Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_co8505755.1

Orthogroup ID

OG0000311

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 1735

Gene Structure 1735 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_co8505755.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1426 bp

cattgagtgcgaagcaggtcggatcgagtcctgggactacaaccaggatgacttccagtgcgctggtgtcgccgttcagagaatcaccattgagagcaacgaccttcacttgccatcttacactaacaccccacgactagtttacgtcgtccaaggttggggtcatgtaggaatggtgctccctggctgtcccgagacttttgaagaatccgagcaatctgatgaggaacaacagggccagcaacaacaatggcaaggccaacgaggccgccagcaacagggacgccgacagggacaacaagagagctttgagcagctagaccgtcaccagagggtccgatgcgtcaaggaaggtgatgtcattgccatccccgccggagtcacctgctggactcacaaccacggtaaccaacctcttgtttttgtcagtctttttgatatgagcaacaagcgcaaccagcttgaccaaaacccaaggaaattctatcttgctggtaacccacaagatgagttcaaccaacaaggccaaagccaatggggacaacaaggacaacaaggctggggacaacaaggacaacaaggccgtggacaacaaggaaggaccaggcgccaacagcagggaaacaacaacaacaacatctttgccggcttcgacacacagctcctcgccgacgctctcaacatcgaccaacagacagcccagcggctccagggacagaacgacaacaggccacagattgttagggttaagggacgtttcgactttgtcgagccaccacgatcacagagggaggaaagacaaatgcaaggacaacaaatgcagggacaacaaggacagtatgaacaaaatggcatggaggagctcttctgtcacatgaagatgaaacagaacattggcaaacctaaaatggccgacgtctacagcccgcaagccggtcacatcagcaccctcaacagcttcagcatgcctattctcaggcgcctccgcctcagtgccgagagaggcttcttctacaacaacgctatctacagcccacactggaacttgaacgcccatgaagtctactacgtcatcaggggcagcgctagggttcaggtggtgaacgacaatggcgagaccatcttggacgaccaggtccgccagggacagctcttcatcgtgccacagaaccacgctgtgttgcaaaaggccatgagcaacggatacgagtacattgccttcaagaccgatgacaatgccatgatgaacaccatggctggcaggacctccgtcctgcgggcactccccgacgtggtcctcgccaacgcctatcagatggaccgtgaccaggcaaggaacctcaagtacaacaggcaggagaccgttgctttgagctcctcaaggtcttcccggtcccagaggaactggtgggctcttgatgcttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009791 GO:0009987 GO:0010033 GO:0010154 GO:0010431 GO:0021700 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033095 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045735 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071695 GO:0097305 GO:0097306 GO:0097708 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

474

Amino Acids

54.43

Weight (kDa)

6.88

Isoelectric Point (pI)

59.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03880 AT1G03890 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT5G44120 AT5G44120 AT5G44120
fragaria_vesca	FvH4_2g21390 FvH4_2g21390 FvH4_2g21400 FvH4_2g21410 FvH4_2g21410 FvH4_2g21410 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21440 FvH4_3g19080
malus_domestica	MD01G1024700.v1.1 MD05G1196800.v1.1 MD05G1196900.v1.1 MD17G1078200.v1.1
prunus_persica	Prupe.8G223300_v2.0.a1 Prupe.8G223400_v2.0.a1 Prupe.8G223400_v2.0.a1
pyrus_communis	pycom05g18380 pycom05g18390
rosa_chinensis	RchiOBHm_Chr6g0287991 RchiOBHm_Chr6g0288001 RchiOBHm_Chr6g0288021 RchiOBHm_Chr6g0288031 RchiOBHm_Chr6g0288041 RchiOBHm_Chr6g0288051 RchiOBHm_Chr6g0288071
rosa_laevigata	RLG00000012441 RLG00000012443 RLG00000012444 RLG00000012446 RLG00000012447 RLG00000012448
rosa_multiflora	Rmu_co8147412.1_g000001 Rmu_co8487931.1_g000001 Rmu_co8505755.1_g000001 Rmu_sc0001117.1_g000003 Rmu_sc0001117.1_g000005 Rmu_sc0001117.1_g000011 Rmu_sc0001117.1_g000013 Rmu_sc0005266.1_g000010 Rmu_sc0010960.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252330 Rroxscaffold_7G00180530 Rroxscaffold_7G00180550 Rroxscaffold_7G00180560 Rroxscaffold_7G00180570 Rroxscaffold_7G00180580 Rroxscaffold_7G00180590
rosa_rugosa	Rorug06G0041100 Rorug06G0041200 Rorug06G0041200 Rorug06G0041400 Rorug06G0193700 Rorug06G0193700 Rorug06G0193700 Rorug06G0193800 Rorug06G0193800 Rorug06G0193900 Rorug06G0194000 Rorug06G0194100
rosa_samantha	Rh6AG303300 Rh6AG303400 Rh6AG303500 Rh6AG303700 Rh6AG303800 Rh6AG303900 Rh6AG304100 Rh6AG304200 Rh6BG309500 Rh6BG309600 Rh6BG309700 Rh6BG309900 Rh6BG310000 Rh6BG310100 Rh6BG310200 Rh6CG299600 Rh6CG299800 Rh6CG300000 Rh6CG300200 Rh6CG300300 Rh6CG317100 Rh6CG317300 Rh6CG317500 Rh6CG317700 Rh6CG317800 Rh6CG318200 Rh6DG302000 Rh6DG302100 Rh6DG302300 Rh6DG302500 Rh6DG302600 Rh6DG302700 Rh6DG303100
rosa_wichuraiana	Rw6G026230 Rw6G026240 Rw6G026260 Rw6G026280 Rw6G026300 Rw6G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	393
AasI	GACNNNNNNGTC	1 cut(s)	1134
AatII	GACGTC	1 cut(s)	919
Acc36I	ACCTGC	2 cut(s)	6, 393
AccB1I	GGYRCC	2 cut(s)	607, 979
AccI	GTMKAC	2 cut(s)	919, 1063
AciI	CCGC	7 cut(s)	269, 373, 704, 927, 986, 1139, 1277
AclWI	GGATC	1 cut(s)	30
AcoI	YGGCCR	1 cut(s)	910
AcsI	RAATTY	1 cut(s)	480
AcuI	CTGAAG	1 cut(s)	944
AcyI	GRCGYC	4 cut(s)	284, 608, 916, 980
AdeI	CACNNNGTG	1 cut(s)	1178
AfaI	GTAC	2 cut(s)	1212, 1347
AfeI	AGCGCT	1 cut(s)	1085
AfiI	CCNNNNNNNGG	7 cut(s)	158, 278, 617, 933, 1276, 1292, 1328
AgsI	TTSAA	4 cut(s)	204, 515, 1049, 1223
AhlI	ACTAGT	1 cut(s)	137
AjiI	CACGTC	1 cut(s)	1292
AjnI	CCWGG	8 cut(s)	30, 43, 182, 603, 709, 1132, 1141, 1327
AluBI	AGCT	8 cut(s)	307, 317, 461, 662, 863, 958, 1151, 1375
AluI	AGCT	8 cut(s)	307, 317, 461, 662, 863, 958, 1151, 1375
Alw21I	GWGCWC	3 cut(s)	181, 865, 1377
Alw26I	GTCTC	3 cut(s)	189, 1110, 1353
AlwI	GGATC	1 cut(s)	30
Ama87I	CYCGRG	1 cut(s)	192
Aor51HI	AGCGCT	1 cut(s)	1085
AoxI	GGCC	8 cut(s)	236, 257, 266, 524, 581, 729, 910, 1189
ApeKI	GCWGC	2 cut(s)	314, 1081
ApoI	RAATTY	1 cut(s)	480
ArsI	GACNNNNNNTTYG	2 cut(s)	1352, 1384
AspLEI	GCGC	5 cut(s)	63, 454, 610, 982, 1086
AspS9I	GGNCC	8 cut(s)	236, 335, 601, 1136, 1264, 1295, 1319, 1393
AsuC2I	CCSGG	1 cut(s)	1391
AsuHPI	GGTGA	5 cut(s)	77, 318, 366, 374, 1112
AvaI	CYCGRG	1 cut(s)	192
AvaII	GGWCC	7 cut(s)	335, 601, 1136, 1264, 1295, 1319, 1393
BaeGI	GKGCMC	1 cut(s)	1283
BanI	GGYRCC	2 cut(s)	607, 979
BanII	GRGCYC	3 cut(s)	865, 1377, 1415
BarI	GAAGNNNNNNTAC	2 cut(s)	1203, 1235
BbsI	GAAGAC	1 cut(s)	1378
Bbv12I	GWGCWC	3 cut(s)	181, 865, 1377
BbvI	GCAGC	2 cut(s)	326, 1093
BccI	CCATC	4 cut(s)	122, 375, 1128, 1310
BceAI	ACGGC	2 cut(s)	57, 568
BcgI	CGANNNNNNTGC	4 cut(s)	1197, 1218, 1231, 1252
BciT130I	CCWGG	8 cut(s)	32, 45, 184, 605, 711, 1134, 1143, 1329
BciVI	GTATCC	1 cut(s)	1197
BcnI	CCSGG	1 cut(s)	1391
BcoDI	GTCTC	3 cut(s)	189, 1110, 1353
BcuI	ACTAGT	1 cut(s)	137
BfaI	CTAG	3 cut(s)	138, 318, 1087
BfmI	CTRYAG	2 cut(s)	920, 1028
BfoI	RGCGCY	3 cut(s)	611, 983, 1087
BfuAI	ACCTGC	2 cut(s)	6, 393
BfuI	GTATCC	1 cut(s)	1197
BglI	GCCNNNNNGGC	1 cut(s)	265
BisI	GCNGC	4 cut(s)	269, 315, 705, 1082
BlsI	GCNGC	4 cut(s)	270, 316, 706, 1083
Bme1390I	CCNGG	9 cut(s)	32, 45, 184, 605, 711, 1134, 1143, 1329, 1391
Bme18I	GGWCC	7 cut(s)	335, 601, 1136, 1264, 1295, 1319, 1393
BmeT110I	CYCGRG	1 cut(s)	192
BmgBI	CACGTC	1 cut(s)	1292
BmgT120I	GGNCC	8 cut(s)	236, 335, 601, 1136, 1264, 1295, 1319, 1393
BmiI	GGNNCC	6 cut(s)	336, 609, 708, 981, 1338, 1395
BmrFI	CCNGG	9 cut(s)	32, 45, 184, 605, 711, 1134, 1143, 1329, 1391
BmsI	GCATC	2 cut(s)	330, 1409
BoxI	GACNNNNGTC	1 cut(s)	1269
BpiI	GAAGAC	1 cut(s)	1378
BpmI	CTGGAG	1 cut(s)	693
BpuEI	CTTGAG	2 cut(s)	1326, 1364
BpuMI	CCSGG	1 cut(s)	1391
BsaHI	GRCGYC	4 cut(s)	284, 608, 916, 980
BsaI	GGTCTC	2 cut(s)	1110, 1353
BsaJI	CCNNGG	9 cut(s)	31, 152, 182, 401, 474, 584, 710, 1142, 1252
Bsc4I	CCNNNNNNNGG	7 cut(s)	158, 278, 617, 933, 1276, 1292, 1328
Bse118I	RCCGGY	2 cut(s)	645, 933
Bse1I	ACTGG	3 cut(s)	56, 1044, 1410
Bse3DI	GCAATG	2 cut(s)	361, 1213
BseBI	CCWGG	8 cut(s)	32, 45, 184, 605, 711, 1134, 1143, 1329
BseDI	CCNNGG	9 cut(s)	31, 152, 182, 401, 474, 584, 710, 1142, 1252
BseGI	GGATG	2 cut(s)	53, 367
BseLI	CCNNNNNNNGG	7 cut(s)	158, 278, 617, 933, 1276, 1292, 1328
BseMI	GCAATG	2 cut(s)	361, 1213
BseMII	CTCAG	2 cut(s)	989, 1004
BseNI	ACTGG	3 cut(s)	56, 1044, 1410
BseRI	GAGGAG	3 cut(s)	654, 873, 1367
BseSI	GKGCMC	1 cut(s)	1283
BseXI	GCAGC	2 cut(s)	326, 1093
BseYI	CCCAGC	2 cut(s)	559, 700
BshFI	GGCC	8 cut(s)	238, 259, 268, 526, 583, 731, 912, 1191
BshNI	GGYRCC	2 cut(s)	607, 979
BsiHKAI	GWGCWC	3 cut(s)	181, 865, 1377
BsiHKCI	CYCGRG	1 cut(s)	192
BsiSI	CCGG	4 cut(s)	376, 646, 934, 1391
BslI	CCNNNNNNNGG	7 cut(s)	158, 278, 617, 933, 1276, 1292, 1328
BsmAI	GTCTC	3 cut(s)	189, 1110, 1353
BsnI	GGCC	8 cut(s)	238, 259, 268, 526, 583, 731, 912, 1191
Bso31I	GGTCTC	2 cut(s)	1110, 1353
BsoBI	CYCGRG	1 cut(s)	192
Bsp1286I	GDGCHC	5 cut(s)	181, 865, 1283, 1377, 1415
Bsp143I	GATC	2 cut(s)	22, 780
Bsp19I	CCATGG	1 cut(s)	1252
BspACI	CCGC	7 cut(s)	269, 373, 704, 927, 986, 1139, 1277
BspANI	GGCC	8 cut(s)	238, 259, 268, 526, 583, 731, 912, 1191
BspCNI	CTCAG	2 cut(s)	988, 1003
BspLI	GGNNCC	6 cut(s)	336, 609, 708, 981, 1338, 1395
BspMI	ACCTGC	2 cut(s)	6, 393
BspPI	GGATC	1 cut(s)	30
BspQI	GCTCTTC	2 cut(s)	870, 1158
BspT107I	GGYRCC	2 cut(s)	607, 979
BspTNI	GGTCTC	2 cut(s)	1110, 1353
BsrDI	GCAATG	2 cut(s)	361, 1213
BsrFI	RCCGGY	2 cut(s)	645, 933
BsrI	ACTGG	3 cut(s)	56, 1044, 1410
BssAI	RCCGGY	2 cut(s)	645, 933
BssECI	CCNNGG	9 cut(s)	31, 152, 182, 401, 474, 584, 710, 1142, 1252
BssMI	GATC	2 cut(s)	22, 780
BssNI	GRCGYC	4 cut(s)	284, 608, 916, 980
BssT1I	CCWWGG	3 cut(s)	152, 474, 1252
Bst2UI	CCWGG	8 cut(s)	32, 45, 184, 605, 711, 1134, 1143, 1329
Bst4CI	ACNGT	5 cut(s)	324, 405, 838, 1323, 1364
Bst6I	CTCTTC	2 cut(s)	870, 1158
BstACI	GRCGYC	4 cut(s)	284, 608, 916, 980
BstC8I	GCNNGC	8 cut(s)	240, 273, 647, 927, 931, 966, 1259, 1279
BstDEI	CTNAG	2 cut(s)	975, 990
BstDSI	CCRYGG	3 cut(s)	401, 584, 1252
BstEII	GGTNACC	2 cut(s)	405, 495
BstF5I	GGATG	2 cut(s)	53, 367
BstH2I	RGCGCY	3 cut(s)	611, 983, 1087
BstHHI	GCGC	5 cut(s)	63, 454, 610, 982, 1086
BstKTI	GATC	2 cut(s)	25, 783
BstMAI	GTCTC	3 cut(s)	189, 1110, 1353
BstMBI	GATC	2 cut(s)	22, 780
BstMWI	GCNNNNNNNGC	7 cut(s)	69, 265, 372, 451, 458, 614, 1419
BstNI	CCWGG	8 cut(s)	32, 45, 184, 605, 711, 1134, 1143, 1329
BstNSI	RCATGY	1 cut(s)	968
BstPAI	GACNNNNGTC	1 cut(s)	1269
BstPI	GGTNACC	2 cut(s)	405, 495
BstSCI	CCNGG	9 cut(s)	30, 43, 182, 603, 709, 1132, 1141, 1327, 1389
BstSFI	CTRYAG	2 cut(s)	920, 1028
BstSLI	GKGCMC	1 cut(s)	1283
BstV1I	GCAGC	2 cut(s)	326, 1093
BstV2I	GAAGAC	1 cut(s)	1378
BstXI	CCANNNNNNTGG	1 cut(s)	63
BsuI	GTATCC	1 cut(s)	1197
BsuRI	GGCC	8 cut(s)	238, 259, 268, 526, 583, 731, 912, 1191
BtgI	CCRYGG	3 cut(s)	401, 584, 1252
BtrI	CACGTC	1 cut(s)	1292
BtsCI	GGATG	2 cut(s)	53, 367
BtsIMutI	CAGTG	3 cut(s)	63, 998, 1037
BveI	ACCTGC	2 cut(s)	6, 393
Cac8I	GCNNGC	8 cut(s)	240, 273, 647, 927, 931, 966, 1259, 1279
CfoI	GCGC	5 cut(s)	63, 454, 610, 982, 1086
Cfr10I	RCCGGY	2 cut(s)	645, 933
Cfr13I	GGNCC	8 cut(s)	236, 335, 601, 1136, 1264, 1295, 1319, 1393
CseI	GACGC	3 cut(s)	292, 332, 681
CsiI	ACCWGGT	1 cut(s)	1132
Csp6I	GTAC	2 cut(s)	1211, 1346
CviAII	CATG	8 cut(s)	165, 854, 875, 965, 1056, 1193, 1241, 1253
CviQI	GTAC	2 cut(s)	1211, 1346
DdeI	CTNAG	2 cut(s)	975, 990
DinI	GGCGCC	2 cut(s)	609, 981
DpnI	GATC	2 cut(s)	24, 782
DpnII	GATC	2 cut(s)	22, 780
DraIII	CACNNNGTG	1 cut(s)	1178
DrdI	GACNNNNNNGTC	1 cut(s)	1134
DseDI	GACNNNNNNGTC	1 cut(s)	1134
EaeI	YGGCCR	1 cut(s)	910
Eam1104I	CTCTTC	2 cut(s)	870, 1158
EarI	CTCTTC	2 cut(s)	870, 1158
EciI	GGCGGA	2 cut(s)	975, 1128
Ecl136II	GAGCTC	2 cut(s)	863, 1375
Eco130I	CCWWGG	3 cut(s)	152, 474, 1252
Eco24I	GRGCYC	3 cut(s)	865, 1377, 1415
Eco31I	GGTCTC	2 cut(s)	1110, 1353
Eco47I	GGWCC	7 cut(s)	335, 601, 1136, 1264, 1295, 1319, 1393
Eco47III	AGCGCT	1 cut(s)	1085
Eco53kI	GAGCTC	2 cut(s)	863, 1375
Eco57I	CTGAAG	1 cut(s)	944
Eco88I	CYCGRG	1 cut(s)	192
Eco91I	GGTNACC	2 cut(s)	405, 495
EcoICRI	GAGCTC	2 cut(s)	863, 1375
EcoO109I	RGGNCCY	1 cut(s)	1264
EcoO65I	GGTNACC	2 cut(s)	405, 495
EcoRII	CCWGG	8 cut(s)	30, 43, 182, 603, 709, 1132, 1141, 1327
EcoT14I	CCWWGG	3 cut(s)	152, 474, 1252
EcoT38I	GRGCYC	3 cut(s)	865, 1377, 1415
EgeI	GGCGCC	2 cut(s)	609, 981
EheI	GGCGCC	2 cut(s)	609, 981
ErhI	CCWWGG	3 cut(s)	152, 474, 1252
FaeI	CATG	8 cut(s)	168, 857, 878, 968, 1059, 1196, 1244, 1256
FatI	CATG	8 cut(s)	164, 853, 874, 964, 1055, 1192, 1240, 1252
FauI	CCCGC	3 cut(s)	380, 934, 1270
FblI	GTMKAC	2 cut(s)	919, 1063
Fnu4HI	GCNGC	4 cut(s)	269, 315, 705, 1082
FokI	GGATG	2 cut(s)	60, 354
FriOI	GRGCYC	3 cut(s)	865, 1377, 1415
Fsp4HI	GCNGC	4 cut(s)	269, 315, 705, 1082
FspBI	CTAG	3 cut(s)	138, 318, 1087
GlaI	GCGC	5 cut(s)	62, 453, 609, 981, 1085
GluI	GCNGC	4 cut(s)	269, 315, 705, 1082
GsaI	CCCAGC	2 cut(s)	563, 704
GsuI	CTGGAG	1 cut(s)	693
HaeII	RGCGCY	3 cut(s)	611, 983, 1087
HaeIII	GGCC	8 cut(s)	238, 259, 268, 526, 583, 731, 912, 1191
HapII	CCGG	4 cut(s)	376, 646, 934, 1391
HgaI	GACGC	3 cut(s)	292, 332, 681
HhaI	GCGC	5 cut(s)	63, 454, 610, 982, 1086
Hin1I	GRCGYC	4 cut(s)	284, 608, 916, 980
Hin1II	CATG	8 cut(s)	168, 857, 878, 968, 1059, 1196, 1244, 1256
Hin6I	GCGC	5 cut(s)	61, 452, 608, 980, 1084
HinP1I	GCGC	5 cut(s)	61, 452, 608, 980, 1084
HinfI	GANTC	5 cut(s)	27, 82, 207, 379, 392
HpaII	CCGG	4 cut(s)	376, 646, 934, 1391
HphI	GGTGA	5 cut(s)	77, 318, 366, 374, 1112
Hpy166II	GTNNAC	5 cut(s)	143, 588, 920, 1064, 1103
Hpy188I	TCNGA	6 cut(s)	22, 79, 212, 221, 339, 1315
Hpy188III	TCNNGA	3 cut(s)	192, 1223, 1416
Hpy8I	GTNNAC	5 cut(s)	143, 588, 920, 1064, 1103
Hpy99I	CGWCG	4 cut(s)	150, 675, 918, 1293
HpyAV	CCTTC	4 cut(s)	114, 345, 592, 1229
HpyCH4III	ACNGT	5 cut(s)	324, 405, 838, 1323, 1364
HpyCH4IV	ACGT	5 cut(s)	145, 755, 916, 1069, 1291
HpyCH4V	TGCA	3 cut(s)	806, 821, 1184
HpyF10VI	GCNNNNNNNGC	7 cut(s)	69, 265, 372, 451, 458, 614, 1419
HpyF3I	CTNAG	2 cut(s)	975, 990
HpySE526I	ACGT	5 cut(s)	145, 755, 916, 1069, 1291
Hsp92I	GRCGYC	4 cut(s)	284, 608, 916, 980
Hsp92II	CATG	8 cut(s)	168, 857, 878, 968, 1059, 1196, 1244, 1256
HspAI	GCGC	5 cut(s)	61, 452, 608, 980, 1084
KasI	GGCGCC	2 cut(s)	607, 979
KroI	GCCGGC	1 cut(s)	645
KroNI	GCCGGC	1 cut(s)	647
Kzo9I	GATC	2 cut(s)	22, 780
LguI	GCTCTTC	2 cut(s)	870, 1158
LmnI	GCTCC	5 cut(s)	184, 667, 712, 860, 1380
Lsp1109I	GCAGC	2 cut(s)	326, 1093
LweI	GCATC	2 cut(s)	330, 1409
MabI	ACCWGGT	1 cut(s)	1132
MaeI	CTAG	3 cut(s)	138, 318, 1087
MaeII	ACGT	5 cut(s)	145, 755, 916, 1069, 1291
MaeIII	GTNAC	7 cut(s)	324, 380, 405, 495, 870, 936, 1323
MalI	GATC	2 cut(s)	24, 782
MboI	GATC	2 cut(s)	22, 780
MboII	GAAGA	6 cut(s)	216, 857, 890, 1001, 1145, 1378
MhlI	GDGCHC	5 cut(s)	181, 865, 1283, 1377, 1415
MluCI	AATT	1 cut(s)	480
Mly113I	GGCGCC	2 cut(s)	608, 980
MlyI	GAGTC	3 cut(s)	36, 386, 388
MroNI	GCCGGC	1 cut(s)	645
MseI	TTAA	2 cut(s)	748, 1424
MslI	CAYNNNNRTG	1 cut(s)	879
MspA1I	CMGCKG	1 cut(s)	704
MspI	CCGG	4 cut(s)	376, 646, 934, 1391
MspR9I	CCNGG	9 cut(s)	32, 45, 184, 605, 711, 1134, 1143, 1329, 1391
MvaI	CCWGG	8 cut(s)	32, 45, 184, 605, 711, 1134, 1143, 1329
MwoI	GCNNNNNNNGC	7 cut(s)	69, 265, 372, 451, 458, 614, 1419
NaeI	GCCGGC	1 cut(s)	647
NarI	GGCGCC	2 cut(s)	608, 980
NciI	CCSGG	1 cut(s)	1391
NcoI	CCATGG	1 cut(s)	1252
NdeII	GATC	2 cut(s)	22, 780
NgoMIV	GCCGGC	1 cut(s)	645
NlaIII	CATG	8 cut(s)	168, 857, 878, 968, 1059, 1196, 1244, 1256
NlaIV	GGNNCC	6 cut(s)	336, 609, 708, 981, 1338, 1395
NmeAIII	GCCGAG	1 cut(s)	1022
NmuCI	GTSAC	5 cut(s)	324, 380, 870, 936, 1323
NspI	RCATGY	1 cut(s)	968
PaeI	GCATGC	1 cut(s)	968
PaqCI	CACCTGC	1 cut(s)	393
PciSI	GCTCTTC	2 cut(s)	870, 1158
PcsI	WCGNNNNNNNCGW	2 cut(s)	766, 1111
PdiI	GCCGGC	1 cut(s)	647
PfeI	GAWTC	2 cut(s)	82, 207
PflFI	GACNNNGTC	3 cut(s)	765, 1134, 1293
PkrI	GCNGC	4 cut(s)	270, 316, 706, 1083
PleI	GAGTC	3 cut(s)	35, 386, 387
PluTI	GGCGCC	2 cut(s)	611, 983
PpsI	GAGTC	3 cut(s)	35, 386, 387
PpuMI	RGGWCCY	1 cut(s)	1264
PshAI	GACNNNNGTC	1 cut(s)	1269
Psp124BI	GAGCTC	2 cut(s)	865, 1377
Psp5II	RGGWCCY	1 cut(s)	1264
Psp6I	CCWGG	8 cut(s)	30, 43, 182, 603, 709, 1132, 1141, 1327
PspEI	GGTNACC	2 cut(s)	405, 495
PspFI	CCCAGC	2 cut(s)	559, 700
PspGI	CCWGG	8 cut(s)	30, 43, 182, 603, 709, 1132, 1141, 1327
PspN4I	GGNNCC	6 cut(s)	336, 609, 708, 981, 1338, 1395
PspPI	GGNCC	8 cut(s)	236, 335, 601, 1136, 1264, 1295, 1319, 1393
PspPPI	RGGWCCY	1 cut(s)	1264
PsrI	GAACNNNNNNTAC	2 cut(s)	1329, 1361
PsyI	GACNNNGTC	3 cut(s)	765, 1134, 1293
RsaI	GTAC	2 cut(s)	1212, 1347
RsaNI	GTAC	2 cut(s)	1211, 1346
RseI	CAYNNNNRTG	1 cut(s)	879
SacI	GAGCTC	2 cut(s)	865, 1377
SapI	GCTCTTC	2 cut(s)	870, 1158
SaqAI	TTAA	2 cut(s)	748, 1424
SatI	GCNGC	4 cut(s)	269, 315, 705, 1082
Sau3AI	GATC	2 cut(s)	22, 780
Sau96I	GGNCC	8 cut(s)	236, 335, 601, 1136, 1264, 1295, 1319, 1393
SchI	GAGTC	3 cut(s)	36, 386, 388
ScrFI	CCNGG	9 cut(s)	32, 45, 184, 605, 711, 1134, 1143, 1329, 1391
SduI	GDGCHC	5 cut(s)	181, 865, 1283, 1377, 1415
SexAI	ACCWGGT	1 cut(s)	1132
SfaNI	GCATC	2 cut(s)	330, 1409
SfcI	CTRYAG	2 cut(s)	920, 1028
SfiI	GGCCNNNNNGGCC	1 cut(s)	265
SfoI	GGCGCC	2 cut(s)	609, 981
SinI	GGWCC	7 cut(s)	335, 601, 1136, 1264, 1295, 1319, 1393
SmiMI	CAYNNNNRTG	1 cut(s)	879
SmlI	CTYRAG	2 cut(s)	1341, 1379
SmoI	CTYRAG	2 cut(s)	1341, 1379
SpeI	ACTAGT	1 cut(s)	137
SphI	GCATGC	1 cut(s)	968
Sse9I	AATT	1 cut(s)	480
SsiI	CCGC	7 cut(s)	269, 373, 704, 927, 986, 1139, 1277
SspDI	GGCGCC	2 cut(s)	607, 979
SspMI	CTAG	3 cut(s)	138, 318, 1087
SstI	GAGCTC	2 cut(s)	865, 1377
StyD4I	CCNGG	9 cut(s)	30, 43, 182, 603, 709, 1132, 1141, 1327, 1389
StyI	CCWWGG	3 cut(s)	152, 474, 1252
TaaI	ACNGT	5 cut(s)	324, 405, 838, 1323, 1364
TaiI	ACGT	5 cut(s)	148, 758, 919, 1072, 1294
TaqI	TCGA	5 cut(s)	25, 652, 685, 760, 769
TaqII	GACCGA	1 cut(s)	1242
TasI	AATT	1 cut(s)	480
TatI	WGTACW	2 cut(s)	1210, 1345
TauI	GCSGC	2 cut(s)	271, 707
TfiI	GAWTC	2 cut(s)	82, 207
Tru1I	TTAA	2 cut(s)	748, 1424
Tru9I	TTAA	2 cut(s)	748, 1424
TscAI	CASTG	3 cut(s)	63, 998, 1044
TseFI	GTSAC	5 cut(s)	324, 380, 870, 936, 1323
TseI	GCWGC	2 cut(s)	314, 1081
Tsp45I	GTSAC	5 cut(s)	324, 380, 870, 936, 1323
TspDTI	ATGAA	6 cut(s)	856, 891, 897, 1072, 1145, 1260
TspGWI	ACGGA	2 cut(s)	1216, 1259
TspRI	CASTG	3 cut(s)	63, 998, 1044
Tth111I	GACNNNGTC	3 cut(s)	765, 1134, 1293
VpaK11BI	GGWCC	7 cut(s)	335, 601, 1136, 1264, 1295, 1319, 1393
XapI	RAATTY	1 cut(s)	480
XceI	RCATGY	1 cut(s)	968
XmiI	GTMKAC	2 cut(s)	919, 1063
XspI	CTAG	3 cut(s)	138, 318, 1087
ZraI	GACGTC	1 cut(s)	917

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.