGAA	4 cut(s)	381, 1030, 1341, 1414
TspRI	CASTG	3 cut(s)	206, 1313, 1452
Tth111I	GACNNNGTC	1 cut(s)	1562
VpaK11BI	GGWCC	6 cut(s)	636, 835, 841, 1405, 1533, 1564
XcmI	CCANNNNNNNNNTGG	1 cut(s)	800
XmiI	GTMKAC	3 cut(s)	484, 784, 1332
XspI	CTAG	4 cut(s)	110, 563, 1356, 1461
ZraI	GACGTC	2 cut(s)	1031, 1186

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.