Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000311

Physical Location & Seq

Genomic Coordinates Forward (+)

51339462 .. 51341311

Gene Structure 1850 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ25847

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGGCTAAGCCGTTACAGCTTGCTATTCCTCTTTGTCTGGTACTACTTAGTTTCCTCTTTCACCATGAATGCTTAGCAGCTCGCCCGCAATTTGAATCCAACCAGCAAAATGAGTGCCAAATCGATCAGCTCCAAGCCCGCGAACCTGATATTCAGATCGACTGTGAAGCTGGTAGGATTGAGTCATGGGATCACTACCAGAATGATTTCCAGTGCACCGGCGTTGCGGCTCAACGAGTCACCATTGAACCCAATGGCCTACACTTGCCTTCTTACACACACTCTCCTCAACTCATGTACATCGTCAAAGGTTGGGGTGTGATGATGACTGCATTGCCTGGCTGTCCTGAGACTTTCGAATTGTCTCAAGGTTCTCAACAAGGACAAGAAGAGGGGCAAGGCTTCGACGATTTAGAACGCCATCAGAAGGTTCGGCTCATCGGAGAGGGTGACATCATTGCTATTCCTCCTGGGATTGTCCACTGGGTTCACAACAATGGTAATTCACCACTTGTTGCCGTTAGTCTTCTCGACACTGGCAACGACCTTAACCAGCTTGACCGAAACCCCAGGAGGTTCTATCTTGCGGGTAACCCAGCAGATGAGTTTAACCAGCACGAAGGAGAAGGCATAAGTCAGCAGAGACGCCATTCGGGTCAGGGATCAAACAACAATAACATCTTCGCAGGCTTTGACGCTAGCCTCCTTGCAGACGCTCTCAATGTAGACATCGAAACAGCCATGAAAGTTCAAGGCCAGAATGATCAAACACGAAGCCAAATCGTGAGAGTGGAGGGAAAATTTGGTTTCCTCCACCCACCAATTAGGTCATCACATGCGCAGCGAACCCAACAGGAACAACAAGATGAGCAGCAGGGACAGCAGGGAAGACATGACAATGGTCTTGGGGAGACATTGTGCAACATTGCTCTAAAAGGGTACCTTGGTGACCCTAGACGTGCGGACATTTACACGCCACAAGCTGGTCACATCAATATCCTCAACAGCAATGATATGCCTATCCTTAAGCAAATGTCCCTCAGTGCCGAGACCGGTTTCTTGTACAATGCAAGTTCCTATATACATAACATTTTGTTTATGTATTCATTTGCTAATGCTATCTATAGCCCACATTGGAACCTCTTTGCACATGAAATATTCTACGTGATCAGAGGAAGTGCTAGAGTACAGGTGGTAAATGACAATGGCGAGGCCATATTGGACGATGAGGTCCGCGAGGGTCAGTTGTTTATAGTCCCGCATAACCACGCAGTCTTGCAGAAGGCTGTTGACAATCAGGGATTCGAATACATTGCATTCAAGACGCAGGACAATGCGGTCATCAACACTATGGCTGGCCGGACCTCGGTCTTGAGGGCACTGCCGGATAATGTGCTTGCAAATGCGTACCAAATTTCTCAAGAAGAGGCCAGGATGCTGAAGTACGAGAGGCAGGAGACTCTTGTATTGAGCTCATCAAGTTCCTCCTATAGTAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009791 GO:0009987 GO:0010033 GO:0010154 GO:0010431 GO:0021700 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033095 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045735 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071695 GO:0097305 GO:0097306 GO:0097708 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

499

Amino Acids

55.79

Weight (kDa)

5.19

Isoelectric Point (pI)

50.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	46 - 200	7.8e-25	Cupin
Cupin_1	PF00190	316 - 477	4.6e-32	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03880 AT1G03890 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT5G44120 AT5G44120 AT5G44120
fragaria_vesca	FvH4_2g21390 FvH4_2g21390 FvH4_2g21400 FvH4_2g21410 FvH4_2g21410 FvH4_2g21410 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21440 FvH4_3g19080
malus_domestica	MD01G1024700.v1.1 MD05G1196800.v1.1 MD05G1196900.v1.1 MD17G1078200.v1.1
prunus_persica	Prupe.8G223300_v2.0.a1 Prupe.8G223400_v2.0.a1 Prupe.8G223400_v2.0.a1
pyrus_communis	pycom05g18380 pycom05g18390
rosa_chinensis	RchiOBHm_Chr6g0287991 RchiOBHm_Chr6g0288001 RchiOBHm_Chr6g0288021 RchiOBHm_Chr6g0288031 RchiOBHm_Chr6g0288041 RchiOBHm_Chr6g0288051 RchiOBHm_Chr6g0288071
rosa_laevigata	RLG00000012441 RLG00000012443 RLG00000012444 RLG00000012446 RLG00000012447 RLG00000012448
rosa_multiflora	Rmu_co8147412.1_g000001 Rmu_co8487931.1_g000001 Rmu_co8505755.1_g000001 Rmu_sc0001117.1_g000003 Rmu_sc0001117.1_g000005 Rmu_sc0001117.1_g000011 Rmu_sc0001117.1_g000013 Rmu_sc0005266.1_g000010 Rmu_sc0010960.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252330 Rroxscaffold_7G00180530 Rroxscaffold_7G00180550 Rroxscaffold_7G00180560 Rroxscaffold_7G00180570 Rroxscaffold_7G00180580 Rroxscaffold_7G00180590
rosa_rugosa	Rorug06G0041100 Rorug06G0041200 Rorug06G0041200 Rorug06G0041400 Rorug06G0193700 Rorug06G0193700 Rorug06G0193700 Rorug06G0193800 Rorug06G0193800 Rorug06G0193900 Rorug06G0194000 Rorug06G0194100
rosa_samantha	Rh6AG303300 Rh6AG303400 Rh6AG303500 Rh6AG303700 Rh6AG303800 Rh6AG303900 Rh6AG304100 Rh6AG304200 Rh6BG309500 Rh6BG309600 Rh6BG309700 Rh6BG309900 Rh6BG310000 Rh6BG310100 Rh6BG310200 Rh6CG299600 Rh6CG299800 Rh6CG300000 Rh6CG300200 Rh6CG300300 Rh6CG317100 Rh6CG317300 Rh6CG317500 Rh6CG317700 Rh6CG317800 Rh6CG318200 Rh6DG302000 Rh6DG302100 Rh6DG302300 Rh6DG302500 Rh6DG302600 Rh6DG302700 Rh6DG303100
rosa_wichuraiana	Rw6G026230 Rw6G026240 Rw6G026260 Rw6G026280 Rw6G026300 Rw6G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1229, 1337
Acc16I	TGCGCA	1 cut(s)	840
Acc65I	GGTACC	1 cut(s)	939
AccB1I	GGYRCC	1 cut(s)	939
AccB7I	CCANNNNNTGG	1 cut(s)	983
AccI	GTMKAC	1 cut(s)	726
AccII	CGCG	2 cut(s)	141, 1236
AciI	CCGC	8 cut(s)	86, 139, 227, 587, 962, 1234, 1259, 1337
AclWI	GGATC	2 cut(s)	198, 670
AcoI	YGGCCR	1 cut(s)	1357
AcsI	RAATTY	2 cut(s)	800, 1413
AcuI	CTGAAG	1 cut(s)	1460
AcyI	GRCGYC	1 cut(s)	646
AfaI	GTAC	7 cut(s)	42, 299, 941, 1064, 1188, 1409, 1445
AfiI	CCNNNNNNNGG	3 cut(s)	427, 983, 1366
AflII	CTTAAG	1 cut(s)	1025
AgeI	ACCGGT	1 cut(s)	1052
AgsI	TTSAA	4 cut(s)	95, 248, 752, 1321
AjiI	CACGTC	1 cut(s)	959
AjnI	CCWGG	4 cut(s)	337, 469, 569, 1430
AluBI	AGCT	7 cut(s)	19, 80, 130, 170, 556, 983, 1473
AluI	AGCT	7 cut(s)	19, 80, 130, 170, 556, 983, 1473
Alw21I	GWGCWC	2 cut(s)	218, 1475
Alw26I	GTCTC	6 cut(s)	344, 369, 637, 905, 1043, 1451
Alw44I	GTGCAC	1 cut(s)	214
AlwI	GGATC	2 cut(s)	198, 670
AoxI	GGCC	5 cut(s)	256, 754, 1212, 1357, 1428
ApaLI	GTGCAC	1 cut(s)	214
ApeKI	GCWGC	3 cut(s)	77, 841, 871
ApoI	RAATTY	2 cut(s)	800, 1413
AsiGI	ACCGGT	1 cut(s)	1052
Asp700I	GAANNNNTTC	1 cut(s)	206
Asp718I	GGTACC	1 cut(s)	939
AspLEI	GCGC	1 cut(s)	841
AspS9I	GGNCC	2 cut(s)	1231, 1362
AsuHPI	GGTGA	5 cut(s)	53, 232, 461, 498, 959
AsuII	TTCGAA	2 cut(s)	357, 1305
AsuNHI	GCTAGC	1 cut(s)	698
AvaII	GGWCC	2 cut(s)	1231, 1362
BaeGI	GKGCMC	2 cut(s)	218, 1381
BaeI	ACNNNNGTAYC	2 cut(s)	931, 964
BanI	GGYRCC	1 cut(s)	939
BanII	GRGCYC	1 cut(s)	1475
BbsI	GAAGAC	2 cut(s)	518, 895
Bbv12I	GWGCWC	2 cut(s)	218, 1475
BbvI	GCAGC	3 cut(s)	89, 853, 883
BccI	CCATC	1 cut(s)	429
BceAI	ACGGC	1 cut(s)	503
BcgI	CGANNNNNNTGC	2 cut(s)	1295, 1329
BciT130I	CCWGG	4 cut(s)	339, 471, 571, 1432
BclI	TGATCA	2 cut(s)	763, 1167
BcoDI	GTCTC	6 cut(s)	344, 369, 637, 905, 1043, 1451
BfaI	CTAG	3 cut(s)	699, 954, 1182
BfmI	CTRYAG	2 cut(s)	1123, 1489
BfrI	CTTAAG	1 cut(s)	1025
BisI	GCNGC	4 cut(s)	78, 228, 842, 872
BlpI	GCTNAGC	2 cut(s)	6, 73
BlsI	GCNGC	4 cut(s)	79, 229, 843, 873
Bme1390I	CCNGG	4 cut(s)	339, 471, 571, 1432
Bme18I	GGWCC	2 cut(s)	1231, 1362
BmgBI	CACGTC	1 cut(s)	959
BmgT120I	GGNCC	2 cut(s)	1231, 1362
BmiI	GGNNCC	2 cut(s)	941, 1139
BmrFI	CCNGG	4 cut(s)	339, 471, 571, 1432
BmrI	ACTGGG	1 cut(s)	493
BmsI	GCATC	1 cut(s)	1425
BmtI	GCTAGC	1 cut(s)	702
BmuI	ACTGGG	1 cut(s)	493
BoxI	GACNNNNGTC	2 cut(s)	900, 1367
BpiI	GAAGAC	2 cut(s)	518, 895
Bpu1102I	GCTNAGC	2 cut(s)	6, 73
Bpu14I	TTCGAA	2 cut(s)	357, 1305
BpuEI	CTTGAG	3 cut(s)	351, 1393, 1404
Bsa29I	ATCGAT	1 cut(s)	123
BsaAI	YACGTR	1 cut(s)	1165
BsaHI	GRCGYC	1 cut(s)	646
BsaI	GGTCTC	1 cut(s)	1043
BsaJI	CCNNGG	4 cut(s)	470, 569, 943, 1365
BsaWI	WCCGGW	1 cut(s)	1052
BsaXI	ACNNNNNCTCC	4 cut(s)	268, 298, 902, 932
Bsc4I	CCNNNNNNNGG	3 cut(s)	427, 983, 1366
Bse118I	RCCGGY	2 cut(s)	218, 1052
Bse1I	ACTGG	3 cut(s)	211, 488, 541
Bse3DI	GCAATG	5 cut(s)	332, 456, 924, 1015, 1311
BseBI	CCWGG	4 cut(s)	339, 471, 571, 1432
BseCI	ATCGAT	1 cut(s)	123
BseDI	CCNNGG	4 cut(s)	470, 569, 943, 1365
BseGI	GGATG	1 cut(s)	1440
BseLI	CCNNNNNNNGG	3 cut(s)	427, 983, 1366
BseMI	GCAATG	5 cut(s)	332, 456, 924, 1015, 1311
BseMII	CTCAG	2 cut(s)	339, 1054
BseNI	ACTGG	3 cut(s)	211, 488, 541
BseRI	GAGGAG	1 cut(s)	276
BseSI	GKGCMC	2 cut(s)	218, 1381
BseXI	GCAGC	3 cut(s)	89, 853, 883
BseYI	CCCAGC	1 cut(s)	595
Bsh1236I	CGCG	2 cut(s)	141, 1236
BshFI	GGCC	5 cut(s)	258, 756, 1214, 1359, 1430
BshNI	GGYRCC	1 cut(s)	939
BshTI	ACCGGT	1 cut(s)	1052
BshVI	ATCGAT	1 cut(s)	123
BsiHKAI	GWGCWC	2 cut(s)	218, 1475
BsiSI	CCGG	4 cut(s)	219, 1053, 1360, 1385
BslFI	GGGAC	3 cut(s)	891, 1021, 1241
BslI	CCNNNNNNNGG	3 cut(s)	427, 983, 1366
BsmAI	GTCTC	6 cut(s)	344, 369, 637, 905, 1043, 1451
BsmBI	CGTCTC	1 cut(s)	637
BsmFI	GGGAC	3 cut(s)	891, 1021, 1241
BsmI	GAATGC	2 cut(s)	74, 1316
BsnI	GGCC	5 cut(s)	258, 756, 1214, 1359, 1430
Bso31I	GGTCTC	1 cut(s)	1043
Bsp119I	TTCGAA	2 cut(s)	357, 1305
Bsp1286I	GDGCHC	3 cut(s)	218, 1381, 1475
Bsp1407I	TGTACA	2 cut(s)	297, 1062
Bsp143I	GATC	6 cut(s)	124, 156, 190, 662, 763, 1167
Bsp1720I	GCTNAGC	2 cut(s)	6, 73
BspACI	CCGC	8 cut(s)	86, 139, 227, 587, 962, 1234, 1259, 1337
BspANI	GGCC	5 cut(s)	258, 756, 1214, 1359, 1430
BspCNI	CTCAG	2 cut(s)	340, 1053
BspDI	ATCGAT	1 cut(s)	123
BspFNI	CGCG	2 cut(s)	141, 1236
BspLI	GGNNCC	2 cut(s)	941, 1139
BspOI	GCTAGC	1 cut(s)	702
BspPI	GGATC	2 cut(s)	198, 670
BspT104I	TTCGAA	2 cut(s)	357, 1305
BspT107I	GGYRCC	1 cut(s)	939
BspTI	CTTAAG	1 cut(s)	1025
BspTNI	GGTCTC	1 cut(s)	1043
BsrDI	GCAATG	5 cut(s)	332, 456, 924, 1015, 1311
BsrFI	RCCGGY	2 cut(s)	218, 1052
BsrGI	TGTACA	2 cut(s)	297, 1062
BsrI	ACTGG	3 cut(s)	211, 488, 541
BssAI	RCCGGY	2 cut(s)	218, 1052
BssECI	CCNNGG	4 cut(s)	470, 569, 943, 1365
BssMI	GATC	6 cut(s)	124, 156, 190, 662, 763, 1167
BssNI	GRCGYC	1 cut(s)	646
BssT1I	CCWWGG	1 cut(s)	943
Bst2UI	CCWGG	4 cut(s)	339, 471, 571, 1432
Bst4CI	ACNGT	1 cut(s)	164
Bst6I	CTCTTC	2 cut(s)	384, 1419
BstACI	GRCGYC	1 cut(s)	646
BstAFI	CTTAAG	1 cut(s)	1025
BstAUI	TGTACA	2 cut(s)	297, 1062
BstBAI	YACGTR	1 cut(s)	1165
BstBI	TTCGAA	2 cut(s)	357, 1305
BstC8I	GCNNGC	8 cut(s)	21, 82, 86, 139, 688, 700, 1357, 1398
BstDEI	CTNAG	5 cut(s)	6, 47, 73, 348, 1040
BstEII	GGTNACC	2 cut(s)	590, 947
BstF5I	GGATG	1 cut(s)	1440
BstFNI	CGCG	2 cut(s)	141, 1236
BstHHI	GCGC	1 cut(s)	841
BstKTI	GATC	6 cut(s)	127, 159, 193, 665, 766, 1170
BstMAI	GTCTC	6 cut(s)	344, 369, 637, 905, 1043, 1451
BstMBI	GATC	6 cut(s)	124, 156, 190, 662, 763, 1167
BstMWI	GCNNNNNNNGC	2 cut(s)	16, 880
BstNI	CCWGG	4 cut(s)	339, 471, 571, 1432
BstNSI	RCATGY	1 cut(s)	839
BstPAI	GACNNNNGTC	2 cut(s)	900, 1367
BstPI	GGTNACC	2 cut(s)	590, 947
BstSCI	CCNGG	4 cut(s)	337, 469, 569, 1430
BstSFI	CTRYAG	2 cut(s)	1123, 1489
BstSLI	GKGCMC	2 cut(s)	218, 1381
BstUI	CGCG	2 cut(s)	141, 1236
BstV1I	GCAGC	3 cut(s)	89, 853, 883
BstV2I	GAAGAC	2 cut(s)	518, 895
Bsu15I	ATCGAT	1 cut(s)	123
BsuRI	GGCC	5 cut(s)	258, 756, 1214, 1359, 1430
BsuTUI	ATCGAT	1 cut(s)	123
BtrI	CACGTC	1 cut(s)	959
BtsCI	GGATG	1 cut(s)	1440
BtsI	GCAGTG	1 cut(s)	1379
BtsIMutI	CAGTG	5 cut(s)	218, 481, 534, 1048, 1379
Cac8I	GCNNGC	8 cut(s)	21, 82, 86, 139, 688, 700, 1357, 1398
CfoI	GCGC	1 cut(s)	841
Cfr10I	RCCGGY	2 cut(s)	218, 1052
Cfr13I	GGNCC	2 cut(s)	1231, 1362
ClaI	ATCGAT	1 cut(s)	123
CseI	GACGC	4 cut(s)	654, 704, 722, 1333
Csp6I	GTAC	7 cut(s)	41, 298, 940, 1063, 1187, 1408, 1444
CspAI	ACCGGT	1 cut(s)	1052
CviAII	CATG	7 cut(s)	65, 186, 295, 742, 836, 893, 1151
CviQI	GTAC	7 cut(s)	41, 298, 940, 1063, 1187, 1408, 1444
DdeI	CTNAG	5 cut(s)	6, 47, 73, 348, 1040
DpnI	GATC	6 cut(s)	126, 158, 192, 664, 765, 1169
DpnII	GATC	6 cut(s)	124, 156, 190, 662, 763, 1167
DrdI	GACNNNNNNGTC	2 cut(s)	1229, 1337
DseDI	GACNNNNNNGTC	2 cut(s)	1229, 1337
EaeI	YGGCCR	1 cut(s)	1357
Eam1104I	CTCTTC	2 cut(s)	384, 1419
EarI	CTCTTC	2 cut(s)	384, 1419
Ecl136II	GAGCTC	1 cut(s)	1473
Eco130I	CCWWGG	1 cut(s)	943
Eco24I	GRGCYC	1 cut(s)	1475
Eco31I	GGTCTC	1 cut(s)	1043
Eco47I	GGWCC	2 cut(s)	1231, 1362
Eco53kI	GAGCTC	1 cut(s)	1473
Eco57I	CTGAAG	1 cut(s)	1460
Eco91I	GGTNACC	2 cut(s)	590, 947
EcoICRI	GAGCTC	1 cut(s)	1473
EcoO65I	GGTNACC	2 cut(s)	590, 947
EcoRII	CCWGG	4 cut(s)	337, 469, 569, 1430
EcoT14I	CCWWGG	1 cut(s)	943
EcoT38I	GRGCYC	1 cut(s)	1475
ErhI	CCWWGG	1 cut(s)	943
Esp3I	CGTCTC	1 cut(s)	637
FaeI	CATG	7 cut(s)	68, 189, 298, 745, 839, 896, 1154
FalI	AAGNNNNNCTT	2 cut(s)	927, 959
FaqI	GGGAC	3 cut(s)	891, 1021, 1241
FatI	CATG	7 cut(s)	64, 185, 294, 741, 835, 892, 1150
FauI	CCCGC	4 cut(s)	93, 146, 580, 1266
FbaI	TGATCA	2 cut(s)	763, 1167
FblI	GTMKAC	1 cut(s)	726
Fnu4HI	GCNGC	4 cut(s)	78, 228, 842, 872
FokI	GGATG	1 cut(s)	1447
FriOI	GRGCYC	1 cut(s)	1475
Fsp4HI	GCNGC	4 cut(s)	78, 228, 842, 872
FspBI	CTAG	3 cut(s)	699, 954, 1182
FspI	TGCGCA	1 cut(s)	840
GlaI	GCGC	1 cut(s)	840
GluI	GCNGC	4 cut(s)	78, 228, 842, 872
GsaI	CCCAGC	1 cut(s)	599
HaeIII	GGCC	5 cut(s)	258, 756, 1214, 1359, 1430
HapII	CCGG	4 cut(s)	219, 1053, 1360, 1385
HgaI	GACGC	4 cut(s)	654, 704, 722, 1333
HhaI	GCGC	1 cut(s)	841
Hin1I	GRCGYC	1 cut(s)	646
Hin1II	CATG	7 cut(s)	68, 189, 298, 745, 839, 896, 1154
Hin6I	GCGC	1 cut(s)	839
HinP1I	GCGC	1 cut(s)	839
HincII	GTYRAC	1 cut(s)	1291
HindII	GTYRAC	1 cut(s)	1291
HinfI	GANTC	5 cut(s)	95, 182, 237, 1302, 1459
HpaII	CCGG	4 cut(s)	219, 1053, 1360, 1385
HphI	GGTGA	5 cut(s)	53, 232, 461, 498, 959
Hpy166II	GTNNAC	5 cut(s)	216, 481, 490, 727, 1291
Hpy188I	TCNGA	4 cut(s)	156, 426, 443, 1172
Hpy188III	TCNNGA	6 cut(s)	347, 530, 784, 1321, 1372, 1421
Hpy8I	GTNNAC	5 cut(s)	216, 481, 490, 727, 1291
Hpy99I	CGWCG	1 cut(s)	410
HpyAV	CCTTC	5 cut(s)	279, 421, 614, 620, 1276
HpyCH4III	ACNGT	1 cut(s)	164
HpyCH4IV	ACGT	2 cut(s)	958, 1164
HpyCH4V	TGCA	9 cut(s)	216, 332, 710, 921, 1070, 1148, 1279, 1316, 1400
HpyF10VI	GCNNNNNNNGC	2 cut(s)	16, 880
HpyF3I	CTNAG	5 cut(s)	6, 47, 73, 348, 1040
HpySE526I	ACGT	2 cut(s)	958, 1164
Hsp92I	GRCGYC	1 cut(s)	646
Hsp92II	CATG	7 cut(s)	68, 189, 298, 745, 839, 896, 1154
HspAI	GCGC	1 cut(s)	839
KpnI	GGTACC	1 cut(s)	943
Ksp22I	TGATCA	2 cut(s)	763, 1167
Kzo9I	GATC	6 cut(s)	124, 156, 190, 662, 763, 1167
LmnI	GCTCC	1 cut(s)	135
Lsp1109I	GCAGC	3 cut(s)	89, 853, 883
LweI	GCATC	1 cut(s)	1425
MaeI	CTAG	3 cut(s)	699, 954, 1182
MaeII	ACGT	2 cut(s)	958, 1164
MaeIII	GTNAC	6 cut(s)	12, 238, 449, 590, 947, 986
MalI	GATC	6 cut(s)	126, 158, 192, 664, 765, 1169
MboI	GATC	6 cut(s)	124, 156, 190, 662, 763, 1167
MboII	GAAGA	5 cut(s)	401, 518, 673, 900, 1436
MhlI	GDGCHC	3 cut(s)	218, 1381, 1475
MluCI	AATT	6 cut(s)	89, 359, 502, 800, 822, 1413
MlyI	GAGTC	3 cut(s)	191, 246, 1453
MmeI	TCCRAC	1 cut(s)	123
MroXI	GAANNNNTTC	1 cut(s)	206
MseI	TTAA	3 cut(s)	549, 609, 1026
MslI	CAYNNNNRTG	2 cut(s)	495, 897
MspCI	CTTAAG	1 cut(s)	1025
MspI	CCGG	4 cut(s)	219, 1053, 1360, 1385
MspR9I	CCNGG	4 cut(s)	339, 471, 571, 1432
Mva1269I	GAATGC	2 cut(s)	74, 1316
MvaI	CCWGG	4 cut(s)	339, 471, 571, 1432
MvnI	CGCG	2 cut(s)	141, 1236
MwoI	GCNNNNNNNGC	2 cut(s)	16, 880
NdeII	GATC	6 cut(s)	124, 156, 190, 662, 763, 1167
NheI	GCTAGC	1 cut(s)	698
NlaIII	CATG	7 cut(s)	68, 189, 298, 745, 839, 896, 1154
NlaIV	GGNNCC	2 cut(s)	941, 1139
NmeAIII	GCCGAG	1 cut(s)	1072
NmuCI	GTSAC	4 cut(s)	238, 449, 947, 986
NsbI	TGCGCA	1 cut(s)	840
NspI	RCATGY	1 cut(s)	839
NspV	TTCGAA	2 cut(s)	357, 1305
PctI	GAATGC	2 cut(s)	74, 1316
PdmI	GAANNNNTTC	1 cut(s)	206
PfeI	GAWTC	2 cut(s)	95, 1302
PflMI	CCANNNNNTGG	1 cut(s)	983
PinAI	ACCGGT	1 cut(s)	1052
PkrI	GCNGC	4 cut(s)	79, 229, 843, 873
PleI	GAGTC	3 cut(s)	190, 245, 1453
PpsI	GAGTC	3 cut(s)	190, 245, 1453
Ppu21I	YACGTR	1 cut(s)	1165
PshAI	GACNNNNGTC	2 cut(s)	900, 1367
Psp124BI	GAGCTC	1 cut(s)	1475
Psp6I	CCWGG	4 cut(s)	337, 469, 569, 1430
PspEI	GGTNACC	2 cut(s)	590, 947
PspFI	CCCAGC	1 cut(s)	595
PspGI	CCWGG	4 cut(s)	337, 469, 569, 1430
PspN4I	GGNNCC	2 cut(s)	941, 1139
PspPI	GGNCC	2 cut(s)	1231, 1362
RsaI	GTAC	7 cut(s)	42, 299, 941, 1064, 1188, 1409, 1445
RsaNI	GTAC	7 cut(s)	41, 298, 940, 1063, 1187, 1408, 1444
RseI	CAYNNNNRTG	2 cut(s)	495, 897
SacI	GAGCTC	1 cut(s)	1475
SaqAI	TTAA	3 cut(s)	549, 609, 1026
SatI	GCNGC	4 cut(s)	78, 228, 842, 872
Sau3AI	GATC	6 cut(s)	124, 156, 190, 662, 763, 1167
Sau96I	GGNCC	2 cut(s)	1231, 1362
SchI	GAGTC	3 cut(s)	191, 246, 1453
ScrFI	CCNGG	4 cut(s)	339, 471, 571, 1432
SduI	GDGCHC	3 cut(s)	218, 1381, 1475
SfaNI	GCATC	1 cut(s)	1425
SfcI	CTRYAG	2 cut(s)	1123, 1489
SfuI	TTCGAA	2 cut(s)	357, 1305
SgrAI	CRCCGGYG	1 cut(s)	218
SinI	GGWCC	2 cut(s)	1231, 1362
SmiMI	CAYNNNNRTG	2 cut(s)	495, 897
SmlI	CTYRAG	4 cut(s)	366, 1025, 1372, 1419
SmoI	CTYRAG	4 cut(s)	366, 1025, 1372, 1419
Sse9I	AATT	6 cut(s)	89, 359, 502, 800, 822, 1413
SsiI	CCGC	8 cut(s)	86, 139, 227, 587, 962, 1234, 1259, 1337
SspI	AATATT	1 cut(s)	1158
SspMI	CTAG	3 cut(s)	699, 954, 1182
SstI	GAGCTC	1 cut(s)	1475
StyD4I	CCNGG	4 cut(s)	337, 469, 569, 1430
StyI	CCWWGG	1 cut(s)	943
TaaI	ACNGT	1 cut(s)	164
TaiI	ACGT	2 cut(s)	961, 1167
TaqI	TCGA	7 cut(s)	123, 159, 357, 405, 531, 732, 1305
TaqII	GACCGA	2 cut(s)	576, 1357
TasI	AATT	6 cut(s)	89, 359, 502, 800, 822, 1413
TatI	WGTACW	3 cut(s)	297, 1062, 1186
TauI	GCSGC	1 cut(s)	230
TfiI	GAWTC	2 cut(s)	95, 1302
Tru1I	TTAA	3 cut(s)	549, 609, 1026
Tru9I	TTAA	3 cut(s)	549, 609, 1026
TscAI	CASTG	5 cut(s)	218, 488, 541, 1048, 1386
TseFI	GTSAC	4 cut(s)	238, 449, 947, 986
TseI	GCWGC	3 cut(s)	77, 841, 871
Tsp45I	GTSAC	4 cut(s)	238, 449, 947, 986
TspDTI	ATGAA	4 cut(s)	81, 758, 1095, 1167
TspRI	CASTG	5 cut(s)	218, 488, 541, 1048, 1386
Van91I	CCANNNNNTGG	1 cut(s)	983
Vha464I	CTTAAG	1 cut(s)	1025
VneI	GTGCAC	1 cut(s)	214
VpaK11BI	GGWCC	2 cut(s)	1231, 1362
XapI	RAATTY	2 cut(s)	800, 1413
XceI	RCATGY	1 cut(s)	839
XmiI	GTMKAC	1 cut(s)	726
XmnI	GAANNNNTTC	1 cut(s)	206
XspI	CTAG	3 cut(s)	699, 954, 1182

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.