Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0000311

Physical Location & Seq

Genomic Coordinates Reverse (-)

19938733 .. 19940169

Gene Structure 1437 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00180590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1182 bp

ATGGTGATACCCGGCTGTCCAGAGACATTTGAGGAGTCCGAGCAATCCGACGAGGAGCAACAGGGCTCGCAACAACAACCAGGGCAAGGCCAACAAGGCCGACAAGGCCGCCAGCAACAGGGACGCCGACAAGGACAATATGGACGAGGAGGCCAACAGGGAGAACAAGAGAGCTTCGAACAGCTAGACCGACACCAGAGGGTGCGACGCGTCAAGGAAGGTGATGTTATCGCCATCCCCGCCGGAGTCACAACCTGGTCCTACAACGACGGTGACCAATCTCTCATTTTTAGATTCTATCTGGCTGGTAACCCACAAGATGAGTTCAACCAACAAGGCCAAAGCCGAGGCCAAGCGAGACAACAACAAGAACAACAGGGAAGGAGCAGACGCCAACAACAGGGAAACAACAACAACAATATCTTTGCCGGATTCGACACCAGACTCCTCGCCGATGCTCTCAACATCGACCAACAGACCGCTCAGCAGCTCCAGGGACAGAACGACAACAGGCCACAGATTGTTAGGGTTCAGGGACGTCTCGACTTCATCCAGCCCCCTGAGTCAATGAGGGAGGAAAGACAACTGCAAGGACAACAGGGACAGAATGGTTTTGAGGAGGTTTTCTGCCACATGAAGATCAAGCAGAACATCGGCAAGCCTTCATTGGCCGACGTCTTCAGCCCGCAAGCCGGTCGCATCAGCACCCTCAACGGCTTCAGCATGCCTATTCTCAGGCACCTCCGCCTCAGTGCTGAGAGAGGCTTCTTGTACAACAATGCTATCCACAGCCCACACTGGAACTTGAATGCCCATGAGATAGTCTATGTCATCAGAGGTAGCGCCAGGGTTCAGGTAGTGAACGACAACGGCGAGACCATCTTGGACGACCAGGTCCGCCAGGGACAGCTCTTCGTCGTGCCACAGAACCACGCCGTGTTGCAGAAGGCCATGAGCAACGGATACGAGTACATTGCCTTCAAGACTGAGGACAATGCCATGATGAACACCATGGCTGGCAGGACCTCCGTTCTGCGGGCACTTCCCGACGTGGTCCTAGCCAACGCTTACCAGATGGACCGTGAGCAGGCAAGGAACCTCAAGTACAACAGGCAAGAGACCCTTGCCTTGAGCTCCTCAAGGTCTTTCCAGTCACAGAGGAGTTGGTGGGCTATAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009791 GO:0009987 GO:0010033 GO:0010154 GO:0010431 GO:0021700 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033095 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045735 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071695 GO:0097305 GO:0097306 GO:0097708 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

393

Amino Acids

44.72

Weight (kDa)

7.08

Isoelectric Point (pI)

64.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	217 - 364	1.2e-38	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03880 AT1G03890 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT5G44120 AT5G44120 AT5G44120
fragaria_vesca	FvH4_2g21390 FvH4_2g21390 FvH4_2g21400 FvH4_2g21410 FvH4_2g21410 FvH4_2g21410 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21440 FvH4_3g19080
malus_domestica	MD01G1024700.v1.1 MD05G1196800.v1.1 MD05G1196900.v1.1 MD17G1078200.v1.1
prunus_persica	Prupe.8G223300_v2.0.a1 Prupe.8G223400_v2.0.a1 Prupe.8G223400_v2.0.a1
pyrus_communis	pycom05g18380 pycom05g18390
rosa_chinensis	RchiOBHm_Chr6g0287991 RchiOBHm_Chr6g0288001 RchiOBHm_Chr6g0288021 RchiOBHm_Chr6g0288031 RchiOBHm_Chr6g0288041 RchiOBHm_Chr6g0288051 RchiOBHm_Chr6g0288071
rosa_laevigata	RLG00000012441 RLG00000012443 RLG00000012444 RLG00000012446 RLG00000012447 RLG00000012448
rosa_multiflora	Rmu_co8147412.1_g000001 Rmu_co8487931.1_g000001 Rmu_co8505755.1_g000001 Rmu_sc0001117.1_g000003 Rmu_sc0001117.1_g000005 Rmu_sc0001117.1_g000011 Rmu_sc0001117.1_g000013 Rmu_sc0005266.1_g000010 Rmu_sc0010960.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252330 Rroxscaffold_7G00180530 Rroxscaffold_7G00180550 Rroxscaffold_7G00180560 Rroxscaffold_7G00180570 Rroxscaffold_7G00180580 Rroxscaffold_7G00180590
rosa_rugosa	Rorug06G0041100 Rorug06G0041200 Rorug06G0041200 Rorug06G0041400 Rorug06G0193700 Rorug06G0193700 Rorug06G0193700 Rorug06G0193800 Rorug06G0193800 Rorug06G0193900 Rorug06G0194000 Rorug06G0194100
rosa_samantha	Rh6AG303300 Rh6AG303400 Rh6AG303500 Rh6AG303700 Rh6AG303800 Rh6AG303900 Rh6AG304100 Rh6AG304200 Rh6BG309500 Rh6BG309600 Rh6BG309700 Rh6BG309900 Rh6BG310000 Rh6BG310100 Rh6BG310200 Rh6CG299600 Rh6CG299800 Rh6CG300000 Rh6CG300200 Rh6CG300300 Rh6CG317100 Rh6CG317300 Rh6CG317500 Rh6CG317700 Rh6CG317800 Rh6CG318200 Rh6DG302000 Rh6DG302100 Rh6DG302300 Rh6DG302500 Rh6DG302600 Rh6DG302700 Rh6DG303100
rosa_wichuraiana	Rw6G026230 Rw6G026240 Rw6G026260 Rw6G026280 Rw6G026300 Rw6G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	893
AatII	GACGTC	2 cut(s)	541, 678
AccB1I	GGYRCC	1 cut(s)	738
AccBSI	CCGCTC	1 cut(s)	482
AccII	CGCG	1 cut(s)	210
AciI	CCGC	7 cut(s)	109, 240, 480, 686, 745, 898, 1036
AcoI	YGGCCR	1 cut(s)	669
AcuI	CTGAAG	2 cut(s)	664, 703
AcyI	GRCGYC	4 cut(s)	124, 391, 538, 675
AdeI	CACNNNGTG	1 cut(s)	937
AfaI	GTAC	3 cut(s)	773, 971, 1106
AfiI	CCNNNNNNNGG	6 cut(s)	86, 118, 400, 692, 1035, 1087
AflIII	ACRYGT	1 cut(s)	208
AgsI	TTSAA	3 cut(s)	328, 808, 982
AjiI	CACGTC	1 cut(s)	1051
AjnI	CCWGG	6 cut(s)	79, 254, 492, 845, 891, 900
AluBI	AGCT	6 cut(s)	174, 184, 490, 910, 1134, 1178
AluI	AGCT	6 cut(s)	174, 184, 490, 910, 1134, 1178
Alw21I	GWGCWC	1 cut(s)	1136
Alw26I	GTCTC	5 cut(s)	17, 352, 545, 869, 1112
AoxI	GGCC	9 cut(s)	88, 97, 106, 151, 337, 349, 512, 669, 948
ApeKI	GCWGC	1 cut(s)	487
AspLEI	GCGC	1 cut(s)	845
AspS9I	GGNCC	5 cut(s)	258, 895, 1023, 1054, 1078
AsuC2I	CCSGG	1 cut(s)	12
AsuHPI	GGTGA	3 cut(s)	16, 233, 284
AsuII	TTCGAA	1 cut(s)	177
AvaII	GGWCC	5 cut(s)	258, 895, 1023, 1054, 1078
BaeGI	GKGCMC	1 cut(s)	1042
BanI	GGYRCC	1 cut(s)	738
BanII	GRGCYC	2 cut(s)	68, 1136
BarI	GAAGNNNNNNTAC	2 cut(s)	962, 994
BbsI	GAAGAC	1 cut(s)	670
Bbv12I	GWGCWC	1 cut(s)	1136
BbvI	GCAGC	1 cut(s)	499
BccI	CCATC	3 cut(s)	242, 887, 1069
BceAI	ACGGC	3 cut(s)	730, 886, 920
BcgI	CGANNNNNNTGC	4 cut(s)	677, 711, 956, 990
BciT130I	CCWGG	6 cut(s)	81, 256, 494, 847, 893, 902
BciVI	GTATCC	1 cut(s)	956
BcnI	CCSGG	1 cut(s)	12
BcoDI	GTCTC	5 cut(s)	17, 352, 545, 869, 1112
BfaI	CTAG	2 cut(s)	185, 1058
BfmI	CTRYAG	1 cut(s)	1173
BfoI	RGCGCY	1 cut(s)	846
BfuI	GTATCC	1 cut(s)	956
BglI	GCCNNNNNGGC	2 cut(s)	96, 105
BisI	GCNGC	2 cut(s)	109, 488
BlpI	GCTNAGC	1 cut(s)	483
BlsI	GCNGC	2 cut(s)	110, 489
Bme1390I	CCNGG	7 cut(s)	12, 81, 256, 494, 847, 893, 902
Bme18I	GGWCC	5 cut(s)	258, 895, 1023, 1054, 1078
BmgBI	CACGTC	1 cut(s)	1051
BmgT120I	GGNCC	5 cut(s)	258, 895, 1023, 1054, 1078
BmiI	GGNNCC	2 cut(s)	740, 1097
BmrFI	CCNGG	7 cut(s)	12, 81, 256, 494, 847, 893, 902
BmsI	GCATC	2 cut(s)	445, 708
BpiI	GAAGAC	1 cut(s)	670
BpmI	CTGGAG	1 cut(s)	476
Bpu1102I	GCTNAGC	1 cut(s)	483
Bpu14I	TTCGAA	1 cut(s)	177
BpuEI	CTTGAG	3 cut(s)	1085, 1123, 1150
BpuMI	CCSGG	1 cut(s)	12
BsaHI	GRCGYC	4 cut(s)	124, 391, 538, 675
BsaI	GGTCTC	2 cut(s)	869, 1112
BsaJI	CCNNGG	6 cut(s)	80, 346, 493, 846, 901, 1011
Bsc4I	CCNNNNNNNGG	6 cut(s)	86, 118, 400, 692, 1035, 1087
Bse118I	RCCGGY	1 cut(s)	692
Bse1I	ACTGG	2 cut(s)	803, 1150
Bse3DI	GCAATG	1 cut(s)	972
BseBI	CCWGG	6 cut(s)	81, 256, 494, 847, 893, 902
BseDI	CCNNGG	6 cut(s)	80, 346, 493, 846, 901, 1011
BseGI	GGATG	2 cut(s)	234, 549
BseLI	CCNNNNNNNGG	6 cut(s)	86, 118, 400, 692, 1035, 1087
BseMI	GCAATG	1 cut(s)	972
BseMII	CTCAG	6 cut(s)	497, 552, 747, 748, 763, 978
BseNI	ACTGG	2 cut(s)	803, 1150
BseRI	GAGGAG	7 cut(s)	47, 68, 162, 437, 632, 1126, 1174
BseSI	GKGCMC	1 cut(s)	1042
BseXI	GCAGC	1 cut(s)	499
Bsh1236I	CGCG	1 cut(s)	210
Bsh1285I	CGRYCG	1 cut(s)	697
BshFI	GGCC	9 cut(s)	90, 99, 108, 153, 339, 351, 514, 671, 950
BshNI	GGYRCC	1 cut(s)	738
BsiEI	CGRYCG	1 cut(s)	697
BsiHKAI	GWGCWC	1 cut(s)	1136
BsiSI	CCGG	4 cut(s)	12, 243, 429, 693
BslFI	GGGAC	5 cut(s)	135, 510, 549, 615, 918
BslI	CCNNNNNNNGG	6 cut(s)	86, 118, 400, 692, 1035, 1087
BsmAI	GTCTC	5 cut(s)	17, 352, 545, 869, 1112
BsmBI	CGTCTC	1 cut(s)	545
BsmFI	GGGAC	5 cut(s)	135, 510, 549, 615, 918
BsmI	GAATGC	1 cut(s)	814
BsnI	GGCC	9 cut(s)	90, 99, 108, 153, 339, 351, 514, 671, 950
Bso31I	GGTCTC	2 cut(s)	869, 1112
Bsp119I	TTCGAA	1 cut(s)	177
Bsp1286I	GDGCHC	3 cut(s)	68, 1042, 1136
Bsp1407I	TGTACA	1 cut(s)	771
Bsp143I	GATC	1 cut(s)	639
Bsp1720I	GCTNAGC	1 cut(s)	483
Bsp19I	CCATGG	1 cut(s)	1011
BspACI	CCGC	7 cut(s)	109, 240, 480, 686, 745, 898, 1036
BspANI	GGCC	9 cut(s)	90, 99, 108, 153, 339, 351, 514, 671, 950
BspCNI	CTCAG	6 cut(s)	496, 553, 747, 748, 762, 979
BspFNI	CGCG	1 cut(s)	210
BspLI	GGNNCC	2 cut(s)	740, 1097
BspQI	GCTCTTC	1 cut(s)	917
BspT104I	TTCGAA	1 cut(s)	177
BspT107I	GGYRCC	1 cut(s)	738
BspTNI	GGTCTC	2 cut(s)	869, 1112
BsrBI	CCGCTC	1 cut(s)	482
BsrDI	GCAATG	1 cut(s)	972
BsrFI	RCCGGY	1 cut(s)	692
BsrGI	TGTACA	1 cut(s)	771
BsrI	ACTGG	2 cut(s)	803, 1150
BssAI	RCCGGY	1 cut(s)	692
BssECI	CCNNGG	6 cut(s)	80, 346, 493, 846, 901, 1011
BssMI	GATC	1 cut(s)	639
BssNI	GRCGYC	4 cut(s)	124, 391, 538, 675
BssT1I	CCWWGG	1 cut(s)	1011
Bst2UI	CCWGG	6 cut(s)	81, 256, 494, 847, 893, 902
Bst4CI	ACNGT	2 cut(s)	272, 1082
Bst6I	CTCTTC	1 cut(s)	917
BstACI	GRCGYC	4 cut(s)	124, 391, 538, 675
BstAUI	TGTACA	1 cut(s)	771
BstBI	TTCGAA	1 cut(s)	177
BstC8I	GCNNGC	9 cut(s)	68, 113, 659, 686, 690, 725, 1018, 1038, 1089
BstDEI	CTNAG	6 cut(s)	483, 561, 734, 749, 756, 987
BstDSI	CCRYGG	1 cut(s)	1011
BstEII	GGTNACC	2 cut(s)	272, 308
BstF5I	GGATG	2 cut(s)	234, 549
BstFNI	CGCG	1 cut(s)	210
BstH2I	RGCGCY	1 cut(s)	846
BstHHI	GCGC	1 cut(s)	845
BstKTI	GATC	1 cut(s)	642
BstMAI	GTCTC	5 cut(s)	17, 352, 545, 869, 1112
BstMBI	GATC	1 cut(s)	639
BstMCI	CGRYCG	1 cut(s)	697
BstMWI	GCNNNNNNNGC	3 cut(s)	96, 105, 239
BstNI	CCWGG	6 cut(s)	81, 256, 494, 847, 893, 902
BstNSI	RCATGY	1 cut(s)	727
BstPI	GGTNACC	2 cut(s)	272, 308
BstSCI	CCNGG	7 cut(s)	10, 79, 254, 492, 845, 891, 900
BstSFI	CTRYAG	1 cut(s)	1173
BstSLI	GKGCMC	1 cut(s)	1042
BstUI	CGCG	1 cut(s)	210
BstV1I	GCAGC	1 cut(s)	499
BstV2I	GAAGAC	1 cut(s)	670
BsuI	GTATCC	1 cut(s)	956
BsuRI	GGCC	9 cut(s)	90, 99, 108, 153, 339, 351, 514, 671, 950
BtgI	CCRYGG	1 cut(s)	1011
BtrI	CACGTC	1 cut(s)	1051
BtsCI	GGATG	2 cut(s)	234, 549
BtsIMutI	CAGTG	2 cut(s)	757, 796
Cac8I	GCNNGC	9 cut(s)	68, 113, 659, 686, 690, 725, 1018, 1038, 1089
CfoI	GCGC	1 cut(s)	845
Cfr10I	RCCGGY	1 cut(s)	692
Cfr13I	GGNCC	5 cut(s)	258, 895, 1023, 1054, 1078
CseI	GACGC	4 cut(s)	132, 199, 216, 399
CsiI	ACCWGGT	2 cut(s)	254, 891
Csp6I	GTAC	3 cut(s)	772, 970, 1105
CviAII	CATG	6 cut(s)	634, 724, 815, 952, 1000, 1012
CviQI	GTAC	3 cut(s)	772, 970, 1105
DdeI	CTNAG	6 cut(s)	483, 561, 734, 749, 756, 987
DpnI	GATC	1 cut(s)	641
DpnII	GATC	1 cut(s)	639
DraIII	CACNNNGTG	1 cut(s)	937
DrdI	GACNNNNNNGTC	1 cut(s)	893
DseDI	GACNNNNNNGTC	1 cut(s)	893
EaeI	YGGCCR	1 cut(s)	669
Eam1104I	CTCTTC	1 cut(s)	917
EarI	CTCTTC	1 cut(s)	917
EciI	GGCGGA	2 cut(s)	734, 887
Ecl136II	GAGCTC	1 cut(s)	1134
Eco130I	CCWWGG	1 cut(s)	1011
Eco24I	GRGCYC	2 cut(s)	68, 1136
Eco31I	GGTCTC	2 cut(s)	869, 1112
Eco47I	GGWCC	5 cut(s)	258, 895, 1023, 1054, 1078
Eco53kI	GAGCTC	1 cut(s)	1134
Eco57I	CTGAAG	2 cut(s)	664, 703
Eco91I	GGTNACC	2 cut(s)	272, 308
EcoICRI	GAGCTC	1 cut(s)	1134
EcoO109I	RGGNCCY	1 cut(s)	1023
EcoO65I	GGTNACC	2 cut(s)	272, 308
EcoRII	CCWGG	6 cut(s)	79, 254, 492, 845, 891, 900
EcoT14I	CCWWGG	1 cut(s)	1011
EcoT38I	GRGCYC	2 cut(s)	68, 1136
ErhI	CCWWGG	1 cut(s)	1011
Esp3I	CGTCTC	1 cut(s)	545
FaeI	CATG	6 cut(s)	637, 727, 818, 955, 1003, 1015
FaiI	YATR	9 cut(s)	141, 635, 725, 816, 828, 953, 1001, 1013, 1175
FalI	AAGNNNNNCTT	2 cut(s)	1107, 1139
FaqI	GGGAC	5 cut(s)	135, 510, 549, 615, 918
FatI	CATG	6 cut(s)	633, 723, 814, 951, 999, 1011
FauI	CCCGC	3 cut(s)	247, 693, 1029
Fnu4HI	GCNGC	2 cut(s)	109, 488
FokI	GGATG	2 cut(s)	221, 536
FriOI	GRGCYC	2 cut(s)	68, 1136
Fsp4HI	GCNGC	2 cut(s)	109, 488
FspBI	CTAG	2 cut(s)	185, 1058
GlaI	GCGC	1 cut(s)	844
GluI	GCNGC	2 cut(s)	109, 488
GsuI	CTGGAG	1 cut(s)	476
HaeII	RGCGCY	1 cut(s)	846
HaeIII	GGCC	9 cut(s)	90, 99, 108, 153, 339, 351, 514, 671, 950
HapII	CCGG	4 cut(s)	12, 243, 429, 693
HgaI	GACGC	4 cut(s)	132, 199, 216, 399
HhaI	GCGC	1 cut(s)	845
Hin1I	GRCGYC	4 cut(s)	124, 391, 538, 675
Hin1II	CATG	6 cut(s)	637, 727, 818, 955, 1003, 1015
Hin6I	GCGC	1 cut(s)	843
HinP1I	GCGC	1 cut(s)	843
HinfI	GANTC	6 cut(s)	35, 246, 294, 432, 444, 563
HpaII	CCGG	4 cut(s)	12, 243, 429, 693
HphI	GGTGA	3 cut(s)	16, 233, 284
Hpy166II	GTNNAC	1 cut(s)	862
Hpy188I	TCNGA	3 cut(s)	40, 49, 836
Hpy188III	TCNNGA	4 cut(s)	20, 542, 982, 1046
Hpy8I	GTNNAC	1 cut(s)	862
Hpy99I	CGWCG	6 cut(s)	53, 210, 272, 677, 920, 1052
HpyAV	CCTTC	5 cut(s)	212, 375, 672, 940, 988
HpyCH4III	ACNGT	2 cut(s)	272, 1082
HpyCH4IV	ACGT	3 cut(s)	538, 675, 1050
HpyCH4V	TGCA	2 cut(s)	589, 943
HpyF10VI	GCNNNNNNNGC	3 cut(s)	96, 105, 239
HpyF3I	CTNAG	6 cut(s)	483, 561, 734, 749, 756, 987
HpySE526I	ACGT	3 cut(s)	538, 675, 1050
Hsp92I	GRCGYC	4 cut(s)	124, 391, 538, 675
Hsp92II	CATG	6 cut(s)	637, 727, 818, 955, 1003, 1015
HspAI	GCGC	1 cut(s)	843
Kzo9I	GATC	1 cut(s)	639
LguI	GCTCTTC	1 cut(s)	917
LmnI	GCTCC	4 cut(s)	55, 384, 495, 1139
Lsp1109I	GCAGC	1 cut(s)	499
LweI	GCATC	2 cut(s)	445, 708
MabI	ACCWGGT	2 cut(s)	254, 891
MaeI	CTAG	2 cut(s)	185, 1058
MaeII	ACGT	3 cut(s)	538, 675, 1050
MaeIII	GTNAC	4 cut(s)	247, 272, 308, 1152
MalI	GATC	1 cut(s)	641
MbiI	CCGCTC	1 cut(s)	482
MboI	GATC	1 cut(s)	639
MboII	GAAGA	3 cut(s)	649, 670, 904
MhlI	GDGCHC	3 cut(s)	68, 1042, 1136
MluI	ACGCGT	1 cut(s)	208
MlyI	GAGTC	4 cut(s)	44, 255, 438, 572
MmeI	TCCRAC	1 cut(s)	72
MseI	TTAA	1 cut(s)	1180
MspI	CCGG	4 cut(s)	12, 243, 429, 693
MspR9I	CCNGG	7 cut(s)	12, 81, 256, 494, 847, 893, 902
Mva1269I	GAATGC	1 cut(s)	814
MvaI	CCWGG	6 cut(s)	81, 256, 494, 847, 893, 902
MvnI	CGCG	1 cut(s)	210
MwoI	GCNNNNNNNGC	3 cut(s)	96, 105, 239
NciI	CCSGG	1 cut(s)	12
NcoI	CCATGG	1 cut(s)	1011
NdeII	GATC	1 cut(s)	639
NlaIII	CATG	6 cut(s)	637, 727, 818, 955, 1003, 1015
NlaIV	GGNNCC	2 cut(s)	740, 1097
NmeAIII	GCCGAG	1 cut(s)	371
NmuCI	GTSAC	3 cut(s)	247, 272, 1152
NspI	RCATGY	1 cut(s)	727
NspV	TTCGAA	1 cut(s)	177
PaeI	GCATGC	1 cut(s)	727
PciSI	GCTCTTC	1 cut(s)	917
PcsI	WCGNNNNNNNCGW	1 cut(s)	870
PctI	GAATGC	1 cut(s)	814
PfeI	GAWTC	2 cut(s)	294, 432
PflFI	GACNNNGTC	2 cut(s)	893, 1052
PkrI	GCNGC	2 cut(s)	110, 489
PleI	GAGTC	4 cut(s)	43, 254, 438, 571
PpsI	GAGTC	4 cut(s)	43, 254, 438, 571
PpuMI	RGGWCCY	1 cut(s)	1023
Psp124BI	GAGCTC	1 cut(s)	1136
Psp5II	RGGWCCY	1 cut(s)	1023
Psp6I	CCWGG	6 cut(s)	79, 254, 492, 845, 891, 900
PspEI	GGTNACC	2 cut(s)	272, 308
PspGI	CCWGG	6 cut(s)	79, 254, 492, 845, 891, 900
PspN4I	GGNNCC	2 cut(s)	740, 1097
PspPI	GGNCC	5 cut(s)	258, 895, 1023, 1054, 1078
PspPPI	RGGWCCY	1 cut(s)	1023
PsrI	GAACNNNNNNTAC	2 cut(s)	1088, 1120
PsyI	GACNNNGTC	2 cut(s)	893, 1052
RsaI	GTAC	3 cut(s)	773, 971, 1106
RsaNI	GTAC	3 cut(s)	772, 970, 1105
SacI	GAGCTC	1 cut(s)	1136
SapI	GCTCTTC	1 cut(s)	917
SaqAI	TTAA	1 cut(s)	1180
SatI	GCNGC	2 cut(s)	109, 488
Sau3AI	GATC	1 cut(s)	639
Sau96I	GGNCC	5 cut(s)	258, 895, 1023, 1054, 1078
SchI	GAGTC	4 cut(s)	44, 255, 438, 572
ScrFI	CCNGG	7 cut(s)	12, 81, 256, 494, 847, 893, 902
SduI	GDGCHC	3 cut(s)	68, 1042, 1136
SexAI	ACCWGGT	2 cut(s)	254, 891
SfaNI	GCATC	2 cut(s)	445, 708
SfcI	CTRYAG	1 cut(s)	1173
SfiI	GGCCNNNNNGGCC	2 cut(s)	96, 105
SfuI	TTCGAA	1 cut(s)	177
SinI	GGWCC	5 cut(s)	258, 895, 1023, 1054, 1078
SmlI	CTYRAG	3 cut(s)	1100, 1129, 1138
SmoI	CTYRAG	3 cut(s)	1100, 1129, 1138
SphI	GCATGC	1 cut(s)	727
SsiI	CCGC	7 cut(s)	109, 240, 480, 686, 745, 898, 1036
SspMI	CTAG	2 cut(s)	185, 1058
SstI	GAGCTC	1 cut(s)	1136
StyD4I	CCNGG	7 cut(s)	10, 79, 254, 492, 845, 891, 900
StyI	CCWWGG	1 cut(s)	1011
TaaI	ACNGT	2 cut(s)	272, 1082
TaiI	ACGT	3 cut(s)	541, 678, 1053
TaqI	TCGA	4 cut(s)	177, 435, 468, 543
TaqII	GACCGA	1 cut(s)	204
TatI	WGTACW	3 cut(s)	771, 969, 1104
TauI	GCSGC	1 cut(s)	111
TfiI	GAWTC	2 cut(s)	294, 432
Tru1I	TTAA	1 cut(s)	1180
Tru9I	TTAA	1 cut(s)	1180
TscAI	CASTG	2 cut(s)	757, 803
TseFI	GTSAC	3 cut(s)	247, 272, 1152
TseI	GCWGC	1 cut(s)	487
Tsp45I	GTSAC	3 cut(s)	247, 272, 1152
TspDTI	ATGAA	4 cut(s)	538, 650, 654, 1019
TspGWI	ACGGA	2 cut(s)	975, 1018
TspRI	CASTG	2 cut(s)	757, 803
Tth111I	GACNNNGTC	2 cut(s)	893, 1052
VpaK11BI	GGWCC	5 cut(s)	258, 895, 1023, 1054, 1078
XceI	RCATGY	1 cut(s)	727
XspI	CTAG	2 cut(s)	185, 1058
ZraI	GACGTC	2 cut(s)	539, 676

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.