Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0000311

Physical Location & Seq

Genomic Coordinates Reverse (-)

19925249 .. 19932006

Gene Structure 6758 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00180570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ATGGCAAAGCATTTAGCTCTCGCCTTTTCTCTTTGCTTGCTTGTTCTCTTCCACGGCGGCTTAGCCAGACGCCAACAATCTCAGTCCAGCCAGCAAAATGAGTGCCAGCTGAACCAGATCCAAGCCCGCGAGCCTGACAACCGTATTGAGACTGAAGCAGGTCGGATTGAGTCATGGGACTACAACCAGGATGACTTGCAGTGCGCTGGTGTCGCTGTTCAAAGAATCACCATTGAGCGTAATGGCCTTCACTTGCCTTCTTACACTAACACTCCAAGGCTTGTGTACGTTGTACAAGGTAGGGGTCATCTAGGGATGGTATTCCCTGGCTGTCCTGAGACATTTGAGGAGTCTGAGCAATCTGATGAAGAACAACAGGAGCAGCAACAACAATGGCAAGGCCAACAACGGGGCCGCCAGCAACAGGGACGCCGACAAGGACAATTCGGACAGCAAGGCCAACAAGGACAACAAGACTTTGAACAGCTAGACCGACACCAGAGGGTGCGACGCGTCAAAGAAGGTGATGTTATCGCAATCCCCGCCGGAGTCACAACCTGGTCTCACAATGACGGTGACAGATCTCTTGTTTTTGTTACTCTTTTAGACATCGGCAATAACCACAACCAGCTTGACGAAAACCCAAGGCGATTTTATCTTGCTGGTAACCCACAAGATGAGTTCAACCAACAAGGCCAAAGCCAATCGAGACGACAAGGACAGCAAGGCCAAAGACAACAAGGACAACAAGGAAGGAGCAGGCAGCAACGGCAGGGAAACAACAACAACAACATCTATGCAGGCTTCGAGACACAGCTCCTCGCCGACGCTCTCAACATCGACCAGCAGACTGCCCAGCAGCTCCAGGGACAGAACGACAACAGGCCACAGATTGTTAGGGTTCAGGGACGTCTCGACTTTGTCGAGCCACCACGGTCACAGAGGGAGGAAAGACAACTGCAAGGACAACAAGGACAACAGGGACAGAATGGCCTTGAGGAGCTATTCTGCCACATGAAGATCAAGCAGAACATCGGCAAGCCTTCAGTGGCCGACGTCTTCAGCCCACAAGCCGGTCGCATCAGCACCCTCAACAGCTTTAGCCTGCCTATTCTCAGGCACCTCCGCCTCAGTGCTGAGAGAGGCTTCTTGTACAACAATGCTATCCACAGCCCACACTGGAACTTGAATGCCCATGAGATCGTCTATGTCATCAGAGGTAGCGCCAGGGTTCAGGTGGTGAACGACAACGGCGAGACCATCTTGGACGACCAGGTCCGCCAGGGACAGCTCTTCGTCGTGCCACAGAACCACGCAGTGTTGCAGAAGGCCATGAGCAACGGATACGAGTACATTGCCTTCAAGACCGATGACAATGCCATGATCAACACTCTGGCTGGCAGGACCTCCGTCCTGCGGGCACTCCCCGACGTGGTCCTTGCCAACGCCTACCAGATGGACCGTGAGCAGGCAAGGAACCTCAAATACAACAGGCAGGAGACCCTTGCCTTGAGCTCCTCAAGGTCTTCCCAGTCACAGAGGTACTGGTGGGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009791 GO:0009987 GO:0010033 GO:0010154 GO:0010431 GO:0021700 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033095 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045735 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071695 GO:0097305 GO:0097306 GO:0097708 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

518

Amino Acids

59.18

Weight (kDa)

6.91

Isoelectric Point (pI)

63.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	41 - 224	2e-27	Cupin
Cupin_1	PF00190	344 - 491	1e-40	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03880 AT1G03890 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT5G44120 AT5G44120 AT5G44120
fragaria_vesca	FvH4_2g21390 FvH4_2g21390 FvH4_2g21400 FvH4_2g21410 FvH4_2g21410 FvH4_2g21410 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21440 FvH4_3g19080
malus_domestica	MD01G1024700.v1.1 MD05G1196800.v1.1 MD05G1196900.v1.1 MD17G1078200.v1.1
prunus_persica	Prupe.8G223300_v2.0.a1 Prupe.8G223400_v2.0.a1 Prupe.8G223400_v2.0.a1
pyrus_communis	pycom05g18380 pycom05g18390
rosa_chinensis	RchiOBHm_Chr6g0287991 RchiOBHm_Chr6g0288001 RchiOBHm_Chr6g0288021 RchiOBHm_Chr6g0288031 RchiOBHm_Chr6g0288041 RchiOBHm_Chr6g0288051 RchiOBHm_Chr6g0288071
rosa_laevigata	RLG00000012441 RLG00000012443 RLG00000012444 RLG00000012446 RLG00000012447 RLG00000012448
rosa_multiflora	Rmu_co8147412.1_g000001 Rmu_co8487931.1_g000001 Rmu_co8505755.1_g000001 Rmu_sc0001117.1_g000003 Rmu_sc0001117.1_g000005 Rmu_sc0001117.1_g000011 Rmu_sc0001117.1_g000013 Rmu_sc0005266.1_g000010 Rmu_sc0010960.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252330 Rroxscaffold_7G00180530 Rroxscaffold_7G00180550 Rroxscaffold_7G00180560 Rroxscaffold_7G00180570 Rroxscaffold_7G00180580 Rroxscaffold_7G00180590
rosa_rugosa	Rorug06G0041100 Rorug06G0041200 Rorug06G0041200 Rorug06G0041400 Rorug06G0193700 Rorug06G0193700 Rorug06G0193700 Rorug06G0193800 Rorug06G0193800 Rorug06G0193900 Rorug06G0194000 Rorug06G0194100
rosa_samantha	Rh6AG303300 Rh6AG303400 Rh6AG303500 Rh6AG303700 Rh6AG303800 Rh6AG303900 Rh6AG304100 Rh6AG304200 Rh6BG309500 Rh6BG309600 Rh6BG309700 Rh6BG309900 Rh6BG310000 Rh6BG310100 Rh6BG310200 Rh6CG299600 Rh6CG299800 Rh6CG300000 Rh6CG300200 Rh6CG300300 Rh6CG317100 Rh6CG317300 Rh6CG317500 Rh6CG317700 Rh6CG317800 Rh6CG318200 Rh6DG302000 Rh6DG302100 Rh6DG302300 Rh6DG302500 Rh6DG302600 Rh6DG302700 Rh6DG303100
rosa_wichuraiana	Rw6G026230 Rw6G026240 Rw6G026260 Rw6G026280 Rw6G026300 Rw6G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1274
AatII	GACGTC	2 cut(s)	913, 1059
Acc36I	ACCTGC	1 cut(s)	149
AccB1I	GGYRCC	1 cut(s)	1119
AccII	CGCG	2 cut(s)	129, 513
AciI	CCGC	7 cut(s)	57, 127, 415, 543, 1126, 1279, 1417
AclWI	GGATC	1 cut(s)	112
AcoI	YGGCCR	1 cut(s)	1050
AcuI	CTGAAG	3 cut(s)	174, 1029, 1045
AcyI	GRCGYC	4 cut(s)	70, 430, 910, 1056
AdeI	CACNNNGTG	1 cut(s)	1318
AfaI	GTAC	5 cut(s)	287, 294, 1154, 1352, 1544
AfiI	CCNNNNNNNGG	6 cut(s)	409, 424, 1073, 1416, 1432, 1468
AflIII	ACRYGT	1 cut(s)	511
AgsI	TTSAA	5 cut(s)	221, 482, 685, 1189, 1363
AjiI	CACGTC	1 cut(s)	1432
AjnI	CCWGG	7 cut(s)	186, 325, 557, 864, 1226, 1272, 1281
Alw21I	GWGCWC	1 cut(s)	1517
Alw26I	GTCTC	8 cut(s)	143, 332, 567, 703, 803, 917, 1250, 1493
AlwI	GGATC	1 cut(s)	112
ApeKI	GCWGC	3 cut(s)	382, 763, 859
AspLEI	GCGC	2 cut(s)	206, 1226
AspS9I	GGNCC	5 cut(s)	412, 1276, 1404, 1435, 1459
AsuHPI	GGTGA	4 cut(s)	220, 536, 587, 1252
AvaII	GGWCC	4 cut(s)	1276, 1404, 1435, 1459
BaeGI	GKGCMC	1 cut(s)	1423
BanI	GGYRCC	1 cut(s)	1119
BanII	GRGCYC	1 cut(s)	1517
BarI	GAAGNNNNNNTAC	2 cut(s)	1343, 1375
BbsI	GAAGAC	2 cut(s)	1051, 1518
Bbv12I	GWGCWC	1 cut(s)	1517
BbvI	GCAGC	3 cut(s)	394, 775, 871
BccI	CCATC	3 cut(s)	310, 1268, 1450
BceAI	ACGGC	3 cut(s)	70, 785, 1267
BcgI	CGANNNNNNTGC	4 cut(s)	1337, 1358, 1371, 1392
BciT130I	CCWGG	7 cut(s)	188, 327, 559, 866, 1228, 1274, 1283
BciVI	GTATCC	1 cut(s)	1337
BclI	TGATCA	1 cut(s)	1383
BcoDI	GTCTC	8 cut(s)	143, 332, 567, 703, 803, 917, 1250, 1493
BfaI	CTAG	2 cut(s)	311, 488
BfoI	RGCGCY	1 cut(s)	1227
BfuAI	ACCTGC	1 cut(s)	149
BfuI	GTATCC	1 cut(s)	1337
BglII	AGATCT	1 cut(s)	581
BisI	GCNGC	5 cut(s)	58, 383, 415, 764, 860
BlpI	GCTNAGC	1 cut(s)	61
BlsI	GCNGC	5 cut(s)	59, 384, 416, 765, 861
Bme1390I	CCNGG	7 cut(s)	188, 327, 559, 866, 1228, 1274, 1283
Bme18I	GGWCC	4 cut(s)	1276, 1404, 1435, 1459
BmgBI	CACGTC	1 cut(s)	1432
BmgT120I	GGNCC	5 cut(s)	412, 1276, 1404, 1435, 1459
BmiI	GGNNCC	3 cut(s)	413, 1121, 1478
BmrFI	CCNGG	7 cut(s)	188, 327, 559, 866, 1228, 1274, 1283
BmrI	ACTGGG	1 cut(s)	1525
BmsI	GCATC	1 cut(s)	1089
BmuI	ACTGGG	1 cut(s)	1525
BoxI	GACNNNNGTC	1 cut(s)	1409
BpiI	GAAGAC	2 cut(s)	1051, 1518
BpmI	CTGGAG	1 cut(s)	848
Bpu1102I	GCTNAGC	1 cut(s)	61
BpuEI	CTTGAG	3 cut(s)	1016, 1504, 1531
BsaHI	GRCGYC	4 cut(s)	70, 430, 910, 1056
BsaI	GGTCTC	3 cut(s)	567, 1250, 1493
BsaJI	CCNNGG	8 cut(s)	52, 275, 325, 644, 865, 932, 1227, 1282
BsaXI	ACNNNNNCTCC	2 cut(s)	256, 286
Bsc4I	CCNNNNNNNGG	6 cut(s)	409, 424, 1073, 1416, 1432, 1468
Bse118I	RCCGGY	1 cut(s)	1073
Bse1I	ACTGG	3 cut(s)	1184, 1531, 1550
Bse3DI	GCAATG	1 cut(s)	1353
BseBI	CCWGG	7 cut(s)	188, 327, 559, 866, 1228, 1274, 1283
BseDI	CCNNGG	8 cut(s)	52, 275, 325, 644, 865, 932, 1227, 1282
BseGI	GGATG	2 cut(s)	196, 321
BseLI	CCNNNNNNNGG	6 cut(s)	409, 424, 1073, 1416, 1432, 1468
BseMI	GCAATG	1 cut(s)	1353
BseMII	CTCAG	6 cut(s)	95, 327, 345, 1128, 1129, 1144
BseNI	ACTGG	3 cut(s)	1184, 1531, 1550
BseRI	GAGGAG	4 cut(s)	362, 809, 1013, 1507
BseSI	GKGCMC	1 cut(s)	1423
BseXI	GCAGC	3 cut(s)	394, 775, 871
BseYI	CCCAGC	1 cut(s)	855
Bsh1236I	CGCG	2 cut(s)	129, 513
Bsh1285I	CGRYCG	1 cut(s)	1078
BshNI	GGYRCC	1 cut(s)	1119
BsiEI	CGRYCG	1 cut(s)	1078
BsiHKAI	GWGCWC	1 cut(s)	1517
BsiSI	CCGG	2 cut(s)	546, 1074
BslFI	GGGAC	6 cut(s)	191, 441, 882, 921, 996, 1299
BslI	CCNNNNNNNGG	6 cut(s)	409, 424, 1073, 1416, 1432, 1468
BsmAI	GTCTC	8 cut(s)	143, 332, 567, 703, 803, 917, 1250, 1493
BsmBI	CGTCTC	2 cut(s)	703, 917
BsmFI	GGGAC	6 cut(s)	191, 441, 882, 921, 996, 1299
BsmI	GAATGC	1 cut(s)	1195
Bso31I	GGTCTC	3 cut(s)	567, 1250, 1493
Bsp1286I	GDGCHC	2 cut(s)	1423, 1517
Bsp1407I	TGTACA	2 cut(s)	292, 1152
Bsp143I	GATC	5 cut(s)	117, 581, 1020, 1200, 1383
Bsp1720I	GCTNAGC	1 cut(s)	61
BspACI	CCGC	7 cut(s)	57, 127, 415, 543, 1126, 1279, 1417
BspCNI	CTCAG	6 cut(s)	94, 328, 346, 1128, 1129, 1143
BspFNI	CGCG	2 cut(s)	129, 513
BspLI	GGNNCC	3 cut(s)	413, 1121, 1478
BspMI	ACCTGC	1 cut(s)	149
BspPI	GGATC	1 cut(s)	112
BspQI	GCTCTTC	1 cut(s)	1298
BspT107I	GGYRCC	1 cut(s)	1119
BspTNI	GGTCTC	3 cut(s)	567, 1250, 1493
BsrDI	GCAATG	1 cut(s)	1353
BsrFI	RCCGGY	1 cut(s)	1073
BsrGI	TGTACA	2 cut(s)	292, 1152
BsrI	ACTGG	3 cut(s)	1184, 1531, 1550
BssAI	RCCGGY	1 cut(s)	1073
BssECI	CCNNGG	8 cut(s)	52, 275, 325, 644, 865, 932, 1227, 1282
BssMI	GATC	5 cut(s)	117, 581, 1020, 1200, 1383
BssNI	GRCGYC	4 cut(s)	70, 430, 910, 1056
BssT1I	CCWWGG	2 cut(s)	275, 644
Bst2UI	CCWGG	7 cut(s)	188, 327, 559, 866, 1228, 1274, 1283
Bst4CI	ACNGT	4 cut(s)	143, 575, 936, 1463
Bst6I	CTCTTC	2 cut(s)	53, 1298
BstACI	GRCGYC	4 cut(s)	70, 430, 910, 1056
BstAUI	TGTACA	2 cut(s)	292, 1152
BstDEI	CTNAG	7 cut(s)	61, 81, 336, 354, 1115, 1130, 1137
BstDSI	CCRYGG	2 cut(s)	52, 932
BstEII	GGTNACC	1 cut(s)	665
BstF5I	GGATG	2 cut(s)	196, 321
BstFNI	CGCG	2 cut(s)	129, 513
BstH2I	RGCGCY	1 cut(s)	1227
BstHHI	GCGC	2 cut(s)	206, 1226
BstKTI	GATC	5 cut(s)	120, 584, 1023, 1203, 1386
BstMAI	GTCTC	8 cut(s)	143, 332, 567, 703, 803, 917, 1250, 1493
BstMBI	GATC	5 cut(s)	117, 581, 1020, 1200, 1383
BstMCI	CGRYCG	1 cut(s)	1078
BstMWI	GCNNNNNNNGC	3 cut(s)	212, 542, 769
BstNI	CCWGG	7 cut(s)	188, 327, 559, 866, 1228, 1274, 1283
BstPAI	GACNNNNGTC	1 cut(s)	1409
BstPI	GGTNACC	1 cut(s)	665
BstSCI	CCNGG	7 cut(s)	186, 325, 557, 864, 1226, 1272, 1281
BstSLI	GKGCMC	1 cut(s)	1423
BstUI	CGCG	2 cut(s)	129, 513
BstV1I	GCAGC	3 cut(s)	394, 775, 871
BstV2I	GAAGAC	2 cut(s)	1051, 1518
BstX2I	RGATCY	2 cut(s)	117, 581
BstYI	RGATCY	2 cut(s)	117, 581
BsuI	GTATCC	1 cut(s)	1337
BtgI	CCRYGG	2 cut(s)	52, 932
BtrI	CACGTC	1 cut(s)	1432
BtsCI	GGATG	2 cut(s)	196, 321
BtsI	GCAGTG	2 cut(s)	206, 1323
BtsIMutI	CAGTG	5 cut(s)	206, 1053, 1138, 1177, 1323
BveI	ACCTGC	1 cut(s)	149
CfoI	GCGC	2 cut(s)	206, 1226
Cfr10I	RCCGGY	1 cut(s)	1073
Cfr13I	GGNCC	5 cut(s)	412, 1276, 1404, 1435, 1459
CseI	GACGC	5 cut(s)	78, 438, 502, 519, 836
CsiI	ACCWGGT	2 cut(s)	557, 1272
Csp6I	GTAC	5 cut(s)	286, 293, 1153, 1351, 1543
CviAII	CATG	5 cut(s)	174, 1015, 1196, 1333, 1381
CviQI	GTAC	5 cut(s)	286, 293, 1153, 1351, 1543
DdeI	CTNAG	7 cut(s)	61, 81, 336, 354, 1115, 1130, 1137
DpnI	GATC	5 cut(s)	119, 583, 1022, 1202, 1385
DpnII	GATC	5 cut(s)	117, 581, 1020, 1200, 1383
DraIII	CACNNNGTG	1 cut(s)	1318
DrdI	GACNNNNNNGTC	1 cut(s)	1274
DseDI	GACNNNNNNGTC	1 cut(s)	1274
EaeI	YGGCCR	1 cut(s)	1050
Eam1104I	CTCTTC	2 cut(s)	53, 1298
EarI	CTCTTC	2 cut(s)	53, 1298
EciI	GGCGGA	2 cut(s)	1115, 1268
Ecl136II	GAGCTC	1 cut(s)	1515
Eco130I	CCWWGG	2 cut(s)	275, 644
Eco24I	GRGCYC	1 cut(s)	1517
Eco31I	GGTCTC	3 cut(s)	567, 1250, 1493
Eco47I	GGWCC	4 cut(s)	1276, 1404, 1435, 1459
Eco53kI	GAGCTC	1 cut(s)	1515
Eco57I	CTGAAG	3 cut(s)	174, 1029, 1045
Eco91I	GGTNACC	1 cut(s)	665
EcoICRI	GAGCTC	1 cut(s)	1515
EcoO109I	RGGNCCY	1 cut(s)	1404
EcoO65I	GGTNACC	1 cut(s)	665
EcoRII	CCWGG	7 cut(s)	186, 325, 557, 864, 1226, 1272, 1281
EcoT14I	CCWWGG	2 cut(s)	275, 644
EcoT38I	GRGCYC	1 cut(s)	1517
ErhI	CCWWGG	2 cut(s)	275, 644
Esp3I	CGTCTC	2 cut(s)	703, 917
FaeI	CATG	5 cut(s)	177, 1018, 1199, 1336, 1384
FaiI	YATR	7 cut(s)	175, 798, 1016, 1197, 1209, 1334, 1382
FaqI	GGGAC	6 cut(s)	191, 441, 882, 921, 996, 1299
FatI	CATG	5 cut(s)	173, 1014, 1195, 1332, 1380
FauI	CCCGC	3 cut(s)	134, 550, 1410
FbaI	TGATCA	1 cut(s)	1383
Fnu4HI	GCNGC	5 cut(s)	58, 383, 415, 764, 860
FokI	GGATG	2 cut(s)	203, 328
FriOI	GRGCYC	1 cut(s)	1517
Fsp4HI	GCNGC	5 cut(s)	58, 383, 415, 764, 860
FspBI	CTAG	2 cut(s)	311, 488
GlaI	GCGC	2 cut(s)	205, 1225
GluI	GCNGC	5 cut(s)	58, 383, 415, 764, 860
GsaI	CCCAGC	1 cut(s)	859
GsuI	CTGGAG	1 cut(s)	848
HaeII	RGCGCY	1 cut(s)	1227
HapII	CCGG	2 cut(s)	546, 1074
HgaI	GACGC	5 cut(s)	78, 438, 502, 519, 836
HhaI	GCGC	2 cut(s)	206, 1226
Hin1I	GRCGYC	4 cut(s)	70, 430, 910, 1056
Hin1II	CATG	5 cut(s)	177, 1018, 1199, 1336, 1384
Hin6I	GCGC	2 cut(s)	204, 1224
HinP1I	GCGC	2 cut(s)	204, 1224
HinfI	GANTC	4 cut(s)	170, 225, 350, 549
HpaII	CCGG	2 cut(s)	546, 1074
HphI	GGTGA	4 cut(s)	220, 536, 587, 1252
Hpy166II	GTNNAC	2 cut(s)	286, 1243
Hpy188I	TCNGA	5 cut(s)	165, 355, 364, 449, 1217
Hpy188III	TCNNGA	5 cut(s)	335, 708, 808, 914, 1363
Hpy8I	GTNNAC	2 cut(s)	286, 1243
Hpy99I	CGWCG	5 cut(s)	513, 830, 1058, 1301, 1433
HpyAV	CCTTC	7 cut(s)	257, 267, 515, 747, 1053, 1321, 1369
HpyCH4III	ACNGT	4 cut(s)	143, 575, 936, 1463
HpyCH4IV	ACGT	4 cut(s)	288, 910, 1056, 1431
HpyCH4V	TGCA	4 cut(s)	199, 800, 961, 1324
HpyF10VI	GCNNNNNNNGC	3 cut(s)	212, 542, 769
HpyF3I	CTNAG	7 cut(s)	61, 81, 336, 354, 1115, 1130, 1137
HpySE526I	ACGT	4 cut(s)	288, 910, 1056, 1431
Hsp92I	GRCGYC	4 cut(s)	70, 430, 910, 1056
Hsp92II	CATG	5 cut(s)	177, 1018, 1199, 1336, 1384
HspAI	GCGC	2 cut(s)	204, 1224
Ksp22I	TGATCA	1 cut(s)	1383
Kzo9I	GATC	5 cut(s)	117, 581, 1020, 1200, 1383
LguI	GCTCTTC	1 cut(s)	1298
LmnI	GCTCC	6 cut(s)	379, 756, 822, 867, 1000, 1520
Lsp1109I	GCAGC	3 cut(s)	394, 775, 871
LweI	GCATC	1 cut(s)	1089
MabI	ACCWGGT	2 cut(s)	557, 1272
MaeI	CTAG	2 cut(s)	311, 488
MaeII	ACGT	4 cut(s)	288, 910, 1056, 1431
MaeIII	GTNAC	6 cut(s)	550, 575, 595, 665, 936, 1533
MalI	GATC	5 cut(s)	119, 583, 1022, 1202, 1385
MboI	GATC	5 cut(s)	117, 581, 1020, 1200, 1383
MboII	GAAGA	6 cut(s)	40, 380, 1030, 1051, 1285, 1518
MflI	RGATCY	2 cut(s)	117, 581
MhlI	GDGCHC	2 cut(s)	1423, 1517
MluCI	AATT	1 cut(s)	443
MluI	ACGCGT	1 cut(s)	511
MlyI	GAGTC	3 cut(s)	179, 359, 558
MmeI	TCCRAC	1 cut(s)	143
MspA1I	CMGCKG	1 cut(s)	109
MspI	CCGG	2 cut(s)	546, 1074
MspR9I	CCNGG	7 cut(s)	188, 327, 559, 866, 1228, 1274, 1283
Mva1269I	GAATGC	1 cut(s)	1195
MvaI	CCWGG	7 cut(s)	188, 327, 559, 866, 1228, 1274, 1283
MvnI	CGCG	2 cut(s)	129, 513
MwoI	GCNNNNNNNGC	3 cut(s)	212, 542, 769
NdeII	GATC	5 cut(s)	117, 581, 1020, 1200, 1383
NlaIII	CATG	5 cut(s)	177, 1018, 1199, 1336, 1384
NlaIV	GGNNCC	3 cut(s)	413, 1121, 1478
NmuCI	GTSAC	4 cut(s)	550, 575, 936, 1533
PciSI	GCTCTTC	1 cut(s)	1298
PcsI	WCGNNNNNNNCGW	2 cut(s)	921, 1251
PctI	GAATGC	1 cut(s)	1195
PfeI	GAWTC	1 cut(s)	225
PflFI	GACNNNGTC	3 cut(s)	920, 1274, 1433
PkrI	GCNGC	5 cut(s)	59, 384, 416, 765, 861
PleI	GAGTC	3 cut(s)	178, 358, 557
PpsI	GAGTC	3 cut(s)	178, 358, 557
PpuMI	RGGWCCY	1 cut(s)	1404
PshAI	GACNNNNGTC	1 cut(s)	1409
Psp124BI	GAGCTC	1 cut(s)	1517
Psp5II	RGGWCCY	1 cut(s)	1404
Psp6I	CCWGG	7 cut(s)	186, 325, 557, 864, 1226, 1272, 1281
PspEI	GGTNACC	1 cut(s)	665
PspFI	CCCAGC	1 cut(s)	855
PspGI	CCWGG	7 cut(s)	186, 325, 557, 864, 1226, 1272, 1281
PspN4I	GGNNCC	3 cut(s)	413, 1121, 1478
PspPI	GGNCC	5 cut(s)	412, 1276, 1404, 1435, 1459
PspPPI	RGGWCCY	1 cut(s)	1404
PsrI	GAACNNNNNNTAC	2 cut(s)	1469, 1501
PsuI	RGATCY	2 cut(s)	117, 581
PsyI	GACNNNGTC	3 cut(s)	920, 1274, 1433
PvuII	CAGCTG	1 cut(s)	109
RsaI	GTAC	5 cut(s)	287, 294, 1154, 1352, 1544
RsaNI	GTAC	5 cut(s)	286, 293, 1153, 1351, 1543
SacI	GAGCTC	1 cut(s)	1517
SapI	GCTCTTC	1 cut(s)	1298
SatI	GCNGC	5 cut(s)	58, 383, 415, 764, 860
Sau3AI	GATC	5 cut(s)	117, 581, 1020, 1200, 1383
Sau96I	GGNCC	5 cut(s)	412, 1276, 1404, 1435, 1459
SchI	GAGTC	3 cut(s)	179, 359, 558
ScrFI	CCNGG	7 cut(s)	188, 327, 559, 866, 1228, 1274, 1283
SduI	GDGCHC	2 cut(s)	1423, 1517
SexAI	ACCWGGT	2 cut(s)	557, 1272
SfaNI	GCATC	1 cut(s)	1089
SinI	GGWCC	4 cut(s)	1276, 1404, 1435, 1459
SmlI	CTYRAG	3 cut(s)	995, 1510, 1519
SmoI	CTYRAG	3 cut(s)	995, 1510, 1519
Sse9I	AATT	1 cut(s)	443
SsiI	CCGC	7 cut(s)	57, 127, 415, 543, 1126, 1279, 1417
SspMI	CTAG	2 cut(s)	311, 488
SstI	GAGCTC	1 cut(s)	1517
StyD4I	CCNGG	7 cut(s)	186, 325, 557, 864, 1226, 1272, 1281
StyI	CCWWGG	2 cut(s)	275, 644
TaaI	ACNGT	4 cut(s)	143, 575, 936, 1463
TaiI	ACGT	4 cut(s)	291, 913, 1059, 1434
TaqI	TCGA	5 cut(s)	707, 807, 840, 915, 924
TaqII	GACCGA	2 cut(s)	507, 1382
TasI	AATT	1 cut(s)	443
TatI	WGTACW	3 cut(s)	292, 1152, 1350
TauI	GCSGC	2 cut(s)	60, 417
TfiI	GAWTC	1 cut(s)	225
TscAI	CASTG	5 cut(s)	206, 1053, 1138, 1184, 1323
TseFI	GTSAC	4 cut(s)	550, 575, 936, 1533
TseI	GCWGC	3 cut(s)	382, 763, 859
Tsp45I	GTSAC	4 cut(s)	550, 575, 936, 1533
TspDTI	ATGAA	2 cut(s)	381, 1031
TspGWI	ACGGA	2 cut(s)	1356, 1399
TspRI	CASTG	5 cut(s)	206, 1053, 1138, 1184, 1323
Tth111I	GACNNNGTC	3 cut(s)	920, 1274, 1433
VpaK11BI	GGWCC	4 cut(s)	1276, 1404, 1435, 1459
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1234
XspI	CTAG	2 cut(s)	311, 488
ZraI	GACGTC	2 cut(s)	911, 1057

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.