Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0000311

Physical Location & Seq

Genomic Coordinates Forward (+)

53860850 .. 53862718

Gene Structure 1869 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG309500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGGCTAGGTCTTTAGCTCTCTCTCTTTGCTTGCTTGTTCTCTTTCATGGCTGCTTAGCCTATCGCCAACAGTCTCAGTACAGCCAGAGAGGGCAAAATGAGTGCCAGATCAACCAGCTCCAGGCCCGCGAGCCCGACAACCGCATTGAGACTGAGGCGGGTCGGATCGAGTCATGGGACTACAACCAGGATGACTTCCAGTGCACCGGAGTCGCCGTTCAGAGAATCATCGTCGAGCGCAACGGCCTTCACTTGCCTTCATACACCAATACTCCTCGCCTTGTTTACGTTGTCCAAGGTAGGGGTCATCTAGGAATGGTGATGCCCGGCTGTCCCGAGACATTTGAGGAGTCCGAGCAATCTGACGAGGAACAACAGGGCTCGCAACAACAACCACAGCAAGGCCGACAAGGCCGCCAGCAACAGGGACGCCGACAAGGACAATATGGACGAGAAGGCCAACAGGGAGAACAAGAGAGCTTCGAACAGCTAGACCGACACCAGAGGGTGCGACGCGTCAAGGAAGGTGACGTTATCGCCATCCCCGCCGGAGTCACAACCTGGTCCTACAACGACGGTGACCAATCTCTCATTTTTGTCAGTCTTCTAGACATCAGCAACAATCACAACCAGCTTGACCAAAACCCAAGGCGATTCTATCTTGCTGGTAACCCACAAGATGAGTTCAACCAACAAGGCCAAAGCCGAGGCCAATCGAGACAACAACAAGAACAACAGGGAAGGAGCAGACGCCAACAACAGGGAAACAACAACAACAACATCTTTGCAGGATTCGACACCAGACTCCTCGCCGATGCTCTCAACATCGACCAACAGACCGCTCAGCAGCTCCAGGGACAGAACGACAACAGGCCACAGATTGTTAGGGTTCAGGGACGTCTCGACTTCATCCAGCCTCCTGAGTCAATGAGGGAGGAAAGACAACTCCAAGGACAACAAGGACAACAGGGACAACAGGGACAGAATGGCTTTGAGGAGGTATTCTGCCACATGAAGATCAAGCAGAACATCGGCAAGCCTTCATTGGCCGACGTCTTCAGCCCTCAAGCCGGTCGCATCAGCACCCTCAACGGCTTCAGCTTGCCTATTCTCAGGCACCTCCGCCTCAGTGCTGAGAGAGGCTTCTTGTACAACAATGCTATCCACAGCCCACACTGGAACTTGAATGCCCATGAGATAGTCTATGTCATCAGAGGTAGCGCCAGGGTTCAGGTGGTGAACGACAACGGCGAGACCATCTTGGACGACCAGGTCCGCCCGGGACAGCTCTTCGTCGTGCCACAGAACCACGCCGTGTTGCAGAAGGCCATGAGCAACGGATACGAGTACATTGCCTTCAAGACCGATGACAATGCCATGATCAACACTCTGGCTGGCAGGACCTCCGTCCTGCGGGCACTCCCCGACGTGGTCCTCGCCAACGCCTACCAGATGGACCGTGAGCAGGCAAGGAACCTCAAATACAACAGGCAGGAGACCCTTGCCTTGAGCTCCTCAAGGTCTTTCCAGTCACAGAGGAGTTGGTGGGCTATTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009791 GO:0009987 GO:0010033 GO:0010154 GO:0010431 GO:0021700 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033095 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045735 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071695 GO:0097305 GO:0097306 GO:0097708 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

519

Amino Acids

59.16

Weight (kDa)

6.62

Isoelectric Point (pI)

61.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	41 - 225	2e-27	Cupin
Cupin_1	PF00190	343 - 490	1.1e-39	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03880 AT1G03890 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT5G44120 AT5G44120 AT5G44120
fragaria_vesca	FvH4_2g21390 FvH4_2g21390 FvH4_2g21400 FvH4_2g21410 FvH4_2g21410 FvH4_2g21410 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21440 FvH4_3g19080
malus_domestica	MD01G1024700.v1.1 MD05G1196800.v1.1 MD05G1196900.v1.1 MD17G1078200.v1.1
prunus_persica	Prupe.8G223300_v2.0.a1 Prupe.8G223400_v2.0.a1 Prupe.8G223400_v2.0.a1
pyrus_communis	pycom05g18380 pycom05g18390
rosa_chinensis	RchiOBHm_Chr6g0287991 RchiOBHm_Chr6g0288001 RchiOBHm_Chr6g0288021 RchiOBHm_Chr6g0288031 RchiOBHm_Chr6g0288041 RchiOBHm_Chr6g0288051 RchiOBHm_Chr6g0288071
rosa_laevigata	RLG00000012441 RLG00000012443 RLG00000012444 RLG00000012446 RLG00000012447 RLG00000012448
rosa_multiflora	Rmu_co8147412.1_g000001 Rmu_co8487931.1_g000001 Rmu_co8505755.1_g000001 Rmu_sc0001117.1_g000003 Rmu_sc0001117.1_g000005 Rmu_sc0001117.1_g000011 Rmu_sc0001117.1_g000013 Rmu_sc0005266.1_g000010 Rmu_sc0010960.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252330 Rroxscaffold_7G00180530 Rroxscaffold_7G00180550 Rroxscaffold_7G00180560 Rroxscaffold_7G00180570 Rroxscaffold_7G00180580 Rroxscaffold_7G00180590
rosa_rugosa	Rorug06G0041100 Rorug06G0041200 Rorug06G0041200 Rorug06G0041400 Rorug06G0193700 Rorug06G0193700 Rorug06G0193700 Rorug06G0193800 Rorug06G0193800 Rorug06G0193900 Rorug06G0194000 Rorug06G0194100
rosa_samantha	Rh6AG303300 Rh6AG303400 Rh6AG303500 Rh6AG303700 Rh6AG303800 Rh6AG303900 Rh6AG304100 Rh6AG304200 Rh6BG309500 Rh6BG309600 Rh6BG309700 Rh6BG309900 Rh6BG310000 Rh6BG310100 Rh6BG310200 Rh6CG299600 Rh6CG299800 Rh6CG300000 Rh6CG300200 Rh6CG300300 Rh6CG317100 Rh6CG317300 Rh6CG317500 Rh6CG317700 Rh6CG317800 Rh6CG318200 Rh6DG302000 Rh6DG302100 Rh6DG302300 Rh6DG302500 Rh6DG302600 Rh6DG302700 Rh6DG303100
rosa_wichuraiana	Rw6G026230 Rw6G026240 Rw6G026260 Rw6G026280 Rw6G026300 Rw6G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1271
AatII	GACGTC	2 cut(s)	901, 1056
AccB1I	GGYRCC	1 cut(s)	1116
AccBSI	CCGCTC	1 cut(s)	842
AccII	CGCG	2 cut(s)	129, 516
AciI	CCGC	9 cut(s)	127, 142, 158, 415, 546, 840, 1123, 1276, 1414
AclWI	GGATC	1 cut(s)	173
AcoI	YGGCCR	1 cut(s)	1047
AcuI	CTGAAG	2 cut(s)	1042, 1081
AcyI	GRCGYC	4 cut(s)	430, 751, 898, 1053
AdeI	CACNNNGTG	1 cut(s)	1315
AfaI	GTAC	3 cut(s)	80, 1151, 1349
AfiI	CCNNNNNNNGG	9 cut(s)	121, 301, 401, 424, 760, 1070, 1413, 1429, 1465
AflIII	ACRYGT	1 cut(s)	514
AgsI	TTSAA	3 cut(s)	688, 1186, 1360
AjiI	CACGTC	1 cut(s)	1429
AjnI	CCWGG	6 cut(s)	120, 186, 560, 852, 1223, 1269
AloI	GAACNNNNNNTCC	2 cut(s)	201, 233
AluBI	AGCT	9 cut(s)	17, 118, 480, 490, 634, 850, 1101, 1288, 1512
AluI	AGCT	9 cut(s)	17, 118, 480, 490, 634, 850, 1101, 1288, 1512
Alw21I	GWGCWC	2 cut(s)	206, 1514
Alw26I	GTCTC	7 cut(s)	78, 143, 332, 712, 905, 1247, 1490
Alw44I	GTGCAC	1 cut(s)	202
AlwI	GGATC	1 cut(s)	173
Ama87I	CYCGRG	2 cut(s)	335, 1279
ApaLI	GTGCAC	1 cut(s)	202
ApeKI	GCWGC	2 cut(s)	51, 847
AspLEI	GCGC	2 cut(s)	240, 1223
AspS9I	GGNCC	6 cut(s)	124, 564, 1273, 1401, 1432, 1456
AsuC2I	CCSGG	3 cut(s)	327, 1280, 1281
AsuHPI	GGTGA	4 cut(s)	331, 539, 590, 1249
AsuII	TTCGAA	1 cut(s)	483
AvaI	CYCGRG	2 cut(s)	335, 1279
AvaII	GGWCC	5 cut(s)	564, 1273, 1401, 1432, 1456
BaeGI	GKGCMC	2 cut(s)	206, 1420
BanI	GGYRCC	1 cut(s)	1116
BanII	GRGCYC	3 cut(s)	135, 383, 1514
BarI	GAAGNNNNNNTAC	2 cut(s)	1340, 1372
BbsI	GAAGAC	2 cut(s)	596, 1048
Bbv12I	GWGCWC	2 cut(s)	206, 1514
BbvI	GCAGC	2 cut(s)	38, 859
BccI	CCATC	3 cut(s)	548, 1265, 1447
BceAI	ACGGC	5 cut(s)	200, 259, 1108, 1264, 1298
BcgI	CGANNNNNNTGC	6 cut(s)	193, 227, 1334, 1355, 1368, 1389
BciT130I	CCWGG	6 cut(s)	122, 188, 562, 854, 1225, 1271
BciVI	GTATCC	1 cut(s)	1334
BclI	TGATCA	1 cut(s)	1380
BcnI	CCSGG	3 cut(s)	327, 1280, 1281
BcoDI	GTCTC	7 cut(s)	78, 143, 332, 712, 905, 1247, 1490
BfaI	CTAG	4 cut(s)	6, 311, 491, 608
BfoI	RGCGCY	1 cut(s)	1224
BfuI	GTATCC	1 cut(s)	1334
BglI	GCCNNNNNGGC	1 cut(s)	411
BisI	GCNGC	3 cut(s)	52, 415, 848
BlpI	GCTNAGC	2 cut(s)	55, 843
BlsI	GCNGC	3 cut(s)	53, 416, 849
Bme1390I	CCNGG	9 cut(s)	122, 188, 327, 562, 854, 1225, 1271, 1280, 1281
Bme18I	GGWCC	5 cut(s)	564, 1273, 1401, 1432, 1456
BmeT110I	CYCGRG	2 cut(s)	335, 1279
BmgBI	CACGTC	1 cut(s)	1429
BmgT120I	GGNCC	6 cut(s)	124, 564, 1273, 1401, 1432, 1456
BmiI	GGNNCC	2 cut(s)	1118, 1475
BmrFI	CCNGG	9 cut(s)	122, 188, 327, 562, 854, 1225, 1271, 1280, 1281
BmsI	GCATC	3 cut(s)	312, 805, 1086
BoxI	GACNNNNGTC	1 cut(s)	1406
BpiI	GAAGAC	2 cut(s)	596, 1048
BpmI	CTGGAG	2 cut(s)	104, 836
Bpu1102I	GCTNAGC	2 cut(s)	55, 843
Bpu14I	TTCGAA	1 cut(s)	483
BpuEI	CTTGAG	3 cut(s)	1050, 1501, 1528
BpuMI	CCSGG	3 cut(s)	327, 1280, 1281
BsaHI	GRCGYC	4 cut(s)	430, 751, 898, 1053
BsaI	GGTCTC	2 cut(s)	1247, 1490
BsaJI	CCNNGG	7 cut(s)	295, 647, 706, 853, 949, 1224, 1279
BsaWI	WCCGGW	1 cut(s)	206
BsaXI	ACNNNNNCTCC	4 cut(s)	201, 231, 256, 286
Bsc4I	CCNNNNNNNGG	9 cut(s)	121, 301, 401, 424, 760, 1070, 1413, 1429, 1465
Bse118I	RCCGGY	1 cut(s)	1070
Bse1I	ACTGG	3 cut(s)	199, 1181, 1528
Bse3DI	GCAATG	1 cut(s)	1350
BseBI	CCWGG	6 cut(s)	122, 188, 562, 854, 1225, 1271
BseDI	CCNNGG	7 cut(s)	295, 647, 706, 853, 949, 1224, 1279
BseGI	GGATG	3 cut(s)	196, 540, 909
BseLI	CCNNNNNNNGG	9 cut(s)	121, 301, 401, 424, 760, 1070, 1413, 1429, 1465
BseMI	GCAATG	1 cut(s)	1350
BseMII	CTCAG	7 cut(s)	89, 144, 857, 912, 1125, 1126, 1141
BseNI	ACTGG	3 cut(s)	199, 1181, 1528
BseRI	GAGGAG	6 cut(s)	264, 362, 797, 1010, 1504, 1552
BseSI	GKGCMC	2 cut(s)	206, 1420
BseXI	GCAGC	2 cut(s)	38, 859
Bsh1236I	CGCG	2 cut(s)	129, 516
Bsh1285I	CGRYCG	1 cut(s)	1075
BshNI	GGYRCC	1 cut(s)	1116
BsiEI	CGRYCG	1 cut(s)	1075
BsiHKAI	GWGCWC	2 cut(s)	206, 1514
BsiHKCI	CYCGRG	2 cut(s)	335, 1279
BsiSI	CCGG	5 cut(s)	207, 327, 549, 1071, 1280
BslFI	GGGAC	8 cut(s)	191, 318, 441, 870, 909, 984, 993, 1296
BslI	CCNNNNNNNGG	9 cut(s)	121, 301, 401, 424, 760, 1070, 1413, 1429, 1465
BsmAI	GTCTC	7 cut(s)	78, 143, 332, 712, 905, 1247, 1490
BsmBI	CGTCTC	1 cut(s)	905
BsmFI	GGGAC	8 cut(s)	191, 318, 441, 870, 909, 984, 993, 1296
BsmI	GAATGC	1 cut(s)	1192
Bso31I	GGTCTC	2 cut(s)	1247, 1490
BsoBI	CYCGRG	2 cut(s)	335, 1279
Bsp119I	TTCGAA	1 cut(s)	483
Bsp1286I	GDGCHC	5 cut(s)	135, 206, 383, 1420, 1514
Bsp1407I	TGTACA	1 cut(s)	1149
Bsp143I	GATC	4 cut(s)	108, 165, 1017, 1380
Bsp1720I	GCTNAGC	2 cut(s)	55, 843
BspACI	CCGC	9 cut(s)	127, 142, 158, 415, 546, 840, 1123, 1276, 1414
BspCNI	CTCAG	7 cut(s)	88, 145, 856, 913, 1125, 1126, 1140
BspFNI	CGCG	2 cut(s)	129, 516
BspLI	GGNNCC	2 cut(s)	1118, 1475
BspPI	GGATC	1 cut(s)	173
BspQI	GCTCTTC	1 cut(s)	1295
BspT104I	TTCGAA	1 cut(s)	483
BspT107I	GGYRCC	1 cut(s)	1116
BspTNI	GGTCTC	2 cut(s)	1247, 1490
BsrBI	CCGCTC	1 cut(s)	842
BsrDI	GCAATG	1 cut(s)	1350
BsrFI	RCCGGY	1 cut(s)	1070
BsrGI	TGTACA	1 cut(s)	1149
BsrI	ACTGG	3 cut(s)	199, 1181, 1528
BssAI	RCCGGY	1 cut(s)	1070
BssECI	CCNNGG	7 cut(s)	295, 647, 706, 853, 949, 1224, 1279
BssMI	GATC	4 cut(s)	108, 165, 1017, 1380
BssNI	GRCGYC	4 cut(s)	430, 751, 898, 1053
BssT1I	CCWWGG	3 cut(s)	295, 647, 949
Bst2UI	CCWGG	6 cut(s)	122, 188, 562, 854, 1225, 1271
Bst4CI	ACNGT	3 cut(s)	72, 578, 1460
Bst6I	CTCTTC	1 cut(s)	1295
BstACI	GRCGYC	4 cut(s)	430, 751, 898, 1053
BstAUI	TGTACA	1 cut(s)	1149
BstBI	TTCGAA	1 cut(s)	483
BstDEI	CTNAG	8 cut(s)	55, 75, 153, 843, 921, 1112, 1127, 1134
BstEII	GGTNACC	2 cut(s)	578, 668
BstF5I	GGATG	3 cut(s)	196, 540, 909
BstFNI	CGCG	2 cut(s)	129, 516
BstH2I	RGCGCY	1 cut(s)	1224
BstHHI	GCGC	2 cut(s)	240, 1223
BstKTI	GATC	4 cut(s)	111, 168, 1020, 1383
BstMAI	GTCTC	7 cut(s)	78, 143, 332, 712, 905, 1247, 1490
BstMBI	GATC	4 cut(s)	108, 165, 1017, 1380
BstMCI	CGRYCG	1 cut(s)	1075
BstMWI	GCNNNNNNNGC	2 cut(s)	411, 545
BstNI	CCWGG	6 cut(s)	122, 188, 562, 854, 1225, 1271
BstPAI	GACNNNNGTC	1 cut(s)	1406
BstPI	GGTNACC	2 cut(s)	578, 668
BstSCI	CCNGG	9 cut(s)	120, 186, 325, 560, 852, 1223, 1269, 1278, 1279
BstSLI	GKGCMC	2 cut(s)	206, 1420
BstUI	CGCG	2 cut(s)	129, 516
BstV1I	GCAGC	2 cut(s)	38, 859
BstV2I	GAAGAC	2 cut(s)	596, 1048
BsuI	GTATCC	1 cut(s)	1334
BtrI	CACGTC	1 cut(s)	1429
BtsCI	GGATG	3 cut(s)	196, 540, 909
BtsIMutI	CAGTG	3 cut(s)	206, 1135, 1174
CfoI	GCGC	2 cut(s)	240, 1223
Cfr10I	RCCGGY	1 cut(s)	1070
Cfr13I	GGNCC	6 cut(s)	124, 564, 1273, 1401, 1432, 1456
Cfr9I	CCCGGG	1 cut(s)	1279
CseI	GACGC	4 cut(s)	438, 505, 522, 759
CsiI	ACCWGGT	2 cut(s)	560, 1269
Csp6I	GTAC	3 cut(s)	79, 1150, 1348
CviAII	CATG	6 cut(s)	47, 174, 1012, 1193, 1330, 1378
CviQI	GTAC	3 cut(s)	79, 1150, 1348
DdeI	CTNAG	8 cut(s)	55, 75, 153, 843, 921, 1112, 1127, 1134
DpnI	GATC	4 cut(s)	110, 167, 1019, 1382
DpnII	GATC	4 cut(s)	108, 165, 1017, 1380
DraIII	CACNNNGTG	1 cut(s)	1315
DrdI	GACNNNNNNGTC	1 cut(s)	1271
DseDI	GACNNNNNNGTC	1 cut(s)	1271
EaeI	YGGCCR	1 cut(s)	1047
Eam1104I	CTCTTC	1 cut(s)	1295
EarI	CTCTTC	1 cut(s)	1295
EciI	GGCGGA	2 cut(s)	1112, 1265
Ecl136II	GAGCTC	1 cut(s)	1512
Eco130I	CCWWGG	3 cut(s)	295, 647, 949
Eco24I	GRGCYC	3 cut(s)	135, 383, 1514
Eco31I	GGTCTC	2 cut(s)	1247, 1490
Eco47I	GGWCC	5 cut(s)	564, 1273, 1401, 1432, 1456
Eco53kI	GAGCTC	1 cut(s)	1512
Eco57I	CTGAAG	2 cut(s)	1042, 1081
Eco88I	CYCGRG	2 cut(s)	335, 1279
Eco91I	GGTNACC	2 cut(s)	578, 668
EcoICRI	GAGCTC	1 cut(s)	1512
EcoO109I	RGGNCCY	1 cut(s)	1401
EcoO65I	GGTNACC	2 cut(s)	578, 668
EcoRII	CCWGG	6 cut(s)	120, 186, 560, 852, 1223, 1269
EcoT14I	CCWWGG	3 cut(s)	295, 647, 949
EcoT38I	GRGCYC	3 cut(s)	135, 383, 1514
ErhI	CCWWGG	3 cut(s)	295, 647, 949
Esp3I	CGTCTC	1 cut(s)	905
FaeI	CATG	6 cut(s)	50, 177, 1015, 1196, 1333, 1381
FaiI	YATR	9 cut(s)	48, 175, 262, 447, 1013, 1194, 1206, 1331, 1379
FaqI	GGGAC	8 cut(s)	191, 318, 441, 870, 909, 984, 993, 1296
FatI	CATG	6 cut(s)	46, 173, 1011, 1192, 1329, 1377
FauI	CCCGC	4 cut(s)	134, 151, 553, 1407
FbaI	TGATCA	1 cut(s)	1380
Fnu4HI	GCNGC	3 cut(s)	52, 415, 848
FokI	GGATG	3 cut(s)	203, 527, 896
FriOI	GRGCYC	3 cut(s)	135, 383, 1514
Fsp4HI	GCNGC	3 cut(s)	52, 415, 848
FspBI	CTAG	4 cut(s)	6, 311, 491, 608
GlaI	GCGC	2 cut(s)	239, 1222
GluI	GCNGC	3 cut(s)	52, 415, 848
GsuI	CTGGAG	2 cut(s)	104, 836
HaeII	RGCGCY	1 cut(s)	1224
HapII	CCGG	5 cut(s)	207, 327, 549, 1071, 1280
HgaI	GACGC	4 cut(s)	438, 505, 522, 759
HhaI	GCGC	2 cut(s)	240, 1223
Hin1I	GRCGYC	4 cut(s)	430, 751, 898, 1053
Hin1II	CATG	6 cut(s)	50, 177, 1015, 1196, 1333, 1381
Hin6I	GCGC	2 cut(s)	238, 1221
HinP1I	GCGC	2 cut(s)	238, 1221
HinfI	GANTC	9 cut(s)	170, 210, 225, 350, 552, 654, 792, 804, 923
HpaII	CCGG	5 cut(s)	207, 327, 549, 1071, 1280
HphI	GGTGA	4 cut(s)	331, 539, 590, 1249
Hpy166II	GTNNAC	3 cut(s)	204, 286, 1240
Hpy188I	TCNGA	5 cut(s)	165, 222, 355, 364, 1214
Hpy188III	TCNNGA	6 cut(s)	335, 608, 717, 902, 920, 1360
Hpy8I	GTNNAC	3 cut(s)	204, 286, 1240
Hpy99I	CGWCG	6 cut(s)	236, 516, 578, 1055, 1298, 1430
HpyAV	CCTTC	8 cut(s)	257, 267, 449, 518, 735, 1050, 1318, 1366
HpyCH4III	ACNGT	3 cut(s)	72, 578, 1460
HpyCH4IV	ACGT	5 cut(s)	288, 531, 898, 1053, 1428
HpyCH4V	TGCA	3 cut(s)	204, 788, 1321
HpyF10VI	GCNNNNNNNGC	2 cut(s)	411, 545
HpyF3I	CTNAG	8 cut(s)	55, 75, 153, 843, 921, 1112, 1127, 1134
HpySE526I	ACGT	5 cut(s)	288, 531, 898, 1053, 1428
Hsp92I	GRCGYC	4 cut(s)	430, 751, 898, 1053
Hsp92II	CATG	6 cut(s)	50, 177, 1015, 1196, 1333, 1381
HspAI	GCGC	2 cut(s)	238, 1221
Ksp22I	TGATCA	1 cut(s)	1380
Kzo9I	GATC	4 cut(s)	108, 165, 1017, 1380
LguI	GCTCTTC	1 cut(s)	1295
LmnI	GCTCC	4 cut(s)	123, 744, 855, 1517
Lsp1109I	GCAGC	2 cut(s)	38, 859
LweI	GCATC	3 cut(s)	312, 805, 1086
MabI	ACCWGGT	2 cut(s)	560, 1269
MaeI	CTAG	4 cut(s)	6, 311, 491, 608
MaeII	ACGT	5 cut(s)	288, 531, 898, 1053, 1428
MaeIII	GTNAC	5 cut(s)	527, 553, 578, 668, 1530
MalI	GATC	4 cut(s)	110, 167, 1019, 1382
MbiI	CCGCTC	1 cut(s)	842
MboI	GATC	4 cut(s)	108, 165, 1017, 1380
MboII	GAAGA	4 cut(s)	596, 1027, 1048, 1282
MhlI	GDGCHC	5 cut(s)	135, 206, 383, 1420, 1514
MluI	ACGCGT	1 cut(s)	514
MlyI	GAGTC	6 cut(s)	179, 219, 359, 561, 798, 932
MmeI	TCCRAC	1 cut(s)	143
MseI	TTAA	1 cut(s)	1558
MspI	CCGG	5 cut(s)	207, 327, 549, 1071, 1280
MspR9I	CCNGG	9 cut(s)	122, 188, 327, 562, 854, 1225, 1271, 1280, 1281
Mva1269I	GAATGC	1 cut(s)	1192
MvaI	CCWGG	6 cut(s)	122, 188, 562, 854, 1225, 1271
MvnI	CGCG	2 cut(s)	129, 516
MwoI	GCNNNNNNNGC	2 cut(s)	411, 545
NciI	CCSGG	3 cut(s)	327, 1280, 1281
NdeII	GATC	4 cut(s)	108, 165, 1017, 1380
NlaIII	CATG	6 cut(s)	50, 177, 1015, 1196, 1333, 1381
NlaIV	GGNNCC	2 cut(s)	1118, 1475
NmeAIII	GCCGAG	1 cut(s)	731
NmuCI	GTSAC	4 cut(s)	527, 553, 578, 1530
NspV	TTCGAA	1 cut(s)	483
PciSI	GCTCTTC	1 cut(s)	1295
PcsI	WCGNNNNNNNCGW	1 cut(s)	1248
PctI	GAATGC	1 cut(s)	1192
PfeI	GAWTC	3 cut(s)	225, 654, 792
PflFI	GACNNNGTC	2 cut(s)	1271, 1430
PkrI	GCNGC	3 cut(s)	53, 416, 849
PleI	GAGTC	6 cut(s)	178, 218, 358, 560, 798, 931
PpsI	GAGTC	6 cut(s)	178, 218, 358, 560, 798, 931
PpuMI	RGGWCCY	1 cut(s)	1401
PshAI	GACNNNNGTC	1 cut(s)	1406
Psp124BI	GAGCTC	1 cut(s)	1514
Psp5II	RGGWCCY	1 cut(s)	1401
Psp6I	CCWGG	6 cut(s)	120, 186, 560, 852, 1223, 1269
PspEI	GGTNACC	2 cut(s)	578, 668
PspGI	CCWGG	6 cut(s)	120, 186, 560, 852, 1223, 1269
PspN4I	GGNNCC	2 cut(s)	1118, 1475
PspPI	GGNCC	6 cut(s)	124, 564, 1273, 1401, 1432, 1456
PspPPI	RGGWCCY	1 cut(s)	1401
PsrI	GAACNNNNNNTAC	2 cut(s)	1466, 1498
PsyI	GACNNNGTC	2 cut(s)	1271, 1430
RsaI	GTAC	3 cut(s)	80, 1151, 1349
RsaNI	GTAC	3 cut(s)	79, 1150, 1348
SacI	GAGCTC	1 cut(s)	1514
SapI	GCTCTTC	1 cut(s)	1295
SaqAI	TTAA	1 cut(s)	1558
SatI	GCNGC	3 cut(s)	52, 415, 848
Sau3AI	GATC	4 cut(s)	108, 165, 1017, 1380
Sau96I	GGNCC	6 cut(s)	124, 564, 1273, 1401, 1432, 1456
SchI	GAGTC	6 cut(s)	179, 219, 359, 561, 798, 932
ScrFI	CCNGG	9 cut(s)	122, 188, 327, 562, 854, 1225, 1271, 1280, 1281
SduI	GDGCHC	5 cut(s)	135, 206, 383, 1420, 1514
SexAI	ACCWGGT	2 cut(s)	560, 1269
SfaNI	GCATC	3 cut(s)	312, 805, 1086
SfiI	GGCCNNNNNGGCC	1 cut(s)	411
SfuI	TTCGAA	1 cut(s)	483
SinI	GGWCC	5 cut(s)	564, 1273, 1401, 1432, 1456
SmaI	CCCGGG	1 cut(s)	1281
SmlI	CTYRAG	3 cut(s)	1065, 1507, 1516
SmoI	CTYRAG	3 cut(s)	1065, 1507, 1516
SsiI	CCGC	9 cut(s)	127, 142, 158, 415, 546, 840, 1123, 1276, 1414
SspMI	CTAG	4 cut(s)	6, 311, 491, 608
SstI	GAGCTC	1 cut(s)	1514
StyD4I	CCNGG	9 cut(s)	120, 186, 325, 560, 852, 1223, 1269, 1278, 1279
StyI	CCWWGG	3 cut(s)	295, 647, 949
TaaI	ACNGT	3 cut(s)	72, 578, 1460
TaiI	ACGT	5 cut(s)	291, 534, 901, 1056, 1431
TaqI	TCGA	7 cut(s)	168, 234, 483, 716, 795, 828, 903
TaqII	GACCGA	2 cut(s)	510, 1379
TatI	WGTACW	3 cut(s)	78, 1149, 1347
TauI	GCSGC	1 cut(s)	417
TfiI	GAWTC	3 cut(s)	225, 654, 792
Tru1I	TTAA	1 cut(s)	1558
Tru9I	TTAA	1 cut(s)	1558
TscAI	CASTG	3 cut(s)	206, 1135, 1181
TseFI	GTSAC	4 cut(s)	527, 553, 578, 1530
TseI	GCWGC	2 cut(s)	51, 847
Tsp45I	GTSAC	4 cut(s)	527, 553, 578, 1530
TspDTI	ATGAA	5 cut(s)	35, 249, 898, 1028, 1032
TspGWI	ACGGA	2 cut(s)	1353, 1396
TspMI	CCCGGG	1 cut(s)	1279
TspRI	CASTG	3 cut(s)	206, 1135, 1181
Tth111I	GACNNNGTC	2 cut(s)	1271, 1430
VneI	GTGCAC	1 cut(s)	202
VpaK11BI	GGWCC	5 cut(s)	564, 1273, 1401, 1432, 1456
XbaI	TCTAGA	1 cut(s)	607
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1231
XmaI	CCCGGG	1 cut(s)	1279
XspI	CTAG	4 cut(s)	6, 311, 491, 608
ZraI	GACGTC	2 cut(s)	899, 1054

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.