Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0000311

Physical Location & Seq

Genomic Coordinates Forward (+)

17816560 .. 17821051

Gene Structure 4492 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g21420.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGGCTAAGCCTATAGCTCTCGCCTTTTCTCTCTGTTTGCTTGTCCTCTTCCAGAGCTGCTTAGCAGCTCACCAACAATTTCAGTCGAGCCAGCGAAATGAATGCCAATTAGATCAGCTCCAAGCCCGTGAACCTGATAACCGCATTGAGACTGAAGCGGGTAGGATCGAATCCTGGGACTACAACCAGGACGATTTCCAATGTGCTGGTGTTGCCGTTCAACGAATTACCATAGAAAGAAATGGCCTTCACTTGCCTTCTTACTCCCATGCTCCACAACTCACTTACATAGTGCAAGGCAATGGTTTTCTATCAACTGTTTTCCCTGGCTGTCCTGAAACTTTTGAAGAATCTGAGCAATCTGATGAAGAACAAGGTCAACAACAGTGGCAAGGCCAGCAAGGGCGCCATGGACAGCAAGGCCGCGGGCAACAAGAACAGGAAGAGTATGAACAACAAGGCCGTGGTCAACGAGGGCAACAAGGCCCTGGACAGCAAAGTCGTCATAGACAACAAGGGCGGCACAGCCAACAGGGACAAGAGAGTTTCGAGCAGCTAGACAGACACCAGAAGGTTCAACGCATCAGAGAAGGTGATGTGATTGCTATTCCTGCTGGAGTCACCTACTGGTCCTACAACGACGGTGACCAACCTCTTGTTGCTGTCAATCTTCTTGATATCGGCAACCAACAAAACCAGCTTGACCGTAACCCCAGGAGATTCTATCTGGCTGGTAATCCACAAGATGAGTTTAACCAACACGGGCAAAGCCAGAGTCGTCGGGGCCAGCAAGGACAAAGTCAATGGGACCAGGACCAGCAACAGCAACGAGAGAGGAGCAGGCACCAGCAACAGCAAGGAGGAAGGAGCAGGCACCAGCAACAAGAAGGAAACAACAAGAACATCTTCGCCGGCTTCAACACACAGCTCCTCGCTGACGCTCTGAACATTGATCAACAGACTGCCCAGCAGCTTCAGGGACAGAACGACAACAGACCCCAAATCGTGAGAGTTAAAGGACGTCTCGACTTTGTTCAGCCAGCAGAGTCAGAACAGGAGGAAAGACAACAACAGGGAATTCAGAGACAACAGGGACAAGGACGGAATGGTTTTGAGGAGACATTCTGCAACTTCAGGATCAAAGAGAATATCGGCAGGCCTTCACGCGCTGACGTCTTCAGTCCCCAAGCCGGTCGCATCAGCACCCTCAACAGCTTTAAGTTGCCTATTCTCAGGCACCTTGACCTCAGCGCTGAGAGAGGCTTCTTCTATAACAATGCTATCTACAGTCCTCACTGGAACTTGAACGCCCATGAAGTCTACTACGTCATTAGAGGTAGTGCTAGGGTTCAGGTTGTGAACAACAACGGCCAGGCCATCTTGGACAACGAGGTCCGCCAGGGCCAGCTCTTCATTGTGCCACAGAACCATGCAGTGTTGCATAAGGCTAGCAACAATGGATTCGAATACATTGCTTTCAAGACCCAAGACAATGCTAAGATTAACACTCTTGCTGGCCGGACCTCAGTCTTGCGGGCACTCCCTGACGTGGTCCTCGCTAACGCATACCAGATTGATCGACAACAGGCAAGGACTCTCAAGTACAACAGGCAGGAGACTGTTGCTTTGAGCTCATCAAGGTCTCCTCGATCCCACAGGAACTGGTTGGATATTGCTGAGATGTTTGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009791 GO:0009987 GO:0010033 GO:0010154 GO:0010431 GO:0021700 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033095 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045735 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071695 GO:0097305 GO:0097306 GO:0097708 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

564

Amino Acids

64.49

Weight (kDa)

6.78

Isoelectric Point (pI)

63.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	41 - 247	1.5e-24	Cupin
Cupin_1	PF00190	383 - 530	2.9e-41	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03880 AT1G03890 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT5G44120 AT5G44120 AT5G44120
fragaria_vesca	FvH4_2g21390 FvH4_2g21390 FvH4_2g21400 FvH4_2g21410 FvH4_2g21410 FvH4_2g21410 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21440 FvH4_3g19080
malus_domestica	MD01G1024700.v1.1 MD05G1196800.v1.1 MD05G1196900.v1.1 MD17G1078200.v1.1
prunus_persica	Prupe.8G223300_v2.0.a1 Prupe.8G223400_v2.0.a1 Prupe.8G223400_v2.0.a1
pyrus_communis	pycom05g18380 pycom05g18390
rosa_chinensis	RchiOBHm_Chr6g0287991 RchiOBHm_Chr6g0288001 RchiOBHm_Chr6g0288021 RchiOBHm_Chr6g0288031 RchiOBHm_Chr6g0288041 RchiOBHm_Chr6g0288051 RchiOBHm_Chr6g0288071
rosa_laevigata	RLG00000012441 RLG00000012443 RLG00000012444 RLG00000012446 RLG00000012447 RLG00000012448
rosa_multiflora	Rmu_co8147412.1_g000001 Rmu_co8487931.1_g000001 Rmu_co8505755.1_g000001 Rmu_sc0001117.1_g000003 Rmu_sc0001117.1_g000005 Rmu_sc0001117.1_g000011 Rmu_sc0001117.1_g000013 Rmu_sc0005266.1_g000010 Rmu_sc0010960.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252330 Rroxscaffold_7G00180530 Rroxscaffold_7G00180550 Rroxscaffold_7G00180560 Rroxscaffold_7G00180570 Rroxscaffold_7G00180580 Rroxscaffold_7G00180590
rosa_rugosa	Rorug06G0041100 Rorug06G0041200 Rorug06G0041200 Rorug06G0041400 Rorug06G0193700 Rorug06G0193700 Rorug06G0193700 Rorug06G0193800 Rorug06G0193800 Rorug06G0193900 Rorug06G0194000 Rorug06G0194100
rosa_samantha	Rh6AG303300 Rh6AG303400 Rh6AG303500 Rh6AG303700 Rh6AG303800 Rh6AG303900 Rh6AG304100 Rh6AG304200 Rh6BG309500 Rh6BG309600 Rh6BG309700 Rh6BG309900 Rh6BG310000 Rh6BG310100 Rh6BG310200 Rh6CG299600 Rh6CG299800 Rh6CG300000 Rh6CG300200 Rh6CG300300 Rh6CG317100 Rh6CG317300 Rh6CG317500 Rh6CG317700 Rh6CG317800 Rh6CG318200 Rh6DG302000 Rh6DG302100 Rh6DG302300 Rh6DG302500 Rh6DG302600 Rh6DG302700 Rh6DG303100
rosa_wichuraiana	Rw6G026230 Rw6G026240 Rw6G026260 Rw6G026280 Rw6G026300 Rw6G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	498, 1391
AatII	GACGTC	2 cut(s)	1024, 1176
AccB1I	GGYRCC	4 cut(s)	405, 843, 873, 1236
AccI	GTMKAC	1 cut(s)	1320
AccII	CGCG	2 cut(s)	426, 1167
AciI	CCGC	7 cut(s)	142, 158, 424, 426, 520, 1396, 1534
AclWI	GGATC	3 cut(s)	173, 1145, 1644
AcoI	YGGCCR	2 cut(s)	1369, 1516
AcsI	RAATTY	1 cut(s)	1077
AcuI	CTGAAG	4 cut(s)	174, 959, 1117, 1162
AcyI	GRCGYC	3 cut(s)	406, 1021, 1173
AfaI	GTAC	1 cut(s)	1604
AfeI	AGCGCT	1 cut(s)	1252
AfiI	CCNNNNNNNGG	2 cut(s)	1190, 1549
AgsI	TTSAA	6 cut(s)	221, 347, 578, 919, 1306, 1480
AjiI	CACGTC	1 cut(s)	1549
AjnI	CCWGG	8 cut(s)	173, 186, 325, 487, 713, 810, 1371, 1398
Alw21I	GWGCWC	1 cut(s)	1634
Alw26I	GTCTC	6 cut(s)	143, 1028, 1078, 1112, 1610, 1647
AlwI	GGATC	3 cut(s)	173, 1145, 1644
AlwNI	CAGNNNCTG	1 cut(s)	1662
Aor51HI	AGCGCT	1 cut(s)	1252
ApeKI	GCWGC	4 cut(s)	57, 65, 553, 970
ApoI	RAATTY	1 cut(s)	1077
ArsI	GACNNNNNNTTYG	4 cut(s)	760, 792, 1609, 1641
Asp700I	GAANNNNTTC	1 cut(s)	905
AspLEI	GCGC	3 cut(s)	408, 1169, 1253
AspS9I	GGNCC	9 cut(s)	485, 630, 784, 808, 814, 1393, 1402, 1521, 1552
AsuHPI	GGTGA	4 cut(s)	62, 605, 613, 656
AsuII	TTCGAA	1 cut(s)	1464
AsuNHI	GCTAGC	1 cut(s)	1448
AvaII	GGWCC	6 cut(s)	630, 808, 814, 1393, 1521, 1552
BaeGI	GKGCMC	1 cut(s)	1540
BanI	GGYRCC	4 cut(s)	405, 843, 873, 1236
BanII	GRGCYC	1 cut(s)	1634
BbsI	GAAGAC	1 cut(s)	1168
Bbv12I	GWGCWC	1 cut(s)	1634
BbvCI	CCTCAGC	1 cut(s)	1247
BbvI	GCAGC	4 cut(s)	44, 77, 565, 982
BccI	CCATC	1 cut(s)	1385
BceAI	ACGGC	3 cut(s)	200, 447, 1384
BcgI	CGANNNNNNTGC	4 cut(s)	84, 118, 1454, 1488
BciT130I	CCWGG	8 cut(s)	175, 188, 327, 489, 715, 812, 1373, 1400
BclI	TGATCA	1 cut(s)	952
BcoDI	GTCTC	6 cut(s)	143, 1028, 1078, 1112, 1610, 1647
BfaI	CTAG	3 cut(s)	557, 1344, 1449
BfmI	CTRYAG	2 cut(s)	12, 1285
BfoI	RGCGCY	2 cut(s)	409, 1254
BisI	GCNGC	6 cut(s)	58, 66, 424, 521, 554, 971
BlpI	GCTNAGC	2 cut(s)	6, 61
BlsI	GCNGC	6 cut(s)	59, 67, 425, 522, 555, 972
Bme1390I	CCNGG	8 cut(s)	175, 188, 327, 489, 715, 812, 1373, 1400
Bme18I	GGWCC	6 cut(s)	630, 808, 814, 1393, 1521, 1552
BmgBI	CACGTC	1 cut(s)	1549
BmgT120I	GGNCC	9 cut(s)	485, 630, 784, 808, 814, 1393, 1402, 1521, 1552
BmiI	GGNNCC	6 cut(s)	407, 785, 809, 845, 875, 1238
BmrFI	CCNGG	8 cut(s)	175, 188, 327, 489, 715, 812, 1373, 1400
BmsI	GCATC	2 cut(s)	591, 1206
BmtI	GCTAGC	1 cut(s)	1452
BoxI	GACNNNNGTC	1 cut(s)	1526
BpiI	GAAGAC	1 cut(s)	1168
BpmI	CTGGAG	1 cut(s)	636
Bpu10I	CCTNAGC	1 cut(s)	1247
Bpu1102I	GCTNAGC	2 cut(s)	6, 61
Bpu14I	TTCGAA	1 cut(s)	1464
BpuEI	CTTGAG	1 cut(s)	1583
BsaHI	GRCGYC	3 cut(s)	406, 1021, 1173
BsaI	GGTCTC	1 cut(s)	1647
BsaJI	CCNNGG	8 cut(s)	174, 325, 409, 424, 463, 487, 713, 1399
Bsc4I	CCNNNNNNNGG	2 cut(s)	1190, 1549
Bse118I	RCCGGY	2 cut(s)	911, 1190
Bse1I	ACTGG	3 cut(s)	632, 1301, 1667
Bse3DI	GCAATG	2 cut(s)	307, 1470
BseBI	CCWGG	8 cut(s)	175, 188, 327, 489, 715, 812, 1373, 1400
BseDI	CCNNGG	8 cut(s)	174, 325, 409, 424, 463, 487, 713, 1399
BseLI	CCNNNNNNNGG	2 cut(s)	1190, 1549
BseMI	GCAATG	2 cut(s)	307, 1470
BseMII	CTCAG	6 cut(s)	345, 1245, 1246, 1261, 1539, 1668
BseNI	ACTGG	3 cut(s)	632, 1301, 1667
BseRI	GAGGAG	4 cut(s)	850, 920, 1130, 1635
BseSI	GKGCMC	1 cut(s)	1540
BseXI	GCAGC	4 cut(s)	44, 77, 565, 982
BseYI	CCCAGC	1 cut(s)	966
Bsh1236I	CGCG	2 cut(s)	426, 1167
Bsh1285I	CGRYCG	1 cut(s)	1195
BshNI	GGYRCC	4 cut(s)	405, 843, 873, 1236
BsiEI	CGRYCG	1 cut(s)	1195
BsiHKAI	GWGCWC	1 cut(s)	1634
BsiSI	CCGG	3 cut(s)	912, 1191, 1519
BslFI	GGGAC	6 cut(s)	191, 549, 821, 993, 1107, 1167
BslI	CCNNNNNNNGG	2 cut(s)	1190, 1549
BsmAI	GTCTC	6 cut(s)	143, 1028, 1078, 1112, 1610, 1647
BsmBI	CGTCTC	1 cut(s)	1028
BsmFI	GGGAC	6 cut(s)	191, 549, 821, 993, 1107, 1167
BsmI	GAATGC	1 cut(s)	107
Bso31I	GGTCTC	1 cut(s)	1647
Bsp119I	TTCGAA	1 cut(s)	1464
Bsp1286I	GDGCHC	2 cut(s)	1540, 1634
Bsp143I	GATC	6 cut(s)	112, 165, 952, 1137, 1576, 1649
Bsp1720I	GCTNAGC	2 cut(s)	6, 61
Bsp19I	CCATGG	1 cut(s)	409
BspACI	CCGC	7 cut(s)	142, 158, 424, 426, 520, 1396, 1534
BspCNI	CTCAG	6 cut(s)	346, 1245, 1246, 1260, 1538, 1669
BspFNI	CGCG	2 cut(s)	426, 1167
BspLI	GGNNCC	6 cut(s)	407, 785, 809, 845, 875, 1238
BspOI	GCTAGC	1 cut(s)	1452
BspPI	GGATC	3 cut(s)	173, 1145, 1644
BspQI	GCTCTTC	1 cut(s)	1415
BspT104I	TTCGAA	1 cut(s)	1464
BspT107I	GGYRCC	4 cut(s)	405, 843, 873, 1236
BspTNI	GGTCTC	1 cut(s)	1647
BsrDI	GCAATG	2 cut(s)	307, 1470
BsrFI	RCCGGY	2 cut(s)	911, 1190
BsrI	ACTGG	3 cut(s)	632, 1301, 1667
BssAI	RCCGGY	2 cut(s)	911, 1190
BssECI	CCNNGG	8 cut(s)	174, 325, 409, 424, 463, 487, 713, 1399
BssMI	GATC	6 cut(s)	112, 165, 952, 1137, 1576, 1649
BssNI	GRCGYC	3 cut(s)	406, 1021, 1173
BssT1I	CCWWGG	1 cut(s)	409
Bst2UI	CCWGG	8 cut(s)	175, 188, 327, 489, 715, 812, 1373, 1400
Bst4CI	ACNGT	6 cut(s)	319, 387, 644, 707, 1289, 1621
Bst6I	CTCTTC	3 cut(s)	53, 438, 1415
BstACI	GRCGYC	3 cut(s)	406, 1021, 1173
BstBI	TTCGAA	1 cut(s)	1464
BstDEI	CTNAG	9 cut(s)	6, 61, 354, 1232, 1247, 1254, 1497, 1525, 1677
BstDSI	CCRYGG	3 cut(s)	409, 424, 463
BstEII	GGTNACC	1 cut(s)	644
BstFNI	CGCG	2 cut(s)	426, 1167
BstH2I	RGCGCY	2 cut(s)	409, 1254
BstHHI	GCGC	3 cut(s)	408, 1169, 1253
BstKTI	GATC	6 cut(s)	115, 168, 955, 1140, 1579, 1652
BstMAI	GTCTC	6 cut(s)	143, 1028, 1078, 1112, 1610, 1647
BstMBI	GATC	6 cut(s)	112, 165, 952, 1137, 1576, 1649
BstMCI	CGRYCG	1 cut(s)	1195
BstMWI	GCNNNNNNNGC	3 cut(s)	212, 397, 611
BstNI	CCWGG	8 cut(s)	175, 188, 327, 489, 715, 812, 1373, 1400
BstPAI	GACNNNNGTC	1 cut(s)	1526
BstPI	GGTNACC	1 cut(s)	644
BstSCI	CCNGG	8 cut(s)	173, 186, 325, 487, 713, 810, 1371, 1398
BstSFI	CTRYAG	2 cut(s)	12, 1285
BstSLI	GKGCMC	1 cut(s)	1540
BstUI	CGCG	2 cut(s)	426, 1167
BstV1I	GCAGC	4 cut(s)	44, 77, 565, 982
BstV2I	GAAGAC	1 cut(s)	1168
BstXI	CCANNNNNNTGG	1 cut(s)	206
BtgI	CCRYGG	3 cut(s)	409, 424, 463
BtrI	CACGTC	1 cut(s)	1549
BtsI	GCAGTG	1 cut(s)	1440
BtsIMutI	CAGTG	3 cut(s)	392, 1294, 1440
CaiI	CAGNNNCTG	1 cut(s)	1662
CfoI	GCGC	3 cut(s)	408, 1169, 1253
Cfr10I	RCCGGY	2 cut(s)	911, 1190
Cfr13I	GGNCC	9 cut(s)	485, 630, 784, 808, 814, 1393, 1402, 1521, 1552
Cfr42I	CCGCGG	1 cut(s)	427
CseI	GACGC	1 cut(s)	947
Csp6I	GTAC	1 cut(s)	1603
CspCI	CAANNNNNGTGG	2 cut(s)	368, 403
CviAII	CATG	4 cut(s)	269, 410, 1313, 1430
CviQI	GTAC	1 cut(s)	1603
DdeI	CTNAG	9 cut(s)	6, 61, 354, 1232, 1247, 1254, 1497, 1525, 1677
DinI	GGCGCC	1 cut(s)	407
DpnI	GATC	6 cut(s)	114, 167, 954, 1139, 1578, 1651
DpnII	GATC	6 cut(s)	112, 165, 952, 1137, 1576, 1649
DrdI	GACNNNNNNGTC	2 cut(s)	498, 1391
DseDI	GACNNNNNNGTC	2 cut(s)	498, 1391
EaeI	YGGCCR	2 cut(s)	1369, 1516
Eam1104I	CTCTTC	3 cut(s)	53, 438, 1415
EarI	CTCTTC	3 cut(s)	53, 438, 1415
EciI	GGCGGA	1 cut(s)	1385
Ecl136II	GAGCTC	1 cut(s)	1632
Eco130I	CCWWGG	1 cut(s)	409
Eco147I	AGGCCT	1 cut(s)	1159
Eco24I	GRGCYC	1 cut(s)	1634
Eco31I	GGTCTC	1 cut(s)	1647
Eco32I	GATATC	1 cut(s)	679
Eco47I	GGWCC	6 cut(s)	630, 808, 814, 1393, 1521, 1552
Eco47III	AGCGCT	1 cut(s)	1252
Eco53kI	GAGCTC	1 cut(s)	1632
Eco57I	CTGAAG	4 cut(s)	174, 959, 1117, 1162
Eco91I	GGTNACC	1 cut(s)	644
EcoICRI	GAGCTC	1 cut(s)	1632
EcoO109I	RGGNCCY	1 cut(s)	485
EcoO65I	GGTNACC	1 cut(s)	644
EcoRI	GAATTC	1 cut(s)	1077
EcoRII	CCWGG	8 cut(s)	173, 186, 325, 487, 713, 810, 1371, 1398
EcoRV	GATATC	1 cut(s)	679
EcoT14I	CCWWGG	1 cut(s)	409
EcoT38I	GRGCYC	1 cut(s)	1634
EgeI	GGCGCC	1 cut(s)	407
EheI	GGCGCC	1 cut(s)	407
ErhI	CCWWGG	1 cut(s)	409
Esp3I	CGTCTC	1 cut(s)	1028
FaeI	CATG	4 cut(s)	272, 413, 1316, 1433
FalI	AAGNNNNNCTT	2 cut(s)	890, 922
FaqI	GGGAC	6 cut(s)	191, 549, 821, 993, 1107, 1167
FatI	CATG	4 cut(s)	268, 409, 1312, 1429
FauI	CCCGC	3 cut(s)	151, 419, 1527
FbaI	TGATCA	1 cut(s)	952
FblI	GTMKAC	1 cut(s)	1320
Fnu4HI	GCNGC	6 cut(s)	58, 66, 424, 521, 554, 971
FriOI	GRGCYC	1 cut(s)	1634
Fsp4HI	GCNGC	6 cut(s)	58, 66, 424, 521, 554, 971
FspBI	CTAG	3 cut(s)	557, 1344, 1449
GlaI	GCGC	3 cut(s)	407, 1168, 1252
GluI	GCNGC	6 cut(s)	58, 66, 424, 521, 554, 971
GsaI	CCCAGC	1 cut(s)	970
GsuI	CTGGAG	1 cut(s)	636
HaeII	RGCGCY	2 cut(s)	409, 1254
HapII	CCGG	3 cut(s)	912, 1191, 1519
HgaI	GACGC	1 cut(s)	947
HhaI	GCGC	3 cut(s)	408, 1169, 1253
Hin1I	GRCGYC	3 cut(s)	406, 1021, 1173
Hin1II	CATG	4 cut(s)	272, 413, 1316, 1433
Hin6I	GCGC	3 cut(s)	406, 1167, 1251
HinP1I	GCGC	3 cut(s)	406, 1167, 1251
HincII	GTYRAC	2 cut(s)	380, 470
HindII	GTYRAC	2 cut(s)	380, 470
HinfI	GANTC	8 cut(s)	170, 350, 618, 720, 775, 1046, 1461, 1594
HpaII	CCGG	3 cut(s)	912, 1191, 1519
HphI	GGTGA	4 cut(s)	62, 605, 613, 656
Hpy166II	GTNNAC	5 cut(s)	131, 380, 470, 1321, 1360
Hpy188I	TCNGA	7 cut(s)	355, 364, 587, 945, 1051, 1083, 1691
Hpy188III	TCNNGA	7 cut(s)	52, 335, 674, 1006, 1025, 1135, 1480
Hpy8I	GTNNAC	5 cut(s)	131, 380, 470, 1321, 1360
Hpy99I	CGWCG	2 cut(s)	644, 783
HpyAV	CCTTC	7 cut(s)	257, 267, 565, 584, 858, 881, 1170
HpyCH4III	ACNGT	6 cut(s)	319, 387, 644, 707, 1289, 1621
HpyCH4IV	ACGT	4 cut(s)	1021, 1173, 1326, 1548
HpyCH4V	TGCA	4 cut(s)	295, 1128, 1433, 1441
HpyF10VI	GCNNNNNNNGC	3 cut(s)	212, 397, 611
HpyF3I	CTNAG	9 cut(s)	6, 61, 354, 1232, 1247, 1254, 1497, 1525, 1677
HpySE526I	ACGT	4 cut(s)	1021, 1173, 1326, 1548
Hsp92I	GRCGYC	3 cut(s)	406, 1021, 1173
Hsp92II	CATG	4 cut(s)	272, 413, 1316, 1433
HspAI	GCGC	3 cut(s)	406, 1167, 1251
KasI	GGCGCC	1 cut(s)	405
KroI	GCCGGC	1 cut(s)	911
KroNI	GCCGGC	1 cut(s)	913
Ksp22I	TGATCA	1 cut(s)	952
KspI	CCGCGG	1 cut(s)	427
Kzo9I	GATC	6 cut(s)	112, 165, 952, 1137, 1576, 1649
LguI	GCTCTTC	1 cut(s)	1415
LmnI	GCTCC	5 cut(s)	123, 277, 837, 867, 933
Lsp1109I	GCAGC	4 cut(s)	44, 77, 565, 982
LweI	GCATC	2 cut(s)	591, 1206
MaeI	CTAG	3 cut(s)	557, 1344, 1449
MaeII	ACGT	4 cut(s)	1021, 1173, 1326, 1548
MaeIII	GTNAC	3 cut(s)	619, 644, 707
MalI	GATC	6 cut(s)	114, 167, 954, 1139, 1578, 1651
MboI	GATC	6 cut(s)	112, 165, 952, 1137, 1576, 1649
MboII	GAAGA	9 cut(s)	40, 359, 380, 455, 662, 898, 1168, 1258, 1402
MhlI	GDGCHC	2 cut(s)	1540, 1634
MluCI	AATT	4 cut(s)	77, 107, 225, 1077
Mly113I	GGCGCC	1 cut(s)	406
MlyI	GAGTC	4 cut(s)	627, 784, 1055, 1588
MmeI	TCCRAC	1 cut(s)	1647
MroNI	GCCGGC	1 cut(s)	911
MroXI	GAANNNNTTC	1 cut(s)	905
MseI	TTAA	4 cut(s)	753, 1014, 1218, 1503
MspA1I	CMGCKG	1 cut(s)	426
MspI	CCGG	3 cut(s)	912, 1191, 1519
MspR9I	CCNGG	8 cut(s)	175, 188, 327, 489, 715, 812, 1373, 1400
Mva1269I	GAATGC	1 cut(s)	107
MvaI	CCWGG	8 cut(s)	175, 188, 327, 489, 715, 812, 1373, 1400
MvnI	CGCG	2 cut(s)	426, 1167
MwoI	GCNNNNNNNGC	3 cut(s)	212, 397, 611
NaeI	GCCGGC	1 cut(s)	913
NarI	GGCGCC	1 cut(s)	406
NcoI	CCATGG	1 cut(s)	409
NdeII	GATC	6 cut(s)	112, 165, 952, 1137, 1576, 1649
NgoMIV	GCCGGC	1 cut(s)	911
NheI	GCTAGC	1 cut(s)	1448
NlaIII	CATG	4 cut(s)	272, 413, 1316, 1433
NlaIV	GGNNCC	6 cut(s)	407, 785, 809, 845, 875, 1238
NmuCI	GTSAC	2 cut(s)	619, 644
NspV	TTCGAA	1 cut(s)	1464
PceI	AGGCCT	1 cut(s)	1159
PciSI	GCTCTTC	1 cut(s)	1415
PctI	GAATGC	1 cut(s)	107
PdiI	GCCGGC	1 cut(s)	913
PdmI	GAANNNNTTC	1 cut(s)	905
PfeI	GAWTC	4 cut(s)	170, 350, 720, 1461
PflFI	GACNNNGTC	2 cut(s)	798, 1550
PkrI	GCNGC	6 cut(s)	59, 67, 425, 522, 555, 972
PleI	GAGTC	4 cut(s)	626, 783, 1054, 1588
PluTI	GGCGCC	1 cut(s)	409
PpsI	GAGTC	4 cut(s)	626, 783, 1054, 1588
PshAI	GACNNNNGTC	1 cut(s)	1526
Psp124BI	GAGCTC	1 cut(s)	1634
Psp6I	CCWGG	8 cut(s)	173, 186, 325, 487, 713, 810, 1371, 1398
PspEI	GGTNACC	1 cut(s)	644
PspFI	CCCAGC	1 cut(s)	966
PspGI	CCWGG	8 cut(s)	173, 186, 325, 487, 713, 810, 1371, 1398
PspN4I	GGNNCC	6 cut(s)	407, 785, 809, 845, 875, 1238
PspPI	GGNCC	9 cut(s)	485, 630, 784, 808, 814, 1393, 1402, 1521, 1552
PstNI	CAGNNNCTG	1 cut(s)	1662
PsyI	GACNNNGTC	2 cut(s)	798, 1550
RsaI	GTAC	1 cut(s)	1604
RsaNI	GTAC	1 cut(s)	1603
SacI	GAGCTC	1 cut(s)	1634
SacII	CCGCGG	1 cut(s)	427
SapI	GCTCTTC	1 cut(s)	1415
SaqAI	TTAA	4 cut(s)	753, 1014, 1218, 1503
SatI	GCNGC	6 cut(s)	58, 66, 424, 521, 554, 971
Sau3AI	GATC	6 cut(s)	112, 165, 952, 1137, 1576, 1649
Sau96I	GGNCC	9 cut(s)	485, 630, 784, 808, 814, 1393, 1402, 1521, 1552
SchI	GAGTC	4 cut(s)	627, 784, 1055, 1588
ScrFI	CCNGG	8 cut(s)	175, 188, 327, 489, 715, 812, 1373, 1400
SduI	GDGCHC	2 cut(s)	1540, 1634
SfaNI	GCATC	2 cut(s)	591, 1206
SfcI	CTRYAG	2 cut(s)	12, 1285
SfoI	GGCGCC	1 cut(s)	407
Sfr303I	CCGCGG	1 cut(s)	427
SfuI	TTCGAA	1 cut(s)	1464
SgrBI	CCGCGG	1 cut(s)	427
SinI	GGWCC	6 cut(s)	630, 808, 814, 1393, 1521, 1552
SmlI	CTYRAG	1 cut(s)	1598
SmoI	CTYRAG	1 cut(s)	1598
Sse9I	AATT	4 cut(s)	77, 107, 225, 1077
SseBI	AGGCCT	1 cut(s)	1159
SsiI	CCGC	7 cut(s)	142, 158, 424, 426, 520, 1396, 1534
SspDI	GGCGCC	1 cut(s)	405
SspMI	CTAG	3 cut(s)	557, 1344, 1449
SstI	GAGCTC	1 cut(s)	1634
StuI	AGGCCT	1 cut(s)	1159
StyD4I	CCNGG	8 cut(s)	173, 186, 325, 487, 713, 810, 1371, 1398
StyI	CCWWGG	1 cut(s)	409
TaaI	ACNGT	6 cut(s)	319, 387, 644, 707, 1289, 1621
TaiI	ACGT	4 cut(s)	1024, 1176, 1329, 1551
TaqI	TCGA	7 cut(s)	86, 168, 549, 1026, 1464, 1579, 1648
TasI	AATT	4 cut(s)	77, 107, 225, 1077
TatI	WGTACW	1 cut(s)	1602
TauI	GCSGC	2 cut(s)	426, 523
TfiI	GAWTC	4 cut(s)	170, 350, 720, 1461
Tru1I	TTAA	4 cut(s)	753, 1014, 1218, 1503
Tru9I	TTAA	4 cut(s)	753, 1014, 1218, 1503
TscAI	CASTG	3 cut(s)	392, 1301, 1440
TseFI	GTSAC	2 cut(s)	619, 644
TseI	GCWGC	4 cut(s)	57, 65, 553, 970
Tsp45I	GTSAC	2 cut(s)	619, 644
TspDTI	ATGAA	5 cut(s)	114, 381, 465, 1329, 1402
TspGWI	ACGGA	1 cut(s)	1117
TspRI	CASTG	3 cut(s)	392, 1301, 1440
Tth111I	GACNNNGTC	2 cut(s)	798, 1550
VpaK11BI	GGWCC	6 cut(s)	630, 808, 814, 1393, 1521, 1552
XapI	RAATTY	1 cut(s)	1077
XmiI	GTMKAC	1 cut(s)	1320
XmnI	GAANNNNTTC	1 cut(s)	905
XspI	CTAG	3 cut(s)	557, 1344, 1449
ZraI	GACGTC	2 cut(s)	1022, 1174

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.