Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0000311

Physical Location & Seq

Genomic Coordinates Forward (+)

50195820 .. 50197679

Gene Structure 1860 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG303300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1551 bp

ATGGCTAGGTCTTTAGCTCTCTCTTTTTGCTTGCTTGTTCTCTTTCATGGCTGCTTAGCCGATCGCCAACAGTCTCAATACAGCCAGAGCGGGCAAAATGAGTGCCAGATCAACCAGCTCCAGGCCCGCGAGCCTGACAACCGCATTGAGACTGAGGCGGGTCGGATCGAGTCATGGGACTACAACCAGGATGACTTCCAGTGCACCGGAGTCGCCGTTCAGAGAATCATCGTCGAGCGCAACGGCCTTCACTTGCCTTCTTACACCAATACTCCTCGCCTTGTTTACGTTGTCCAAGGTAGGGGTCATCTAGGAATGGTGATGCCCGGCTGTCCAGAGACATTTGAGGAGTCCGAGCAATCTGACGAGGAACAACAGGGCTCGCAACAACAACCACGGCAAGGCCGACAAGGCCGCCAGCAACAGGGACGCCGACAAGGACAATATGGACGAGAAGGCCAACAGGGAGAACAAGAGAGCTTCGAACAGCTAGACCGACACCAGAGGGTGCGACGCGTCAAGGAAGGTGACGTTATCGCCATCCCCGCCGGAGTCACAACCTGGTCCTACAACGACGGTGACCAATCTCTCATTTTTGTCAGTCTTCTAGACATCAGCAACAATCACAACCAGCTTGACCAAAACCCAAGGCGATTCTATCTTGCTGGTAACCCACAAGATGAGTTCAACCAACAAGGCCAAAGCCGAGGCCAATCGAGACAACAACAAGAACAACAGGGAAGGAGCAGACGCCAACAACAGGGAAACAACAACAACAACATCTTTGCCGGATTTGACACCAGACTCCTCGCCGATGCTCTCAACATCGACCAACAGACAGCTCAGCAGCTCCAGGGACAGAACGACAACAGGCCACAGATTGTTAGGGTTCAAGGACGTCTCGACTTCATCCAGCCTCCTGAGTCAATGAGGGAGGAAAGACAACTCCAAGGACAACAAGGACAACAGGGACAGAATGGCTTTGAGGAGGTATTCTGCCACATGAAGATCAAGCAGAACATCGGCAAGCCTTCATTGGCCGACGTCTTCAGCCCGCAAGCCGGTCGCATCAGCACCCTCAACGGCTTCAGCATGCCTATTCTCAGGCACCTCCGCCTCAGTGCTGAGAGAGGCTTCTTGTACAACAATGCTATCCACAGCCCACACTGGAACTTGAATGCCCATGAGATAGTCTATGTCATCAGAGGTAGCGCCAGGGTTCAGGTGGTGAACGACAACGGCGAGACCATCTTGGACGACCAGGTCCGCCAGGGACAGCTTTTCGTCGTGCCACAGAACCACGCCGTGTTGCAGAAGGCCATGAGCAACGGATACGAGTACATTGCCTTCAAGACTGAGGACAATGCCATGATGAACACCATGGCTGGCAGGACCTCCGTTCTGCGGGCACTTCCCGACGTGGTCCTAGCCAACGCTTACCAGATGGACCGTCAGCAGGCAAGGAACCTCAAGTACAACAGGCAGGAGACCCTTGCCTTGAGCTCCTCAAGGTCTTTCCAGTCACAGAGGAGTTGGTGGGCTATTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009791 GO:0009987 GO:0010033 GO:0010154 GO:0010431 GO:0021700 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033095 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045735 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071695 GO:0097305 GO:0097306 GO:0097708 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

516

Amino Acids

58.89

Weight (kDa)

6.62

Isoelectric Point (pI)

63.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	41 - 225	2e-27	Cupin
Cupin_1	PF00190	340 - 487	4.2e-38	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03880 AT1G03890 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT5G44120 AT5G44120 AT5G44120
fragaria_vesca	FvH4_2g21390 FvH4_2g21390 FvH4_2g21400 FvH4_2g21410 FvH4_2g21410 FvH4_2g21410 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21440 FvH4_3g19080
malus_domestica	MD01G1024700.v1.1 MD05G1196800.v1.1 MD05G1196900.v1.1 MD17G1078200.v1.1
prunus_persica	Prupe.8G223300_v2.0.a1 Prupe.8G223400_v2.0.a1 Prupe.8G223400_v2.0.a1
pyrus_communis	pycom05g18380 pycom05g18390
rosa_chinensis	RchiOBHm_Chr6g0287991 RchiOBHm_Chr6g0288001 RchiOBHm_Chr6g0288021 RchiOBHm_Chr6g0288031 RchiOBHm_Chr6g0288041 RchiOBHm_Chr6g0288051 RchiOBHm_Chr6g0288071
rosa_laevigata	RLG00000012441 RLG00000012443 RLG00000012444 RLG00000012446 RLG00000012447 RLG00000012448
rosa_multiflora	Rmu_co8147412.1_g000001 Rmu_co8487931.1_g000001 Rmu_co8505755.1_g000001 Rmu_sc0001117.1_g000003 Rmu_sc0001117.1_g000005 Rmu_sc0001117.1_g000011 Rmu_sc0001117.1_g000013 Rmu_sc0005266.1_g000010 Rmu_sc0010960.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252330 Rroxscaffold_7G00180530 Rroxscaffold_7G00180550 Rroxscaffold_7G00180560 Rroxscaffold_7G00180570 Rroxscaffold_7G00180580 Rroxscaffold_7G00180590
rosa_rugosa	Rorug06G0041100 Rorug06G0041200 Rorug06G0041200 Rorug06G0041400 Rorug06G0193700 Rorug06G0193700 Rorug06G0193700 Rorug06G0193800 Rorug06G0193800 Rorug06G0193900 Rorug06G0194000 Rorug06G0194100
rosa_samantha	Rh6AG303300 Rh6AG303400 Rh6AG303500 Rh6AG303700 Rh6AG303800 Rh6AG303900 Rh6AG304100 Rh6AG304200 Rh6BG309500 Rh6BG309600 Rh6BG309700 Rh6BG309900 Rh6BG310000 Rh6BG310100 Rh6BG310200 Rh6CG299600 Rh6CG299800 Rh6CG300000 Rh6CG300200 Rh6CG300300 Rh6CG317100 Rh6CG317300 Rh6CG317500 Rh6CG317700 Rh6CG317800 Rh6CG318200 Rh6DG302000 Rh6DG302100 Rh6DG302300 Rh6DG302500 Rh6DG302600 Rh6DG302700 Rh6DG303100
rosa_wichuraiana	Rw6G026230 Rw6G026240 Rw6G026260 Rw6G026280 Rw6G026300 Rw6G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1262
AatII	GACGTC	2 cut(s)	901, 1047
AccB1I	GGYRCC	1 cut(s)	1107
AccBSI	CCGCTC	1 cut(s)	90
AccII	CGCG	2 cut(s)	129, 516
AclWI	GGATC	1 cut(s)	173
AcoI	YGGCCR	1 cut(s)	1038
AcuI	CTGAAG	2 cut(s)	1033, 1072
AcyI	GRCGYC	4 cut(s)	430, 751, 898, 1044
AdeI	CACNNNGTG	1 cut(s)	1306
AfaI	GTAC	3 cut(s)	1142, 1340, 1475
AfiI	CCNNNNNNNGG	8 cut(s)	121, 301, 401, 424, 760, 1061, 1404, 1456
AflIII	ACRYGT	1 cut(s)	514
AgsI	TTSAA	4 cut(s)	688, 893, 1177, 1351
AjiI	CACGTC	1 cut(s)	1420
AjnI	CCWGG	7 cut(s)	120, 186, 560, 852, 1214, 1260, 1269
AloI	GAACNNNNNNTCC	2 cut(s)	201, 233
AluBI	AGCT	9 cut(s)	17, 118, 480, 490, 634, 842, 850, 1279, 1503
AluI	AGCT	9 cut(s)	17, 118, 480, 490, 634, 842, 850, 1279, 1503
Alw21I	GWGCWC	2 cut(s)	206, 1505
Alw26I	GTCTC	7 cut(s)	78, 143, 332, 712, 905, 1238, 1481
Alw44I	GTGCAC	1 cut(s)	202
AlwI	GGATC	1 cut(s)	173
ApaLI	GTGCAC	1 cut(s)	202
ApeKI	GCWGC	2 cut(s)	51, 847
AspLEI	GCGC	2 cut(s)	240, 1214
AspS9I	GGNCC	6 cut(s)	124, 564, 1264, 1392, 1423, 1447
AsuC2I	CCSGG	1 cut(s)	327
AsuHPI	GGTGA	4 cut(s)	331, 539, 590, 1240
AsuII	TTCGAA	1 cut(s)	483
AvaII	GGWCC	5 cut(s)	564, 1264, 1392, 1423, 1447
BaeGI	GKGCMC	2 cut(s)	206, 1411
BanI	GGYRCC	1 cut(s)	1107
BanII	GRGCYC	2 cut(s)	383, 1505
BarI	GAAGNNNNNNTAC	2 cut(s)	1331, 1363
BbsI	GAAGAC	2 cut(s)	596, 1039
Bbv12I	GWGCWC	2 cut(s)	206, 1505
BbvI	GCAGC	2 cut(s)	38, 859
BccI	CCATC	3 cut(s)	548, 1256, 1438
BceAI	ACGGC	6 cut(s)	200, 259, 413, 1099, 1255, 1289
BcgI	CGANNNNNNTGC	6 cut(s)	193, 227, 1046, 1080, 1325, 1359
BciT130I	CCWGG	7 cut(s)	122, 188, 562, 854, 1216, 1262, 1271
BciVI	GTATCC	1 cut(s)	1325
BcnI	CCSGG	1 cut(s)	327
BcoDI	GTCTC	7 cut(s)	78, 143, 332, 712, 905, 1238, 1481
BfaI	CTAG	5 cut(s)	6, 311, 491, 608, 1427
BfoI	RGCGCY	1 cut(s)	1215
BfuI	GTATCC	1 cut(s)	1325
BglI	GCCNNNNNGGC	1 cut(s)	411
BisI	GCNGC	3 cut(s)	52, 415, 848
BlpI	GCTNAGC	2 cut(s)	55, 843
BlsI	GCNGC	3 cut(s)	53, 416, 849
Bme1390I	CCNGG	8 cut(s)	122, 188, 327, 562, 854, 1216, 1262, 1271
Bme18I	GGWCC	5 cut(s)	564, 1264, 1392, 1423, 1447
BmgBI	CACGTC	1 cut(s)	1420
BmgT120I	GGNCC	6 cut(s)	124, 564, 1264, 1392, 1423, 1447
BmiI	GGNNCC	2 cut(s)	1109, 1466
BmrFI	CCNGG	8 cut(s)	122, 188, 327, 562, 854, 1216, 1262, 1271
BmsI	GCATC	3 cut(s)	312, 805, 1077
BpiI	GAAGAC	2 cut(s)	596, 1039
BpmI	CTGGAG	2 cut(s)	104, 836
Bpu1102I	GCTNAGC	2 cut(s)	55, 843
Bpu14I	TTCGAA	1 cut(s)	483
BpuEI	CTTGAG	3 cut(s)	1454, 1492, 1519
BpuMI	CCSGG	1 cut(s)	327
BsaHI	GRCGYC	4 cut(s)	430, 751, 898, 1044
BsaI	GGTCTC	2 cut(s)	1238, 1481
BsaJI	CCNNGG	9 cut(s)	295, 395, 647, 706, 853, 949, 1215, 1270, 1380
BsaWI	WCCGGW	1 cut(s)	206
BsaXI	ACNNNNNCTCC	4 cut(s)	201, 231, 256, 286
Bsc4I	CCNNNNNNNGG	8 cut(s)	121, 301, 401, 424, 760, 1061, 1404, 1456
Bse118I	RCCGGY	1 cut(s)	1061
Bse1I	ACTGG	3 cut(s)	199, 1172, 1519
Bse3DI	GCAATG	1 cut(s)	1341
BseBI	CCWGG	7 cut(s)	122, 188, 562, 854, 1216, 1262, 1271
BseDI	CCNNGG	9 cut(s)	295, 395, 647, 706, 853, 949, 1215, 1270, 1380
BseGI	GGATG	3 cut(s)	196, 540, 909
BseLI	CCNNNNNNNGG	8 cut(s)	121, 301, 401, 424, 760, 1061, 1404, 1456
BseMI	GCAATG	1 cut(s)	1341
BseMII	CTCAG	7 cut(s)	144, 857, 912, 1116, 1117, 1132, 1347
BseNI	ACTGG	3 cut(s)	199, 1172, 1519
BseRI	GAGGAG	6 cut(s)	264, 362, 797, 1001, 1495, 1543
BseSI	GKGCMC	2 cut(s)	206, 1411
BseXI	GCAGC	2 cut(s)	38, 859
Bsh1236I	CGCG	2 cut(s)	129, 516
Bsh1285I	CGRYCG	2 cut(s)	64, 1066
BshNI	GGYRCC	1 cut(s)	1107
BsiEI	CGRYCG	2 cut(s)	64, 1066
BsiHKAI	GWGCWC	2 cut(s)	206, 1505
BsiSI	CCGG	5 cut(s)	207, 327, 549, 789, 1062
BslFI	GGGAC	5 cut(s)	191, 441, 870, 984, 1287
BslI	CCNNNNNNNGG	8 cut(s)	121, 301, 401, 424, 760, 1061, 1404, 1456
BsmAI	GTCTC	7 cut(s)	78, 143, 332, 712, 905, 1238, 1481
BsmBI	CGTCTC	1 cut(s)	905
BsmFI	GGGAC	5 cut(s)	191, 441, 870, 984, 1287
BsmI	GAATGC	1 cut(s)	1183
Bso31I	GGTCTC	2 cut(s)	1238, 1481
Bsp119I	TTCGAA	1 cut(s)	483
Bsp1286I	GDGCHC	4 cut(s)	206, 383, 1411, 1505
Bsp1407I	TGTACA	1 cut(s)	1140
Bsp143I	GATC	4 cut(s)	61, 108, 165, 1008
Bsp1720I	GCTNAGC	2 cut(s)	55, 843
Bsp19I	CCATGG	1 cut(s)	1380
BspCNI	CTCAG	7 cut(s)	145, 856, 913, 1116, 1117, 1131, 1348
BspFNI	CGCG	2 cut(s)	129, 516
BspLI	GGNNCC	2 cut(s)	1109, 1466
BspPI	GGATC	1 cut(s)	173
BspT104I	TTCGAA	1 cut(s)	483
BspT107I	GGYRCC	1 cut(s)	1107
BspTNI	GGTCTC	2 cut(s)	1238, 1481
BsrBI	CCGCTC	1 cut(s)	90
BsrDI	GCAATG	1 cut(s)	1341
BsrFI	RCCGGY	1 cut(s)	1061
BsrGI	TGTACA	1 cut(s)	1140
BsrI	ACTGG	3 cut(s)	199, 1172, 1519
BssAI	RCCGGY	1 cut(s)	1061
BssECI	CCNNGG	9 cut(s)	295, 395, 647, 706, 853, 949, 1215, 1270, 1380
BssMI	GATC	4 cut(s)	61, 108, 165, 1008
BssNI	GRCGYC	4 cut(s)	430, 751, 898, 1044
BssT1I	CCWWGG	4 cut(s)	295, 647, 949, 1380
Bst2UI	CCWGG	7 cut(s)	122, 188, 562, 854, 1216, 1262, 1271
Bst4CI	ACNGT	3 cut(s)	72, 578, 1451
BstACI	GRCGYC	4 cut(s)	430, 751, 898, 1044
BstAUI	TGTACA	1 cut(s)	1140
BstBI	TTCGAA	1 cut(s)	483
BstDEI	CTNAG	8 cut(s)	55, 153, 843, 921, 1103, 1118, 1125, 1356
BstDSI	CCRYGG	2 cut(s)	395, 1380
BstEII	GGTNACC	2 cut(s)	578, 668
BstF5I	GGATG	3 cut(s)	196, 540, 909
BstFNI	CGCG	2 cut(s)	129, 516
BstH2I	RGCGCY	1 cut(s)	1215
BstHHI	GCGC	2 cut(s)	240, 1214
BstKTI	GATC	4 cut(s)	64, 111, 168, 1011
BstMAI	GTCTC	7 cut(s)	78, 143, 332, 712, 905, 1238, 1481
BstMBI	GATC	4 cut(s)	61, 108, 165, 1008
BstMCI	CGRYCG	2 cut(s)	64, 1066
BstMWI	GCNNNNNNNGC	2 cut(s)	411, 545
BstNI	CCWGG	7 cut(s)	122, 188, 562, 854, 1216, 1262, 1271
BstNSI	RCATGY	1 cut(s)	1096
BstPI	GGTNACC	2 cut(s)	578, 668
BstSCI	CCNGG	8 cut(s)	120, 186, 325, 560, 852, 1214, 1260, 1269
BstSLI	GKGCMC	2 cut(s)	206, 1411
BstUI	CGCG	2 cut(s)	129, 516
BstV1I	GCAGC	2 cut(s)	38, 859
BstV2I	GAAGAC	2 cut(s)	596, 1039
BsuI	GTATCC	1 cut(s)	1325
BtgI	CCRYGG	2 cut(s)	395, 1380
BtrI	CACGTC	1 cut(s)	1420
BtsCI	GGATG	3 cut(s)	196, 540, 909
BtsIMutI	CAGTG	3 cut(s)	206, 1126, 1165
CfoI	GCGC	2 cut(s)	240, 1214
Cfr10I	RCCGGY	1 cut(s)	1061
Cfr13I	GGNCC	6 cut(s)	124, 564, 1264, 1392, 1423, 1447
CseI	GACGC	4 cut(s)	438, 505, 522, 759
CsiI	ACCWGGT	2 cut(s)	560, 1260
Csp6I	GTAC	3 cut(s)	1141, 1339, 1474
CviAII	CATG	8 cut(s)	47, 174, 1003, 1093, 1184, 1321, 1369, 1381
CviQI	GTAC	3 cut(s)	1141, 1339, 1474
DdeI	CTNAG	8 cut(s)	55, 153, 843, 921, 1103, 1118, 1125, 1356
DpnI	GATC	4 cut(s)	63, 110, 167, 1010
DpnII	GATC	4 cut(s)	61, 108, 165, 1008
DraIII	CACNNNGTG	1 cut(s)	1306
DrdI	GACNNNNNNGTC	1 cut(s)	1262
DseDI	GACNNNNNNGTC	1 cut(s)	1262
EaeI	YGGCCR	1 cut(s)	1038
EciI	GGCGGA	2 cut(s)	1103, 1256
Ecl136II	GAGCTC	1 cut(s)	1503
Eco130I	CCWWGG	4 cut(s)	295, 647, 949, 1380
Eco24I	GRGCYC	2 cut(s)	383, 1505
Eco31I	GGTCTC	2 cut(s)	1238, 1481
Eco47I	GGWCC	5 cut(s)	564, 1264, 1392, 1423, 1447
Eco53kI	GAGCTC	1 cut(s)	1503
Eco57I	CTGAAG	2 cut(s)	1033, 1072
Eco91I	GGTNACC	2 cut(s)	578, 668
EcoICRI	GAGCTC	1 cut(s)	1503
EcoO109I	RGGNCCY	1 cut(s)	1392
EcoO65I	GGTNACC	2 cut(s)	578, 668
EcoRII	CCWGG	7 cut(s)	120, 186, 560, 852, 1214, 1260, 1269
EcoT14I	CCWWGG	4 cut(s)	295, 647, 949, 1380
EcoT38I	GRGCYC	2 cut(s)	383, 1505
ErhI	CCWWGG	4 cut(s)	295, 647, 949, 1380
Esp3I	CGTCTC	1 cut(s)	905
FaeI	CATG	8 cut(s)	50, 177, 1006, 1096, 1187, 1324, 1372, 1384
FaqI	GGGAC	5 cut(s)	191, 441, 870, 984, 1287
FatI	CATG	8 cut(s)	46, 173, 1002, 1092, 1183, 1320, 1368, 1380
FauI	CCCGC	6 cut(s)	83, 134, 151, 553, 1062, 1398
Fnu4HI	GCNGC	3 cut(s)	52, 415, 848
FokI	GGATG	3 cut(s)	203, 527, 896
FriOI	GRGCYC	2 cut(s)	383, 1505
Fsp4HI	GCNGC	3 cut(s)	52, 415, 848
FspBI	CTAG	5 cut(s)	6, 311, 491, 608, 1427
GlaI	GCGC	2 cut(s)	239, 1213
GluI	GCNGC	3 cut(s)	52, 415, 848
GsuI	CTGGAG	2 cut(s)	104, 836
HaeII	RGCGCY	1 cut(s)	1215
HapII	CCGG	5 cut(s)	207, 327, 549, 789, 1062
HgaI	GACGC	4 cut(s)	438, 505, 522, 759
HhaI	GCGC	2 cut(s)	240, 1214
Hin1I	GRCGYC	4 cut(s)	430, 751, 898, 1044
Hin1II	CATG	8 cut(s)	50, 177, 1006, 1096, 1187, 1324, 1372, 1384
Hin6I	GCGC	2 cut(s)	238, 1212
HinP1I	GCGC	2 cut(s)	238, 1212
HinfI	GANTC	8 cut(s)	170, 210, 225, 350, 552, 654, 804, 923
HpaII	CCGG	5 cut(s)	207, 327, 549, 789, 1062
HphI	GGTGA	4 cut(s)	331, 539, 590, 1240
Hpy166II	GTNNAC	3 cut(s)	204, 286, 1231
Hpy188I	TCNGA	5 cut(s)	165, 222, 355, 364, 1205
Hpy188III	TCNNGA	7 cut(s)	335, 608, 717, 902, 920, 1351, 1415
Hpy8I	GTNNAC	3 cut(s)	204, 286, 1231
Hpy99I	CGWCG	6 cut(s)	236, 516, 578, 1046, 1289, 1421
HpyAV	CCTTC	8 cut(s)	257, 267, 449, 518, 735, 1041, 1309, 1357
HpyCH4III	ACNGT	3 cut(s)	72, 578, 1451
HpyCH4IV	ACGT	5 cut(s)	288, 531, 898, 1044, 1419
HpyCH4V	TGCA	2 cut(s)	204, 1312
HpyF10VI	GCNNNNNNNGC	2 cut(s)	411, 545
HpyF3I	CTNAG	8 cut(s)	55, 153, 843, 921, 1103, 1118, 1125, 1356
HpySE526I	ACGT	5 cut(s)	288, 531, 898, 1044, 1419
Hsp92I	GRCGYC	4 cut(s)	430, 751, 898, 1044
Hsp92II	CATG	8 cut(s)	50, 177, 1006, 1096, 1187, 1324, 1372, 1384
HspAI	GCGC	2 cut(s)	238, 1212
Kzo9I	GATC	4 cut(s)	61, 108, 165, 1008
LmnI	GCTCC	4 cut(s)	123, 744, 855, 1508
Lsp1109I	GCAGC	2 cut(s)	38, 859
LweI	GCATC	3 cut(s)	312, 805, 1077
MabI	ACCWGGT	2 cut(s)	560, 1260
MaeI	CTAG	5 cut(s)	6, 311, 491, 608, 1427
MaeII	ACGT	5 cut(s)	288, 531, 898, 1044, 1419
MaeIII	GTNAC	5 cut(s)	527, 553, 578, 668, 1521
MalI	GATC	4 cut(s)	63, 110, 167, 1010
MbiI	CCGCTC	1 cut(s)	90
MboI	GATC	4 cut(s)	61, 108, 165, 1008
MboII	GAAGA	3 cut(s)	596, 1018, 1039
MhlI	GDGCHC	4 cut(s)	206, 383, 1411, 1505
MluI	ACGCGT	1 cut(s)	514
MlyI	GAGTC	6 cut(s)	179, 219, 359, 561, 798, 932
MmeI	TCCRAC	1 cut(s)	143
MseI	TTAA	1 cut(s)	1549
MspI	CCGG	5 cut(s)	207, 327, 549, 789, 1062
MspR9I	CCNGG	8 cut(s)	122, 188, 327, 562, 854, 1216, 1262, 1271
Mva1269I	GAATGC	1 cut(s)	1183
MvaI	CCWGG	7 cut(s)	122, 188, 562, 854, 1216, 1262, 1271
MvnI	CGCG	2 cut(s)	129, 516
MwoI	GCNNNNNNNGC	2 cut(s)	411, 545
NciI	CCSGG	1 cut(s)	327
NcoI	CCATGG	1 cut(s)	1380
NdeII	GATC	4 cut(s)	61, 108, 165, 1008
NlaIII	CATG	8 cut(s)	50, 177, 1006, 1096, 1187, 1324, 1372, 1384
NlaIV	GGNNCC	2 cut(s)	1109, 1466
NmeAIII	GCCGAG	1 cut(s)	731
NmuCI	GTSAC	4 cut(s)	527, 553, 578, 1521
NspI	RCATGY	1 cut(s)	1096
NspV	TTCGAA	1 cut(s)	483
PaeI	GCATGC	1 cut(s)	1096
PcsI	WCGNNNNNNNCGW	2 cut(s)	403, 1239
PctI	GAATGC	1 cut(s)	1183
PfeI	GAWTC	2 cut(s)	225, 654
PflFI	GACNNNGTC	2 cut(s)	1262, 1421
PkrI	GCNGC	3 cut(s)	53, 416, 849
Ple19I	CGATCG	1 cut(s)	64
PleI	GAGTC	6 cut(s)	178, 218, 358, 560, 798, 931
PpsI	GAGTC	6 cut(s)	178, 218, 358, 560, 798, 931
PpuMI	RGGWCCY	1 cut(s)	1392
Psp124BI	GAGCTC	1 cut(s)	1505
Psp5II	RGGWCCY	1 cut(s)	1392
Psp6I	CCWGG	7 cut(s)	120, 186, 560, 852, 1214, 1260, 1269
PspEI	GGTNACC	2 cut(s)	578, 668
PspGI	CCWGG	7 cut(s)	120, 186, 560, 852, 1214, 1260, 1269
PspN4I	GGNNCC	2 cut(s)	1109, 1466
PspPI	GGNCC	6 cut(s)	124, 564, 1264, 1392, 1423, 1447
PspPPI	RGGWCCY	1 cut(s)	1392
PsrI	GAACNNNNNNTAC	2 cut(s)	1457, 1489
PsyI	GACNNNGTC	2 cut(s)	1262, 1421
PvuI	CGATCG	1 cut(s)	64
RsaI	GTAC	3 cut(s)	1142, 1340, 1475
RsaNI	GTAC	3 cut(s)	1141, 1339, 1474
SacI	GAGCTC	1 cut(s)	1505
SaqAI	TTAA	1 cut(s)	1549
SatI	GCNGC	3 cut(s)	52, 415, 848
Sau3AI	GATC	4 cut(s)	61, 108, 165, 1008
Sau96I	GGNCC	6 cut(s)	124, 564, 1264, 1392, 1423, 1447
SchI	GAGTC	6 cut(s)	179, 219, 359, 561, 798, 932
ScrFI	CCNGG	8 cut(s)	122, 188, 327, 562, 854, 1216, 1262, 1271
SduI	GDGCHC	4 cut(s)	206, 383, 1411, 1505
SexAI	ACCWGGT	2 cut(s)	560, 1260
SfaNI	GCATC	3 cut(s)	312, 805, 1077
SfiI	GGCCNNNNNGGCC	1 cut(s)	411
SfuI	TTCGAA	1 cut(s)	483
SinI	GGWCC	5 cut(s)	564, 1264, 1392, 1423, 1447
SmlI	CTYRAG	3 cut(s)	1469, 1498, 1507
SmoI	CTYRAG	3 cut(s)	1469, 1498, 1507
SphI	GCATGC	1 cut(s)	1096
SspMI	CTAG	5 cut(s)	6, 311, 491, 608, 1427
SstI	GAGCTC	1 cut(s)	1505
StyD4I	CCNGG	8 cut(s)	120, 186, 325, 560, 852, 1214, 1260, 1269
StyI	CCWWGG	4 cut(s)	295, 647, 949, 1380
TaaI	ACNGT	3 cut(s)	72, 578, 1451
TaiI	ACGT	5 cut(s)	291, 534, 901, 1047, 1422
TaqI	TCGA	6 cut(s)	168, 234, 483, 716, 828, 903
TaqII	GACCGA	1 cut(s)	510
TatI	WGTACW	3 cut(s)	1140, 1338, 1473
TauI	GCSGC	1 cut(s)	417
TfiI	GAWTC	2 cut(s)	225, 654
Tru1I	TTAA	1 cut(s)	1549
Tru9I	TTAA	1 cut(s)	1549
TscAI	CASTG	3 cut(s)	206, 1126, 1172
TseFI	GTSAC	4 cut(s)	527, 553, 578, 1521
TseI	GCWGC	2 cut(s)	51, 847
Tsp45I	GTSAC	4 cut(s)	527, 553, 578, 1521
TspDTI	ATGAA	5 cut(s)	35, 898, 1019, 1023, 1388
TspGWI	ACGGA	2 cut(s)	1344, 1387
TspRI	CASTG	3 cut(s)	206, 1126, 1172
Tth111I	GACNNNGTC	2 cut(s)	1262, 1421
VneI	GTGCAC	1 cut(s)	202
VpaK11BI	GGWCC	5 cut(s)	564, 1264, 1392, 1423, 1447
XbaI	TCTAGA	1 cut(s)	607
XceI	RCATGY	1 cut(s)	1096
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1222
XspI	CTAG	5 cut(s)	6, 311, 491, 608, 1427
ZraI	GACGTC	2 cut(s)	899, 1045

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.